# CMAKE generated file: DO NOT EDIT! # Generated by "Unix Makefiles" Generator, CMake Version 3.20 # Delete rule output on recipe failure. .DELETE_ON_ERROR: #============================================================================= # Special targets provided by cmake. # Disable implicit rules so canonical targets will work. .SUFFIXES: # Disable VCS-based implicit rules. % : %,v # Disable VCS-based implicit rules. % : RCS/% # Disable VCS-based implicit rules. % : RCS/%,v # Disable VCS-based implicit rules. % : SCCS/s.% # Disable VCS-based implicit rules. % : s.% .SUFFIXES: .hpux_make_needs_suffix_list # Command-line flag to silence nested $(MAKE). $(VERBOSE)MAKESILENT = -s #Suppress display of executed commands. $(VERBOSE).SILENT: # A target that is always out of date. cmake_force: .PHONY : cmake_force #============================================================================= # Set environment variables for the build. # The shell in which to execute make rules. SHELL = /bin/sh # The CMake executable. CMAKE_COMMAND = /usr/bin/cmake # The command to remove a file. RM = /usr/bin/cmake -E rm -f # Escaping for special characters. EQUALS = = # The top-level source directory on which CMake was run. CMAKE_SOURCE_DIR = /home/psgendb/BIRCHDEV/install/salmon-1.10.1 # The top-level build directory on which CMake was run. CMAKE_BINARY_DIR = /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build # Include any dependencies generated for this target. include src/CMakeFiles/salmon.dir/depend.make # Include any dependencies generated by the compiler for this target. include src/CMakeFiles/salmon.dir/compiler_depend.make # Include the progress variables for this target. include src/CMakeFiles/salmon.dir/progress.make # Include the compile flags for this target's objects. include src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/EMUtils.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/EMUtils.cpp.o: ../src/EMUtils.cpp src/CMakeFiles/salmon.dir/EMUtils.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_1) "Building CXX object src/CMakeFiles/salmon.dir/EMUtils.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/EMUtils.cpp.o -MF CMakeFiles/salmon.dir/EMUtils.cpp.o.d -o CMakeFiles/salmon.dir/EMUtils.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/EMUtils.cpp src/CMakeFiles/salmon.dir/EMUtils.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/EMUtils.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/EMUtils.cpp > CMakeFiles/salmon.dir/EMUtils.cpp.i src/CMakeFiles/salmon.dir/EMUtils.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/EMUtils.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/EMUtils.cpp -o CMakeFiles/salmon.dir/EMUtils.cpp.s src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o: ../src/CollapsedEMOptimizer.cpp src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_2) "Building CXX object src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o -MF CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o.d -o CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedEMOptimizer.cpp src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedEMOptimizer.cpp > CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.i src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedEMOptimizer.cpp -o CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.s src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o: ../src/CollapsedCellOptimizer.cpp src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_3) "Building CXX object src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o -MF CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o.d -o CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedCellOptimizer.cpp src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedCellOptimizer.cpp > CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.i src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedCellOptimizer.cpp -o CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.s src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o: ../src/CollapsedGibbsSampler.cpp src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_4) "Building CXX object src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o -MF CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o.d -o CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedGibbsSampler.cpp src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedGibbsSampler.cpp > CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.i src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/CollapsedGibbsSampler.cpp -o CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.s src/CMakeFiles/salmon.dir/Salmon.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/Salmon.cpp.o: ../src/Salmon.cpp src/CMakeFiles/salmon.dir/Salmon.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_5) "Building CXX object src/CMakeFiles/salmon.dir/Salmon.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/Salmon.cpp.o -MF CMakeFiles/salmon.dir/Salmon.cpp.o.d -o CMakeFiles/salmon.dir/Salmon.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Salmon.cpp src/CMakeFiles/salmon.dir/Salmon.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/Salmon.