TBLASTN 2.0a19MP-WashU [05-Feb-1998] [Build sol2.5-ultra 01:47:30 05-Feb-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= sp|P09429|HMG1_HUMAN HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1) - Homo sapiens (Human). (214 letters) Database: embl 442,729 sequences; 675,252,082 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N X12597 Human mRNA for high mobility grou... +2 1144 4.8e-115 1 X12796 Bovine mRNA for high mobility gro... +2 1140 1.0e-114 1 Z11997 M.musculus mRNA for non-histone c... +1 1137 1.2e-114 1 M21683;M21684 Pig nonhistone protein HMG1 mRNA,... +3 1135 2.0e-114 1 U00431 Mus musculus HMG-1 mRNA, complete... +2 1137 2.0e-114 1 M64986 Rat amphoterin mRNA, complete cds. +3 1137 2.2e-114 1 M63852 Rat high mobility group 1 protein... +2 1137 2.9e-114 1 Y00463 Rat mRNA for high mobility group ... +1 1137 3.2e-114 1 L38477 Mus musculus (clone Clebp-1) high... +2 1130 1.2e-113 1 D63874 Human mRNA for HMG-1, complete cds. +2 1124 5.3e-113 1 L08048 Human non-histone chromosomal pro... +1 1119 1.2e-112 1 U51677 Human non-histone chromatin prote... +2 311 1.8e-107 4 X80457 M.musculus HMG1 gene +2 311 1.0e-105 4 Z95115 Human DNA sequence from BAC 445C9... +1 1047 8.8e-104 1 U21933 Xenopus laevis high mobility grou... +3 979 9.5e-98 1 Y00365 Chinese hamster HMG-1 gene for hi... +1 948 1.4e-94 1 X62534 H.sapiens HMG-2 mRNA +2 924 7.6e-92 1 J02895 Pig non-histone chromosomal prote... +3 923 1.1e-91 1 D84418 Rat mRNA for chromosomal protein ... +3 914 1.1e-90 1 Z46757 M.musculus mRNA for high mobility... +1 914 1.3e-90 1 M83235 Gallus gallus non-histone chromos... +2 910 2.8e-90 1 M80574 Gallus domesticus high-mobility g... +1 900 3.5e-89 1 D30765 Xenopus laevis mRNA for HMG-X pro... +3 871 3.8e-86 1 U31513 Ambystoma mexicanum high mobility... +1 868 8.1e-86 1 M83665 Human high mobility group 2 prote... +2 265 2.3e-82 4 X98857 L.fluviatilis mRNA for HMG protein +1 821 4.9e-81 1 X02666 Trout mRNA for high mobility grou... +1 824 5.5e-81 1 X63463 G.gallus HMG2a mRNA +1 814 4.2e-80 1 X67668 M.musculus mRNA for high mobility... +1 810 1.4e-79 1 AF022465 Mus musculus high mobility group ... +1 801 7.1e-79 1 Z17240 Homo sapiens for mRNA encoding HM... +1 800 1.3e-78 1 D14314 Chicken mRNA for HMG-1, complete ... +3 796 4.9e-78 1 Y10043 Homo sapiens mRNA for high mobili... +3 784 4.1e-77 1 L32859 Rainbow trout HMG-1 gene exons 2-... +3 257 1.1e-75 4 AF009343 Mus musculus HMG-like protein (Tr... +1 699 1.5e-71 2 D14718 Human chromosomal protein HMG1 re... +3 666 1.0e-64 1 U13881 Drosophila melanogaster DNA-bindi... +1 540 2.6e-51 1 X81456 D.melanogaster mRNA for an open r... +2 539 1.4e-50 1 L32954 Rainbow trout HMG-T2 gene exons 1... +3 227 3.0e-50 3 AF003626 Homo sapiens cosmids IM0525, LC12... +1 245 1.2e-49 3 M26110 Bovine high-mobility-group protei... +1 495 3.6e-46 1 L06453 Strongylocentrotus purpuratus (cl... +2 483 3.0e-45 1 X89811 D.melanogaster DNA for SSRP2 gene +1 201 9.4e-42 4 Z93931 Human DNA sequence from PAC 438G1... -3 264 3.0e-33 2 X80466 M.musculus HMG1-R-227 gene +1 331 3.7e-28 1 U22831 Caenorhabditis elegans cosmid F47... +3 203 1.2e-27 4 X66077 Z.mays MNB1b mRNA for DNA-binding... +3 308 2.0e-26 1 X58282 Maize mRNA for a high mobility gr... +1 308 2.1e-26 1 X80462 M.musculus HMG1-R-154 gene +1 307 1.3e-25 1 AC002526 Human PAC clone DJ0558L21 from Xq... +3 250 1.3e-24 2 Z11540 T.aestivum mRNA for high mobility... +2 289 2.1e-24 1 Y14071 Arabidopsis thaliana mRNA for HMG... +1 281 1.6e-23 1 Z71255 S.cerevisiae chromosome XVI 16553... -3 206 4.7e-23 2 U39747 Ipomoea nil high mobility group p... +3 269 3.0e-22 1 Z50799 H.vulgare mRNA for HMG1/2-like pr... +2 263 1.1e-21 1 AB000637 Canavalia gladiata mRNA for HMG-1... +2 263 1.5e-21 1 L12169 Japanese morning glory high mobil... +3 261 2.5e-21 1 Z21703 V.faba mRNA for HMG box. +1 260 2.8e-21 1 AF002226 Nicotiana tabacum DNA-binding pro... +2 260 3.0e-21 1 X80465 M.musculus HMG1-R-168 gene +2 219 1.8e-20 2 Y09482 A.thaliana mRNA for HMG 1 protein +1 252 2.2e-20 1 Y14073 Arabidopsis thaliana mRNA for HMG... +3 252 2.2e-20 1 Y14072 Arabidopsis thaliana mRNA for HMG... +1 251 3.0e-20 1 L42571 Cricetulus griseus ribosomal tran... +1 162 6.4e-20 2 L42570 Cricetulus griseus ribosomal tran... +1 162 7.0e-20 2 D14315 delta-crystallin enhancer binding... +3 248 9.9e-20 1 X76774 P.sativum mRNA for HMG1 protein +3 245 1.1e-19 1 L28094 Barley mRNA sequence. +3 244 1.2e-19 1 I14731 Sequence 10 from patent US 5451670. -2 249 1.8e-19 1 AJ002391 Solanum tuberosum mRNA for high m... +3 241 3.2e-19 1 S50213 HMG1-related DNA-binding protein ... +2 247 3.3e-19 1 M61725 Rat transcription factor UBF2 mRNA. +3 190 3.8e-19 2 M61726 Rat transcription factor UBF1 mRNA. +3 190 4.1e-19 2 X80467 M.musculus HMG1-R-87 gene +2 139 6.2e-19 2 X60831 Mouse ubf gene for transcription ... +3 197 6.8e-19 2 X56687 H.sapiens mRNA for autoantigen NO... +3 198 1.3e-18 2 X53390 Human mRNA for upstream binding f... +1 198 1.8e-18 2 X53461;X53260 Human mRNA for upstream binding f... +1 198 1.8e-18 2 U84139 Bos taurus structure-specific rec... +1 238 2.3e-18 1 X58245 Soybean mRNA for HMG-1 like protein +1 231 3.5e-18 1 X80460 M.musculus HMG1-R-135 gene +1 137 4.3e-18 2 L08815 Chicken CIIDBP (homologous to hum... +3 236 4.3e-18 1 X71139 D.melanogaster HMG-Z mRNA +1 230 5.8e-18 1 L08814 Rat CIIDBP (homologous to human S... +1 234 7.0e-18 1 I66609 Sequence 8 from patent US 5670621. +1 232 1.1e-17 1 Y08297 Z.mays mRNA for HMGc1 protein +2 226 1.2e-17 1 M86737 Human high mobility group box (SS... +2 232 1.4e-17 1 I66608 Sequence 6 from patent US 5670621. +2 232 1.4e-17 1 Y08807 Z.mays mRNA for HMG protein +1 222 3.3e-17 1 Y08298 Z.mays mRNA for HMGc2 protein +1 217 9.9e-17 1 M77023 Drosophila melanogaster high mobi... +3 216 1.1e-16 1 I66610 Sequence 9 from patent US 5670621. +1 220 1.5e-16 1 X71138 D.melanogaster HMG-D mRNA +1 216 3.2e-16 1 M93253 Chironomus tentans high mobility ... +2 211 6.9e-16 1 M74017 T.brucei rhodesiense HMG1-like pr... +1 214 9.9e-16 1 X80459 M.musculus HMG1-R-177 gene +1 119 1.1e-15 2 X15317 Yeast NHP6A gene for nonhistone p... +1 206 2.0e-15 1 Y14074 Arabidopsis thaliana mRNA for HMG... +1 205 2.2e-15 1 X57201 X.laevis xUBFbeta2 mRNA for upstr... +2 148 2.6e-15 2 X97906 V.faba mRNA for transcription fac... +2 209 3.6e-15 1 M95912 Saccharomyces cerevisiae N-acetyl... -1 206 6.3e-15 1 X15318 Yeast NHPB gene for nonhistone pr... +1 198 9.4e-15 1 Z49219;U00094 S.cerevisiae chromosome XVI cosmi... -3 206 1.2e-14 1 X59863 X.laevis xUBFalpha1 mRNA for upst... +3 181 1.8e-14 2 U00049 Caenorhabditis elegans cosmid C18... +3 203 2.4e-14 1 X68408 D.melanogaster SSRP1 mRNA +3 201 2.7e-14 1 I66611 Sequence 10 from patent US 5670621. +3 201 2.7e-14 1 X57561 X.laevis xUBF mRNA for RNA polyme... +2 180 3.1e-14 2 Z35959;Y13134 S.cerevisiae chromosome II readin... -3 198 3.5e-14 1 L08825 Drosophila melanogaster single-st... +1 196 9.3e-14 1 U80736 Homo sapiens CAGF9 mRNA, partial ... +1 184 1.7e-12 1 X80461 M.musculus HMG1-R-145 gene +1 130 2.1e-12 2 L31630 Plasmodium falciparum (clone: D10... +1 171 1.6e-11 1 AF000195 Caenorhabditis elegans cosmid C32... -1 134 7.6e-11 2 M73820 Mouse sex-limited protein (SlpA) ... +2 159 1.5e-10 2 M64933 Mouse nonfunctional sex-limited p... +1 162 1.5e-10 2 M93254 Chironomus tentans high mobility ... +1 160 1.9e-10 1 X80464 M.musculus HMG1-R-161 gene +1 160 4.6e-10 1 U01348 Rattus norvegicus clone B-0/7 ary... -1 159 6.1e-10 1 U01343 Rattus norvegicus clone A-1 aryla... -1 159 6.2e-10 1 U01345 Rattus norvegicus clone A-3 aryla... -2 155 6.4e-10 1 U10401 Caenorhabditis elegans cosmid T20B12 -1 128 9.6e-10 2 Z48008;Z71256 S.cerevisiae chromosome IV cosmid... -2 159 1.1e-09 1 X53858 Rat TTF-1 mRNA for thyroid nuclea... -1 150 3.3e-09 2 J03998 P.falciparum glutamic acid-rich p... +3 156 3.5e-09 1 M81360 Babesia bovis non-histone protein... +3 147 5.4e-09 1 D86076 Xenopus laevis oocyte mRNA for DN... +2 155 5.5e-09 1 D83650 Xenopus laevis mRNA for XLS13A pr... +2 155 5.5e-09 1 Y14075 Arabidopsis thaliana mRNA for HMG... +1 144 8.3e-09 1 Z29356 Gallus domesticus of h71t7 gene e... +3 147 9.2e-09 1 E08995 DNA encoding a protein involved i... +1 154 1.2e-08 1 L22300 Chilo iridescent virus type 6 zin... +3 143 1.3e-08 2 X53025 P.falciparum DNA for erythrocyte ... +2 145 1.4e-08 1 U05269 Brugia malayi high mobility group... +2 145 1.5e-08 1 M55020;M37081 Rat nucleolin gene. +1 154 1.7e-08 1 U53810 Toxoplasma gondii GAA trinucleoti... +2 151 1.7e-08 1 X73481 D.hydei Dhmst101 (2) gene +1 154 1.7e-08 1 U65487;L21182 Human ribosomal RNA upstream bind... +3 102 1.7e-08 3 M63424 Tetrahymena thermophila high-mobi... +1 147 3.7e-08 1 M17440;J05095 Mouse MHC (H-2) S region compleme... -1 152 4.3e-08 1 U83985 Rattus norvegicus alpha 1B adrene... +2 137 4.8e-08 1 M17284 Mouse transcriptional control ele... +1 138 6.2e-08 1 S72345 RI beta =cAMP-dependent protein k... -3 147 6.2e-08 2 AJ223169 Saccharomyces cerevisiae mRNA for... +1 148 9.7e-08 1 M73753 Saccharomyces cerevisiae mitochon... +2 148 1.1e-07 1 X80463 M.musculus HMG1-R-159 gene +3 137 1.3e-07 1 AB006705 Arabidopsis thaliana genomic DNA,... +3 149 1.7e-07 2 Z48952;Z71257 S.cerevisiae chromosome XIII cosm... +3 148 2.1e-07 1 D13491 A.thaliana mRNA for high mobility... +2 147 2.1e-07 1 AC004155 Mus musculus DNA from BAC 10818 c... +3 148 2.2e-07 1 U05314 Saccharomyces cerevisiae nuclear ... +3 147 2.3e-07 1 D37935 Yeast DNA for RNA binding protein... +1 147 2.3e-07 1 M81784 Rattus norvegicus K+ channel mRNA... +3 146 3.4e-07 1 A12522 Ag169 clone -1 143 3.5e-07 1 X76589 H.sapiens DNA 3' flanking simple ... +1 132 3.7e-07 1 E10125 DNA encoding an immunogenicity pr... +1 145 4.2e-07 1 M10296 Mouse DNA with homology to EBV IR... +3 129 4.4e-07 1 AL009197 S.pombe chromosome I cosmid c10F6. -3 142 4.4e-07 2 Z50100 H.vulgare GAA-satellite DNA +2 130 4.5e-07 1 L16900 Yeast intrastrand crosslink recog... +3 145 4.8e-07 1 I66612 Sequence 12 from patent US 5670621. +1 145 4.9e-07 1 E10126 DNA encoding an immunogenicity pr... +1 145 4.9e-07 1 Z28032;Y13137 S.cerevisiae chromosome XI readin... -1 145 4.9e-07 1 U53154 Caenorhabditis elegans cosmid C33G8. +3 144 5.3e-07 2 X71622 S.cerevisiae DNA sequence for Kaz... -1 145 5.6e-07 1 M15825 Chinese hamster nucleolin (C23) m... +1 144 5.9e-07 1 L22660 Rat polymeric immunoglobulin rece... +1 129 6.3e-07 1 AF040950 Mus musculus killer cell inhibito... -3 142 6.3e-07 1 U00762 Rattus norvegicus clone1 polymeri... +1 129 6.4e-07 1 Y15491 Pongo pygmaeus gene encoding fert... +1 144 6.5e-07 1 U00763 Rattus norvegicus clone2 polymeri... +3 129 6.8e-07 1 U01145 Rattus norvegicus clone 923 polym... +3 127 6.8e-07 1 X72957 X.laevis mRNA for nucleolin +1 134 6.9e-07 2 AC004073 Human Chromosome X, complete sequ... +2 144 8.0e-07 1 U93872 Kaposi's sarcoma-associated herpe... -3 144 8.0e-07 1 X54504 D. melanogaster mRNA for troponin... +2 142 8.8e-07 1 L13025 Rattus norvegicus (clone 2) mRNA ... +3 129 9.7e-07 1 M24398 Human parathymosin mRNA, complete... +1 141 9.8e-07 1 AB002381 Human mRNA for KIAA0383 gene, par... +2 143 1.0e-06 1 U09820 Human helicase II (RAD54L) mRNA, ... +3 143 1.0e-06 1 M10668 Mouse DNA with homology to EBV IR... +2 126 1.0e-06 1 U72938 Human putative DNA dependent ATPa... +2 143 1.1e-06 1 U72937 Human putative DNA dependent ATPa... +2 143 1.1e-06 1 U75653 Human zinc finger helicase (Znf-H... +1 143 1.1e-06 1 U72936 Human putative DNA dependent ATPa... +1 143 1.1e-06 1 U12534 Gallus gallus Sox11 transcription... +1 124 1.1e-06 2 M60858;J05584 Human nucleolin gene, complete cds. +2 143 1.1e-06 1 AF000299 Caenorhabditis elegans cosmid E03... +1 143 1.1e-06 1 X78993 S.cerevisiae genomic DNA 70kb reg... -3 143 1.1e-06 1 Z73514;U00094 S.cerevisiae chromosome XVI readi... -3 142 1.2e-06 1 L40039 Gallus gallus GAA microsatellite ... +1 126 1.2e-06 1 AJ000496 Rattus norvegicus mRNA for cyclic... +2 142 1.3e-06 1 X17093 Human HLA-F gene for human leukoc... +2 142 1.3e-06 1 J05138 Rabbit calcium binding protein (c... +1 141 1.4e-06 1 M32294 Human Ro ribonucleoprotein autoan... +1 141 1.4e-06 1 I09500 Sequence 4 from patent WO 8909273. +1 141 1.4e-06 1 M84739 Human autoantigen calreticulin mR... +1 141 1.4e-06 1 Y13901 Homo sapiens FGFR-4 gene -2 142 1.5e-06 1 M57718;M33937 Rat cytochrome P-450 IV A1 (CYP4A... -3 142 1.5e-06 1 X96770 S.cerevisiae chromosome XVI, left... -1 142 1.5e-06 1 AF005370 Alcelaphine herpesvirus 1 L-DNA, ... -2 142 1.5e-06 1 L34363 Human X-linked nuclear protein (X... +3 141 1.8e-06 1 M18837 Mouse MHC class I Q4 beta-2-micro... -1 141 1.8e-06 1 X63507;S42523;S42569 M.musculus HOX-3.5 gene -1 141 1.9e-06 1 U88309 Caenorhabditis elegans cosmid T23B3. -2 141 2.0e-06 1 AF034569 Mus musculus anticoagulant protei... +2 137 2.0e-06 2 X64743;S37462 G.gallus RSFR mRNA +3 137 2.1e-06 1 M14483 Human prothymosin alpha mRNA, com... +1 123 2.2e-06 1 L81783 Homo sapiens (subclone 9_d11 from... +3 140 2.3e-06 1 U40719 Rattus norvegicus S-adenosylmethi... +3 140 2.4e-06 1 L21693 Human (clone pHG2) prothymosin al... +1 123 3.2e-06 1 M14794 Human prothymosin alpha mRNA, lym... +3 123 3.2e-06 1 D78176 Mouse DNA for primary transcript ... +2 138 3.8e-06 1 X79327 R.norvegicus (Sprague Dawley) cal... +2 137 4.4e-06 1 L05517 Plasmodium chabaudi DNA sequence,... +1 137 4.5e-06 1 X07699 Mouse nucleolin gene +1 138 4.8e-06 1 D78308 Rat mRNA for calreticulin, comple... +1 137 4.8e-06 1 M92988 Mouse calregulin (ERp60) mRNA, co... +3 137 4.8e-06 1 X53363 Rat mRNA for calreticulin +3 137 4.8e-06 1 X14926 Mouse mRNA for calreticulin +1 137 5.1e-06 1 S79240 Lox4=Ultrabithorax/abdominal-A ho... +2 137 5.2e-06 1 X17199 Chicken mRNA for nucleolin C23 +2 137 5.4e-06 1 X16481 Rat mRNA for zinc(2+) binding pro... +2 128 5.8e-06 2 X54171;X53282 H.sapiens NG2-6 DNA +2 137 6.3e-06 1 L13238 Rattus norvegicus polymeric immun... +1 124 6.6e-06 1 L13200;L18807 C. elegans cosmid ZK1236. +1 137 6.8e-06 1 AB001489 Mus musculus DNA for polyimmunogl... +2 137 6.8e-06 1 U59897 Macropus robustus hypoxanthine ph... +3 135 6.9e-06 1 Z97055 Human DNA sequence from PAC 388M5... -3 137 6.9e-06 1 L21696 Human (clone pHG5) prothymosin al... +1 120 7.2e-06 1 U93275 Mus musculus glucokinase gene, 5'... +1 136 7.2e-06 1 U52064 Kaposi's sarcoma-associated herpe... +1 136 7.7e-06 1 U08110 Mus musculus RNA1 homolog (Fug1) ... +2 