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![]() | Parent Directory | - | ||
![]() | Artemis/ | 2018-09-12 05:08 | - | |
![]() | BLAT_to_SAM.pl | 2018-09-12 05:08 | 21K | |
![]() | ButterflyFastaToGrap..> | 2018-09-12 05:08 | 1.7K | |
![]() | HiCpipe_nameSortedSa..> | 2018-09-12 05:08 | 2.3K | |
![]() | Monarch | 2018-09-12 05:08 | 8.7K | |
![]() | Monarch_util/ | 2018-09-12 05:08 | - | |
![]() | N50.pl | 2018-09-12 05:08 | 895 | |
![]() | PerlLib/ | 2018-09-12 05:08 | - | |
![]() | SAM_coordsorted_max_..> | 2018-09-12 05:08 | 1.0K | |
![]() | SAM_intron_extractor.pl | 2018-09-12 05:08 | 3.5K | |
![]() | SAM_nameSorted_to_un..> | 2018-09-12 05:08 | 7.5K | |
![]() | SAM_pair_to_bed.pl | 2018-09-12 05:08 | 1.9K | |
![]() | SAM_show_alignment.pl | 2018-09-12 05:08 | 7.4K | |
![]() | SAM_show_alignment.s..> | 2018-09-12 05:08 | 4.0K | |
![]() | SAM_sortAny_to_count..> | 2018-09-12 05:08 | 4.3K | |
![]() | SAM_toString.pl | 2018-09-12 05:08 | 1.0K | |
![]() | SAM_to_bed.pl | 2018-09-12 05:08 | 1.5K | |
![]() | SAM_to_fasta.pl | 2018-09-12 05:08 | 700 | |
![]() | SRA_to_fastq.notes | 2018-09-12 05:08 | 77 | |
![]() | SRA_to_fastq.pl | 2018-09-12 05:08 | 1.6K | |
![]() | TEST_SUPPORT/ | 2018-09-12 05:08 | - | |
![]() | TPM_weighted_gene_le..> | 2018-09-12 05:08 | 4.6K | |
![]() | TophatCufflinksWrapp..> | 2018-09-12 05:08 | 4.8K | |
![]() | Trinity_genome_align..> | 2018-09-12 05:08 | 9.4K | |
![]() | acc_list_to_fasta_en..> | 2018-09-12 05:08 | 4.5K | |
![]() | alexie_analyze_blast.pl | 2018-09-12 05:08 | 35K | |
![]() | align_reads_launch_i..> | 2018-09-12 05:08 | 1.2K | |
![]() | allele_simulator.pl | 2018-09-12 05:08 | 2.1K | |
![]() | alt_GG_read_partitio..> | 2018-09-12 05:08 | - | |
![]() | altsplice_simulation..> | 2018-09-12 05:08 | - | |
![]() | analyze_blastPlus_to..> | 2018-09-12 05:08 | 2.6K | |
![]() | analyze_blastPlus_to..> | 2018-09-12 05:08 | 5.9K | |
![]() | analyze_blastPlus_to..> | 2018-09-12 05:08 | 2.1K | |
![]() | analyze_blastPlus_to..> | 2018-09-12 05:08 | 1.2K | |
![]() | average.pl | 2018-09-12 05:08 | 804 | |
![]() | bam_gene_tests/ | 2018-09-12 05:08 | - | |
![]() | blast_outfmt6_group_..> | 2018-09-12 05:08 | 4.8K | |
![]() | blast_outfmt6_group_..> | 2018-09-12 05:08 | 4.3K | |
![]() | blast_outfmt6_group_..> | 2018-09-12 05:08 | 3.0K | |
![]() | blastn_wrapper.pl | 2018-09-12 05:08 | 627 | |
![]() | blat_util/ | 2018-09-12 05:08 | - | |
![]() | capture_orig_n_unmap..> | 2018-09-12 05:08 | 5.5K | |
![]() | cat_require_newlines.pl | 2018-09-12 05:08 | 223 | |
![]() | cdhit_examine_isofor..> | 2018-09-12 05:08 | 1.3K | |