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Salmon.cpp > CMakeFiles/salmon.dir/Salmon.cpp.i src/CMakeFiles/salmon.dir/Salmon.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/Salmon.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Salmon.cpp -o CMakeFiles/salmon.dir/Salmon.cpp.s src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o: ../src/BuildSalmonIndex.cpp src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_6) "Building CXX object src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o -MF CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o.d -o CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/BuildSalmonIndex.cpp src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/BuildSalmonIndex.cpp > CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.i src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/BuildSalmonIndex.cpp -o CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.s src/CMakeFiles/salmon.dir/Graph.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/Graph.cpp.o: ../src/Graph.cpp src/CMakeFiles/salmon.dir/Graph.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_7) "Building CXX object src/CMakeFiles/salmon.dir/Graph.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/Graph.cpp.o -MF CMakeFiles/salmon.dir/Graph.cpp.o.d -o CMakeFiles/salmon.dir/Graph.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Graph.cpp src/CMakeFiles/salmon.dir/Graph.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/Graph.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Graph.cpp > CMakeFiles/salmon.dir/Graph.cpp.i src/CMakeFiles/salmon.dir/Graph.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/Graph.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Graph.cpp -o CMakeFiles/salmon.dir/Graph.cpp.s src/CMakeFiles/salmon.dir/DedupUMI.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/DedupUMI.cpp.o: ../src/DedupUMI.cpp src/CMakeFiles/salmon.dir/DedupUMI.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_8) "Building CXX object src/CMakeFiles/salmon.dir/DedupUMI.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/DedupUMI.cpp.o -MF CMakeFiles/salmon.dir/DedupUMI.cpp.o.d -o CMakeFiles/salmon.dir/DedupUMI.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/DedupUMI.cpp src/CMakeFiles/salmon.dir/DedupUMI.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/DedupUMI.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/DedupUMI.cpp > CMakeFiles/salmon.dir/DedupUMI.cpp.i src/CMakeFiles/salmon.dir/DedupUMI.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/DedupUMI.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/DedupUMI.cpp -o CMakeFiles/salmon.dir/DedupUMI.cpp.s src/CMakeFiles/salmon.dir/Alevin.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/Alevin.cpp.o: ../src/Alevin.cpp src/CMakeFiles/salmon.dir/Alevin.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_9) "Building CXX object src/CMakeFiles/salmon.dir/Alevin.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/Alevin.cpp.o -MF CMakeFiles/salmon.dir/Alevin.cpp.o.d -o CMakeFiles/salmon.dir/Alevin.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Alevin.cpp src/CMakeFiles/salmon.dir/Alevin.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/Alevin.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Alevin.cpp > CMakeFiles/salmon.dir/Alevin.cpp.i src/CMakeFiles/salmon.dir/Alevin.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/Alevin.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/Alevin.cpp -o CMakeFiles/salmon.dir/Alevin.cpp.s src/CMakeFiles/salmon.dir/AlevinHash.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/AlevinHash.cpp.o: ../src/AlevinHash.cpp src/CMakeFiles/salmon.dir/AlevinHash.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_10) "Building CXX object src/CMakeFiles/salmon.dir/AlevinHash.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/AlevinHash.cpp.o -MF CMakeFiles/salmon.dir/AlevinHash.cpp.o.d -o CMakeFiles/salmon.dir/AlevinHash.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlevinHash.cpp src/CMakeFiles/salmon.dir/AlevinHash.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/AlevinHash.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlevinHash.cpp > CMakeFiles/salmon.dir/AlevinHash.cpp.i src/CMakeFiles/salmon.dir/AlevinHash.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/AlevinHash.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlevinHash.cpp -o CMakeFiles/salmon.dir/AlevinHash.cpp.s src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.o: ../src/SalmonAlevin.cpp src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_11) "Building CXX object src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.o -MF CMakeFiles/salmon.dir/SalmonAlevin.cpp.o.d -o CMakeFiles/salmon.dir/SalmonAlevin.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonAlevin.cpp src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/SalmonAlevin.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonAlevin.cpp > CMakeFiles/salmon.dir/SalmonAlevin.cpp.i src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/SalmonAlevin.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonAlevin.cpp -o CMakeFiles/salmon.dir/SalmonAlevin.cpp.s src/CMakeFiles/salmon.dir/WhiteList.