125 8.4e-06 2 D38613 Mouse 921-L mRNA for presynaptic ... +3 122 8.8e-06 2 U02506 Rattus norvegicus clone 7 polymer... +2 130 8.9e-06 1 U35323 Mus musculus H2-M alpha chain (H2... -3 136 9.0e-06 1 AD000092 Homo sapiens DNA from chromosome ... +1 136 9.1e-06 1 U75698 Kaposi's sarcoma-associated herpe... -3 136 9.1e-06 1 AC004015 Human BAC clone RG333F24 from 7q1... -2 136 9.1e-06 1 M35983 Rat ID-A element in the S-100 bet... +3 121 9.2e-06 1 L21694 Human (clone pHG3) prothymosin al... +1 119 9.4e-06 1 U08273 Rattus norvegicus Wistar polymeri... +2 133 9.8e-06 1 Z69727 S.pombe chromosome I cosmid c4G9. -3 125 1.1e-05 3 M60665 Rat prothymosin-alpha mRNA, 5' end. +3 117 1.2e-05 1 U95743 Homo sapiens chromosome 16 BAC cl... +1 135 1.2e-05 1 X69986 R.norvegicus gene for GABAA recep... +1 134 1.4e-05 1 X07453;X66268 Plasmodium falciparum 11-1 gene p... +2 134 1.4e-05 1 D14636 Mouse mRNA for PEBP2a1 protein, c... -1 134 1.5e-05 1 A42910 Sequence 42 from Patent WO9502701. +3 118 1.5e-05 1 AF025664 Bos taurus Na-Ca+K exchanger (BOS... +3 126 1.5e-05 2 AL010164 Plasmodium falciparum DNA *** SEQ... -1 134 1.6e-05 1 Z20656 Homo sapiens of cardiac alpha-myo... +1 134 1.6e-05 1 AF027865 Mus musculus Major Histocompatibi... -3 135 1.6e-05 2 AC000399 Genomic sequence from Mouse 9, co... -3 134 1.6e-05 1 U72731 Acipenser fulvescens microsatelli... +1 116 1.8e-05 1 Z99753 S.pombe chromosome I cosmid c23C4. +3 117 1.8e-05 2 X98881 D.melanogaster mRNA for nuclear h... +2 133 1.8e-05 1 AC000022 Genomic sequence from Human Y, co... +1 133 2.1e-05 1 U95739 Human chromosome 16p11.2-p12 BAC ... +2 133 2.1e-05 1 AB006702 Arabidopsis thaliana genomic DNA,... -3 133 2.1e-05 1 Z92547 Human DNA sequence from PAC 863K1... +2 133 2.1e-05 1 X83976 G.gallus repetitive DNA (ID:Ggamc1) +2 116 2.5e-05 1 L13462 Bovine calreticulin (brain isofor... +1 131 2.5e-05 1 AF025480 Bison bison Na-Ca+K exchanger (BI... +1 115 2.7e-05 2 U07886 Rattus norvegicus clone 15 polyme... +1 130 2.8e-05 1 M33025 Rattus norvegicus parathymosin mR... +3 114 3.2e-05 1 M20616 Rat spleen parathymosin-alpha mRN... +3 114 3.2e-05 1 L37092 Mus musculus cyclin-dependent kin... +2 131 3.2e-05 1 AF026132 Homo sapiens retinal rod Na+/Ca+,... +1 131 3.2e-05 1 AC001069 Homo sapiens (subclone 1_e1 from ... +1 131 3.2e-05 1 M63425 Tetrahymena thermophila high-mobi... +1 125 3.3e-05 1 U23752 Human SOX-11 mRNA, complete cds. +1 110 3.4e-05 2 J03902 Plasmodium falciparum p101/acidic... +1 131 3.4e-05 1 AB002322 Human mRNA for KIAA0324 gene, par... -3 131 3.5e-05 1 Z95620 S.pombe chromosome II cosmid c3D6. +1 134 3.6e-05 2 Z82196 Human DNA sequence from PAC 288L1 -1 131 3.8e-05 1 AC003664 Homo sapiens chromosome 17, clone... -3 131 3.8e-05 1 M15514 P.falciparum acidic basic repeat ... +1 128 4.1e-05 1 A12521 Ag189 clone +1 128 4.1e-05 1 U88154 Human proline and glutamic acid r... +1 130 4.2e-05 1 U88153 Human p160 mRNA, complete cds. +1 130 4.3e-05 1 AF004294 Mus musculus myelin transcription... +1 130 4.5e-05 1 U88172 Caenorhabditis elegans cosmid ZK354. -3 130 4.9e-05 1 U65590 Homo sapiens IL-1 receptor antago... -1 130 4.9e-05 1 AL021812 Human DNA sequence from cosmid U8... -1 130 5.0e-05 1 L13297 Rattus norvegicus tandem repeat m... +1 116 5.0e-05 1 Z28410 C.roseus mRNA for HMG protein. +1 129 5.0e-05 1 M26549;J05039 Human alpha-1 collagen type IV ge... -1 112 5.1e-05 1 X67597 X.laevis mRNA for calreticulin (c... +1 128 5.3e-05 1 X66481 B.taurus mRNA for Na/Ca,K-exchanger +2 126 5.9e-05 2 U01087 Drosophila melanogaster Canton S ... +3 129 6.0e-05 1 M64239 Mouse T-cell receptor alpha/delta... -1 131 6.2e-05 2 L20955 Human promthymosin alpha (PTMA) g... +1 112 6.2e-05 1 U19755 Mus domesticus thyroid transcript... -2 129 6.4e-05 1 AF043692 Caenorhabditis elegans cosmid C17F3. +2 131 6.9e-05 2 J04802 Human prothymosin-alpha pseudogen... +1 123 7.3e-05 1 L38856 Glycine max nucleosome assembly p... +1 127 7.4e-05 1 Z73546;U00094 S.cerevisiae chromosome XVI readi... -1 128 7.8e-05 1 E09676 cDNA encoding mouse mC26. +2 128 8.0e-05 1 D16108 Mouse mC26 gene for GlyCAM-1, exo... +2 128 8.0e-05 1 Y07738 M.musculus gene for vimentin -3 128 8.4e-05 1 AL021127 Mus musculus cosmid CMX137 contai... -3 112 8.5e-05 2 U35728 Xenopus laevis transcription fact... +3 127 8.6e-05 1 Z93389 Caenorhabditis elegans cosmid T13F3 +2 128 8.6e-05 1 Z81048 Caenorhabditis elegans cosmid C41G7 -2 128 8.7e-05 1 L15351 Mesocricetus auratus alpha-cardia... -1 128 8.7e-05 1 AC004044 Arabidopsis thaliana BAC T5J8 fro... +3 128 8.8e-05 1 U04817 Human protein kinase PITSLRE alph... +1 127 9.1e-05 1 X69838;S57461 H.sapiens mRNA for G9a +3 127 9.8e-05 1 X87461 M.merlangus DNA (CA)n (GGA)n poly... +3 111 0.00010 1 M60664 Rat prothymosin-alpha mRNA, 5' end. +3 109 0.00010 1 J02722;M12129 Rat heme oxygenase gene, complete... -3 127 0.00011 1 Z68332 Human DNA sequence from cosmid V7... -1 117 0.00011 3 Z83122 Caenorhabditis elegans cosmid R11A5 +3 127 0.00011 1 S38627 {pseudogene} PTMAP5=prothymosin a... +3 123 0.00011 1 AC002078 Human BAC clone RG111H14 from 7q2... -2 127 0.00011 1 AC002287 Homo sapiens Chromosome 16 BAC cl... +1 127 0.00012 1 M32612 Rat neural cell adhesion molecule... +3 125 0.00012 1 D78590 Rana rugosa mRNA for calnexin, co... +2 106 0.00012 2 U07704 Human protein kinase PITSLRE isof... +1 126 0.00012 1 U04816 Human protein kinase PITSLRE alph... +1 126 0.00012 1 U04824 Human protein kinase PITSLRE alph... +1 126 0.00012 1 U72915 Human putative DNA dependent ATPa... +3 110 0.00012 1 U20857 Mus musculus RNA1 homolog (Fug1) ... +1 125 0.00014 1 AF029696 Sus scrofa SOX-9 protein mRNA, co... +1 125 0.00015 1 AL021332 Human DNA sequence from PAC 398A1... +1 126 0.00015 1 S57428 thymidine kinase {p53 binding fra... -1 110 0.00015 1 U07705 Human protein kinase PITSLRE isof... +1 125 0.00016 1 AF006040 Mus musculus Fas-binding protein ... +1 112 0.00017 2 AF030001 Mus musculus major histocompatibi... +3 122 0.00017 2 U35612 Homo sapiens SOX22 protein (SOX22... +3 109 0.00017 2 Z46629 Homo sapiens SOX9 mRNA. +3 125 0.00018 1 L32832 Homo sapiens zinc finger homeodom... +2 125 0.00019 1 Z75553 Caenorhabditis elegans cosmid ZC443 -3 125 0.00020 1 M26708 Human prothymosin alpha mRNA (Pro... +3 123 0.00020 1 Z82052 Caenorhabditis elegans cosmid T25E12 -2 125 0.00020 1 AL008725 Human DNA sequence from PAC 148E2... +3 125 0.00020 1 AC002044 Homo sapiens Chromosome 16 BAC cl... +3 125 0.00020 1 M24496;M21497 Mouse neurofilament largest subun... +3 124 0.00022 1 M86518 Plasmodium falciparum high mobili... +3 122 0.00022 1 L27124 Rattus sp. NRD convertase (NRDC) ... +2 124 0.00023 1 U19361 Petromyzon marinus neurofilament ... +2 124 0.00023 1 X93208 Rattus sp. mRNA for NRD2 convertase +2 124 0.00023 1 M69249 Mouse lipocortin I gene, upstream... -2 123 0.00023 1 M35131 Mouse neurofilament component (NF... +1 124 0.00023 1 Z31012 M.musculus (Swiss-Webster) NF-H g... +2 124 0.00023 1 Y14822 Mus musculus mRNA containing B1 e... -1 119 0.00024 1 Z35957;Y13134 S.cerevisiae chromosome II readin... -2 123 0.00024 1 Y11666 M.musculus gene encoding hexokina... -2 124 0.00024 1 AL009007 Plasmodium falciparum DNA *** SEQ... +1 124 0.00025 1 Y07542 X.laevis mRNA for SOX3 protein +1 123 0.00025 1 Z48483 S.cerevisiae chromosome XVI cosmi... -2 124 0.00026 1 U33335;U00094 Saccharomyces cerevisiae chromoso... -1 124 0.00026 1 Z50797 Caenorhabditis elegans cosmid T22H6 -1 124 0.00026 1 AB009050 Arabidopsis thaliana genomic DNA,... +3 124 0.00026 1 S41694 {pseudogene} PTMAP2=prothymosin a... +1 122 0.00027 1 L07944 Plasmodium falciparum secreted po... +1 123 0.00027 1 M86310 Alligator ADW2 gene, partial cds. +1 108 0.00027 1 X63091 X.laevis mRNA for nucleolin +1 123 0.00028 1 U13695 Human homolog of yeast mutL (hPMS... +3 123 0.00029 1 AC000043 Human Chromosome 22q13 Cosmid Clo... +3 123 0.00030 1 D83256 Rainbow trout mRNA for SoxP1, com... +1 123 0.00030 1 S76368 ORF 5' of ECLF2...ECRF3=G protein... -3 123 0.00030 1 L27592 Plasmodium chabaudi adami erythro... +3 122 0.00031 1 AF004295 Mus musculus myelin transcription... +3 123 0.00031 1 X73480 D.hydei Dhmst101 (1) mRNA +2 122 0.00033 1 L12020 Chelydra serpentina sex determini... +1 107 0.00034 1 L12022 Chelydra serpentina sex determini... +1 107 0.00034 1 Z81053 Caenorhabditis elegans cosmid E02A10 -2 123 0.00034 1 M86409 Herpesvirus saimiri the most thre... -3 123 0.00035 1 AF003627 Homo sapiens cosmids Qc5E3, LC183... +1 123 0.00035 1 U49178 Bos taurus 60.1 kDa protein kinas... +3 122 0.00035 1 X64346 Herpesvirus saimiri complete geno... -1 123 0.00035 1 M86337 Gecko MG42 gene, partial cds. +1 107 0.00035 1 L07107 Mus musculus HMG box protein mRNA... +1 119 0.00036 1 U20951 Cricetulus griseus centromere aut... +3 122 0.00037 1 Z28201;Y13137 S.cerevisiae chromosome XI readin... -1 122 0.00037 1 AJ001183 Homo sapiens mRNA for Sox10 protein +1 122 0.00037 1 U66141 Mus musculus transcription factor... +3 122 0.00038 1 AF017182 Mus musculus putative transcripti... +2 122 0.00038 1 U63858 Mus musculus mitochondrial transc... +2 119 0.00038 1 Y00500 Mouse glandular kallikrein gene -3 122 0.00040 1 X55038 Mouse mCENP-B gene for centromere... +3 122 0.00040 1 J04799 Human prothymosin-alpha pseudogen... +2 121 0.00040 1 D83006 Yeast DNA for MNN4 gene, complete... +2 122 0.00040 1 U12533 Gallus gallus Sox9 transcription ... +3 121 0.00041 1 I20206 Sequence 21 from patent US 5514546. -2 107 0.00041 1 M18061 Xenopus laevis vitelloginin gene,... -3 122 0.00042 1 X15147 Mouse Tla region T1c pseudogene f... -2 122 0.00043 1 AL010226 Plasmodium falciparum DNA *** SEQ... -3 122 0.00044 1 Y00354 Xenopus laevis gene for vitelloge... -2 122 0.00045 1 AB010266 Mus musculus Creb-rp, Tnx and Cyp... +3 122 0.00046 1 AC002464 Human BAC clone RG331P03, complet... -2 122 0.00046 1 AE000665;AE000522 Mus musculus TCR beta locus from ... -1 122 0.00046 1 M86313 Alligator AES1 gene, partial cds. +1 106 0.00046 1 X96469 X.laevis mRNA for C4SR protein +1 120 0.00047 1 M20481 Mouse brain neurofilament-M mRNA,... +1 117 0.00049 1 U31600 Heliocidaris erythrogramma HEHBOX... -2 120 0.00050 1 AJ001029 Rattus norvegicus mRNA for Sox10 ... +1 121 0.00050 1 Y07569 H.sapiens mRNA for PHAPI2a protein +2 119 0.00054 1 X15750;X15209 Rabbit skeletal muscle mRNA for r... +3 121 0.00058 1 X15209 O.cuniculus mRNA for skeletal mus... +3 121 0.00058 1 U40059 Caenorhabditis elegans cosmid K03C7. +2 121 0.00059 1 M30298;J05078 Rat cardiac myosin light chain 2 ... -2 114 0.00059 1 AF047659 Caenorhabditis elegans cosmid K07H8. -2 121 0.00059 1 AC002497 Human Cosmid g1940a142 from 7q31.... +3 121 0.00059 1 L04508 Plasmodium berghei heat shock rel... +1 120 0.00060 1 D87209 Xenopus laevis mRNA for XLS13B pr... +3 120 0.00065 1 U63859 Mus musculus mitochondrial transc... +2 119 0.00065 1 Y07969 H.sapiens mRNA for APRIL protein +3 119 0.00067 1 AL008970 Plasmodium falciparum DNA *** SEQ... -2 112 0.00068 2 U57939 Mus musculus mitochondrial transc... +1 119 0.00069 1 L21710 Plasmodium berghei 58 kDa phospho... +1 118 0.00069 1 U70439 Human silver-stainable protein SS... +1 119 0.00069 1 A50142 Sequence 1 from Patent WO9611267. +1 119 0.00069 1 M33024 xattus norvegicus prothymosin-alp... +3 117 0.00071 1 M20035 Rat prothymosin-alpha mRNA, compl... +3 117 0.00071 1 Y00092 Chicken mRNA for progesterone rec... +1 120 0.00071 1 X90849 G.gallus PB1 gene +1 120 0.00072 1 U72736 Acipenser fulvescens microsatelli... +2 115 0.00073 1 M31104;J05240 Chicken progesterone receptor gen... +2 120 0.00074 1 U12825 Saccharomyces cerevisiae transcri... +3 119 0.00076 1 M95789 Plasmodium chabaudi acidic phosph... +2 119 0.00076 1 L12013 Chelydra serpentina sex determini... +1 104 0.00076 1 M86315 Alligator AES4 gene, partial cds. +1 104 0.00078 1 J04943 Rat nucleolar protein B23.2 mRNA,... +1 118 0.00080 1 M12865 Yeast (S.cerevisiae) CAT repetiti... -3 104 0.00081 1 M25062 Rat nucleolar protein B23.1 mRNA,... +2 118 0.00084 1 J03969 Rat nucleolar protein B23 mRNA, c... +2 118 0.00084 1 Z28028;Y13137 S.cerevisiae chromosome XI readin... +1 119 0.00086 1 M87306 Tetrahymena thermophila micronucl... +1 119 0.00087 1 AF035263 Mus musculus BAF57 (Baf57) gene, ... +3 118 0.00090 1 X65657;S45834 M.musculus (testis) Sox-5 mRNA +3 109 0.00091 2 M37518 Chicken progesterone receptor mRN... +3 119 0.00092 1 X05640 Mouse NF-M gene for middle-molecu... +1 117 0.00093 2 M69183 Plasmodium falciparum (MESA) mRNA... +1 119 0.00093 1 AF035262 Homo sapiens BAF57 (BAF57) gene, ... +3 118 0.00094 1 D29711 Rice mRNA, partial homologous to ... +1 102 0.00097 1 X82260 H.sapiens mRNA for RanGTPase acti... +1 118 0.0010 1 U51243 Human alpha-albumin gene, complet... +1 119 0.0010 1 M86312 Alligator ADW5 gene, partial cds. +1 103 0.0010 1 M86338 Gecko MG43 gene, partial cds. +1 103 0.0010 1 Z82186 Human DNA sequence from Fosmid 49... +1 119 0.0010 1 Z82076 Caenorhabditis elegans cosmid W07G1 -3 119 0.0010 1 Z49939;Z71257 S.cerevisiae chromosome XIII cosm... -3 119 0.0010 1 Z49908 Caenorhabditis elegans cosmid C07E3 -1 119 0.0010 1 S79939 Prm3=protamine [rats, testis, mRN... +1 111 0.0010 1 M86564;M38736;M55393 Rat alpha-prothymosin mRNA, compl... +3 117 0.0011 1 X55326 R.rattus mRNA for alpha-prothymosin +3 117 0.0011 1 X56135 Mouse mRNA for prothymosin alpha +3 117 0.0011 1 M14630 Human prothymosin alpha mRNA, com... +1 117 0.0011 1 M55017;M37081 Rat nucleolin gene. +1 116 0.0011 1 D78589 Rana rugosa mRNA for calreticulin... +1 118 0.0011 1 M33212 Mouse nucleolar protein N038 mRNA... +1 117 0.0011 1 L14320 Bovine herpesvirus type 1 early-i... +3 117 0.0011 2 U95740 Human chromosome 16p13.1 BAC clon... -1 120 0.0012 2 L13236 Rattus norvegicus polymeric immun... +1 105 0.0012 1 M12658 Mouse 4.5S RNA gene. +3 118 0.0012 1 X91619 R.norvegicus mRNA for sca1 protein -1 118 0.0013 1 X05496 Xenopus laevis mRNA for nucleolar... +3 116 0.0013 1 X86381 P.paniscus SRY gene +1 113 0.0013 1 U97085 Homo sapiens X-linked nuclear pro... +2 115 0.0013 1 M86314 Alligator AES2 gene, partial cds. +1 102 0.0013 1 D26046 Mouse mRNA for AT motif-binding f... +2 118 0.0013 1 S51239 calreticulin [Aplysia californica... +1 117 0.0013 1 AC003994 Mouse cosmid ma53a271 from 14D1-D... +3 118 0.0014 1 Z47378 O.cuniculus mRNA for neurofilamen... +3 113 0.0014 2 X05299 Human mRNA (~95%) for major centr... +1 117 0.0015 1 U88047 Homo sapiens DNA