Publications(before 2017):

1.      Blanchard A, Zelinski T, Xie J, Cooper S, Penner C, Leygue L, Myal Y. Identification of claudin 1 transcript variants in human invasive breast cancer. PLOS ONE, 2016, 11(9): e0163387.

2.      Chen YJ, Wu YJ, Xie J. An efficient algorithm for read matching in DNA databases. The Eighth International Conference on Advances in Databases, Knowledge, and Data Applications DBKDA 2016， June 26 - 30, 2016 - Lisbon, Portugal（Best Paper Award).

3.      Sohail M., Xie J. Diverse regulation of 3’ splice site usage. Cell. Mol. Life Sci. (CMLS), 2015, 72(24)4771-4793.

4.      Feng DR, Cheng Y, Meng Y, Zou LP, Huang SZ, Xie, J. Multiple effects of curcumin on promoting expression of the exon 7-containing SMN2 transcript. Genes & Nutrition, 2015, 10(6)40.

5.      Sohail M., Zhang M., Litchfield D., Wang L., Kung S., and Xie J. Differential expression, distinct localization and opposite effects on Golgi structure and cell differentiation by a novel splice variant of human PRMT5. BBA-Molecular Cell Research, 2015, 1853:2444-2452.

6.      Koumbadinga GA, Mahmood N., Lei L., Kan YC, Cao WG, Lobo VG, Yao XJ, Zhang ST and Xie J. Increased stability of heterogeneous ribonucleoproteins by a deacetylase inhibitor. BBA-Gene Regulatory Mechanisms, 2015, 1849(8)1095-1103.

7.      Feng DR, Su RC, Zou L, Triggs-Raine B, Huang S, Xie J. Increase of a group of PTC⁺ transcripts by curcumin through inhibition of the NMD pathway. BBA-Gene Regulatory Mechanisms, 2015, 1849(8)1104-1115.

8.      Sohail M., and Xie J. Evolutionary emergence of a novel splice variant with an opposite effect on cell cycle. Molecular & Cellular Biology, 2015, 35(12): 2203-2214 (RNA Society Poster Award'14).

9.      Mahmood N, and Xie J. An endogenous ‘non-specific’ protein detected by a His-tag antibody is human transcription regulator YY1. Data in Brief, 2015 (2):52-55.

10.  Sohail M., Cao WG, Mahmood N., Myschyshyn M.,  Hong SP, Xie J. Evolutionarily emerged G tracts between the polypyrimidine tract and 3' AG are splicing silencers enriched in genes involved in cancer. BMC Genomics, 2014, 15:1143. |PDF|.

11.  Xie J. Differential evolution of signal-responsive RNA elements and upstream factors that control alternative splicing. Cell. Mol. Life Sci. (CMLS), 2014, 71(22):4347-4360.

12.  Liu GD, Lei L, Yu JK, and Xie J. Refinement of the spectra of exon usage by combined effects of extracellular stimulus and intracellular factors. BBA-Gene Regulatory Mechanisms 2014, 1839(7):537-545.

13.  Feng D, and Xie J. Aberrant splicing in neurological diseases.  Wiley Inter-disciplinary Reviews (WIREs): RNA, 2013, 4:631-649.

14.  Xie J. Making use of aberrant and nonsense: aberrant splicing and nonsense-mediated decay as targets for personalized medicine. Int J Genomic Med (2013) 1: 105.

15.  Razanau A, and Xie J. Emerging mechanisms and consequences of calcium-regulation of alternative splicing in neurons and endocrine cells. Cell. Mol. Life Sci. (CMLS), 2013, 70(23):4527-36.

