/usr/bin/c++ -O3 -DNDEBUG -flto -fno-fat-lto-objects CMakeFiles/salmon.dir/EMUtils.cpp.o CMakeFiles/salmon.dir/CollapsedEMOptimizer.cpp.o CMakeFiles/salmon.dir/CollapsedCellOptimizer.cpp.o CMakeFiles/salmon.dir/CollapsedGibbsSampler.cpp.o CMakeFiles/salmon.dir/Salmon.cpp.o CMakeFiles/salmon.dir/BuildSalmonIndex.cpp.o CMakeFiles/salmon.dir/Graph.cpp.o CMakeFiles/salmon.dir/DedupUMI.cpp.o CMakeFiles/salmon.dir/Alevin.cpp.o CMakeFiles/salmon.dir/AlevinHash.cpp.o CMakeFiles/salmon.dir/SalmonAlevin.cpp.o CMakeFiles/salmon.dir/WhiteList.cpp.o CMakeFiles/salmon.dir/SalmonQuantify.cpp.o CMakeFiles/salmon.dir/FragmentLengthDistribution.cpp.o CMakeFiles/salmon.dir/FragmentStartPositionDistribution.cpp.o CMakeFiles/salmon.dir/GZipWriter.cpp.o CMakeFiles/salmon.dir/SalmonQuantMerge.cpp.o CMakeFiles/salmon.dir/ProgramOptionsGenerator.cpp.o CMakeFiles/salmon.dir/FASTAParser.cpp.o CMakeFiles/salmon.dir/AlignmentModel.cpp.o CMakeFiles/salmon.dir/ONTAlignmentModel.cpp.o CMakeFiles/salmon.dir/AlignmentCommon.cpp.o CMakeFiles/salmon.dir/SalmonQuantifyAlignments.cpp.o CMakeFiles/salmon.dir/BAMUtils.cpp.o -o salmon -L/home/psgendb/BIRCHDEV/install/salmon-1.10.1/lib -L/home/psgendb/BIRCHDEV/install/salmon-1.10.1/external/install/lib -Wl,-rpath,"\$ORIGIN/../lib:\$ORIGIN/../../lib:\$ORIGIN/:\$ORIGIN/../../external/install/lib" ../external/pufferfish/src/libpuffer.a libsalmon_core.a ../external/pufferfish/external/twopaco/graphconstructor/libtwopaco.a ../external/pufferfish/external/twopaco/graphdump/libgraphdump.a ../external/pufferfish/external/ntcard/libntcard.a -lgff /usr/lib64/libboost_iostreams.a /usr/lib64/libboost_system.a /usr/lib64/libboost_filesystem.a /usr/lib64/libboost_timer.a /usr/lib64/libboost_chrono.a /usr/lib64/libboost_program_options.a /usr/lib64/libboost_regex.a /usr/lib64/libcurl.so /usr/lib64/libz.so -lm ../../external/install/lib/libstaden-read.a ../../external/install/lib/libhtscodecs.a /usr/lib64/liblzma.so /usr/lib64/libbz2.so -lgomp ../external/pufferfish/src/libksw2pp.a libalevin_core.a ../../external/install/lib/libjemalloc.a ../../external/install/lib64/libtbb.so.12.5 ../../external/install/lib64/libtbbmalloc.so.2.5 -lrt -ldl -pthread