![]() | cdna_fasta_file_to_t..> | 2018-09-12 05:08 | 768 | |
![]() | check_chrysalis_grap..> | 2018-09-12 05:08 | 1.0K | |
![]() | check_fastQ_pair_ord..> | 2018-09-12 05:08 | 1.4K | |
![]() | chrys_graph_to_dot.pl | 2018-09-12 05:08 | 492 | |
![]() | combined_nameSorted_..> | 2018-09-12 05:08 | 2.7K | |
![]() | compare_FL_stats.pl | 2018-09-12 05:08 | 1.5K | |
![]() | compare_bflies.pl | 2018-09-12 05:08 | 1.9K | |
![]() | component_to_graph_d..> | 2018-09-12 05:08 | 4.0K | |
![]() | contig_ExN50_statist..> | 2018-09-12 05:08 | 3.0K | |
![]() | convert_fasta_identi..> | 2018-09-12 05:08 | 685 | |
![]() | count_N50_given_MIN_..> | 2018-09-12 05:08 | 1.7K | |
![]() | count_features_given..> | 2018-09-12 05:08 | 769 | |
![]() | count_iso_per_gene_d..> | 2018-09-12 05:08 | 668 | |
![]() | count_matrix_feature..> | 2018-09-12 05:08 | 877 | |
![]() | count_number_fasta_s..> | 2018-09-12 05:08 | 348 | |
![]() | count_trans_per_comp..> | 2018-09-12 05:08 | 1.1K | |
![]() | decode_SAM_flag_valu..> | 2018-09-12 05:08 | 1.6K | |
![]() | describe_SAM_read_fl..> | 2018-09-12 05:08 | 2.0K | |
![]() | determine_RF_strand_..> | 2018-09-12 05:08 | 2.4K | |
![]() | ensure_paired_end_ba..> | 2018-09-12 05:08 | 936 | |
![]() | examine_iworm_FL_acr..> | 2018-09-12 05:08 | 2.4K | |
![]() | examine_strand_speci..> | 2018-09-12 05:08 | 2.7K | |
![]() | examine_weldmer_halv..> | 2018-09-12 05:08 | 2.3K | |
![]() | extract_fastQ_pairin..> | 2018-09-12 05:08 | 6.5K | |
![]() | fan_out_fasta_seqs_t..> | 2018-09-12 05:08 | 2.6K | |
![]() | fastQ_append_acc.pl | 2018-09-12 05:08 | 739 | |
![]() | fastQ_rand_subset.SE..> | 2018-09-12 05:08 | 2.4K | |
![]() | fastQ_rand_subset.pl | 2018-09-12 05:08 | 2.7K | |
![]() | fastQ_rand_subset.re..> | 2018-09-12 05:08 | 3.3K | |
![]() | fastQ_top_N_records.pl | 2018-09-12 05:08 | 644 | |
![]() | fasta_file_reformatt..> | 2018-09-12 05:08 | 464 | |
![]() | fasta_filter_by_min_..> | 2018-09-12 05:08 | 558 | |
![]() | fasta_remove_duplica..> | 2018-09-12 05:08 | 679 | |
![]() | fasta_seq_length.pl | 2018-09-12 05:08 | 509 | |
![]() | fasta_to_cmd_generat..> | 2018-09-12 05:08 | 3.2K | |
![]() | fasta_write_sense_n_..> | 2018-09-12 05:08 | 632 | |
![]() | fastq_cleaner.pl | 2018-09-12 05:08 | 1.5K | |
![]() | fastq_interleave_pai..> | 2018-09-12 05:08 | 1.3K | |
![]() | fastq_merge_sorted_t..> | 2018-09-12 05:08 | 2.1K | |
![]() | fastq_stats.pl | 2018-09-12 05:08 | 6.6K | |
![]() | fastq_unweave_pairs.pl | 2018-09-12 05:08 | 1.2K | |
![]() | filter_out_accs_from..> | 2018-09-12 05:08 | 1.1K | |
![]() | filter_similar_seqs_..> | 2018-09-12 05:08 | 7.8K | |
