BIRCH: GDE Interfaces*

GDE is a program that launches other programs. When GDE is starts up,  it reads a  file called .GDEmenus, specifiyng a set of programs that GDE can call, and the menus for setting parameters. BIRCH has .GDEmenus files for four different data types, resulting in four different GDE interfaces.


GDE - Sequence Data




dGDE - List Data (eg. Accession numbers, TaxID numbers, GI numbers)



mGDE - Marker Data



tGDE - Phylogenetic Tree Data


* BIRCH uses MacGDE, Steven Smith's GDE updated by Eric Linton, Michigan State University. MacGDE has been re-compiled for Solaris and Linux.


http://home.cc.umanitoba.ca/~frist/Seminars/pag14/pag14.html

 
FRISTENSKY LAB
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