/* * BioJava development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public Licence. This should * be distributed with the code. If you do not have a copy, * see: * * http://www.gnu.org/copyleft/lesser.html * * Copyright for this code is held jointly by the individual * authors. These should be listed in @author doc comments. * * For more information on the BioJava project and its aims, * or to join the biojava-l mailing list, visit the home page * at: * * http://www.biojava.org/ * */ package org.biojava.bio.seq.io; import java.io.Serializable; /** * Class description * * @author Greg Cox * @deprecated Use org.biojavax.bio.seq.io framework instead */ public class ProteinRefSeqProcessor extends GenbankProcessor { // Static variables // Member variables // Constructors and initialization public ProteinRefSeqProcessor(SequenceBuilder theDelegate) { super(theDelegate); features = new FeatureTableParser(this, "RefSeq:Protein"); } // Interface implementations // Public methods /** * Factory which wraps sequence builders in a ProteinRefSeqProcessor * * @author Greg Cox */ public static class Factory implements SequenceBuilderFactory, Serializable { private SequenceBuilderFactory delegateFactory; public Factory(SequenceBuilderFactory theDelegate) { delegateFactory = theDelegate; } public SequenceBuilder makeSequenceBuilder() { return new ProteinRefSeqProcessor(delegateFactory.makeSequenceBuilder()); } } // Protected methods // Private methods }