![]() | flattened_gff_n_geno..> | 2018-09-12 05:08 | 4.5K | |
![]() | frag_boundary_to_wig.pl | 2018-09-12 05:08 | 1.2K | |
![]() | frag_to_bed.pl | 2018-09-12 05:08 | 483 | |
![]() | gene_gff3_to_introns.pl | 2018-09-12 05:08 | 1.9K | |
![]() | gene_to_shared_trans..> | 2018-09-12 05:08 | 2.0K | |
![]() | genome_gff3_to_gene_..> | 2018-09-12 05:08 | 3.1K | |
![]() | get_GC_content_dist.pl | 2018-09-12 05:08 | 1.5K | |
![]() | get_longest_isoform_..> | 2018-09-12 05:08 | 1.7K | |
![]() | get_path_nodes_from_..> | 2018-09-12 05:08 | 647 | |
![]() | get_welds_from_chrys..> | 2018-09-12 05:08 | 391 | |
![]() | gff3_file_to_cdna.pl | 2018-09-12 05:08 | 3.0K | |
![]() | gff3_file_utr_covera..> | 2018-09-12 05:08 | 6.7K | |
![]() | gff3_to_genome_featu..> | 2018-09-12 05:08 | 4.5K | |
![]() | gff3_to_genome_featu..> | 2018-09-12 05:08 | 2.5K | |
![]() | gmap_gff3_chimera_ja..> | 2018-09-12 05:08 | 4.7K | |
![]() | gmap_gff3_to_percent..> | 2018-09-12 05:08 | 1.0K | |
![]() | gmap_gff3_to_percent..> | 2018-09-12 05:08 | 1.8K | |
![]() | gmap_native_to_forma..> | 2018-09-12 05:08 | 1.9K | |
![]() | gtf_to_bed_format.pl | 2018-09-12 05:08 | 1.8K | |
![]() | gtf_to_introns.pl | 2018-09-12 05:08 | 3.0K | |
![]() | hicpipe_raw_converte..> | 2018-09-12 05:08 | 353 | |
![]() | identify_distal_isof..> | 2018-09-12 05:08 | 4.6K | |
![]() | illustrate_ref_compa..> | 2018-09-12 05:08 | 4.7K | |
![]() | insilico_norm_kmer_h..> | 2018-09-12 05:08 | - | |
![]() | iso_reco_analysis/ | 2018-09-12 05:08 | - | |
![]() | iworm_welds_to_dot.pl | 2018-09-12 05:08 | 575 | |
![]() | jaccard_sam_pair_ref..> | 2018-09-12 05:08 | 2.7K | |
![]() | join_any.pl | 2018-09-12 05:08 | 828 | |
![]() | join_by_left_col.pl | 2018-09-12 05:08 | 827 | |
![]() | join_expr_vals_singl..> | 2018-09-12 05:08 | 929 | |
![]() | kmer_counter.pl | 2018-09-12 05:08 | 1.0K | |
![]() | m8_blastclust.pl | 2018-09-12 05:08 | 6.4K | |
![]() | map_gtf_transcripts_..> | 2018-09-12 05:08 | 16K | |
![]() | merge_RSEM_output_to..> | 2018-09-12 05:08 | 3.0K | |
![]() | merge_blast_n_rsem_r..> | 2018-09-12 05:08 | 1.4K | |
![]() | merge_rsem_n_express..> | 2018-09-12 05:08 | 1.9K | |
![]() | mpi_iworm_proc_conti..> | 2018-09-12 05:08 | 358 | |
![]() | nameSorted_SAM_to_Fa..> | 2018-09-12 05:08 | 1.7K | |
![]() | nameSorted_SAM_to_pa..> | 2018-09-12 05:08 | 4.0K | |
![]() | omp_iworm_thread_con..> | 2018-09-12 05:08 | 556 | |
![]() | organize_data_table_..> | 2018-09-12 05:08 | 439 | |
![]() | pair_up_fastq_files_..> | 2018-09-12 05:08 | 491 | |
![]() | pair_up_fastq_files_..> | 2018-09-12 05:08 | 584 | |
![]() | pair_up_fastq_files_..> | 2018-09-12 05:08 | 606 | |
