category: BIRCH - Administration

programs:

• birchconfig - BIRCH install wizard
• birchdb - BIRCH documentation database
• birchhome.sh - modify paths in BIRCH parameter files for local BIRCH system
• birchstats - Report statistics on BIRCH usage
• customdoc.py - String substitution for HTML files
• dat2ace.py - Create ACeDB file objects for all data files in a directory
• doc2ace.py - Create ACeDB file objects for all documenataion files in a directory
• fil.py - create .fil files for use by FASTA
• gbupdate - download and update GenBank flatfile database
• htmldoc.py - Create BIRCH HTML documentation from BIRCH and local databases
• l-gbirchdb - >>>>It is used for editing the copy of lbirchdb in local-generic. When a NEW BIRCH install is done, this empty database becomes the lbirchdb database.
• lbirchdb - Database for local documentation
• lgbirchdb - Empty database to be used for local-installed documentation
• makemenus.py - (deprecated) Create .GDEmenus files for all platforms
• pirupdate - download and update PIR flatfile database
• UNINSTALL-birch.sh - Uninstall a BIRCH system