/* * BioJava development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public Licence. This should * be distributed with the code. If you do not have a copy, * see: * * http://www.gnu.org/copyleft/lesser.html * * Copyright for this code is held jointly by the individual * authors. These should be listed in @author doc comments. * * For more information on the BioJava project and its aims, * or to join the biojava-l mailing list, visit the home page * at: * * http://www.biojava.org/ * */ package org.biojava.bio.dist; import org.biojava.bio.symbol.FiniteAlphabet; /** * A distribution which does not interact with the training framework. * This class behaves in exactly the same manner as SimpleDistribution, * except that it has a no-op registerWithTrainer method. * It is useful for building Markov models where you wish to train only * a subset of the Distributions. * * @author Thomas Down * @since 1.3 */ public class UntrainableDistribution extends SimpleDistribution { /** * Construct a new untrainable distribution over the specified alphabet. * * @param alpha the finite alphabet to be over */ public UntrainableDistribution(FiniteAlphabet alpha) { super(alpha); } public void registerWithTrainer(DistributionTrainerContext dtc) { dtc.registerTrainer(this, IgnoreCountsTrainer.getInstance()); } }