![]() | pairwise_kmer_conten..> | 2018-09-12 05:08 | 1.8K | |
![]() | plot_ExN50_statistic..> | 2018-09-12 05:08 | 387 | |
![]() | plot_expressed_gene_..> | 2018-09-12 05:08 | 857 | |
![]() | plot_strand_specific..> | 2018-09-12 05:08 | 5.2K | |
![]() | print.pl | 2018-09-12 05:08 | 867 | |
![]() | print_kmers.pl | 2018-09-12 05:08 | 640 | |
![]() | process_GMAP_alignme..> | 2018-09-12 05:08 | 2.4K | |
![]() | prop_pair_sam_refine..> | 2018-09-12 05:08 | 1.9K | |
![]() | randomly_mutate_seqs.pl | 2018-09-12 05:08 | 4.1K | |
![]() | remove_cntrl_chars.pl | 2018-09-12 05:08 | 105 | |
![]() | row_to_column.pl | 2018-09-12 05:08 | 306 | |
![]() | run_DETONATE.pl | 2018-09-12 05:08 | 2.3K | |
![]() | run_GSNAP.pl | 2018-09-12 05:08 | 4.2K | |
![]() | run_HISAT.pl | 2018-09-12 05:08 | 4.8K | |
![]() | run_HISAT2_via_sampl..> | 2018-09-12 05:08 | 3.9K | |
![]() | run_HiCpipe_bowtie.pl | 2018-09-12 05:08 | 1.2K | |
![]() | run_STAR.pl | 2018-09-12 05:08 | 5.0K | |
![]() | run_STAR_via_samples..> | 2018-09-12 05:08 | 5.4K | |
![]() | run_TOPHAT.pl | 2018-09-12 05:08 | 1.8K | |
![]() | run_bowtie2.pl | 2018-09-12 05:08 | 1.8K | |
![]() | run_bwa.pl | 2018-09-12 05:08 | 3.2K | |
![]() | run_bwasw_trinity.pl | 2018-09-12 05:08 | 1.1K | |
![]() | run_jellyfish.pl | 2018-09-12 05:08 | 1.4K | |
![]() | run_read_simulator_p..> | 2018-09-12 05:08 | 1.7K | |
![]() | run_read_simulator_p..> | 2018-09-12 05:08 | 2.1K | |
![]() | run_trimmomatic_qual..> | 2018-09-12 05:08 | 2.1K | |
![]() | shuffle.pl | 2018-09-12 05:08 | 212 | |
![]() | sim_test_framework/ | 2018-09-12 05:08 | - | |
![]() | simulate_illuminaPE_..> | 2018-09-12 05:08 | 9.1K | |
![]() | simulate_illuminaPE_..> | 2018-09-12 05:08 | 4.0K | |
![]() | simulate_reads_sam_a..> | 2018-09-12 05:08 | 23K | |
![]() | sixFrameTranslation.pl | 2018-09-12 05:08 | 780 | |
![]() | sort_fastq.pl | 2018-09-12 05:08 | 1.2K | |
![]() | splice_path_analysis/ | 2018-09-12 05:08 | - | |
![]() | strip_fasta_header.pl | 2018-09-12 05:08 | 442 | |
![]() | tab_to_fastQ.pl | 2018-09-12 05:08 | 282 | |
![]() | tab_to_fasta.pl | 2018-09-12 05:08 | 278 | |
![]() | tblastn_wrapper.pl | 2018-09-12 05:08 | 628 | |
![]() | testUnlimitStacksize.pl | 2018-09-12 05:08 | 1.8K | |
![]() | transcript_coverage_..> | 2018-09-12 05:08 | 4.5K | |
![]() | transcript_fasta_to_..> | 2018-09-12 05:08 | 5.7K | |
![]() | transcript_gff3_to_b..> | 2018-09-12 05:08 | 2.0K | |
![]() | transdecoder_pep_to_..> | 2018-09-12 05:08 | 1.5K | |
![]() | trinity_component_di..> | 2018-09-12 05:08 | 2.2K | |
![]() | trinity_trans_matrix..> | 2018-09-12 05:08 | 1.7K | |