/* * BioJava development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public Licence. This should * be distributed with the code. If you do not have a copy, * see: * * http://www.gnu.org/copyleft/lesser.html * * Copyright for this code is held jointly by the individual * authors. These should be listed in @author doc comments. * * For more information on the BioJava project and its aims, * or to join the biojava-l mailing list, visit the home page * at: * * http://www.biojava.org/ * */ package org.biojava.bio.program.das; import org.biojava.bio.seq.RealizingFeatureHolder; import org.biojava.bio.seq.Sequence; /** * Sequence reflecting a DAS reference sequence, possibly * decorated with one of more annotation sets. * *

* This is an first-pass implementation. In future, I hope * to add query optimization for better performance on large * sequences, and pluggable transducers to parameterize the * creation of BioJava features. *

* * @since 1.2 * @author Thomas Down */ interface DASSequenceI extends Sequence, RealizingFeatureHolder { DASSequenceDB getParentDB(); }