Publications and
Presentations |
Alvare, G., Roche-Lima, A. & Fristensky, B. BioLegato: a programmable, object-oriented graphic user interface. BMC Bioinformatics 24, 316 (2023). https://doi.org/10.1186/s12859-023-05436-4Heredia-Negron, F.; Alamo-Rodriguez, N.; Oyola-Velazquez, L.; Nieves, B.; Carrasquillo, K.; Hochheiser, H.; Fristensky, B.; Daluz-Santana, I.; Fernandez-Repollet, E.; Roche-Lima, A. Evaluation of AIML + HDR—A Course to Enhance Data Science Workforce Capacity for Hispanic Biomedical Researchers. Int. J. Environ. Res. Public Health 2023, 20, 2726. https://doi.org/10.3390/ijerph20032726
Fakankun I, Fristensky B, Levin DB (2021) Genome Sequence Analysis of the Oleaginous Yeast, Rhodotorula diobovata, and Comparison of the Carotenogenic and Oleaginous Pathway Genes and Gene Products with Other Oleaginous Yeasts. J. Fungi 7:320. https://doi.org/10.3390/jof7040320
Alvare G, Roche-Lima A, Fristensky B (2020) Installing and Searching BLAST Databases in a Data Science Framework. Bioinformatics: From Algorithms to Applications Saint Petersburg, Russia, July 27-28, 2020. Poster 47
Wushke S, Spicer V, Xhang X-L, Fristensky B, Krokhin OV, Levin DB, Cicek N, Richard Sparling (2016, submitted) Genome and proteome characterization of Caldibacillus debilis GB1 core metabolism under aerobic and anaerobic conditions. BMC Genomics
Fu J, Sharma P, Spicer V, Krokhin OV, Zhang X, Fristensky B, et al. (2015) Quantitative ‘Omics Analyses of Medium Chain Length Polyhydroxyalkanaote Metabolism in Pseudomonas putida LS46 Cultured with Waste Glycerol and Waste Fatty Acids. PLoS ONE 10(11): e0142322. doi:10.1371/journal.pone.0142322
Kohlmeier MG, Yudistira H, Zhang XL, Fristensky B, Levin DB, Sparling R, Oresnik IJ (2015). Draft Genome Sequence of the Bacteriocin-Producing Bradyrhizobium japonicum Strain FN1. Genome Announcements, 3(4), e00812–15. http://doi.org/10.1128/genomeA.00812-15
Fu J, Sharma P, Spicer V, Krokhin O. Zhang X-L, Fristensky B, Wilkins, John , Cicek, Nazim , Sparling, Richard , Levin, David. (2015) Effects of impurities in biodiesel-derived glycerol on growth and expression of heavy metal ion homeostasis genes and gene products in Pseudomonas putida LS46. Appl. Microbiol. and Biotech. 99:5583-5592. (doi:10. 1007/s00253-015-6685-z)
, , , , , , , , and . Thermoanaerobacter thermohydrosulfuricus WC1 shows protein complement stability during the fermentation of key lignocellulose-derived substrates Appl. Environ. Microbiol. 80:1602-1615. published ahead of print 20 December 2013 , doi:10.1128/AEM.03555-13
Seminar: Fristensky B (2013) Moving targets and millions of sequencing reads - Bioinformatics lessons from an international biofuels project Faculty of Agriculture Seminar Series, Oct. 23, 2013. (MP4 Video, 1.05 Gb, 1:06:25)
Roche-Lima, A. (2013) Metabolic Network Inference using Sequence Kernels. Proceedings of International Conference Intelligent Systems for Molecular Biology and European Conference of Computational
Biology. Berlin, Germany. July 19-20, 2013. (http://www.iscb.org/ismbeccb2013)
Roche-Lima, A., Domaratzki, M., Fristensky, B. (2013) Supervised Learning Methods to Infer Metabolic Network using Sequence and Non-sequence Kernels. Proceedings of the International Workshop Machine Learning in System Biology in Conference ISMB/ECCB'13. Berlin, Germany. July 19-20, 2013. (http://www.iscb.org/ismbeccb2013)
Sharma PK, Fu J, Zhang X, Fristensky B, Davenport K, Chain PSG, Sparling R, Levin DB. (2013). Draft Genome Sequence of Medium Chain Length Polyhydroxyalkanoates Producing Pseudomonas putida LS46. Genome Announcements, Apr 18 1(2), e0015113.
Faculty of Agricultural and Food Sciences Seminar Series
University of Manitoba, October 23, 2013
Moving targets and millions of reads - Bioinformatics lessons from an international biofuels project PDF, 5.8 Mb
Department of Computer Science
University of Saskatchewan, Jan. 30, 2012
BioLegato: A Programmable, Object-Oriented Graphic User Interface PDF, 1.4 Mb
10th Annual Asia Pacific Bioinformatics Conference
Melbourne, Australia, Jan. 17 - 19, 2012
BioLegato: A Programmable, Object-Oriented Graphic User Interface PDF, 1.4 Mb
The poster associated with this presentation won a Best Poster Award