16.  Cao WG, Razanau A., Feng DR, Lobo VG and Xie J. Control of alternative splicing by forskolin through hnRNP K during neuronal differentiation. Nucleic Acids Res. 2012, 40(16) 8059–8071. |PDF|

17.  Liu GD, Razanau A, Hai Y, Yu JK, Sohail M, Lobo VG, Chu JY, Kung SKP, and Xie J. A conserved serine of hnRNP L mediates depolarization-regulated alternative splicing of potassium channels. J. Biol. Chem. 2012, 287:22709–22716(JBC Most-Read'0712)

18.  Cao WG, Sohail M, Liu G, Koumbadinga GA, Lobo VG, Xie J. Differential effects of PKA-controlled CaMKK2 variants on neuronal differentiation. RNA Biology, 2011, 8(6):1061-1072.|PDF|

19.  Li HZ, Liu GD, Yu JK, Cao WG, Lobo VG, Xie J. In vivo selection of kinase-responsive RNA elements controlling alternative splicing. J. Biol. Chem. 2009, 284:16191-16201.

20.  Yu JK, Hai Y, Liu GD, Fang TL, Kung SKP, Xie J. The heterogeneous nuclear ribonucleoprotein L is an essential component in the Ca⁺⁺/calmodulin-dependent protein kinase IV-regulated alternative splicing through cytidine-adenosine repeats. J. Biol. Chem. 2009, 284:1505-1513.

21.  Hai, Y., Cao, W.G., Liu, G.D., Hong, S., Abou Elela, S., Klinck, R., Chu, J.Y., Xie, J. A G-tract element in apoptotic agents-induced alternative splicing. Nucleic Acids Res. 2008, 36(10):3320-3331. |PDF|

22.  Xie, J. Control of alternative pre-mRNA splicing by calcium signals. BBA-Gene Regulatory Mechanisms, 2008, 1779(8):438-452. |PDF|

23.  Xie Y, Yang H, Miller JH, Shih DM, Hicks GG, Xie J, Shiu RP: Cells deficient in oxidative DNA damage repair genes Myh and Ogg1 are sensitive to oxidants with increased G2/M arrest and multinucleation. Carcinogenesis 2008, 29:722-728.

24.  Ma, S., Liu, G., Sun, Y. & Xie, J. Relocalization of the polypyrimidine tract binding protein during PKA-induced neurite growth. BBA-Molecular Cell Research, 2007 June 1773(6):912-923. |PDF|

25.  Edirimanne VE, Woo CW, Siow YL, Pierce GN, Xie J., O K: Homocysteine stimulates NADPH oxidase-mediated superoxide production leading to endothelial dysfunction in rats. Can J Physiol Pharmacol 2007, 85:1236-1247.

26.  Lee JA, Xing Y, Nguyen D, Xie J, Lee CJ, Black DL: Depolarization and CaM kinase IV modulate NMDA receptor splicing through two essential RNA elements. PLoS Biol.2007, 5:e40.

27.  Coutinho G, Xie J., Du LT, Brusco A, Krainer AR, Gatti RA: Functional significance of deep intronic mutation in the ATM gene and evidence for an alternative Exon 28a.Human Mutation 2005, 25:118-124.

28.  Xie J, Jan C, Stoilov P, Park J, Black DL. A consensus CaMK IV-responsive RNA sequence mediates regulation of alternative exons in neurons. RNA, 2005 Dec 11(12):1825-1834.

29.  Li CY, Chu JY, Yu JK, Huang XQ, Liu XJ, Shi L, Che YC, Xie J. Regulation of alternative splicing of Bcl-x by IL-6, GM-CSF and TPA. Cell Research 2004, 14:473-479.

30.  Xie J, Lee JA, Kress TL, Mowry KL, Black DL. Protein Kinase A Phosphorylation Modulates Transport of the Polypyrimidine Tract-Binding Protein. PNAS, 2003 July 22;100(15):8776-8781

31.  Xie J & Black DL. A CaMK IV responsive RNA element mediates depolarization-induced alternative splicing of ion channels. Nature(London). 2001 Apr 19;410(6831):936-939.

32.  Xie J & McCobb DP. Control of alternative splicing of potassium channels by stress hormones. Science(WashingtonDC). 1998 Apr 17;280(5362):443-6.