birch - Package: LAST


LAST - Genome-Scale Sequence Comparison
Documentation
Web site
https://gitlab.com/mcfrith/last
$doc/last/last-tuning.rst
$doc/last/last-matrices.rst
$doc/last/FAQ.rst
$doc/last/last-repeats.rst
$doc/last/last-seeds.rst
LAST Cookbook
$doc/last/last-cookbook.rst
Web site
http://last.cbrc.jp
Tutorial
$local/pkg/last/doc/last-tutorial.html
Installation instructions
$local/pkg/last/doc/last.html
Significance of alignments
$local/pkg/last/doc/last-evalues.html
Optimizing speed, sensitivity and disk space
$local/pkg/last/doc/last-tuning.html
Related publications
$local/pkg/last/doc/last-papers.html
Built-in scoring matrices
$local/pkg/last/doc/last-matrices.html
FAQ
$local/pkg/last/doc/FAQ.html
Repeat masking
$local/pkg/last/doc/last-repeats.html
Seeding schemes for initial matches
$local/pkg/last/doc/last-seeds.html
Data
Platforms:
Installation: BIRCH, local
Programs: