/* DbSqlConfig.java * * created: 2005 * * This file is part of Artemis * * Copyright (C) 2005 Genome Research Limited * * This program is free software; you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. * */ package uk.ac.sanger.artemis.chado; import com.ibatis.sqlmap.client.SqlMapClient; import com.ibatis.sqlmap.client.SqlMapClientBuilder; import com.ibatis.common.resources.Resources; import uk.ac.sanger.artemis.util.DatabaseLocationParser; import javax.swing.JPasswordField; import java.util.Properties; import java.io.Reader; /** * * Initialises iBatis configuration. * */ public class DbSqlConfig { private SqlMapClient sqlMap; /** * * Initialises iBatis configuration by reading the * artemis_sqlmap/chado_iBatis_config.xml file and the * database location properties defined by the system property, * e.g. -Dchado=localhost:2997/chado?tjc * * It is especially important that the -Dchado argument is not prefixed with * jdbc:postgresql:// as that is handled in iBatis * */ public void init(JPasswordField fpasswd) { try { String resource = "artemis_sqlmap/chado_iBatis_config.xml"; Reader reader = Resources.getResourceAsReader(resource); Properties properties = null; if(System.getProperty("chado") != null) { String url = System.getProperty("chado"); DatabaseLocationParser dlp = new DatabaseLocationParser(url); properties = new Properties(); properties.put("chado",dlp.getUnprefixedURL()); properties.put("username",dlp.getUsername()); if(fpasswd != null && fpasswd.getPassword().length > 0) properties.put("password", new String(fpasswd.getPassword())); } sqlMap = SqlMapClientBuilder.buildSqlMapClient(reader, properties); } catch(Exception e) { // If you get an error at this point, it doesnt matter what it was. It is going to be // unrecoverable and we will want the app to blow up hard so we are aware of the // problem. You should always log such errors and re-throw them in such a way that // you can be made immediately aware of the problem. e.printStackTrace(); throw new RuntimeException("Error initializing DbSqlConfig class. Cause: " + e); } } public void init2(JPasswordField fpasswd) { try { String resource = "artemis_sqlmap/chado_iBatis_config.xml"; Reader reader = Resources.getResourceAsReader(resource); sqlMap = SqlMapClientBuilder.buildSqlMapClient(reader); } catch(Exception e) { e.printStackTrace(); throw new RuntimeException("Error initializing DbSqlConfig class. Cause: " + e); } } public SqlMapClient getSqlMapInstance() { return sqlMap; } }