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/WhiteList.cpp.o: ../src/WhiteList.cpp src/CMakeFiles/salmon.dir/WhiteList.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_12) "Building CXX object src/CMakeFiles/salmon.dir/WhiteList.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/WhiteList.cpp.o -MF CMakeFiles/salmon.dir/WhiteList.cpp.o.d -o CMakeFiles/salmon.dir/WhiteList.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/WhiteList.cpp src/CMakeFiles/salmon.dir/WhiteList.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/WhiteList.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/WhiteList.cpp > CMakeFiles/salmon.dir/WhiteList.cpp.i src/CMakeFiles/salmon.dir/WhiteList.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/WhiteList.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/WhiteList.cpp -o CMakeFiles/salmon.dir/WhiteList.cpp.s src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.o: ../src/SalmonQuantify.cpp src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_13) "Building CXX object src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.o -MF CMakeFiles/salmon.dir/SalmonQuantify.cpp.o.d -o CMakeFiles/salmon.dir/SalmonQuantify.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantify.cpp src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/SalmonQuantify.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantify.cpp > CMakeFiles/salmon.dir/SalmonQuantify.cpp.i src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/SalmonQuantify.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantify.cpp -o CMakeFiles/salmon.dir/SalmonQuantify.cpp.s src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o: ../src/FragmentLengthDistribution.cpp src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_14) "Building CXX object src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o -MF CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o.d -o CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FragmentLengthDistribution.cpp src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FragmentLengthDistribution.cpp > CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.i src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FragmentLengthDistribution.cpp -o CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.s src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o: ../src/FragmentStartPositionDistribution.cpp src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_15) "Building CXX object src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o -MF CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o.d -o CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FragmentStartPositionDistribution.cpp src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FragmentStartPositionDistribution.cpp > CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.i src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FragmentStartPositionDistribution.cpp -o CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.s src/CMakeFiles/salmon.dir/GZipWriter.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/GZipWriter.cpp.o: ../src/GZipWriter.cpp src/CMakeFiles/salmon.dir/GZipWriter.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_16) "Building CXX object src/CMakeFiles/salmon.dir/GZipWriter.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/GZipWriter.cpp.o -MF CMakeFiles/salmon.dir/GZipWriter.cpp.o.d -o CMakeFiles/salmon.dir/GZipWriter.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/GZipWriter.cpp src/CMakeFiles/salmon.dir/GZipWriter.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/GZipWriter.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/GZipWriter.cpp > CMakeFiles/salmon.dir/GZipWriter.cpp.i src/CMakeFiles/salmon.dir/GZipWriter.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/GZipWriter.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/GZipWriter.cpp -o CMakeFiles/salmon.dir/GZipWriter.cpp.s src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o: ../src/SalmonQuantMerge.cpp src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_17) "Building CXX object src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o -MF CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o.d -o CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantMerge.cpp src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantMerge.cpp > CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.i src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantMerge.cpp -o CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.s src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o: ../src/ProgramOptionsGenerator.cpp src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_18) "Building CXX object src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o -MF CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o.d -o CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/ProgramOptionsGenerator.cpp src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/ProgramOptionsGenerator.cpp > CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.i src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/ProgramOptionsGenerator.cpp -o CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.s src/CMakeFiles/salmon.dir/FASTAParser.