H MUET020102
D Substitution matrix (VTML250) obtained by maximum likelihood estimation
(Mueller et al., 2002)
R 11752185
A Mueller, T., Spang, R. and Vingron, M.
T Estimating amino acid substitution models: A comparison of Dayhoff's
estimator, the resolvent approach and a maximum likelihood method
J Molecular Biology and Evolution 19, 8-13 (2002)
M rows = ARNDCQEGHILKMFPSTWYV, cols = ARNDCQEGHILKMFPSTWYV
2
-1       5
0       0       4
0      -1       2       5
1      -2      -1      -3      11
0       2       1       1      -2       3
0       0       1       3      -3       2       4
1      -1       0       0      -1      -1      -1       7
-1       1       1       0      -1       1       0      -1       6
-1      -2      -3      -4       0      -2      -3      -4      -2       4
-1      -2      -3      -4      -2      -2      -3      -4      -2       3       4
-1       3       1       0      -2       2       1      -1       0      -2      -2       3
-1      -1      -2      -3       0      -1      -2      -3      -2       2       3      -1       4
-2      -3      -3      -5      -2      -2      -4      -4       0       1       2      -3       1       7
0      -1      -1       0      -2       0       0      -1      -1      -3      -2       0      -2      -3       7
1       0       1       0       1       0       0       0       0      -2      -2       0      -1      -2       0       2
1      -1       0       0       0       0       0      -1       0       0      -1       0       0      -2       0       1       3
-3      -3      -4      -5      -4      -4      -5      -4       0      -1       0      -3      -2       3      -3      -3      -4      14
-2      -2      -1      -3       0      -2      -2      -4       2      -1       0      -2      -1       5      -4      -1      -2       4       8
0      -2      -2      -3       1      -2      -2      -3      -2       3       2      -2       2       0      -2      -1       0      -3      -1       3
//