#!/bin/ksh
#
# Description:
#   Tests loading a dot-matrix plot from file for a long sequence versus itself.
#
# Results:
#   Dotter's graphical display should start up, showing the dot-plot. It should start
#   almost instantly - much quicker than the same test where the plot is calculated
#   from the input sequences (test2). You should be able to interact with the plot as
#   if it were created from the original sequences, including being able to change
#   the contrast using the greyramp tool.
#

RC=0

test_name=`basename $0`
test_dir=`dirname $0`
data_dir=$test_dir/../../../data

dotter -l $data_dir/chr4_vs_chr4.dot -q 246634 -s 246634 -f $data_dir/chr4_dna_align.gff $data_dir/chr4_ref_seq.fasta $data_dir/chr4_ref_seq.fasta

# If there was an error, set RC
if [ $? -ne 0 ] 
then
  RC=1
fi

exit $RC