binding protein ... +3 117 0.0015 1 U85970 Xenopus laevis middle molecular w... +1 117 0.0015 1 AF044914 Arabidopsis thaliana putative his... +1 115 0.0015 1 Y00067 Human gene for neurofilament subu... +2 115 0.0015 2 X55039 Human hCENP-B gene for centromere... +3 117 0.0015 2 U14974 Saccharomyces cerevisiae Nmd2p (N... +1 117 0.0016 1 U48809 Rattus norvegicus neural zinc fin... +3 117 0.0016 1 U35655 Ovis aries centromere protein B (... +1 116 0.0016 1 U28158 Saccharomyces cerevisiae Ifs1p (I... +2 117 0.0016 1 U12137 Saccharomyces cerevisiae Upf2p (U... +1 117 0.0016 1 U81289 Pisum sativum NAP1Ps mRNA, comple... +2 116 0.0016 1 V01144 Sea urchin (P. miliaris) gene for... +1 117 0.0017 1 X13484;X15991;X15992 Mouse DNA for beta-casein -2 117 0.0017 1 S41695 {pseudogene} PTMAP3=prothymosin a... +3 112 0.0018 1 U10556;U00093 Saccharomyces cerevisiae chromoso... -3 117 0.0018 1 AC002410 Human BAC clone RG264L19 from 7p1... +2 117 0.0018 1 U89959 Arabidopsis thaliana BAC T7I23, c... -2 117 0.0018 1 Z95704 Human DNA sequence from 4PTEL, Hu... +1 117 0.0018 1 AJ004801 Bovine herpesvirus 1 complete gen... +2 117 0.0018 1 U19717 Mus musculus cGMP-gated cation ch... +1 116 0.0018 1 Z97342 Arabidopsis thaliana DNA chromoso... -2 121 0.0018 2 U76758 Mus musculus erythroid ankyrin an... -1 112 0.0019 1 D78303 Rattus norvegicus brain mRNA, com... +2 116 0.0020 1 AB006448 Oncorhynchus mykiss SOX9 mRNA, co... +3 116 0.0020 1 M10239 Mouse DNA with homology to EBV IR... +2 114 0.0020 1 U12858 Arabidopsis thaliana Col-0 nucleo... +2 115 0.0020 1 M10667 Mouse DNA with homology to EBV IR... +1 113 0.0020 1 AL010252 Plasmodium falciparum DNA *** SEQ... -3 116 0.0021 1 X71422 M.musculus Hoxd-11 gene -2 116 0.0021 1 M18628 Rat NF-M middle molecular weight ... +2 111 0.0022 2 L22219 Plasmodium falciparum transmissio... +3 116 0.0022 1 L08135 Plasmodium falciparum transmissio... +2 116 0.0022 1 WARNING: Descriptions of 1638 database sequences were not reported due to the limiting value of parameter V = 500. >X12597 Human mRNA for high mobility group-1 protein (HMG-1). Length = 1009 Plus Strand HSPs: Score = 1144 (402.7 bits), Expect = 4.8e-115, P = 4.8e-115 Identities = 214/214 (100%), Positives = 214/214 (100%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 56 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 235 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 236 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 415 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 416 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 595 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE Sbjct: 596 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 697 >X12796 Bovine mRNA for high mobility group 1 (HMG1) protein Length = 1236 Plus Strand HSPs: Score = 1140 (401.3 bits), Expect = 1.0e-114, P = 1.0e-114 Identities = 213/214 (99%), Positives = 214/214 (100%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 122 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 301 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 302 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 481 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 482 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 661 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEEEDEEDEEDEEEEEDEEDE+EEEDDDDE Sbjct: 662 KKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE 763 >Z11997 M.musculus mRNA for non-histone chromosomal high-mobility group 1 Length = 2231 Plus Strand HSPs: Score = 1137 (400.2 bits), Expect = 1.2e-114, P = 1.2e-114 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 76 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 255 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 256 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 435 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 436 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 615 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 616 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 717 >M21683;M21684 Pig nonhistone protein HMG1 mRNA, complete cds. Length = 2192 Plus Strand HSPs: Score = 1135 (399.5 bits), Expect = 2.0e-114, P = 2.0e-114 Identities = 212/214 (99%), Positives = 213/214 (99%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 12 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 191 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 192 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 371 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDK PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 372 IGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 551 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEEEDEEDEEDEEEEEDEEDE+EEEDDDDE Sbjct: 552 KKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE 653 >U00431 Mus musculus HMG-1 mRNA, complete cds. Length = 1308 Plus Strand HSPs: Score = 1137 (400.2 bits), Expect = 2.0e-114, P = 2.0e-114 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 149 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 328 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 329 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 508 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 509 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 688 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 689 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 790 >M64986 Rat amphoterin mRNA, complete cds. Length = 1225 Plus Strand HSPs: Score = 1137 (400.2 bits), Expect = 2.2e-114, P = 2.2e-114 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 126 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 305 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 306 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 485 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 486 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 665 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 666 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 767 >M63852 Rat high mobility group 1 protein synthetic gene, complete cds. Length = 924 Plus Strand HSPs: Score = 1137 (400.2 bits), Expect = 2.9e-114, P = 2.9e-114 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 92 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 271 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 272 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 451 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 452 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 631 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 632 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 733 >Y00463 Rat mRNA for high mobility group protein HMG1 Length = 825 Plus Strand HSPs: Score = 1137 (400.2 bits), Expect = 3.2e-114, P = 3.2e-114 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 31 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 210 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 211 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 390 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 391 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 570 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 571 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 672 >L38477 Mus musculus (clone Clebp-1) high mobility group 1 protein (HMG-1) Length = 1225 Plus Strand HSPs: Score = 1130 (397.8 bits), Expect = 1.2e-113, P = 1.2e-113 Identities = 211/214 (98%), Positives = 213/214 (99%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 77 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 256 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 257 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 436 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA KS Sbjct: 437 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAVKS 616 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 617 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 718 >D63874 Human mRNA for HMG-1, complete cds. Length = 1194 Plus Strand HSPs: Score = 1124 (395.7 bits), Expect = 5.3e-113, P = 5.3e-113 Identities = 211/214 (98%), Positives = 211/214 (98%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPR KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 80 GKGDPKKPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 259 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS Sbjct: 260 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 439 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKA KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 440 IGDVAKKLGEMWNNTAADDKQPYEKKAEKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 619 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKKEEEE EEDEEDEEEEEDEEDEDEEEDDDDE Sbjct: 620 KKKKEEEEGEEDEEDEEEEEDEEDEDEEEDDDDE 721 >L08048 Human non-histone chromosomal protein (HMG-1) retropseudogene. Length = 1814 Plus Strand HSPs: Score = 1119 (393.9 bits), Expect = 1.2e-112, P = 1.2e-112 Identities = 212/215 (98%), Positives = 212/215 (98%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKP GKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 661 GKGDPKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 840 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR PSAFFLFCSEYRPKIKGEHPGLS Sbjct: 841 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLS 1020 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS Sbjct: 1021 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 1200 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDE-DEEEDDDDE 214 KKKKEEEEDEEDEEDEEEEEDEEDE DEEEDDDDE Sbjct: 1201 KKKKEEEEDEEDEEDEEEEEDEEDEEDEEEDDDDE 1305 >U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, complete cds. Length = 2575 Plus Strand HSPs: Score = 311 (109.5 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107 Identities = 58/58 (100%), Positives = 58/58 (100%), Frame = +2 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK Sbjct: 971 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1144 Score = 303 (106.7 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107 Identities = 59/59 (100%), Positives = 59/59 (100%), Frame = +1 Query: 156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE Sbjct: 2146 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 2322 Score = 276 (97.2 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107 Identities = 50/54 (92%), Positives = 50/54 (92%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK 54 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK K Sbjct: 4 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLK 165 Score = 265 (93.3 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107 Identities = 52/56 (92%), Positives = 52/56 (92%), Frame = +3 Query: 50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP--SAFFL 103 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP S FL Sbjct: 330 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP*VSCLFL 497 Score = 80 (28.2 bits), Expect = 6.5e-31, Sum P(2) = 6.5e-31 Identities = 18/60 (30%), Positives = 30/60 (50%), Frame = +2 Query: 13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72 S++ F R + K +HP S+ + +KK E W +A +K +E A K +YE+ Sbjct: 971 SAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1144 Score = 65 (22.9 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29 Identities = 14/45 (31%), Positives = 22/45 (48%), Frame = +1 Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132 DP P+ S++ F R + K +HP S+ + +KK E W Sbjct: 13 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 147 Score = 42 (14.8 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24 Identities = 11/37 (29%), Positives = 19/37 (51%), Frame = +3 Query: 136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 +A +K +E A K +YE+++ Y K + KK Sbjct: 336 SAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKK 443 >X80457 M.musculus HMG1 gene Length = 2547 Plus Strand HSPs: Score = 311 (109.5 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105 Identities = 58/58 (100%), Positives = 58/58 (100%), Frame = +2 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK Sbjct: 1010 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1183 Score = 292 (102.8 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105 Identities = 56/59 (94%), Positives = 59/59 (100%), Frame = +2 Query: 156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE++EEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 1997 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDEEEDEEDEEEEEEEEDEDEEEDDDDE 2173 Score = 273 (96.1 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105 Identities = 49/49 (100%), Positives = 49/49 (100%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK Sbjct: 176 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 322 Score = 262 (92.2 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105 Identities = 49/49 (100%), Positives = 49/49 (100%), Frame = +2 Query: 50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP Sbjct: 470 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 616 Score = 110 (38.7 bits), Expect = 5.3e-56, Sum P(3) = 5.3e-56 Identities = 24/63 (38%), Positives = 43/63 (68%), Frame = +2 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 K A + K + D AA + K + +KK K E+ ++++EE++EE+EE+E+E+E+E+D Sbjct: 1997 KDIAAYRAKGKPD-AAKKGVVKAEKSKK---KKEEEDEEEDEEDEEEEEEEEDEDEEEDD 2164 Query: 205 EDE 207 +DE Sbjct: 2165 DDE 2173 Score = 85 (29.9 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30 Identities = 24/74 (32%), Positives = 36/74 (48%), Frame = +2 Query: 10 GKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR 69 G S++ F R + K +HP S+ + +KK E W +A +K +E A K + Sbjct: 1001 GFSSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 1174 Query: 70 YE--REMKTYIPPKGE 83 YE R M Y P G+ Sbjct: 1175 YEKVRRMTGY-PVLGD 1219 Score = 65 (22.9 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28 Identities = 14/45 (31%), Positives = 22/45 (48%), Frame = +2 Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132 DP P+ S++ F R + K +HP S+ + +KK E W Sbjct: 185 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 319 Score = 42 (14.8 bits), Expect = 9.8e-24, Sum P(2) = 9.8e-24 Identities = 11/37 (29%), Positives = 19/37 (51%), Frame = +2 Query: 136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 +A +K +E A K +YE+++ Y K + KK Sbjct: 476 SAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKK 583 >Z95115 Human DNA sequence from BAC 445C9 on chromosome 22q12.1. Length = 131,398 Plus Strand HSPs: Score = 1047 (368.6 bits), Expect = 8.8e-104, P = 8.8e-104 Identities = 199/210 (94%), Positives = 202/210 (96%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKK RGKMSS+AFF QTCRE HKKKHPDASVN SEFSKKCSERWKTMSAKEKGKFED Sbjct: 58000 KGDPKKLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKFED 58179 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADKA YEREMKTYIPPKGETKKKFKDPNAPKR PSAFFLFCS YRPKIKGEHPGLSI Sbjct: 58180 MAKADKAHYEREMKTYIPPKGETKKKFKDPNAPKRTPSAFFLFCSAYRPKIKGEHPGLSI 58359 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK Sbjct: 58360 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 58539 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 KKKEEEEDEEDEEDEEEE DEEDEDEE+D+ Sbjct: 58540 KKKEEEEDEEDEEDEEEE-DEEDEDEEDDE 58626 >U21933 Xenopus laevis high mobility group protein-1 (HMG-1) mRNA, complete Length = 1552 Plus Strand HSPs: Score = 979 (344.6 bits), Expect = 9.5e-98, P = 9.5e-98 Identities = 181/214 (84%), Positives = 199/214 (92%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYA+FVQTCREEHKKKHPDASVNF+EFSKKCSERWKTMS KEK KFE Sbjct: 60 GKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFE 236 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAKADK RYEREMK+YIPPKGETKK+FKDPNAPKRPPSAFFLFCS++RPKIKGEHPG + Sbjct: 237 DMAKADKVRYEREMKSYIPPKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST 416 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD+AKKLGEMWNNTA DDK PYE++AAKLKEKYEKD+AAYRAKGKP+ AKK K EK+ Sbjct: 417 IGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYRAKGKPEPAKKAPAKPEKA 596 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKK EEEDE+D DEEE+++EEDE+EEEDDDDE Sbjct: 597 KKK--EEEDEDD--DEEEDDEEEDEEEEEDDDDE 686 >Y00365 Chinese hamster HMG-1 gene for high mobility group protein 1 Length = 2058 Plus Strand HSPs: Score = 948 (333.7 bits), Expect = 1.4e-94, P = 1.4e-94 Identities = 178/180 (98%), Positives = 180/180 (100%), Frame = +1 Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP Sbjct: 1 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 180 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY Sbjct: 181 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 360 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 361 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 540 Score = 106 (37.3 bits), Expect = 0.026, P = 0.026 Identities = 25/84 (29%), Positives = 41/84 (48%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ S++ F R + K +HP S+ + +KK E W +A +K +E A Sbjct: 166 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKA 339 Query: 64 KADKARYEREMKTY-IPPKGETKKK 87 K +YE+++ Y K + KK Sbjct: 340 AKLKEKYEKDIAAYRAKGKPDAAKK 414 >X62534 H.sapiens HMG-2 mRNA Length = 1301 Plus Strand HSPs: Score = 924 (325.3 bits), Expect = 7.6e-92, P = 7.6e-92 Identities = 169/208 (81%), Positives = 188/208 (90%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 KKK E E++EE+EE+E+E+E+EEDEDEE Sbjct: 758 KKKNEPEDEEEEEEEEDEDEEEEDEDEE 841 Score = 913 (321.4 bits), Expect = 1.1e-90, P = 1.1e-90 Identities = 169/210 (80%), Positives = 188/210 (89%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KKK E E++EE+EE+E+E+E+EEDEDEE Sbjct: 758 KKKNEPEDEEEEEEEEDEDEEEEDEDEE-- 841 Score = 913 (321.4 bits), Expect = 1.1e-90, P = 1.1e-90 Identities = 172/214 (80%), Positives = 187/214 (87%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKK E E DEEEEE+EEDEDEEE+D+DE Sbjct: 758 KKKNEPE-------DEEEEEEEEDEDEEEEDEDE 838 Score = 910 (320.3 bits), Expect = 2.3e-90, P = 2.3e-90 Identities = 169/212 (79%), Positives = 188/212 (88%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 KKK E E DEE+EEEEEDE++E+E+ED++ Sbjct: 758 KKKNEPE----DEEEEEEEEDEDEEEEDEDEE 841 >J02895 Pig non-histone chromosomal protein (HMG2) mRNA, complete cds. Length = 1153 Plus Strand HSPs: Score = 923 (324.9 bits), Expect = 1.1e-91, P = 1.1e-91 Identities = 171/210 (81%), Positives = 189/210 (90%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 147 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 326 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 327 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 506 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 507 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKGEAGKKGPGRPTGS 686 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KKK E E DEE+EE+EEE+EDEE+EDE+E+ Sbjct: 687 KKKNEPE-DEEEEEEEEEDEDEEEEDEDEE 773 Score = 913 (321.4 bits), Expect = 1.3e-90, P = 1.3e-90 Identities = 171/212 (80%), Positives = 189/212 (89%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 147 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 326 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 327 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 506 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 507 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKGEAGKKGPGRPTGS 686 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 KKK E E DEE+EE+EEE+EDEE+EDE D++ Sbjct: 687 KKKNEPE-DEEEEEEEEEDEDEEEEDE--DEE 773 Score = 912 (321.0 bits), Expect = 1.6e-90, P = 1.6e-90 Identities = 171/214 (79%), Positives = 188/214 (87%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 147 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 326 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 327 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 506 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 507 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKGEAGKKGPGRPTGS 686 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKK E E++EE EEE+EEDEDEEE+D+DE Sbjct: 687 KKKNEPEDEEE------EEEEEEDEDEEEEDEDE 770 >D84418 Rat mRNA for chromosomal protein HMG2, complete cds. Length = 1072 Plus Strand HSPs: Score = 914 (321.7 bits), Expect = 1.1e-90, P = 1.1e-90 Identities = 168/210 (80%), Positives = 188/210 (89%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 78 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 257 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 258 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 437 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK + KKG + S Sbjct: 438 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKGPGRPTGS 617 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KKK E E DEE+EE+EE++EDEE+EDE+E+ Sbjct: 618 KKKNEPE-DEEEEEEEEDDEDEEEEDEDEE 704 Score = 910 (320.3 bits), Expect = 2.8e-90, P = 2.8e-90 Identities = 171/214 (79%), Positives = 188/214 (87%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 78 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 257 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS Sbjct: 258 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 437 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK + KKG + S Sbjct: 438 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKGPGRPTGS 617 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKK E E DEE+EEEEED+EDE EEED+D+E Sbjct: 618 KKKNEPE----DEEEEEEEEDDEDE-EEEDEDEE 704 >Z46757 M.musculus mRNA for high mobility group 2 protein. Length = 870 Plus Strand HSPs: Score = 914 (321.7 bits), Expect = 1.3e-90, P = 1.3e-90 Identities = 168/209 (80%), Positives = 188/209 (89%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS Sbjct: 280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 KKK E E++EE+EE+EEEE+DEE+E++EE Sbjct: 640 KKKNEPEDEEEEEEEEEEEDDEEEEEDEE 726 Score = 909 (320.0 bits), Expect = 4.4e-90, P = 4.4e-90 Identities = 169/210 (80%), Positives = 188/210 (89%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS Sbjct: 280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KKK E E DEE+EE+EEEEED+E+E+E+E+ Sbjct: 640 KKKNEPE-DEEEEEEEEEEEDDEEEEEDEE 726 Score = 906 (318.9 bits), Expect = 9.2e-90, P = 9.2e-90 Identities = 171/212 (80%), Positives = 188/212 (88%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS Sbjct: 280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 KKK E E DEE+EE+EEEEED DE+EEED++ Sbjct: 640 KKKNEPE-DEEEEEEEEEEED--DEEEEEDEE 726 Score = 904 (318.2 bits), Expect = 1.5e-89, P = 1.5e-89 Identities = 169/213 (79%), Positives = 188/213 (88%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS Sbjct: 280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 KKK E E DEE+EEEEE+EED++EEE+D++ Sbjct: 640 KKKNEPE----DEEEEEEEEEEEDDEEEEEDEE 726 Score = 902 (317.5 bits), Expect = 2.4e-89, P = 2.4e-89 Identities = 171/214 (79%), Positives = 188/214 (87%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE Sbjct: 100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS Sbjct: 280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG + S Sbjct: 460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKK E E DEE+EEEEE+EED DEEE++D+E Sbjct: 640 KKKNEPE----DEEEEEEEEEEED-DEEEEEDEE 726 >M83235 Gallus gallus non-histone chromosomal protein (HMG2) mRNA, complete Length = 1083 Plus Strand HSPs: Score = 910 (320.3 bits), Expect = 2.8e-90, P = 2.8e-90 Identities = 167/206 (81%), Positives = 184/206 (89%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDED 206 KKK E EE+EE+EEDEEEEE+EEDE+ Sbjct: 626 KKKAEPEEEEEEEEDEEEEEEEEDEE 703 Score = 902 (317.5 bits), Expect = 2.0e-89, P = 2.0e-89 Identities = 168/208 (80%), Positives = 184/208 (88%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 KKK E EE+EE+EEDEEEEE+EEDE E Sbjct: 626 KKKAEPEEEEEEEEDEEEEEEEEDE--E 703 Score = 891 (313.6 bits), Expect = 2.9e-88, P = 2.9e-88 Identities = 167/212 (78%), Positives = 184/212 (86%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 KKK E EE+EE+EEDEEEEE+EEDE+ Sbjct: 626 KKKAEPEEEEEEEEDEEEEEEEEDEE------ 703 Score = 883 (310.8 bits), Expect = 2.0e-87, P = 2.0e-87 Identities = 167/214 (78%), Positives = 183/214 (85%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKK E EE+EE+EEDEEEEE+EEDE Sbjct: 626 KKKAEPEEEEEEEEDEEEEEEEEDE--------- 700 Score = 111 (39.1 bits), Expect = 0.0051, P = 0.0051 Identities = 31/121 (25%), Positives = 54/121 (44%), Frame = +2 Query: 63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG 122 A+ +AR P E DPN P+ S++ F R + K +HP S+ Sbjct: 14 AQGARARVANAKPPQPGPAAELAMGKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVN 193 Query: 123 --DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + ++K E W ++ +K +E+ A K +Y++++ Y P KKG K + Sbjct: 194 FAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREMKNYVP---PKGEKKGKKKDPNA 364 Query: 181 KKK 183 K+ Sbjct: 365 PKR 373 >M80574 Gallus domesticus high-mobility group-2 protein (HMG-2) mRNA, Length = 995 Plus Strand HSPs: Score = 900 (316.8 bits), Expect = 3.5e-89, P = 3.5e-89 Identities = 165/206 (80%), Positives = 183/206 (88%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTC EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDED 206 KKK E EE+EE+EEDEEEEE+EEDE+ Sbjct: 643 KKKAEPEEEEEEEEDEEEEEEEEDEE 720 Score = 892 (314.0 bits), Expect = 2.4e-88, P = 2.4e-88 Identities = 166/208 (79%), Positives = 183/208 (87%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTC EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 KKK E EE+EE+EEDEEEEE+EEDE E Sbjct: 643 KKKAEPEEEEEEEEDEEEEEEEEDE--E 720 Score = 881 (310.1 bits), Expect = 3.6e-87, P = 3.6e-87 Identities = 165/212 (77%), Positives = 183/212 (86%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTC EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 KKK E EE+EE+EEDEEEEE+EEDE+ Sbjct: 643 KKKAEPEEEEEEEEDEEEEEEEEDEE------ 720 Score = 873 (307.3 bits), Expect = 2.5e-86, P = 2.5e-86 Identities = 165/214 (77%), Positives = 182/214 (85%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTC EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE Sbjct: 103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS Sbjct: 283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG + S Sbjct: 463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKK E EE+EE+EEDEEEEE+EEDE Sbjct: 643 KKKAEPEEEEEEEEDEEEEEEEEDE--------- 717 Score = 103 (36.3 bits), Expect = 0.042, P = 0.041 Identities = 30/121 (24%), Positives = 53/121 (43%), Frame = +1 Query: 63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG 122 A+ +AR P E DPN P+ S++ F + K +HP S+ Sbjct: 31 AQGARARVANAKPPQPGPAAELAMGKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVN 210 Query: 123 --DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + ++K E W ++ +K +E+ A K +Y++++ Y P KKG K + Sbjct: 211 FAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREMKNYVP---PKGEKKGKKKDPNA 381 Query: 181 KKK 183 K+ Sbjct: 382 PKR 390 >D30765 Xenopus laevis mRNA for HMG-X protein, complete cds. Length = 1081 Plus Strand HSPs: Score = 871 (306.6 bits), Expect = 3.8e-86, P = 3.8e-86 Identities = 162/211 (76%), Positives = 183/211 (86%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD SVNFS+FSKKCSERWK+MSAKEKGKFE Sbjct: 108 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 287 Query: 61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 D+AK DKARYEREMKTYIPPKGETK K+ KDPNAPKRPPSAFF+FCSE+RP+IK E PGL Sbjct: 288 DLAKGDKARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL 467 Query: 120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179 SIGD AKKLGE+W DK P+E+KAAKLKEKYEKD+AAYRAKGK D KK +A Sbjct: 468 SIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVGKKVPGRATG 647 Query: 180 SKKKKE-EEEDEEDEEDEEEEEDEEDEDEEE 209 SKKK E D+E++EDEE+EEDE+D+D++E Sbjct: 648 SKKKVEPHHHDDEEDEDEEDEEDEDDDDDDE 740 Score = 869 (305.9 bits), Expect = 6.2e-86, P = 6.2e-86 Identities = 162/212 (76%), Positives = 183/212 (86%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD SVNFS+FSKKCSERWK+MSAKEKGKFE Sbjct: 108 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 287 Query: 61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 D+AK DKARYEREMKTYIPPKGETK K+ KDPNAPKRPPSAFF+FCSE+RP+IK E PGL Sbjct: 288 DLAKGDKARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL 467 Query: 120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179 SIGD AKKLGE+W DK P+E+KAAKLKEKYEKD+AAYRAKGK D KK +A Sbjct: 468 SIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVGKKVPGRATG 647 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 SKKK E D+E++E+EEDEEDED+++DD+ Sbjct: 648 SKKKVEPHH--HDDEEDEDEEDEEDEDDDDDDE 740 Score = 869 (305.9 bits), Expect = 6.2e-86, P = 6.2e-86 Identities = 167/214 (78%), Positives = 183/214 (85%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD SVNFS+FSKKCSERWK+MSAKEKGKFE Sbjct: 108 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 287 Query: 61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 D+AK DKARYEREMKTYIPPKGETK K+ KDPNAPKRPPSAFF+FCSE+RP+IK E PGL Sbjct: 288 DLAKGDKARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL 467 Query: 120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179 SIGD AKKLGE+W DK P+E+KAAKLKEKYEKD+AAYRAKGK D KK +A Sbjct: 468 SIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVGKKVPGRATG 647 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 SKKK E +DEEDE+EE DEEDED+ DDDDE Sbjct: 648 SKKKVEPHH-HDDEEDEDEE-DEEDEDD--DDDDE 740 >U31513 Ambystoma mexicanum high mobility group protein-2 (HMG-2) mRNA, Length = 1048 Plus Strand HSPs: Score = 868 (305.6 bits), Expect = 8.1e-86, P = 8.1e-86 Identities = 165/215 (76%), Positives = 186/215 (86%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPDASVNF+EFSKKCSERWKTM+AKEKGKFE Sbjct: 22 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFE 201 Query: 61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 DMAK DK RY+REMK+Y+PPKGETK KK KDPNAPKR PSAFFLFCSE+R KIK + PGL Sbjct: 202 DMAKGDKVRYDREMKSYVPPKGETKGKKKKDPNAPKRLPSAFFLFCSEHRLKIKADCPGL 381 Query: 120 SIGDVAKKLGEMWNNTAADDKQP-YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-A 177 SIGD AKKLGE W+ DK P +E+KAAKLKEKYEKDIAAYRAKGK D KK + A Sbjct: 382 SIGDTAKKLGEKWSEQTPKDKIPSFEQKAAKLKEKYEKDIAAYRAKGKVDVGKKAPGRPA 561 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 +KKK E E+DE+DEEDEEE+E+E+DE++EEDD+ Sbjct: 562 VAAKKKVEPEDDEDDEEDEEEDEEEDDEEDEEDDE 666 Score = 862 (303.4 bits), Expect = 3.5e-85, P = 3.5e-85 Identities = 164/215 (76%), Positives = 185/215 (86%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KPRGKMSSYA+FVQTCREEHKKKHPDASVNF+EFSKKCSERWKTM+AKEKGKFE Sbjct: 22 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFE 201 Query: 61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 DMAK DK RY+REMK+Y+PPKGETK KK KDPNAPKR PSAFFLFCSE+R KIK + PGL Sbjct: 202 DMAKGDKVRYDREMKSYVPPKGETKGKKKKDPNAPKRLPSAFFLFCSEHRLKIKADCPGL 381 Query: 120 SIGDVAKKLGEMWNNTAADDKQP-YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178 SIGD AKKLGE W+ DK P +E+KAAKLKEKYEKDIAAYRAKGK D KK + Sbjct: 382 SIGDTAKKLGEKWSEQTPKDKIPSFEQKAAKLKEKYEKDIAAYRAKGKVDVGKKAPGRPA 561 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + KKK E ED+ED+E E+EEEDEE++DEE+++DDE Sbjct: 562 VAAKKKVEPEDDEDDE-EDEEEDEEEDDEEDEEDDE 666 >M83665 Human high mobility group 2 protein (HMG-2) gene, complete cds. Length = 4341 Plus Strand HSPs: Score = 265 (93.3 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82 Identities = 49/58 (84%), Positives = 53/58 (91%), Frame = +2 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 SAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+ +A DKQPYE+KAAKLKEKYEK Sbjct: 2324 SAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEK 2497 Score = 264 (92.9 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82 Identities = 46/55 (83%), Positives = 50/55 (90%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKE 55 GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWK ++ Sbjct: 1672 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKVRQERD 1836 Score = 220 (77.4 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82 Identities = 40/50 (80%), Positives = 45/50 (90%), Frame = +1 Query: 49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98 +TMSAKEK KFEDMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPP Sbjct: 2101 QTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPP 2250 Score = 179 (63.0 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82 Identities = 34/53 (64%), Positives = 44/53 (83%), Frame = +2 Query: 156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 +DIAAYRAKGK +A KKG + SKKK E E++EE+EE+E+E+E+EEDEDEE Sbjct: 3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE 3235 Score = 168 (59.1 bits), Expect = 3.2e-81, Sum P(4) = 3.2e-81 Identities = 34/55 (61%), Positives = 44/55 (80%), Frame = +2 Query: 156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +DIAAYRAKGK +A KKG + SKKK E E++EE+EE+E+E+E+EEDEDEE Sbjct: 3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE-- 3235 Score = 168 (59.1 bits), Expect = 3.2e-81, Sum P(4) = 3.2e-81 Identities = 37/59 (62%), Positives = 43/59 (72%), Frame = +2 Query: 156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +DIAAYRAKGK +A KKG + SKKK E E DEEEEE+EEDEDEEE+D+DE Sbjct: 3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE-------DEEEEEEEEDEDEEEEDEDE 3232 Score = 165 (58.1 bits), Expect = 6.5e-81, Sum P(4) = 6.5e-81 Identities = 34/57 (59%), Positives = 44/57 (77%), Frame = +2 Query: 156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 +DIAAYRAKGK +A KKG + SKKK E E DEE+EEEEEDE++E+E+ED++ Sbjct: 3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE----DEEEEEEEEDEDEEEEDEDEE 3235 Score = 90 (31.7 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18 Identities = 20/60 (33%), Positives = 31/60 (51%), Frame = +2 Query: 13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72 S++ F R + K +HP S+ + +KK E W SAK+K +E A K +YE+ Sbjct: 2324 SAFFLFCSEHRPKIKSEHPGLSIG--DTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEK 2497 Score = 70 (24.6 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16 Identities = 15/45 (33%), Positives = 23/45 (51%), Frame = +1 Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132 DPN P+ S++ F R + K +HP S+ + +KK E W Sbjct: 1681 DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERW 1815 >X98857 L.fluviatilis mRNA for HMG protein Length = 1650 Plus Strand HSPs: Score = 821 (289.0 bits), Expect = 4.9e-81, P = 4.9e-81 Identities = 147/214 (68%), Positives = 186/214 (86%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKP+GKMSSYA+FVQTCREEHKKK+P+ASVNF+EFSKKCSERWKTMS KEK +FE Sbjct: 76 GKGDPKKPKGKMSSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFE 255 Query: 61 DMAKADKARYEREMKTYIPPKGET-KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 DMAK DK RY+REMKTY+PPKGE +K KDPNAPKRPPSAFF++C+EYR K++ E+PGL Sbjct: 256 DMAKVDKVRYDREMKTYVPPKGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGL 435 Query: 120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179 +IG +AKKLGEMWNN AD+K YE+K AKLKEKY+KD+A+YR+KGK + +K V ++ Sbjct: 436 TIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDMASYRSKGKVETSK---VASKP 606 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + K++++++DE+D+E ED+EDEDE++DDDDE Sbjct: 607 ASKQRDDDDDEDDDE-----EDDEDEDEDDDDDDE 696 >X02666 Trout mRNA for high mobility group protein HMG-T Length = 716 Plus Strand HSPs: Score = 824 (290.1 bits), Expect = 5.5e-81, P = 5.5e-81 Identities = 148/208 (71%), Positives = 183/208 (87%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GK DP+KPRGKMSSYA+FVQT REEHKKKHP+ASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 4 GK-DPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE 180 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK DK RYEREM++YIPPKGE KK+FKDPNAPKRP SAFF+FC+++RP++KGE PGLS Sbjct: 181 DLAKLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS 360 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGE WNN A+DK PYEKKA++LKEKYEKDI AYR KGK + + A+ + Sbjct: 361 IGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVPVS----MPAKAA 528 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 K++++D++D++D+E+++D++DED+E Sbjct: 529 APAKDDDDDDDDDDDDEDDDDDDDEDDE 612 Score = 811 (285.5 bits), Expect = 1.3e-79, P = 1.3e-79 Identities = 150/214 (70%), Positives = 181/214 (84%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GK DP+KPRGKMSSYA+FVQT REEHKKKHP+ASVNFSEFSKKCSERWKTMSAKEKGKFE Sbjct: 4 GK-DPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE 180 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK DK RYEREM++YIPPKGE KK+FKDPNAPKRP SAFF+FC+++RP++KGE PGLS Sbjct: 181 DLAKLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS 360 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGDVAKKLGE WNN A+DK PYEKKA++LKEKYEKDI AYR KGK + KA Sbjct: 361 IGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVPVSMPA--KAAAP 534 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +D++D+++++D+ED+D+++D+DDE Sbjct: 535 AK--------DDDDDDDDDDDDEDDDDDDDEDDE 612 >X63463 G.gallus HMG2a mRNA Length = 1073 Plus Strand HSPs: Score = 814 (286.5 bits), Expect = 4.2e-80, P = 4.2e-80 Identities = 155/206 (75%), Positives = 177/206 (85%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 67 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 246 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPSAFFLFCSE+RPKIK +PG+SI Sbjct: 247 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISI 420 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN + +KQPY KAAKLKEKYEKD+A Y++KGK D AK G A K+ Sbjct: 421 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 591 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDE 207 +KK EEEDEE+EEDEEEE DE+D+DE Sbjct: 592 RKKVEEEDEEEEEDEEEE-DEDDDDE 666 Score = 804 (283.0 bits), Expect = 4.8e-79, P = 4.8e-79 Identities = 156/213 (73%), Positives = 177/213 (83%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 67 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 246 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPSAFFLFCSE+RPKIK +PG+SI Sbjct: 247 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISI 420 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN + +KQPY KAAKLKEKYEKD+A Y++KGK D AK G A K+ Sbjct: 421 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 591 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK EEEDEE+EEDEEEE+ EDDDDE Sbjct: 592 RKKVEEEDEEEEEDEEEED--------EDDDDE 666 >X67668 M.musculus mRNA for high mobility group 2 protein Length = 847 Plus Strand HSPs: Score = 810 (285.1 bits), Expect = 1.4e-79, P = 1.4e-79 Identities = 154/204 (75%), Positives = 172/204 (84%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KP GKMSSYAFFVQTCREEHKKKHP++SVNF+E SKKCS+RWKTMSAKE KFE Sbjct: 139 GKGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFE 318 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKA Y REMK Y+ PKG+ K K KDPNAPKRPPSAF LFCSE RPKIK E+PGLS Sbjct: 319 DLAKSDKACYYREMKNYVSPKGDKKGKKKDPNAPKRPPSAFCLFCSENRPKIKIEYPGLS 498 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A +KQPYE+KAAKLKEKYEKD AAYR KGK +A KKG + S Sbjct: 499 IGDTAKKLGEMWSEQSAKEKQPYEQKAAKLKEKYEKDFAAYRVKGKSEAGKKGPGRPAGS 678 Query: 181 KKKKEEEEDEEDEEDEE-EEEDEE 203 KK E+E+EE+EEDEE EEEDEE Sbjct: 679 KKNDSEDEEEEEEEDEEGEEEDEE 750 Score = 796 (280.2 bits), Expect = 4.3e-78, P = 4.3e-78 Identities = 153/212 (72%), Positives = 173/212 (81%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDP KP GKMSSYAFFVQTCREEHKKKHP++SVNF+E SKKCS+RWKTMSAKE KFE Sbjct: 139 GKGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFE 318 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 D+AK+DKA Y REMK Y+ PKG+ K K KDPNAPKRPPSAF LFCSE RPKIK E+PGLS Sbjct: 319 DLAKSDKACYYREMKNYVSPKGDKKGKKKDPNAPKRPPSAFCLFCSENRPKIKIEYPGLS 498 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 IGD AKKLGEMW+ +A +KQPYE+KAAKLKEKYEKD AAYR KGK +A KKG + S Sbjct: 499 IGDTAKKLGEMWSEQSAKEKQPYEQKAAKLKEKYEKDFAAYRVKGKSEAGKKGPGRPAGS 678 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 KK D EDEEEEE+E++E EEED++ Sbjct: 679 KKN--------DSEDEEEEEEEDEEGEEEDEE 750 >AF022465 Mus musculus high mobility group protein homolog HMG4 (Hmg4) mRNA, Length = 1502 Plus Strand HSPs: Score = 801 (282.0 bits), Expect = 7.1e-79, P = 7.1e-79 Identities = 149/201 (74%), Positives = 173/201 (86%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 34 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDE 213 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 214 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 387 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN + ++KQPY KAAKLKEKYEKD+A Y++KGK D AK G K + K Sbjct: 388 GDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVARKK 564 Query: 182 KKKEEEEDEEDEEDEEEEEDE 202 ++EEEE+EE+EE+EEEEEDE Sbjct: 565 VEEEEEEEEEEEEEEEEEEDE 627 Score = 798 (280.9 bits), Expect = 1.5e-78, P = 1.5e-78 Identities = 151/204 (74%), Positives = 174/204 (85%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 34 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDE 213 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 214 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 387 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN + ++KQPY KAAKLKEKYEKD+A Y++KGK D AK G K + Sbjct: 388 GDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVAR-- 558 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDE 205 KK EEE+EE+EE+EEEEE+EEDE Sbjct: 559 -KKVEEEEEEEEEEEEEEEEEEDE 627 Score = 775 (272.8 bits), Expect = 4.1e-76, P = 4.1e-76 Identities = 151/213 (70%), Positives = 175/213 (82%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 34 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDE 213 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 214 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 387 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN + ++KQPY KAAKLKEKYEKD+A Y++KGK D AK G K ++ Sbjct: 388 GDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKV--AR 558 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KK EEEE+EE+EE+EEEEE+E DE Sbjct: 559 KKVEEEEEEEEEEEEEEEEEE----------DE 627 >Z17240 Homo sapiens for mRNA encoding HMG2B. Length = 1066 Plus Strand HSPs: Score = 800 (281.6 bits), Expect = 1.3e-78, P = 1.3e-78 Identities = 147/186 (79%), Positives = 166/186 (89%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82 REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+ +A DKQP Sbjct: 181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 YE+KAAKLKEKYEKDIAAY AKGK +A KKG + SKKK E E++EE+EE+E+E+E+E Sbjct: 361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEE 540 Query: 203 EDEDEE 208 EDEDEE Sbjct: 541 EDEDEE 558 Score = 789 (277.7 bits), Expect = 1.9e-77, P = 1.9e-77 Identities = 147/188 (78%), Positives = 166/188 (88%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82 REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+ +A DKQP Sbjct: 181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 YE+KAAKLKEKYEKDIAAY AKGK +A KKG + SKKK E E++EE+EE+E+E+E+E Sbjct: 361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEE 540 Query: 203 EDEDEEED 210 EDEDEE Sbjct: 541 EDEDEE-- 558 Score = 789 (277.7 bits), Expect = 1.9e-77, P = 1.9e-77 Identities = 150/192 (78%), Positives = 165/192 (85%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82 REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+ +A DKQP Sbjct: 181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 YE+KAAKLKEKYEKDIAAY AKGK +A KKG + SKKK E E DEEEEE+E Sbjct: 361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPE-------DEEEEEEE 519 Query: 203 EDEDEEEDDDDE 214 EDEDEEE+D+DE Sbjct: 520 EDEDEEEEDEDE 555 Score = 786 (276.7 bits), Expect = 3.9e-77, P = 3.9e-77 Identities = 147/190 (77%), Positives = 166/190 (87%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82 REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+ +A DKQP Sbjct: 181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 YE+KAAKLKEKYEKDIAAY AKGK +A KKG + SKKK E E DEE+EEEEEDE Sbjct: 361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPE----DEEEEEEEEDE 528 Query: 203 EDEDEEEDDD 212 ++E+E+ED++ Sbjct: 529 DEEEEDEDEE 558 Score = 131 (46.1 bits), Expect = 1.9e-05, P = 1.9e-05 Identities = 30/93 (32%), Positives = 47/93 (50%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ S++ F R + K +HP S+ + +KK E W SAK+K +E Sbjct: 196 KKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIG--DTAKKLGEMWSEQSAKDKQPYEQ 369 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94 A K +YE+++ Y KG+++ K P P Sbjct: 370 KAAKLKEKYEKDIAAY-GAKGKSEAGKKGPGRP 465 >D14314 Chicken mRNA for HMG-1, complete cds. Length = 740 Plus Strand HSPs: Score = 796 (280.2 bits), Expect = 4.9e-78, P = 4.9e-78 Identities = 153/206 (74%), Positives = 175/206 (84%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKK +P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 27 KGDPKKPKGKMSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 203 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 204 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 377 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN + +KQPY KAAKLKEKYEKD+A Y++KGK D AK G A K+ Sbjct: 378 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 548 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDE 207 +KK EEEDEE+EEDEEEE DE+D+DE Sbjct: 549 RKKVEEEDEEEEEDEEEE-DEDDDDE 623 Score = 786 (276.7 bits), Expect = 5.6e-77, P = 5.6e-77 Identities = 154/213 (72%), Positives = 175/213 (82%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GKMS+YAFFVQTCREEHKK +P+ VNF+EFSKKCSERWKTMS+KEK KF++ Sbjct: 27 KGDPKKPKGKMSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 203 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 204 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 377 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN + +KQPY KAAKLKEKYEKD+A Y++KGK D AK G A K+ Sbjct: 378 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 548 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK EEEDEE+EEDEEEE+ EDDDDE Sbjct: 549 RKKVEEEDEEEEEDEEEED--------EDDDDE 623 >Y10043 Homo sapiens mRNA for high mobility group protein HMG2a Length = 1633 Plus Strand HSPs: Score = 784 (276.0 bits), Expect = 4.1e-77, P = 4.1e-77 Identities = 150/204 (73%), Positives = 169/204 (82%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GK S+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKT+S KEK KF++ Sbjct: 93 KGDPKKPKGKTSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDE 272 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 273 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 446 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN +KQPY KAAKLKEKYEKD+A Y++KGK D AK G K + Sbjct: 447 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVAR-- 617 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDE 205 KK EEEDEE EE+EEEEE+EEDE Sbjct: 618 -KKVEEEDEEQEEEEEEEEEEEDE 686 Score = 759 (267.2 bits), Expect = 1.8e-74, P = 1.8e-74 Identities = 150/213 (70%), Positives = 169/213 (79%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGDPKKP+GK S+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWKT+S KEK KF++ Sbjct: 93 KGDPKKPKGKTSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDE 272 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 MAKADK RY+REMK Y P KG KKK DPNAPKRPPS FFLFCSE+RPKIK +PG+SI Sbjct: 273 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 446 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 GDVAKKLGEMWNN +KQPY KAAKLKEKYEKD+A Y++KGK D AK G K + Sbjct: 447 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVAR-- 617 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KK EEEDEE EE+EEEEE+EEDE Sbjct: 618 -KKVEEEDEEQEEEEEEEEEEEDE--------- 686 >L32859 Rainbow trout HMG-1 gene exons 2-5, complete cds. Length = 3882 Plus Strand HSPs: Score = 257 (90.5 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75 Identities = 47/69 (68%), Positives = 56/69 (81%), Frame = +3 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 F P + SAFF+FC+++RP++KGE PGLSIGDVAKKLGE WNN A+DK PYEKKA Sbjct: 2268 FLPPTSLPSSRSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKA 2447 Query: 148 AKLKEKYEK 156 +KLKEKYEK Sbjct: 2448 SKLKEKYEK 2474 Score = 248 (87.3 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75 Identities = 45/49 (91%), Positives = 48/49 (97%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49 GK DP+KPRGKMSSYA+FVQTCREEHKKKHP+ASVNFSEFSKKCSERWK Sbjct: 1280 GK-DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWK 1423 Score = 238 (83.8 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75 Identities = 44/57 (77%), Positives = 48/57 (84%), Frame = +2 Query: 41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRP 97 S C KTMSAKEKGKFED+AK DK RYEREM++YIPPKGE KK+FKDPNAPKRP Sbjct: 1820 SSCCCSSLKTMSAKEKGKFEDLAKLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRP 1990 Score = 119 (41.9 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75 Identities = 20/55 (36%), Positives = 40/55 (72%), Frame = +1 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 Y +DI AYR KGK + + A+ + K++++D++D++D+E+++D++DED+E Sbjct: 2968 YSQDITAYRNKGKVPVS----MPAKAAAPAKDDDDDDDDDDDDEDDDDDDDEDDE 3120 Score = 106 (37.3 bits), Expect = 2.6e-74, Sum P(4) = 2.6e-74 Identities = 22/61 (36%), Positives = 38/61 (62%), Frame = +1 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 Y +DI AYR KGK + KA K +D++D+++++D+ED+D+++D+DD Sbjct: 2968 YSQDITAYRNKGKVPVSMPA--KAAAPAK--------DDDDDDDDDDDDEDDDDDDDEDD 3117 Query: 214 E 214 E Sbjct: 3118 E 3120 Score = 79 (27.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07 Identities = 18/63 (28%), Positives = 33/63 (52%), Frame = +3 Query: 13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72 S++ F R + K + P S+ + +KK E+W ++A++K +E A K +YE+ Sbjct: 2301 SAFFIFCADFRPQVKGETPGLSIG--DVAKKLGEKWNNLTAEDKVPYEKKASKLKEKYEK 2474 Query: 73 EMK 75 K Sbjct: 2475 VNK 2483 Score = 68 (23.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06 Identities = 15/46 (32%), Positives = 23/46 (50%), Frame = +2 Query: 89 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132 KDP P+ S++ F R + K +HP S+ + +KK E W Sbjct: 1283 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERW 1420 Score = 40 (14.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20 Identities = 13/48 (27%), Positives = 23/48 (47%), Frame = +2 Query: 136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 +A +K +E A K +YE+++ +Y P KK K + K+ Sbjct: 1853 SAKEKGKFEDLAKLDKVRYEREMRSYIP---PKGEKKKRFKDPNAPKR 1987 >AF009343 Mus musculus HMG-like protein (Trf) mRNA, complete cds. Length = 1328 Plus Strand HSPs: Score = 699 (246.1 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71 Identities = 135/161 (83%), Positives = 144/161 (89%), Frame = +1 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 K++G + + + E + K PPK ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK Sbjct: 298 KKRGNLKIWQRLTRLVMEEK*KPTPPPK-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 474 Query: 114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173 GEHP LSIGD+AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG Sbjct: 475 GEHPRLSIGDLAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 654 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 VVKAEKSKKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE Sbjct: 655 VVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 777 Score = 387 (136.2 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38 Identities = 72/80 (90%), Positives = 75/80 (93%), Frame = +3 Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 + R KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD Sbjct: 156 RSRDKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 335 Query: 67 KARYEREMKTYIPPKGETKK 86 KARY REMKTY PPKG+ K+ Sbjct: 336 KARYGREMKTYTPPKGDQKE 395 Score = 106 (37.3 bits), Expect = 0.00057, Sum P(2) = 0.00057 Identities = 25/84 (29%), Positives = 41/84 (48%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ S++ F R + K +HP S+ + +KK E W +A +K +E A Sbjct: 403 DPNAPKRPPSAFFLFCSEYRPKIKGEHPRLSIG--DLAKKLGEMWNNTAADDKQPYEKKA 576 Query: 64 KADKARYEREMKTY-IPPKGETKKK 87 K +YE+++ Y K + KK Sbjct: 577 AKLKEKYEKDIAAYRAKGKPDAAKK 651 Score = 82 (28.9 bits), Expect = 0.38, Sum P(2) = 0.32 Identities = 18/65 (27%), Positives = 32/65 (49%), Frame = +3 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 S++ F R + K +HP S+ + +KK E W +A +K +E A K +Y + Sbjct: 174 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYGR 353 Query: 157 DIAAY 161 ++ Y Sbjct: 354 EMKTY 368 Score = 52 (18.3 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71 Identities = 9/9 (100%), Positives = 9/9 (100%), Frame = +2 Query: 1 GKGDPKKPR 9 GKGDPKKPR Sbjct: 140 GKGDPKKPR 166 >D14718 Human chromosomal protein HMG1 related gene. Length = 2140 Plus Strand HSPs: Score = 666 (234.4 bits), Expect = 1.0e-64, P = 1.0e-64 Identities = 127/148 (85%), Positives = 134/148 (90%), Frame = +3 Query: 64 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 123 K DKA YERE+KT IPPKGETKKKFKDPNAPKRPPSAFFLFCSEY PKIKGE GL I D Sbjct: 1110 KGDKAHYEREVKT*IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEQLGLPISD 1289 Query: 124 VAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 V KKLGEMWNNTAA+DKQP EKKAAKLKEKY+KDIAAY AKGKPDAAKKG +KAEKSKKK Sbjct: 1290 VVKKLGEMWNNTAAEDKQPCEKKAAKLKEKYKKDIAAY*AKGKPDAAKKGFIKAEKSKKK 1469 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 KEEEEDEEDEED +EE DEEDEDEE+D+ Sbjct: 1470 KEEEEDEEDEEDYDEEVDEEDEDEEDDE 1553 Score = 346 (121.8 bits), Expect = 6.0e-30, P = 6.0e-30 Identities = 81/188 (43%), Positives = 108/188 (57%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGD KKPRGKMSSYAFFVQTCREEHKK+HPDASVNFSEFSKK SERWKTMSAKEKG+FE Sbjct: 922 GKGDSKKPRGKMSSYAFFVQTCREEHKKQHPDASVNFSEFSKKGSERWKTMSAKEKGQFE 1101 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DMAK + + + K PKG K+ + P P+ F K+K + Sbjct: 1102 DMAKVTRPIMKEK*KPKSLPKGRQKRSSRIPMHPRGLLQPFSCSALSITQKLKENNLACP 1281 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKKGVVKAEK 179 + ++ + E T K+ + K K I + KG K+ + + +K Sbjct: 1282 LV-MS*RNWERCGITLLQKTSSLVKRRLQS*RKNTKRILLHIELKGSLMQQKRDLSRLKK 1458 Query: 180 SKKKKEEEE 188 ++K+++ + Sbjct: 1459 ARKRRKRRK 1485 Score = 90 (31.7 bits), Expect = 1.8, P = 0.83 Identities = 25/84 (29%), Positives = 39/84 (46%), Frame = +3 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKK-KHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 DP P+ S++ F C E H K K + S+ KK E W +A++K E Sbjct: 1188 DPNAPKRPPSAFFLF---CSEYHPKIKGEQLGLPISDVVKKLGEMWNNTAAEDKQPCEKK 1358 Query: 63 AKADKARYEREMKTY-IPPKGETKKK 87 A K +Y++++ Y K + KK Sbjct: 1359 AAKLKEKYKKDIAAY*AKGKPDAAKK 1436 >U13881 Drosophila melanogaster DNA-binding protein (DSP1) mRNA, complete Length = 1900 Plus Strand HSPs: Score = 540 (190.1 bits), Expect = 2.6e-51, P = 2.6e-51 Identities = 100/218 (45%), Positives = 148/218 (67%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM KEK +F + Sbjct: 700 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 876 Query: 62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115 MA+ DK RYE EM+ Y+PPKG + +K+ KDPNAPKR SAFF FC++ R K+K Sbjct: 877 MAEKDKQRYEAEMQNYVPPKGALWDRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1056 Query: 116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175 +P +GD+AK+LG W++ + KQ YE A + K +YE+++ Y+ GK + + Sbjct: 1057 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1236 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + +++ +K ++ ++ E++ D+D+ + DDDE Sbjct: 1237 ASMQAQAQKAALLAARAQQQHQQLEEQHDDDDGDGDDDE 1353 Score = 529 (186.2 bits), Expect = 3.7e-50, P = 3.7e-50 Identities = 100/220 (45%), Positives = 148/220 (67%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM KEK +F + Sbjct: 700 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 876 Query: 62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115 MA+ DK RYE EM+ Y+PPKG + +K+ KDPNAPKR SAFF FC++ R K+K Sbjct: 877 MAEKDKQRYEAEMQNYVPPKGALWDRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1056 Query: 116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175 +P +GD+AK+LG W++ + KQ YE A + K +YE+++ Y+ GK + + Sbjct: 1057 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1236 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE-- 214 + +++ +K ++ ++ E++ D+D+ + DDDE Sbjct: 1237 ASMQAQAQKAALLAARAQQQHQQLEEQHDDDDGDGDDDENQ 1359 >X81456 D.melanogaster mRNA for an open reading frame Length = 2852 Plus Strand HSPs: Score = 539 (189.7 bits), Expect = 1.4e-50, P = 1.4e-50 Identities = 100/218 (45%), Positives = 148/218 (67%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM KEK +F + Sbjct: 1238 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 1414 Query: 62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115 MA+ DK RYE EM+ Y+PPKG + +K+ KDPNAPKR SAFF FC++ R K+K Sbjct: 1415 MAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1594 Query: 116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175 +P +GD+AK+LG W++ + KQ YE A + K +YE+++ Y+ GK + + Sbjct: 1595 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1774 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + +++ +K ++ ++ E++ D+D+ + DDDE Sbjct: 1775 ASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDE 1891 Score = 528 (185.9 bits), Expect = 2.2e-49, P = 2.2e-49 Identities = 100/220 (45%), Positives = 148/220 (67%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM KEK +F + Sbjct: 1238 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 1414 Query: 62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115 MA+ DK RYE EM+ Y+PPKG + +K+ KDPNAPKR SAFF FC++ R K+K Sbjct: 1415 MAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1594 Query: 116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175 +P +GD+AK+LG W++ + KQ YE A + K +YE+++ Y+ GK + + Sbjct: 1595 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1774 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE-- 214 + +++ +K ++ ++ E++ D+D+ + DDDE Sbjct: 1775 ASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDENQ 1897 >L32954 Rainbow trout HMG-T2 gene exons 1-4, complete cds. Length = 1368 Plus Strand HSPs: Score = 227 (79.9 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50 Identities = 42/52 (80%), Positives = 44/52 (84%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 52 GK DP KP+GK SSYAFFV TCREEHKKKHP SVNFSEFSKKCSERW+ S Sbjct: 36 GK-DPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRVSS 188 Score = 210 (73.9 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50 Identities = 49/107 (45%), Positives = 65/107 (60%), Frame = +3 Query: 66 DKARYEREMKTYIPPKGETKKK-----------FKDPN---APKRPP--SAFFLFCSEYR 109 D + ERE +T +PPKG K F+ N + P SAFF+FC+E+R Sbjct: 450 DLRQQERERRTPMPPKGHRKYSTYTTIDFCSVLFRFWN*MCSQHSIPNSSAFFVFCAEHR 629 Query: 110 PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 +IK ++PG+ IGD+AK+LG +W DKQP+E KAAKLKEKYEK Sbjct: 630 GRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEK 770 Score = 192 (67.6 bits), Expect = 2.3e-48, Sum P(3) = 2.3e-48 Identities = 37/59 (62%), Positives = 45/59 (76%), Frame = +2 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPPSAFFLF 104 ++TMSAKEK KFEDMAK DK RY+++MK Y+PPKG K+ KDPNAPKRPP L+ Sbjct: 347 FQTMSAKEKVKFEDMAKGDKVRYDKDMKGYVPPKGSKAAGKRKKDPNAPKRPP*VLHLY 523 Score = 141 (49.6 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50 Identities = 26/56 (46%), Positives = 41/56 (73%), Frame = +3 Query: 157 DIAAYRAKGKPDA-AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 D+AAY+AKG A AK G + KK ++D++D++DEEE++DEE++D+E+DD Sbjct: 849 DVAAYKAKGGAGATAKSGPGRPAVGKKAAPMDDDDDDDDDEEEDDDEEEDDDEDDD 1016 Score = 139 (48.9 bits), Expect = 4.9e-50, Sum P(3) = 4.9e-50 Identities = 28/56 (50%), Positives = 41/56 (73%), Frame = +3 Query: 157 DIAAYRAKGKPDA-AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 D+AAY+AKG A AK G + KK ++D++D++DEEE++DEE ED++EDDD Sbjct: 849 DVAAYKAKGGAGATAKSGPGRPAVGKKAAPMDDDDDDDDDEEEDDDEE-EDDDEDDD 1016 Score = 124 (43.7 bits), Expect = 1.8e-48, Sum P(3) = 1.8e-48 Identities = 27/58 (46%), Positives = 39/58 (67%), Frame = +3 Query: 157 DIAAYRAKGKPDA-AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D+AAY+AKG A AK G + KK ++D++D++DEEE D+DEEEDDD++ Sbjct: 849 DVAAYKAKGGAGATAKSGPGRPAVGKKAAPMDDDDDDDDDEEE-----DDDEEEDDDED 1010 Score = 88 (31.0 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12 Identities = 18/46 (39%), Positives = 26/46 (56%), Frame = +3 Query: 89 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132 KDPN PK S++ F + R + K +HPG S+ + +KK E W Sbjct: 39 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERW 176 Score = 60 (21.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09 Identities = 16/64 (25%), Positives = 27/64 (42%), Frame = +3 Query: 13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72 +S AFFV + K + + + +K+ W + K+K E A K +YE+ Sbjct: 591 NSSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEK 770 Query: 73 EMKT 76 T Sbjct: 771 VRST 782 Score = 52 (18.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20 Identities = 13/43 (30%), Positives = 22/43 (51%), Frame = +2 Query: 131 MWNNTAADDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKK 172 ++ +A +K +E A K +Y+KD+ Y KG A K+ Sbjct: 344 LFQTMSAKEKVKFEDMAKGDKVRYDKDMKGYVPPKGSKAAGKR 472 >AF003626 Homo sapiens cosmids IM0525, LC1233, Qc3C1, LB1439, Qc12C11 and Length = 86,769 Plus Strand HSPs: Score = 245 (86.2 bits), Expect = 1.2e-49, Sum P(3) = 1.2e-49 Identities = 46/60 (76%), Positives = 50/60 (83%), Frame = +1 Query: 97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 P S FFLFCSE+RPKIK +PG+SIGDVAKKLGEMWNN +KQPY KAAKLKEKYEK Sbjct: 68284 PRSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEK 68463 Score = 238 (83.8 bits), Expect = 1.2e-49, Sum P(3) = 1.2e-49 Identities = 41/48 (85%), Positives = 46/48 (95%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49 KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+ VNF+EFSKKCSERWK Sbjct: 66767 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWK 66910 Score = 190 (66.9 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44 Identities = 39/59 (66%), Positives = 45/59 (76%), Frame = +3 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98 F++ CS +TMS KEK KF++MAKADK RY+REMK Y P KG KKK DPNAPKRPP Sbjct: 67188 FNESCS--LQTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPP 67352 Score = 137 (48.2 bits), Expect = 1.2e-49, Sum P(3) = 1.2e-49 Identities = 30/49 (61%), Positives = 37/49 (75%), Frame = +1 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 D+A Y++KGK D AK G K + KK EEEDEE+EE+EEEEE+EEDE Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE 69072 Score = 116 (40.8 bits), Expect = 1.8e-47, Sum P(3) = 1.8e-47 Identities = 30/56 (53%), Positives = 37/56 (66%), Frame = +1 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 D+A Y++KGK D AK G K + KK EEEDEE+EE+EEEEE+EEDE Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE------- 69072 Score = 114 (40.1 bits), Expect = 2.9e-47, Sum P(3) = 2.9e-47 Identities = 30/57 (52%), Positives = 37/57 (64%), Frame = +1 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 D+A Y++KGK D AK G K + KK EEEDEE+EE+EEEEE+EEDE Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE-------- 69072 Score = 112 (39.4 bits), Expect = 4.7e-47, Sum P(3) = 4.7e-47 Identities = 30/58 (51%), Positives = 37/58 (63%), Frame = +1 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D+A Y++KGK D AK G K + KK EEEDEE+EE+EEEEE+EEDE Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE--------- 69072 Score = 65 (22.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07 Identities = 16/60 (26%), Positives = 27/60 (45%), Frame = +1 Query: 13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72 S + F R + K +P S+ + +KK E W ++ EK + A K +YE+ Sbjct: 68290 SGFFLFCSEFRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEK 68463 Score = 60 (21.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06 Identities = 14/45 (31%), Positives = 22/45 (48%), Frame = +2 Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132 DP PK SA+ F R + K ++P + + + +KK E W Sbjct: 66773 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERW 66907 Score = 46 (16.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05 Identities = 9/31 (29%), Positives = 14/31 (45%), Frame = +2 Query: 112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 I G HPGL + L W+++ + P Sbjct: 39650 ILGTHPGLPLSGCNTSLSATWSSSRDEASGP 39742 Score = 44 (15.5 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29 Identities = 15/41 (36%), Positives = 19/41 (46%), Frame = +2 Query: 49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFK 89 +T S K K K D K K ERE K + E K++ K Sbjct: 58361 ETPSQKRK-KERDREKERKKERERERKRETERRKERKRERK 58480 Score = 41 (14.4 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29 Identities = 8/23 (34%), Positives = 13/23 (56%), Frame = +2 Query: 77 YIPPKGETKKKFKDPNAPKRPPS 99 Y+P + E + + K P+ P PS Sbjct: 35276 YLPCQMEEEARIKSPSPPALLPS 35344 Score = 40 (14.1 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18 Identities = 13/35 (37%), Positives = 17/35 (48%), Frame = +3 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KEK + D A K + D K A+ KKKK+ Sbjct: 67224 KEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKD 67328 >M26110 Bovine high-mobility-group protein (HMG-1) mRNA, 3' end. Length = 791 Plus Strand HSPs: Score = 495 (174.2 bits), Expect = 3.6e-46, P = 3.6e-46 Identities = 95/97 (97%), Positives = 97/97 (100%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 G+SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA Sbjct: 10 GVSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 189 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EKSKKKKEEEEDEEDEEDEEEEEDEEDE+EEEDDDDE Sbjct: 190 EKSKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE 300 >L06453 Strongylocentrotus purpuratus (clone C) high mobility group 1 Length = 1755 Plus Strand HSPs: Score = 483 (170.0 bits), Expect = 3.0e-45, P = 3.0e-45 Identities = 95/194 (48%), Positives = 123/194 (63%), Frame = +2 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 D KPRG+MS+YA+FVQ R EH K HP++ V F+EFSK CS RWK + K KG F + + Sbjct: 119 DSSKPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFHEKS 298 Query: 64 KADKARYEREMKTYIPPKGETKKKF---KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 DK RY+REM++Y PPKGE K+ KDP+APKR SAFF+F E R IK HP S Sbjct: 299 MRDKVRYDREMQSYKPPKGEKNKRRRRRKDPDAPKRNLSAFFIFSGENRAAIKSVHPNWS 478 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 +GD+AK+L W A +K P++K AAK KE+Y K +A Y+AK KP K VK S Sbjct: 479 VGDIAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYKAKAKP---MKRQVKESSS 649 Query: 181 KKKKEEEEDEEDEEDEE 197 + D+ +D + Sbjct: 650 SSSSDSSSDDSSSDDSD 700 >X89811 D.melanogaster DNA for SSRP2 gene Length = 5713 Plus Strand HSPs: Score = 201 (70.8 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42 Identities = 35/48 (72%), Positives = 43/48 (89%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49 K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWK Sbjct: 3649 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWK 3789 Score = 144 (50.7 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42 Identities = 29/53 (54%), Positives = 37/53 (69%), Frame = +2 Query: 50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKR 96 TM KEK +F +MA+ DK RYE EM+ Y+PPKG + +K+ KDPNAPKR Sbjct: 3866 TMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKR 4024 Score = 140 (49.3 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42 Identities = 25/58 (43%), Positives = 38/58 (65%), Frame = +2 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 SAFF FC++ R K+K +P +GD+AK+LG W++ + KQ YE A + K +YE+ Sbjct: 4160 SAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYER 4333 Score = 94 (33.1 bits), Expect = 0.024, Sum P(2) = 0.024 Identities = 21/57 (36%), Positives = 31/57 (54%), Frame = +2 Query: 16 AFFVQTCREEHKK-KHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72 AFF C +E K K + + +K+ +W + + K K+E MA+ DKARYER Sbjct: 4163 AFF-WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYER 4333 Score = 58 (20.4 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42 Identities = 11/58 (18%), Positives = 30/58 (51%), Frame = +1 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ Y+ GK + + + +++ +K ++ ++ E++ D+D+ + DDDE Sbjct: 4405 EMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDE 4578 Score = 48 (16.9 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16 Identities = 13/42 (30%), Positives = 21/42 (50%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 +K+ + E EKD Y A+ + KG V + KK+K+ Sbjct: 3875 DKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVG-RGKKRKQ 3997 Score = 47 (16.5 bits), Expect = 1.3e-40, Sum P(4) = 1.3e-40 Identities = 11/60 (18%), Positives = 30/60 (50%), Frame = +1 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE-- 214 ++ Y+ GK + + + +++ +K ++ ++ E++ D+D+ + DDDE Sbjct: 4405 EMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDENQ 4584 >Z93931 Human DNA sequence from PAC 438G17 on chromosome 6q22. Contains Length = 148,198 Minus Strand HSPs: Score = 264 (92.9 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33 Identities = 57/107 (53%), Positives = 71/107 (66%), Frame = -3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DPK+P+GKMS+YAFFVQ REEHKKK+ + +NF+EFSK CSERWKTMS KEK KF++ Sbjct: 95804 KVDPKEPKGKMSAYAFFVQMGREEHKKKNLEFPINFTEFSKNCSERWKTMSGKEKSKFDE 95625 Query: 62 MAKADKA------RYEREMK-----TYIPPKGE-TKKKFKDPNAPKR 96 MAKADK R + +++ T PPKG F N+ R Sbjct: 95624 MAKADKYTMIGR*RIKNQLREARRRTLTPPKGHHLDSSFSIQNSATR 95484 Score = 163 (57.4 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33 Identities = 38/70 (54%), Positives = 47/70 (67%), Frame = -1 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KKLGEMWNN +KQPY K A+LK KYEKD+A ++KGK D K G K KK Sbjct: 95443 KKLGEMWNNLNDSEKQPYITKVAQLK-KYEKDVADCKSKGKFDGPK-GSTKVAW---KKV 95279 Query: 186 EEEDEEDEED 195 EE+++E+EED Sbjct: 95278 EEDNKENEED 95249 Score = 150 (52.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21 Identities = 32/57 (56%), Positives = 40/57 (70%), Frame = -2 Query: 70 YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 126 Y+ E+K P KG KK +PNAPKRPPS FFLF SE+ KIK +P +SIGD++K Sbjct: 95601 YDWEIKN*EPAKGGKKK---NPNAPKRPPSGFFLFYSEFCHKIKSTNPDISIGDMSK 95440 Score = 43 (15.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20 Identities = 10/19 (52%), Positives = 12/19 (63%), Frame = -3 Query: 167 PDAAKKGVVKAEKSKKKKE 185 P + K GV +K KKKKE Sbjct: 43964 PFSRKNGVS*KKKKKKKKE 43908 Score = 42 (14.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20 Identities = 8/11 (72%), Positives = 10/11 (90%), Frame = -2 Query: 178 EKSKKKKEEEE 188 +K KKKK+EEE Sbjct: 69666 KKKKKKKKEEE 69634 Score = 42 (14.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20 Identities = 8/16 (50%), Positives = 12/16 (75%), Frame = -2 Query: 179 KSKKKKEEEEDEEDEE 194 K K KKE+E ++E +E Sbjct: 87591 KKKSKKEKERNKERKE 87544 Score = 42 (14.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10 Identities = 11/41 (26%), Positives = 20/41 (48%), Frame = -2 Query: 2 KGDPKKPRGKMSSY-AFFVQTCREEHKKKHPDASVNFSEFSK 42 K +P P+ S + F+ + C HK K + ++ + SK Sbjct: 95556 KKNPNAPKRPPSGFFLFYSEFC---HKIKSTNPDISIGDMSK 95440 Score = 41 (14.