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# Copyright (C) 1994-2017 Free Software Foundation, Inc.

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# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.




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# Copyright (c) 2003, 2005-2007, 2009-2010, 2013 Genome Research Ltd.
# Author(s): James Bonfield
# 
# Redistribution and use in source and binary forms, with or without 
# modification, are permitted provided that the following conditions are met:
# 
#    1. Redistributions of source code must retain the above copyright notice,
#       this list of conditions and the following disclaimer.
# 
#    2. Redistributions in binary form must reproduce the above
#       copyright notice, this list of conditions and the following
#       disclaimer in the documentation and/or other materials provided
#       with the distribution.
# 
#    3. Neither the names Genome Research Ltd and Wellcome Trust Sanger
#    Institute nor the names of its contributors may be used to endorse
#    or promote products derived from this software without specific
#    prior written permission.
# 
# THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS
# IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
# TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
# PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH
# LTD OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
# 
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	  echo " $(MKDIR_P) '$(DESTDIR)$(libdir)'"; \
	  $(MKDIR_P) "$(DESTDIR)$(libdir)" || exit 1; \
	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 '$(DESTDIR)$(libdir)'"; \
	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=install $(INSTALL) $(INSTALL_STRIP_FLAG) $$list2 "$(DESTDIR)$(libdir)"; \
	}

uninstall-libLTLIBRARIES:
	@$(NORMAL_UNINSTALL)
	@list='$(lib_LTLIBRARIES)'; test -n "$(libdir)" || list=; \
	for p in $$list; do \
	  $(am__strip_dir) \
	  echo " $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f '$(DESTDIR)$(libdir)/$$f'"; \
	  $(LIBTOOL) $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=uninstall rm -f "$(DESTDIR)$(libdir)/$$f"; \
	done

clean-libLTLIBRARIES:
	-test -z "$(lib_LTLIBRARIES)" || rm -f $(lib_LTLIBRARIES)
	@list='$(lib_LTLIBRARIES)'; \
	locs=`for p in $$list; do echo $$p; done | \
	      sed 's|^[^/]*$$|.|; s|/[^/]*$$||; s|$$|/so_locations|' | \
	      sort -u`; \
	test -z "$$locs" || { \
	  echo rm -f $${locs}; \
	  rm -f $${locs}; \
	}

libstaden-read.la: $(libstaden_read_la_OBJECTS) $(libstaden_read_la_DEPENDENCIES) $(EXTRA_libstaden_read_la_DEPENDENCIES) 
	$(AM_V_CCLD)$(libstaden_read_la_LINK) -rpath $(libdir) $(libstaden_read_la_OBJECTS) $(libstaden_read_la_LIBADD) $(LIBS)

mostlyclean-compile:
	-rm -f *.$(OBJEXT)

