Index of /~psgendb/birchhomedir/BIRCHDEV/doc/pkg/last-1512/src

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory   -  
[TXT]lastal.cc 2023-10-09 17:54 59K 
[TXT]LastalArguments.cc 2023-10-09 17:54 25K 
[TXT]AlignmentWrite.cc 2023-10-09 17:54 22K 
[TXT]last-pair-probs.cc 2023-10-09 17:54 20K 
[TXT]SubsetSuffixArraySor..>2023-10-09 17:54 20K 
[TXT]Centroid.cc 2023-10-09 17:54 18K 
[TXT]lastdb.cc 2023-10-09 17:54 18K 
[TXT]makefile 2023-10-09 17:54 17K 
[TXT]tantan.cc 2023-10-09 17:54 17K 
[TXT]SubsetSuffixArraySea..>2023-10-09 17:54 16K 
[TXT]Alignment.cc 2023-10-09 17:54 15K 
[TXT]mcf_frameshift_xdrop..>2023-10-09 17:54 15K 
[TXT]GappedXdropAligner.hh 2023-10-09 17:54 14K 
[TXT]ScoreMatrix.cc 2023-10-09 17:54 13K 
[TXT]mcf_simd.hh 2023-10-09 17:54 13K 
[TXT]ScoreMatrixData.hh 2023-11-10 10:04 12K 
[TXT]LastEvaluer.cc 2023-10-09 17:54 12K 
[TXT]SubsetSuffixArray.hh 2023-10-09 17:54 11K 
[TXT]CyclicSubsetSeedData.hh2023-11-10 10:04 11K 
[TXT]GappedXdropAligner3f..>2023-10-09 17:54 10K 
[TXT]SubsetSuffixArray.cc 2023-10-09 17:54 9.5K 
[TXT]GappedXdropAligner.cc 2023-10-09 17:54 8.8K 
[TXT]GeneticCodeData.hh 2023-11-10 10:05 8.5K 
[TXT]GappedXdropAlignerDn..>2023-10-09 17:54 8.3K 
[TXT]MultiSequence.hh 2023-10-09 17:54 8.3K 
[TXT]CyclicSubsetSeed.hh 2023-10-09 17:54 7.4K 
[TXT]Alignment.hh 2023-10-09 17:54 6.9K 
[TXT]LastdbArguments.cc 2023-10-09 17:54 6.8K 
[TXT]GappedXdropAlignerFr..>2023-10-09 17:54 6.5K 
[TXT]LambdaCalculator.cc 2023-10-09 17:54 6.3K 
[TXT]GeneticCode.cc 2023-10-09 17:54 6.3K 
[TXT]TwoQualityScoreMatri..>2023-10-09 17:54 6.0K 
[TXT]CyclicSubsetSeed.cc 2023-10-09 17:54 6.0K 
[TXT]Centroid.hh 2023-10-09 17:54 5.9K 
[TXT]MultiSequenceQual.cc 2023-10-09 17:54 5.8K 
[TXT]LastEvaluerData.hh 2023-10-09 17:54 5.8K 
[TXT]GreedyXdropAligner.cc 2023-10-09 17:54 5.5K 
[TXT]GappedXdropAlignerPs..>2023-10-09 17:54 5.4K 
[TXT]GappedXdropAligner2q..>2023-10-09 17:54 5.3K 
[TXT]GappedXdropAligner3f..>2023-10-09 17:54 5.0K 
[TXT]MultiSequence.cc 2023-10-09 17:54 4.9K 
[TXT]tantan.hh 2023-10-09 17:54 4.6K 
[TXT]last-pair-probs-main.cc2023-10-09 17:54 4.4K 
[TXT]LastEvaluer.hh 2023-10-09 17:54 4.3K 
[TXT]GappedXdropAlignerIn..>2023-10-09 17:54 4.3K 
[TXT]gaplessXdrop.hh 2023-10-09 17:54 4.3K 
[TXT]mcf_gap_costs.cc 2023-10-09 17:54 4.2K 
[TXT]SegmentPairPot.cc 2023-10-09 17:54 4.2K 
[TXT]mcf_frameshift_xdrop..>2023-10-09 17:54 4.1K 
[TXT]LastalArguments.hh 2023-10-09 17:54 3.9K 
[TXT]OneQualityScoreMatri..>2023-10-09 17:54 3.9K 
