/* config.h.in. Generated from configure.ac by autoheader. */ /* Define if building universal (internal helper macro) */ #undef AC_APPLE_UNIVERSAL_BUILD /* Define to disable declaration of std::tr1::tuple by boost */ #undef BOOST_HAS_TR1_TUPLE /* Width of bits of the FM-index in bits */ #undef FMBITS /* Define to 1 if you have the header file. */ #undef HAVE_BOOST_FUNCTIONAL_HASH_HPP /* Define to 1 if you have the header file. */ #undef HAVE_BOOST_PROPERTY_MAP_PROPERTY_MAP_HPP /* Define to 1 if you have the header file. */ #undef HAVE_BOOST_UNORDERED_SET_HPP /* Define to 1 if you have the header file. */ #undef HAVE_DLFCN_H /* Define to 1 if you don't have `vprintf' but do have `_doprnt.' */ #undef HAVE_DOPRNT /* Define to 1 if you have the `dup2' function. */ #undef HAVE_DUP2 /* Define to 1 if you have the header file. */ #undef HAVE_FCNTL_H /* Define to 1 if you have the header file. */ #undef HAVE_FLOAT_H /* Define to 1 if you have the `fork' function. */ #undef HAVE_FORK /* Define to 1 if you have the header file. */ #undef HAVE_FUNCTIONAL /* Define to 1 if you have the `gethostname' function. */ #undef HAVE_GETHOSTNAME /* Define to 1 if you have the `getopt_long' function. */ #undef HAVE_GETOPT_LONG /* Define to 1 if you have the `getpagesize' function. */ #undef HAVE_GETPAGESIZE /* Define to 1 if you have the header file. */ #undef HAVE_GOOGLE_SPARSE_HASH_MAP /* Define to 1 if you have the header file. */ #undef HAVE_INTTYPES_H /* Define to 1 if you have the `dl' library (-ldl). */ #undef HAVE_LIBDL /* Define to 1 if you have the `lam' library (-llam). */ #undef HAVE_LIBLAM /* Define to 1 if you have the `lammpi++' library (-llammpi++). */ #undef HAVE_LIBLAMMPI__ /* Define to 1 if you have the `m' library (-lm). */ #undef HAVE_LIBM /* Define to 1 if you have the `mpi' library (-lmpi). */ #undef HAVE_LIBMPI /* Define to 1 if you have the `mpich' library (-lmpich). */ #undef HAVE_LIBMPICH /* Define to 1 if you have the `mpl' library (-lmpl). */ #undef HAVE_LIBMPL /* Define to 1 if you have the `pthread' library (-lpthread). */ #undef HAVE_LIBPTHREAD /* Define to 1 if you have the `sqlite3' library (-lsqlite3). */ #undef HAVE_LIBSQLITE3 /* Define to 1 if you have the header file. */ #undef HAVE_LIMITS_H /* Define to 1 if your system has a GNU libc compatible `malloc' function, and to 0 otherwise. */ #undef HAVE_MALLOC /* Define to 1 if you have the header file. */ #undef HAVE_MEMORY_H /* Define to 1 if you have the `memset' function. */ #undef HAVE_MEMSET /* Define to 1 if you have the header file. */ #undef HAVE_MPI_H /* Define to 0 if you do not have popcnt. */ #undef HAVE_POPCNT /* Define to 1 if you have the `pow' function. */ #undef HAVE_POW /* Have PTHREAD_PRIO_INHERIT. */ #undef HAVE_PTHREAD_PRIO_INHERIT /* Define to 1 if the system has the type `ptrdiff_t'. */ #undef HAVE_PTRDIFF_T /* Define to 1 if your system has a GNU libc compatible `realloc' function, and to 0 otherwise. */ #undef HAVE_REALLOC /* Define to 1 if you have the header file. */ #undef HAVE_SQLITE3_H /* Define to 1 if you have the `sqrt' function. */ #undef HAVE_SQRT /* Define to 1 if stdbool.h conforms to C99. */ #undef HAVE_STDBOOL_H /* Define to 1 if you have the header file. */ #undef HAVE_STDDEF_H /* Define to 1 if you have the header file. */ #undef HAVE_STDINT_H /* Define to 1 if you have the header file. */ #undef HAVE_STDLIB_H /* Define if the system provides std::hash */ #undef HAVE_STD_HASH /* Define if the system provides std::tr1::hash */ #undef HAVE_STD_TR1_HASH /* Define if the system provides std::tr1::tuple */ #undef HAVE_STD_TR1_TUPLE /* Define to 1 if you have the `strdup' function. */ #undef HAVE_STRDUP /* Define to 1 if you have the `strerror' function. */ #undef HAVE_STRERROR /* Define to 1 if you have the header file. */ #undef HAVE_STRINGS_H /* Define to 1 if you have the header file. */ #undef HAVE_STRING_H /* Define to 1 if you have the `strtoul' function. */ #undef HAVE_STRTOUL /* Define to 1 if you have the header file. */ #undef HAVE_SYS_PARAM_H /* Define to 1 if you have the header file. */ #undef HAVE_SYS_STAT_H /* Define to 1 if you have the header file. */ #undef HAVE_SYS_TYPES_H /* Define to 1 if you have the header file. */ #undef HAVE_TR1_FUNCTIONAL /* Define to 1 if you have the header file. */ #undef HAVE_TR1_UNORDERED_MAP /* Define to 1 if you have the header file. */ #undef HAVE_TR1_UNORDERED_SET /* Define to 1 if you have the header file. */ #undef HAVE_UNISTD_H /* Define to 1 if you have the header file. */ #undef HAVE_UNORDERED_MAP /* Define to 1 if you have the header file. */ #undef HAVE_UNORDERED_SET /* Define to 1 if you have the `vfork' function. */ #undef HAVE_VFORK /* Define to 1 if you have the header file. */ #undef HAVE_VFORK_H /* Define to 1 if you have the `vprintf' function. */ #undef HAVE_VPRINTF /* Define to 1 if `fork' works. */ #undef HAVE_WORKING_FORK /* Define to 1 if `vfork' works. */ #undef HAVE_WORKING_VFORK /* Define to 1 if the system has the type `_Bool'. */ #undef HAVE__BOOL /* Define if the system does not provide HOST_NAME_MAX */ #undef HOST_NAME_MAX /* maximum Bloom filter hash functions */ #undef MAX_HASHES /* maximum k-mer length */ #undef MAX_KMER /* Define to disable MPICH C++ bindings */ #undef MPICH_SKIP_MPICXX /* Define to disable OpenMPI C++ bindings */ #undef OMPI_SKIP_MPICXX /* Name of package */ #undef PACKAGE /* Define to the address where bug reports for this package should be sent. */ #undef PACKAGE_BUGREPORT /* Define to the full name of this package. */ #undef PACKAGE_NAME /* Define to the full name and version of this package. */ #undef PACKAGE_STRING /* Define to the one symbol short name of this package. */ #undef PACKAGE_TARNAME /* Define to the version of this package. */ #undef PACKAGE_VERSION /* Define to necessary symbol if this constant uses a non-standard name on your system. */ #undef PTHREAD_CREATE_JOINABLE /* Define to 1 if you have the ANSI C header files. */ #undef STDC_HEADERS /* Version number of package */ #undef VERSION /* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most significant byte first (like Motorola and SPARC, unlike Intel). */ #if defined AC_APPLE_UNIVERSAL_BUILD # if defined __BIG_ENDIAN__ # define WORDS_BIGENDIAN 1 # endif #else # ifndef WORDS_BIGENDIAN # undef WORDS_BIGENDIAN # endif #endif /* Define to 1 if you have sqlite lib/header */ #undef _SQL /* Define for Solaris 2.5.1 so the uint32_t typedef from , , or is not used. If the typedef were allowed, the #define below would cause a syntax error. */ #undef _UINT32_T /* Define for Solaris 2.5.1 so the uint64_t typedef from , , or is not used. If the typedef were allowed, the #define below would cause a syntax error. */ #undef _UINT64_T /* Define for Solaris 2.5.1 so the uint8_t typedef from , , or is not used. If the typedef were allowed, the #define below would cause a syntax error. */ #undef _UINT8_T /* Define if the system does not provide ceilf */ #undef ceilf /* Define to empty if `const' does not conform to ANSI C. */ #undef const /* Define to `__inline__' or `__inline' if that's what the C compiler calls it, or to nothing if 'inline' is not supported under any name. */ #ifndef __cplusplus #undef inline #endif /* Define to the type of a signed integer type of width exactly 64 bits if such a type exists and the standard includes do not define it. */ #undef int64_t /* Define to rpl_malloc if the replacement function should be used. */ #undef malloc /* Define to `int' if does not define. */ #undef mode_t /* Define to `int' if does not define. */ #undef pid_t /* Define to rpl_realloc if the replacement function should be used. */ #undef realloc /* Define to `unsigned int' if does not define. */ #undef size_t /* Define to `int' if does not define. */ #undef ssize_t /* Define to the type of an unsigned integer type of width exactly 16 bits if such a type exists and the standard includes do not define it. */ #undef uint16_t /* Define to the type of an unsigned integer type of width exactly 32 bits if such a type exists and the standard includes do not define it. */ #undef uint32_t /* Define to the type of an unsigned integer type of width exactly 64 bits if such a type exists and the standard includes do not define it. */ #undef uint64_t /* Define to the type of an unsigned integer type of width exactly 8 bits if such a type exists and the standard includes do not define it. */ #undef uint8_t /* Define as `fork' if `vfork' does not work. */ #undef vfork