distclean-compile:
	-rm -f *.tab.c

include ./$(DEPDIR)/libstaden_read_la-Read.Plo
include ./$(DEPDIR)/libstaden_read_la-array.Plo
include ./$(DEPDIR)/libstaden_read_la-bam.Plo
include ./$(DEPDIR)/libstaden_read_la-bgzip.Plo
include ./$(DEPDIR)/libstaden_read_la-binning.Plo
include ./$(DEPDIR)/libstaden_read_la-compress.Plo
include ./$(DEPDIR)/libstaden_read_la-compression.Plo
include ./$(DEPDIR)/libstaden_read_la-cram_bambam.Plo
include ./$(DEPDIR)/libstaden_read_la-cram_codecs.Plo
include ./$(DEPDIR)/libstaden_read_la-cram_decode.Plo
include ./$(DEPDIR)/libstaden_read_la-cram_encode.Plo
include ./$(DEPDIR)/libstaden_read_la-cram_index.Plo
include ./$(DEPDIR)/libstaden_read_la-cram_io.Plo
include ./$(DEPDIR)/libstaden_read_la-cram_stats.Plo
include ./$(DEPDIR)/libstaden_read_la-crc32.Plo
include ./$(DEPDIR)/libstaden_read_la-deflate_interlaced.Plo
include ./$(DEPDIR)/libstaden_read_la-dstring.Plo
include ./$(DEPDIR)/libstaden_read_la-error.Plo
include ./$(DEPDIR)/libstaden_read_la-expFileIO.Plo
include ./$(DEPDIR)/libstaden_read_la-files.Plo
include ./$(DEPDIR)/libstaden_read_la-find.Plo
include ./$(DEPDIR)/libstaden_read_la-fpoint.Plo
include ./$(DEPDIR)/libstaden_read_la-hash_table.Plo
include ./$(DEPDIR)/libstaden_read_la-jenkins_lookup3.Plo
include ./$(DEPDIR)/libstaden_read_la-mFILE.Plo
include ./$(DEPDIR)/libstaden_read_la-mach-io.Plo
include ./$(DEPDIR)/libstaden_read_la-md5.Plo
include ./$(DEPDIR)/libstaden_read_la-misc_scf.Plo
include ./$(DEPDIR)/libstaden_read_la-open_trace_file.Plo
include ./$(DEPDIR)/libstaden_read_la-pooled_alloc.Plo
include ./$(DEPDIR)/libstaden_read_la-read_alloc.Plo
include ./$(DEPDIR)/libstaden_read_la-read_scf.Plo
include ./$(DEPDIR)/libstaden_read_la-sam_header.Plo
include ./$(DEPDIR)/libstaden_read_la-scf_extras.Plo
include ./$(DEPDIR)/libstaden_read_la-scram.Plo
include ./$(DEPDIR)/libstaden_read_la-seqIOABI.Plo
include ./$(DEPDIR)/libstaden_read_la-seqIOALF.Plo
include ./$(DEPDIR)/libstaden_read_la-seqIOPlain.Plo
include ./$(DEPDIR)/libstaden_read_la-sff.Plo
include ./$(DEPDIR)/libstaden_read_la-srf.Plo
include ./$(DEPDIR)/libstaden_read_la-string_alloc.Plo
include ./$(DEPDIR)/libstaden_read_la-strings.Plo
include ./$(DEPDIR)/libstaden_read_la-thread_pool.Plo
include ./$(DEPDIR)/libstaden_read_la-traceType.Plo
include ./$(DEPDIR)/libstaden_read_la-translate.Plo
include ./$(DEPDIR)/libstaden_read_la-vlen.Plo
include ./$(DEPDIR)/libstaden_read_la-write_scf.Plo
include ./$(DEPDIR)/libstaden_read_la-xalloc.Plo
include ./$(DEPDIR)/libstaden_read_la-zfio.Plo
include ./$(DEPDIR)/libstaden_read_la-ztr.Plo
include ./$(DEPDIR)/libstaden_read_la-ztr_translate.Plo

.c.o:
	$(AM_V_CC)$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
	$(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
#	$(AM_V_CC)source='$<' object='$@' libtool=no \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(COMPILE) -c -o $@ $<

.c.obj:
	$(AM_V_CC)$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
	$(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
#	$(AM_V_CC)source='$<' object='$@' libtool=no \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(COMPILE) -c -o $@ `$(CYGPATH_W) '$<'`

.c.lo:
	$(AM_V_CC)$(LTCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
	$(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
#	$(AM_V_CC)source='$<' object='$@' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LTCOMPILE) -c -o $@ $<

libstaden_read_la-Read.lo: Read.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-Read.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-Read.Tpo -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo '$(srcdir)/'`Read.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-Read.Tpo $(DEPDIR)/libstaden_read_la-Read.Plo
#	$(AM_V_CC)source='Read.c' object='libstaden_read_la-Read.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo '$(srcdir)/'`Read.c

libstaden_read_la-scf_extras.lo: scf_extras.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-scf_extras.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-scf_extras.Tpo -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo '$(srcdir)/'`scf_extras.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-scf_extras.Tpo $(DEPDIR)/libstaden_read_la-scf_extras.Plo
#	$(AM_V_CC)source='scf_extras.c' object='libstaden_read_la-scf_extras.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo '$(srcdir)/'`scf_extras.c

libstaden_read_la-translate.lo: translate.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-translate.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-translate.Tpo -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo '$(srcdir)/'`translate.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-translate.Tpo $(DEPDIR)/libstaden_read_la-translate.Plo
#	$(AM_V_CC)source='translate.c' object='libstaden_read_la-translate.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo '$(srcdir)/'`translate.c

libstaden_read_la-compression.lo: compression.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-compression.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-compression.Tpo -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo '$(srcdir)/'`compression.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-compression.Tpo $(DEPDIR)/libstaden_read_la-compression.Plo
#	$(AM_V_CC)source='compression.c' object='libstaden_read_la-compression.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo '$(srcdir)/'`compression.c

libstaden_read_la-ztr.lo: ztr.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-ztr.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-ztr.Tpo -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo '$(srcdir)/'`ztr.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-ztr.Tpo $(DEPDIR)/libstaden_read_la-ztr.Plo
#	$(AM_V_CC)source='ztr.c' object='libstaden_read_la-ztr.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo '$(srcdir)/'`ztr.c

libstaden_read_la-ztr_translate.lo: ztr_translate.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-ztr_translate.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-ztr_translate.Tpo -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo '$(srcdir)/'`ztr_translate.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-ztr_translate.Tpo $(DEPDIR)/libstaden_read_la-ztr_translate.Plo
#	$(AM_V_CC)source='ztr_translate.c' object='libstaden_read_la-ztr_translate.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo '$(srcdir)/'`ztr_translate.c