[TXT]gaplessTwoQualityXdr..>2023-10-09 17:54 3.8K 
[TXT]mcf_substitution_mat..>2023-10-09 17:54 3.8K 
[TXT]OneQualityScoreMatri..>2023-10-09 17:54 3.5K 
[TXT]Alphabet.cc 2023-10-09 17:54 3.5K 
[TXT]QualityPssmMaker.cc 2023-10-09 17:54 3.4K 
[TXT]mcf_packed_array.hh 2023-10-09 17:54 3.4K 
[TXT]GeneticCode.hh 2023-10-09 17:54 3.4K 
[TXT]TwoQualityScoreMatri..>2023-10-09 17:54 3.3K 
[TXT]Alphabet.hh 2023-10-09 17:54 3.0K 
[TXT]gaplessPssmXdrop.hh 2023-10-09 17:54 3.0K 
[TXT]dna_words_finder.hh 2023-10-09 17:54 3.0K 
[TXT]SegmentPairPot.hh 2023-10-09 17:54 2.8K 
[TXT]last.hh 2023-10-09 17:54 2.8K 
[TXT]last-merge-batches.c 2023-10-09 17:54 2.6K 
[TXT]mcf_substitution_mat..>2023-10-09 17:54 2.6K 
[TXT]QualityPssmMaker.hh 2023-10-09 17:54 2.5K 
[TXT]ScoreMatrix.hh 2023-10-09 17:54 2.5K 
[TXT]LambdaCalculator.hh 2023-10-09 17:54 2.4K 
[TXT]mcf_gap_costs.hh 2023-10-09 17:54 2.3K 
[TXT]Mmap.hh 2023-10-09 17:54 2.3K 
[TXT]qualityScoreUtil.hh 2023-10-09 17:54 2.3K 
[TXT]GreedyXdropAligner.hh 2023-10-09 17:54 2.2K 
[TXT]AlignmentPot.hh 2023-10-09 17:54 2.1K 
[TXT]mcf_alignment_path_a..>2023-10-09 17:54 1.9K 
[TXT]fileMap.cc 2023-10-09 17:54 1.8K 
[TXT]DiagonalTable.hh 2023-10-09 17:54 1.7K 
[TXT]LastdbArguments.hh 2023-10-09 17:54 1.6K 
[TXT]last-pair-probs.hh 2023-10-09 17:54 1.6K 
[TXT]mcf_alignment_path_a..>2023-10-09 17:54 1.6K 
[TXT]mcf_zstream.hh 2023-10-09 17:54 1.6K 
[TXT]SequenceFormat.hh 2023-10-09 17:54 1.6K 
[TXT]dna_words_finder.cc 2023-10-09 17:54 1.6K 
[TXT]stringify.hh 2023-10-09 17:54 1.5K 
[TXT]TantanMasker.cc 2023-10-09 17:54 1.4K 
[TXT]TantanMasker.hh 2023-10-09 17:54 1.4K 
[TXT]SegmentPair.hh 2023-10-09 17:54 1.3K 
[TXT]mcf_big_seq.hh 2023-10-09 17:54 1.3K 
[TXT]SubsetMinimizerFinde..>2023-10-09 17:54 1.2K 
[TXT]SubsetMinimizerFinde..>2023-10-09 17:54 1.2K 
[TXT]mcf_reverse_queue.hh 2023-10-09 17:54 1.1K 
[TXT]io.hh 2023-10-09 17:54 1.0K 
[TXT]zio.hh 2023-10-09 17:54 970  
[TXT]ScoreMatrixRow.hh 2023-10-09 17:54 919  
[TXT]cbrc_linalg.cc 2023-10-09 17:54 827  
[TXT]VectorOrMmap.hh 2023-10-09 17:54 820  
[TXT]threadUtil.hh 2023-10-09 17:54 778  
[TXT]AlignmentPot.cc 2023-10-09 17:54 703  
[TXT]cbrc_linalg.hh 2023-10-09 17:54 643  
[TXT]SegmentPair.cc 2023-10-09 17:54 633  
[TXT]fileMap.hh 2023-10-09 17:54 613  
[TXT]mcf_contiguous_queue.hh2023-10-09 17:54 590  
[TXT]getoptUtil.hh 2023-10-09 17:54 295  
[TXT]version.hh 2023-11-10 10:04 7  
[DIR]split/ 2023-11-13 13:32 -  
[DIR]alp/ 2023-11-13 13:32 -