birchenv.py - API methods for setting environment variables and platform detection
birchlib.py - Library functions for BIRCH utilities
birchscript.py - Library methods for BIRCH install-scripts
blgeneric - run BioLegato with no menus and no canvas (for demonstration purposes)
bltable - Simple spreadsheet for generic data
browser.csh - Launch a default browser from another application
btail.py - Print the contents of a file beginning at line x
chooseviewer.py - choose a program for viewing a file
ConfirmBox2 - Opens a popup box with a question and Yes and No buttons.
delgi.py - remove GI numbers from GenBank flatfiles, in compliance with the NCBI phase out of GI numbers
DirChooser2 - Opens a file chooser, and prints the fully-qualified path of the selected directory.
ErrorBox2 - Opens a popup error box with a message and an Okay button.
guesspairs.py - Given a list of sequencing read files, make a guess as to which pairs of files should be grouped together as left and right read files
makelinks.sh - Create symbolic links in the current directory, pointing to files in a source directory
OkayBox2 - Opens a popup box with a message and an Okay button.
phylip.py - Classes used by Python scripts that run Phylip programs
pigz - A parallel implementation of gzip for modern multi-processor, multi-core machines
pyc.py - compile a Python script into bytecode and creates pydoc HTML documentation
rmlauncher.py - removes platform-specific BIRCH launcher from user's desktop
ruler - Print a text ruler for use in numbering columns