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/FASTAParser.cpp.o: ../src/FASTAParser.cpp src/CMakeFiles/salmon.dir/FASTAParser.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_19) "Building CXX object src/CMakeFiles/salmon.dir/FASTAParser.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/FASTAParser.cpp.o -MF CMakeFiles/salmon.dir/FASTAParser.cpp.o.d -o CMakeFiles/salmon.dir/FASTAParser.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FASTAParser.cpp src/CMakeFiles/salmon.dir/FASTAParser.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/FASTAParser.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FASTAParser.cpp > CMakeFiles/salmon.dir/FASTAParser.cpp.i src/CMakeFiles/salmon.dir/FASTAParser.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/FASTAParser.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/FASTAParser.cpp -o CMakeFiles/salmon.dir/FASTAParser.cpp.s src/CMakeFiles/salmon.dir/AlignmentModel.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/AlignmentModel.cpp.o: ../src/AlignmentModel.cpp src/CMakeFiles/salmon.dir/AlignmentModel.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_20) "Building CXX object src/CMakeFiles/salmon.dir/AlignmentModel.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/AlignmentModel.cpp.o -MF CMakeFiles/salmon.dir/AlignmentModel.cpp.o.d -o CMakeFiles/salmon.dir/AlignmentModel.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlignmentModel.cpp src/CMakeFiles/salmon.dir/AlignmentModel.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/AlignmentModel.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlignmentModel.cpp > CMakeFiles/salmon.dir/AlignmentModel.cpp.i src/CMakeFiles/salmon.dir/AlignmentModel.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/AlignmentModel.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlignmentModel.cpp -o CMakeFiles/salmon.dir/AlignmentModel.cpp.s src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o: ../src/ONTAlignmentModel.cpp src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_21) "Building CXX object src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o -MF CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o.d -o CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/ONTAlignmentModel.cpp src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/ONTAlignmentModel.cpp > CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.i src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/ONTAlignmentModel.cpp -o CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.s src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.o: ../src/AlignmentCommon.cpp src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_22) "Building CXX object src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.o -MF CMakeFiles/salmon.dir/AlignmentCommon.cpp.o.d -o CMakeFiles/salmon.dir/AlignmentCommon.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlignmentCommon.cpp src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/AlignmentCommon.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlignmentCommon.cpp > CMakeFiles/salmon.dir/AlignmentCommon.cpp.i src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/AlignmentCommon.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/AlignmentCommon.cpp -o CMakeFiles/salmon.dir/AlignmentCommon.cpp.s src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o: ../src/SalmonQuantifyAlignments.cpp src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_23) "Building CXX object src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o -MF CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o.d -o CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantifyAlignments.cpp src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantifyAlignments.cpp > CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.i src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/SalmonQuantifyAlignments.cpp -o CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.s src/CMakeFiles/salmon.dir/BAMUtils.cpp.o: src/CMakeFiles/salmon.dir/flags.make src/CMakeFiles/salmon.dir/BAMUtils.cpp.o: ../src/BAMUtils.cpp src/CMakeFiles/salmon.dir/BAMUtils.cpp.o: src/CMakeFiles/salmon.dir/compiler_depend.ts @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_24) "Building CXX object src/CMakeFiles/salmon.dir/BAMUtils.cpp.o" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -MD -MT src/CMakeFiles/salmon.dir/BAMUtils.cpp.o -MF CMakeFiles/salmon.dir/BAMUtils.cpp.o.d -o CMakeFiles/salmon.dir/BAMUtils.cpp.o -c /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/BAMUtils.cpp src/CMakeFiles/salmon.dir/BAMUtils.cpp.i: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Preprocessing CXX source to CMakeFiles/salmon.dir/BAMUtils.cpp.i" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -E /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/BAMUtils.cpp > CMakeFiles/salmon.dir/BAMUtils.cpp.i src/CMakeFiles/salmon.dir/BAMUtils.cpp.s: cmake_force @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green "Compiling CXX source to assembly CMakeFiles/salmon.dir/BAMUtils.cpp.s" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && /usr/bin/c++ $(CXX_DEFINES) $(CXX_INCLUDES) $(CXX_FLAGS) -S /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src/BAMUtils.cpp -o CMakeFiles/salmon.dir/BAMUtils.cpp.s # Object files for target salmon salmon_OBJECTS = \ "CMakeFiles/salmon.dir/EMUtils.cpp.o" \ "CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o" \ "CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o" \ "CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o" \ "CMakeFiles/salmon.dir/Salmon.cpp.o" \ "CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o" \ "CMakeFiles/salmon.dir/Graph.cpp.o" \ "CMakeFiles/salmon.dir/DedupUMI.cpp.o" \ "CMakeFiles/salmon.dir/Alevin.cpp.o" \ "CMakeFiles/salmon.dir/AlevinHash.cpp.o" \ "CMakeFiles/salmon.dir/SalmonAlevin.cpp.o" \ "CMakeFiles/salmon.dir/WhiteList.cpp.o" \ "CMakeFiles/salmon.dir/SalmonQuantify.cpp.o" \ "CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o" \ "CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o" \ "CMakeFiles/salmon.dir/GZipWriter.cpp.o" \ "CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o" \ "CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o" \ "CMakeFiles/salmon.dir/FASTAParser.cpp.o" \ "CMakeFiles/salmon.dir/AlignmentModel.cpp.o" \ "CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o" \ "CMakeFiles/salmon.dir/AlignmentCommon.cpp.o" \ "CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o" \ "CMakeFiles/salmon.dir/BAMUtils.cpp.o" # External object files for target salmon salmon_EXTERNAL_OBJECTS = src/salmon: src/CMakeFiles/salmon.dir/EMUtils.cpp.o src/salmon: src/CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o src/salmon: src/CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o src/salmon: src/CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o src/salmon: src/CMakeFiles/salmon.dir/Salmon.cpp.o src/salmon: src/CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o src/salmon: src/CMakeFiles/salmon.dir/Graph.cpp.o src/salmon: src/CMakeFiles/salmon.dir/DedupUMI.cpp.o src/salmon: src/CMakeFiles/salmon.dir/Alevin.cpp.o src/salmon: src/CMakeFiles/salmon.dir/AlevinHash.cpp.o src/salmon: src/CMakeFiles/salmon.dir/SalmonAlevin.cpp.o src/salmon: src/CMakeFiles/salmon.dir/WhiteList.cpp.o src/salmon: src/CMakeFiles/salmon.dir/SalmonQuantify.cpp.o src/salmon: src/CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o src/salmon: src/CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o src/salmon: src/CMakeFiles/salmon.dir/GZipWriter.cpp.o src/salmon: src/CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o src/salmon: src/CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o src/salmon: src/CMakeFiles/salmon.dir/FASTAParser.cpp.o src/salmon: src/CMakeFiles/salmon.dir/AlignmentModel.cpp.o src/salmon: src/CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o src/salmon: src/CMakeFiles/salmon.dir/AlignmentCommon.cpp.o src/salmon: src/CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o src/salmon: src/CMakeFiles/salmon.dir/BAMUtils.cpp.o src/salmon: src/CMakeFiles/salmon.dir/build.make src/salmon: external/pufferfish/src/libpuffer.a src/salmon: src/libsalmon_core.a src/salmon: external/pufferfish/external/twopaco/graphconstructor/libtwopaco.a src/salmon: external/pufferfish/external/twopaco/graphdump/libgraphdump.a src/salmon: external/pufferfish/external/ntcard/libntcard.a src/salmon: /usr/lib64/libboost_iostreams.a src/salmon: /usr/lib64/libboost_system.a src/salmon: /usr/lib64/libboost_filesystem.a src/salmon: /usr/lib64/libboost_timer.a src/salmon: /usr/lib64/libboost_chrono.a src/salmon: /usr/lib64/libboost_program_options.a src/salmon: /usr/lib64/libboost_regex.a src/salmon: /usr/lib64/libcurl.so src/salmon: /usr/lib64/libz.so src/salmon: ../external/install/lib/libstaden-read.a src/salmon: ../external/install/lib/libhtscodecs.a src/salmon: /usr/lib64/liblzma.so src/salmon: /usr/lib64/libbz2.so src/salmon: external/pufferfish/src/libksw2pp.a src/salmon: src/libalevin_core.a src/salmon: ../external/install/lib/libjemalloc.a src/salmon: ../external/install/lib64/libtbb.so.12.5 src/salmon: ../external/install/lib64/libtbbmalloc.so.2.5 src/salmon: src/CMakeFiles/salmon.dir/link.txt @$(CMAKE_COMMAND) -E cmake_echo_color --switch=$(COLOR) --green --bold --progress-dir=/home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/CMakeFiles --progress-num=$(CMAKE_PROGRESS_25) "Linking CXX executable salmon" cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && $(CMAKE_COMMAND) -E cmake_link_script CMakeFiles/salmon.dir/link.txt --verbose=$(VERBOSE) # Rule to build all files generated by this target. src/CMakeFiles/salmon.dir/build: src/salmon .PHONY : src/CMakeFiles/salmon.dir/build src/CMakeFiles/salmon.dir/clean: cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src && $(CMAKE_COMMAND) -P CMakeFiles/salmon.dir/cmake_clean.cmake .PHONY : src/CMakeFiles/salmon.dir/clean src/CMakeFiles/salmon.dir/depend: cd /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build && $(CMAKE_COMMAND) -E cmake_depends "Unix Makefiles" /home/psgendb/BIRCHDEV/install/salmon-1.10.1 /home/psgendb/BIRCHDEV/install/salmon-1.10.1/src /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src /home/psgendb/BIRCHDEV/install/salmon-1.10.1/build/src/CMakeFiles/salmon.dir/DependInfo.cmake --color=$(COLOR) .PHONY : src/CMakeFiles/salmon.dir/depend