H CROG050101
D Substitution matrix computed from the Dirichlet Mixture Model
(Crooks-Brenner, 2005)
R PMID:15531614
A Crooks, G.E. and Brenner, S.E.
T An alternative model of amino acid replacement
J Bioinformatics 21, 975-980 (2005)
M rows = ARNDCQEGHILKMFPSTWYV, cols = ARNDCQEGHILKMFPSTWYV
4
-2       6
-2      -1       7
-2      -1       1       7
0      -4      -3      -4      12
-1       1       0       0      -3       6
-1       0       0       1      -4       1       5
-1      -3      -1      -1      -3      -2      -2       7
-2       0       0      -1      -3       0      -1      -2       9
-2      -3      -5      -6      -1      -3      -4      -6      -3       5
-2      -3      -4      -5      -2      -3      -4      -5      -3       2       5
-2       2       0       0      -4       1       1      -2      -1      -4      -3       5
-1      -2      -3      -4      -1      -2      -3      -4      -2       1       2      -2       7
-2      -3      -4      -5      -2      -3      -4      -5      -1       0       1      -4       1       7
-1      -2      -2      -1      -3      -1      -1      -2      -2      -4      -3      -1      -3      -3       8
0      -1       0       0      -2       0      -1      -1      -1      -4      -3      -1      -2      -3      -1       4
-1      -1      -1      -1      -1      -1      -1      -2      -1      -2      -2      -1      -1      -2      -2       1       5
-3      -2      -3      -4      -2      -2      -3      -4       0      -1      -1      -3       0       3      -3      -3      -2      12
-2      -2      -2      -3      -2      -2      -3      -4       0      -1      -1      -3       0       3      -3      -2      -2       3       8
-1      -3      -4      -5       0      -3      -4      -5      -3       3       1      -3       1       0      -3      -3      -1      -2      -2       5
//