blastdbkit.py blastdbkit.py| blastdbkit.py - Install and update local BLAST databases | |
| Launching the program | |
|
command
|
blastdbkit.py --configure [ --birchdir directory --blastdb directory ] |
|
command
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blastdbkit.py --reportlocal |
|
command
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blastdbkit.py --reportftp [--ftpsite url ] |
|
command
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blastdbkit.py --add [ --ftpsite url ] --dblist db[,db] |
|
command
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blastdbkit.py --delete --dblist db[,db] |
|
command
|
blastdbkit.py --updatedb [ --ftpsite url ] --dblist db[,db] |
|
birchadmin
|
UpdateAddInstall --> BlastDB |
| Documentation | |
|
Manual
|
$doc/bioLegato/blastdbkit.html |
|
Tutorial
|
$doc/BIRCH/birchadmin/blastdb/BLASTDB.html |
|
Technical reference
|
$doc/BIRCH/birchadmin/blastdb/BLASTDBTechnical.html |
|
Pydoc documentation
|
$doc/bioLegato/blastdbkit.pydoc.html |
| Data | |
| Sample input | |
| Sample output | |
| Package: bioLegato | |
| Platforms: linux-intel, linux-x86_64, osx-x86_64 | |