Package: FSAP
FSAP - Sequence analysis tools
Documentation
Data
Platforms
:
linux-intel, solaris-sparc, solaris-amd64, linux-x86_64, osx-x86_64, macos-arm64
Installation
:
BIRCH
Programs
:
bachrest - Restriction site search (batch)
d3hom - Dot-matrix DNA similarity, k=3
d4hom - Dot-matrix DNA similarity, k=4
funnel - Reformats a free-format or FASTA-format file to a fixed line-length, preserving comments that begin with a semicolon (;)
gel - Given migration distances for standards of know size, calculate sizes of unknown fragments
intrest - Restriction site search
multidigest - Calculates restriction sites, fragments and fragment ends for multiple enzyme digests, complete or partial
numseq - Sequence dislpay and manipulation
p1hom - Dot-matrix protein similarity, k=1
p2hom - Dot-matrix protein similarity, k=2
testcode - Find protein coding regions using method of Fickett