/* * BioJava development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public Licence. This should * be distributed with the code. If you do not have a copy, * see: * * http://www.gnu.org/copyleft/lesser.html * * Copyright for this code is held jointly by the individual * authors. These should be listed in @author doc comments. * * For more information on the BioJava project and its aims, * or to join the biojava-l mailing list, visit the home page * at: * * http://www.biojava.org/ * */ package org.biojava.bio.gui.sequence; import org.biojava.bio.gui.glyph.ArrowGlyph; import org.biojava.bio.gui.glyph.HelixGlyph; import org.biojava.bio.gui.glyph.TurnGlyph; import org.biojava.bio.seq.FeatureFilter; import org.biojava.utils.ChangeVetoException; /** * A GlyphRenderer subclass that specificatlly handles Features pertaining to Secondary Structure * (Helices, Turns and Strands). * * @author Mark Southern * @see GlyphFeatureRenderer * @since 1.5 */ public class SecondaryStructureFeatureRenderer extends GlyphFeatureRenderer { public SecondaryStructureFeatureRenderer() throws ChangeVetoException { FeatureFilter ff = new FeatureFilter.ByType("HELIX"); addFilterAndGlyph(ff, new HelixGlyph()); ff = new FeatureFilter.ByType("STRAND"); addFilterAndGlyph(ff, new ArrowGlyph()); ff = new FeatureFilter.ByType("TURN"); addFilterAndGlyph(ff, new TurnGlyph()); } }