libstaden_read_la-deflate_interlaced.lo: deflate_interlaced.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-deflate_interlaced.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-deflate_interlaced.Tpo -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo '$(srcdir)/'`deflate_interlaced.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-deflate_interlaced.Tpo $(DEPDIR)/libstaden_read_la-deflate_interlaced.Plo
#	$(AM_V_CC)source='deflate_interlaced.c' object='libstaden_read_la-deflate_interlaced.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo '$(srcdir)/'`deflate_interlaced.c

libstaden_read_la-fpoint.lo: fpoint.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-fpoint.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-fpoint.Tpo -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo '$(srcdir)/'`fpoint.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-fpoint.Tpo $(DEPDIR)/libstaden_read_la-fpoint.Plo
#	$(AM_V_CC)source='fpoint.c' object='libstaden_read_la-fpoint.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo '$(srcdir)/'`fpoint.c

libstaden_read_la-seqIOABI.lo: seqIOABI.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-seqIOABI.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-seqIOABI.Tpo -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo '$(srcdir)/'`seqIOABI.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-seqIOABI.Tpo $(DEPDIR)/libstaden_read_la-seqIOABI.Plo
#	$(AM_V_CC)source='seqIOABI.c' object='libstaden_read_la-seqIOABI.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo '$(srcdir)/'`seqIOABI.c

libstaden_read_la-seqIOALF.lo: seqIOALF.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-seqIOALF.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-seqIOALF.Tpo -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo '$(srcdir)/'`seqIOALF.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-seqIOALF.Tpo $(DEPDIR)/libstaden_read_la-seqIOALF.Plo
#	$(AM_V_CC)source='seqIOALF.c' object='libstaden_read_la-seqIOALF.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo '$(srcdir)/'`seqIOALF.c

libstaden_read_la-expFileIO.lo: expFileIO.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-expFileIO.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-expFileIO.Tpo -c -o libstaden_read_la-expFileIO.lo `test -f 'expFileIO.c' || echo '$(srcdir)/'`expFileIO.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-expFileIO.Tpo $(DEPDIR)/libstaden_read_la-expFileIO.Plo
#	$(AM_V_CC)source='expFileIO.c' object='libstaden_read_la-expFileIO.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-expFileIO.lo `test -f 'expFileIO.c' || echo '$(srcdir)/'`expFileIO.c

libstaden_read_la-seqIOPlain.lo: seqIOPlain.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-seqIOPlain.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-seqIOPlain.Tpo -c -o libstaden_read_la-seqIOPlain.lo `test -f 'seqIOPlain.c' || echo '$(srcdir)/'`seqIOPlain.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-seqIOPlain.Tpo $(DEPDIR)/libstaden_read_la-seqIOPlain.Plo
#	$(AM_V_CC)source='seqIOPlain.c' object='libstaden_read_la-seqIOPlain.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
#	$(AM_V_CC_no)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -c -o libstaden_read_la-seqIOPlain.lo `test -f 'seqIOPlain.c' || echo '$(srcdir)/'`seqIOPlain.c

libstaden_read_la-misc_scf.lo: misc_scf.c
	$(AM_V_CC)$(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(libstaden_read_la_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS) -MT libstaden_read_la-misc_scf.lo -MD -MP -MF $(DEPDIR)/libstaden_read_la-misc_scf.Tpo -c -o libstaden_read_la-misc_scf.lo `test -f 'misc_scf.c' || echo '$(srcdir)/'`misc_scf.c
	$(AM_V_at)$(am__mv) $(DEPDIR)/libstaden_read_la-misc_scf.Tpo $(DEPDIR)/libstaden_read_la-misc_scf.Plo
#	$(AM_V_CC)source='misc_scf.c' object='libstaden_read_la-misc_scf.lo' libtool=yes \
#	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) \
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libstaden_read_la-read_scf.lo: read_scf.c
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libstaden_read_la-cram_stats.lo: cram_stats.c
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libstaden_read_la-cram_io.lo: cram_io.c
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libstaden_read_la-cram_index.lo: cram_index.c
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libstaden_read_la-zfio.lo: zfio.c
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libstaden_read_la-dstring.lo: dstring.c
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libstaden_read_la-md5.lo: md5.c
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libstaden_read_la-crc32.lo: crc32.c
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libstaden_read_la-scram.lo: scram.c
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libstaden_read_la-thread_pool.lo: thread_pool.c
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libstaden_read_la-binning.lo: binning.c
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libstaden_read_la-cram_bambam.lo: cram_bambam.c
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libstaden_read_la-bgzip.lo: bgzip.c
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.PRECIOUS: Makefile


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