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20 Identities = 8/10 (80%), Positives = 9/10 (90%), Frame = -2 Query: 178 EKSKKKKEEE 187 +K KKKKEEE Sbjct: 69663 KKKKKKKEEE 69634 Score = 40 (14.1 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20 Identities = 7/18 (38%), Positives = 13/18 (72%), Frame = -2 Query: 175 VKAEKSKKKKEEEEDEED 192 V +KSKK+KE ++ ++ Sbjct: 87597 VSKKKSKKEKERNKERKE 87544 Score = 40 (14.1 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10 Identities = 9/21 (42%), Positives = 11/21 (52%), Frame = -3 Query: 70 YEREMKTYIPPKGETKKKFKD 90 Y RE P G ++KKF D Sbjct: 111818 YRREPLLLAPLSGLSQKKFAD 111756 >X80466 M.musculus HMG1-R-227 gene Length = 184 Plus Strand HSPs: Score = 331 (116.5 bits), Expect = 3.7e-28, P = 3.7e-28 Identities = 61/61 (100%), Positives = 61/61 (100%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA Sbjct: 1 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 180 Query: 64 K 64 K Sbjct: 181 K 183 Score = 82 (28.9 bits), Expect = 0.28, P = 0.24 Identities = 18/60 (30%), Positives = 29/60 (48%), Frame = +1 Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKA 147 DP P+ S++ F R + K +HP S+ + +KK E W +A +K +E A Sbjct: 1 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 180 >U22831 Caenorhabditis elegans cosmid F47D12. Length = 41,275 Plus Strand HSPs: Score = 203 (71.5 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27 Identities = 39/73 (53%), Positives = 51/73 (69%), Frame = +3 Query: 4 DPKKP--RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 D KP RGK S Y FFV+ C EEHKKK+P+ +V +E SKKCSE+WKTM EK +F + Sbjct: 36 DMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE 215 Query: 62 MAKADKARYEREM 74 +A+ D RY+ E+ Sbjct: 216 LAQKDAERYQAEV 254 Score = 133 (46.8 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27 Identities = 25/66 (37%), Positives = 40/66 (60%), Frame = +2 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 158 SAFF + + RP+I+ HP +G VA++LG+MW + K YE+KA K++Y D+ Sbjct: 608 SAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYA-DV 784 Query: 159 AAYRAK 164 ++ K Sbjct: 785 RIFKRK 802 Score = 88 (31.0 bits), Expect = 2.3, Sum P(2) = 0.90 Identities = 20/71 (28%), Positives = 36/71 (50%), Frame = +3 Query: 89 KDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 K P K P FF+ C E K K + + + +++KK E W D+K+ + + A Sbjct: 45 KPPVRGKTSPYGFFVKMCYEEHKK-KYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELA 221 Query: 148 AKLKEKYEKDIA 159 K E+Y+ +++ Sbjct: 222 QKDAERYQAEVS 257 Score = 86 (30.3 bits), Expect = 3.9, Sum P(2) = 0.98 Identities = 19/58 (32%), Positives = 32/58 (55%), Frame = +2 Query: 13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY 70 S++ F+ Q R E + HPD V + +++ + WK + + K +E A+ADK RY Sbjct: 608 SAFFFYSQDKRPEIQAGHPDWKVG--QVAQELGKMWKLVPQETKDMYEQKAQADKDRY 775 Score = 60 (21.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16 Identities = 16/49 (32%), Positives = 27/49 (55%), Frame = +2 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193 +K+ K+ EK+ K + R + K + KK K+ KSK +E D+ D+ Sbjct: 6380 RKSLKVSEKWIK-VLTTRCRWKLEYRKKNNKKS-KSKNMTNQENDQTDQ 6520 Score = 53 (18.7 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27 Identities = 14/38 (36%), Positives = 23/38 (60%), Frame = +1 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 KK V+K +K KKK+ E+ ++ +E ED ++ EE Sbjct: 9766 KKKVLKKQK-KKKRPTEKKTLNKVFDEPTEDSLNKSEE 9876 Score = 49 (17.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15 Identities = 17/65 (26%), Positives = 31/65 (47%), Frame = +1 Query: 140 KQPYEKKAA-KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK----KKKEEEEDEEDEE 194 K+P EKK K+ ++ +D + K V+K K + + KEE + ++E Sbjct: 9799 KRPTEKKTLNKVFDEPTEDSLNKSEETVNGNNDKRVIKERKKRFFK*RNKEERKSRKNEN 9978 Query: 195 DEEEE 199 +E E+ Sbjct: 9979 EEREK 9993 Score = 43 (15.1 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27 Identities = 8/12 (66%), Positives = 10/12 (83%), Frame = +3 Query: 85 KKKFKDPNAPKR 96 K+ KDP+APKR Sbjct: 384 KRAKKDPHAPKR 419 Score = 40 (14.1 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25 Identities = 9/24 (37%), Positives = 15/24 (62%), Frame = +1 Query: 187 EEDEEDEEDEEEEEDEEDEDEEED 210 E EE EDE + E+E+ ++ E+ Sbjct: 37579 ENLEELREDENKNEEEKQKNGLEN 37650 Score = 40 (14.1 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25 Identities = 9/31 (29%), Positives = 19/31 (61%), Frame = +1 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 V E++ K E E+ ++E++ EEE +++ Sbjct: 37546 VENLEEALKICENLEELREDENKNEEEKQKN 37638 >X66077 Z.mays MNB1b mRNA for DNA-binding protein Length = 918 Plus Strand HSPs: Score = 308 (108.4 bits), Expect = 2.0e-26, P = 2.0e-26 Identities = 68/162 (41%), Positives = 95/162 (58%), Frame = +3 Query: 52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111 SA + K + AKAD + P KG K KDPN PKR PSAFF+F E+R + Sbjct: 30 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 209 Query: 112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170 K ++P S+ V K G+ W + + DK PY KA KLK +Y K IAAY KG+ AA Sbjct: 210 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 386 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 KK K E+ +++EEE ++ + + +E+DEE +E+EDDD+ Sbjct: 387 KKAPAKEEE---EEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 506 Score = 308 (108.4 bits), Expect = 2.0e-26, P = 2.0e-26 Identities = 72/163 (44%), Positives = 95/163 (58%), Frame = +3 Query: 52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111 SA + K + AKAD + P KG K KDPN PKR PSAFF+F E+R + Sbjct: 30 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 209 Query: 112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170 K ++P S+ V K G+ W + + DK PY KA KLK +Y K IAAY KG+ AA Sbjct: 210 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 386 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED--EEEDDDDE 214 KK K E EEE++EE ++ + E DE+DE+ EE++DDDE Sbjct: 387 KKAPAKEE------EEEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 506 Score = 116 (40.8 bits), Expect = 0.0011, P = 0.0011 Identities = 29/91 (31%), Positives = 49/91 (53%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GK DP KP+ S++ F++ R+E K+K+P + + + K +RWK++S +K + Sbjct: 138 GK-DPNKPKRAPSAFFVFMEEFRKEFKEKNPK-NKSVAAVGKAAGDRWKSLSESDKAPY- 308 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDP 91 +AKA+K + E KGE+ K P Sbjct: 309 -VAKANKLKLEYNKAIAAYNKGESTAAKKAP 398 >X58282 Maize mRNA for a high mobility group protein Length = 885 Plus Strand HSPs: Score = 308 (108.4 bits), Expect = 2.1e-26, P = 2.1e-26 Identities = 68/162 (41%), Positives = 95/162 (58%), Frame = +1 Query: 52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111 SA + K + AKAD + P KG K KDPN PKR PSAFF+F E+R + Sbjct: 34 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 213 Query: 112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170 K ++P S+ V K G+ W + + DK PY KA KLK +Y K IAAY KG+ AA Sbjct: 214 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 390 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 KK K E+ +++EEE ++ + + +E+DEE +E+EDDD+ Sbjct: 391 KKAPAKEEE---EEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 510 Score = 308 (108.4 bits), Expect = 2.1e-26, P = 2.1e-26 Identities = 72/163 (44%), Positives = 95/163 (58%), Frame = +1 Query: 52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111 SA + K + AKAD + P KG K KDPN PKR PSAFF+F E+R + Sbjct: 34 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 213 Query: 112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170 K ++P S+ V K G+ W + + DK PY KA KLK +Y K IAAY KG+ AA Sbjct: 214 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 390 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED--EEEDDDDE 214 KK K E EEE++EE ++ + E DE+DE+ EE++DDDE Sbjct: 391 KKAPAKEE------EEEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 510 Score = 116 (40.8 bits), Expect = 0.0011, P = 0.0011 Identities = 29/91 (31%), Positives = 49/91 (53%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GK DP KP+ S++ F++ R+E K+K+P + + + K +RWK++S +K + Sbjct: 142 GK-DPNKPKRAPSAFFVFMEEFRKEFKEKNPK-NKSVAAVGKAAGDRWKSLSESDKAPY- 312 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDP 91 +AKA+K + E KGE+ K P Sbjct: 313 -VAKANKLKLEYNKAIAAYNKGESTAAKKAP 402 >X80462 M.musculus HMG1-R-154 gene Length = 190 Plus Strand HSPs: Score = 307 (108.1 bits), Expect = 1.3e-25, P = 1.3e-25 Identities = 57/62 (91%), Positives = 58/62 (93%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKGDPKKPRGKMSSYA FV+TC EEHKKKHPDASVNFS FSKKCSERWKTMSAKEKGKFE Sbjct: 4 GKGDPKKPRGKMSSYALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWKTMSAKEKGKFE 183 Query: 61 DM 62 M Sbjct: 184 GM 189 Score = 73 (25.7 bits), Expect = 2.7, P = 0.93 Identities = 17/57 (29%), Positives = 27/57 (47%), Frame = +1 Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYE 144 DP P+ S++ LF + K +HP S+ +KK E W +A +K +E Sbjct: 13 DPKKPRGKMSSYALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWKTMSAKEKGKFE 183 >AC002526 Human PAC clone DJ0558L21 from Xq23, complete sequence. Length = 134,580 Plus Strand HSPs: Score = 250 (88.0 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24 Identities = 59/125 (47%), Positives = 71/125 (56%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 KGD + P+GKMS+ FFV+TCREEHKK PD V+F K R + KEK Sbjct: 123669 KGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINLIK 123845 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + K + EMK Y P KG KKK + A P S FFLFCSE+ PKIK PG+S+ Sbjct: 123846 SQRWVKDA-DWEMKDYDPAKGHKKKKVR--KAC*SPASEFFLFCSEFYPKIKSPKPGVSV 124016 Query: 122 GDVAK 126 DV K Sbjct: 124017 ADVTK 124031 Score = 94 (33.1 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24 Identities = 20/50 (40%), Positives = 32/50 (64%), Frame = +1 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-AEKSKKKKEEE 187 +KQ KA KLKEKYEKD+A +++KGK +K + EK ++++ + Sbjct: 124069 EKQSCITKAVKLKEKYEKDVADFKSKGKFGGSKDPTHRYLEKGRRRQRRQ 124218 Score = 70 (24.6 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22 Identities = 14/22 (63%), Positives = 18/22 (81%), Frame = +2 Query: 184 KEEEEDEEDEEDEEEEEDEEDE 205 K+ EED+ED+E+EEE EEDE Sbjct: 124190 KKVEEDKEDKEEEEEMLGEEDE 124255 Score = 63 (22.2 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21 Identities = 14/22 (63%), Positives = 18/22 (81%), Frame = +2 Query: 184 KEEEEDEEDEEDEEE---EEDE 202 K+ EED+ED+E+EEE EEDE Sbjct: 124190 KKVEEDKEDKEEEEEMLGEEDE 124255 Score = 58 (20.4 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21 Identities = 12/21 (57%), Positives = 15/21 (71%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDE 196 K E+ K+ KEEEE+ EEDE Sbjct: 124193 KVEEDKEDKEEEEEMLGEEDE 124255 Score = 55 (19.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20 Identities = 16/45 (35%), Positives = 26/45 (57%), Frame = +2 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 P + K + A+K+ ++ EED+ED+EEEE+ E ED+ Sbjct: 124130 PTLSLKESLVAQKTPLTVTWKKVEEDKEDKEEEEEMLGE---EDE 124255 Score = 53 (18.7 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20 Identities = 9/19 (47%), Positives = 16/19 (84%), Frame = +2 Query: 196 EEEEEDEEDEDEEEDDDDE 214 EE++ED+E+E+E ++DE Sbjct: 124199 EEDKEDKEEEEEMLGEEDE 124255 Score = 51 (18.0 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20 Identities = 16/46 (34%), Positives = 26/46 (56%), Frame = +2 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 P + K + A+K+ ++ EED+ED+EEEE E E+D+ Sbjct: 124130 PTLSLKESLVAQKTPLTVTWKKVEEDKEDKEEEE----EMLGEEDE 124255 >Z11540 T.aestivum mRNA for high mobility group protein (HMGW) Length = 923 Plus Strand HSPs: Score = 289 (101.7 bits), Expect = 2.1e-24, P = 2.1e-24 Identities = 69/159 (43%), Positives = 96/159 (60%), Frame = +2 Query: 56 KG-KFEDMAKADKARYEREMKTYIPP--KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKI 112 KG K + AKAD A+ + K P KG+ K KDPN PKR PSAFF+F E+R + Sbjct: 80 KGAKSKGAAKAD-AKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEF 256 Query: 113 KGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171 K ++P S+ V K GE W + + +K PY KA KLK +Y K IAAY KG+ AA Sbjct: 257 KQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYN-KGESAAA- 430 Query: 172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +K+ +EE+E+E D+ E +D++DE +ED+DD+ Sbjct: 431 -AAPKKAAAKEVEEEDEEESDKSKSEINDDDDDEGSDEDEDDD 556 Score = 118 (41.5 bits), Expect = 0.00066, P = 0.00066 Identities = 29/84 (34%), Positives = 44/84 (52%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GK DP KP+ S++ F+ REE K+K+P + + + K ERWK++S EK + Sbjct: 182 GK-DPNKPKRAPSAFFVFMGEFREEFKQKNPK-NKSVAAVGKAAGERWKSLSESEKAPYV 355 Query: 61 DMAKADKARYEREMKTYIPPKGET 84 A K Y + + Y KGE+ Sbjct: 356 AKANKLKGEYNKAIAAY--NKGES 421 >Y14071 Arabidopsis thaliana mRNA for HMG alpha protein Length = 846 Plus Strand HSPs: Score = 281 (98.9 bits), Expect = 1.6e-23, P = 1.6e-23 Identities = 68/170 (40%), Positives = 97/170 (57%), Frame = +1 Query: 49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 108 K + KE K D K K + E T + E K K KDPN PKR PSAFF+F ++ Sbjct: 79 KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAK-KDPNKPKRAPSAFFVFLEDF 255 Query: 109 RPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA---K 164 R K E+P + ++ V K G+ W + + +K PYE+KAAK K +YEK + AY + Sbjct: 256 RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEE 435 Query: 165 GKPDAAKKGVVKAEKSKKKKEEE--EDE---EDEEDEEEEEDEEDEDEEED 210 G ++ K ++ + EEE E E +DEE+EEEE+D++D+DEEED Sbjct: 436 GSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 588 Score = 281 (98.9 bits), Expect = 1.6e-23, P = 1.6e-23 Identities = 66/170 (38%), Positives = 98/170 (57%), Frame = +1 Query: 49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 108 K + KE K D K K + E T + E K K KDPN PKR PSAFF+F ++ Sbjct: 79 KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAK-KDPNKPKRAPSAFFVFLEDF 255 Query: 109 RPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA---K 164 R K E+P + ++ V K G+ W + + +K PYE+KAAK K +YEK + AY + Sbjct: 256 RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEE 435 Query: 165 GKPDAAK-KGVVKAEKSKKKKEEEEDEE---DEEDEEEEEDEEDEDEEEDD 211 G ++ K + + E +EE ++E D+E+EEEEED++D+D+EE+D Sbjct: 436 GSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 588 Score = 155 (54.6 bits), Expect = 2.3e-09, P = 2.3e-09 Identities = 57/177 (32%), Positives = 86/177 (48%), Frame = +1 Query: 49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAF-FL--FC 105 K + KE K D K K + E T + E K K + P + F FL F Sbjct: 79 KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 258 Query: 106 SEYR---PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162 ++ P +K ++ V K G+ W + + +K PYE+KAAK K +YEK + AY Sbjct: 259 VTFKKENPNVK------AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYN 420 Query: 163 A---KGKPDAAKKGVVKAEKSKKKKEEE--EDE---EDEEDEEEEEDEEDEDEEE----- 209 +G ++ K ++ + EEE E E +DEE+EEEE+D++D+DEEE Sbjct: 421 KNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED*IRD 600 Query: 210 --- 209 Sbjct: 601 RNQ 609 Score = 132 (46.5 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 27/76 (35%), Positives = 42/76 (55%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP KP+ S++ F++ R KK++P+ S K ++WK+MS EK +E+ Sbjct: 193 KKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKA-VSAVGKAGGQKWKSMSQAEKAPYEE 369 Query: 62 MAKADKARYEREMKTY 77 A KA YE++M Y Sbjct: 370 KAAKRKAEYEKQMDAY 417 >Z71255 S.cerevisiae chromosome XVI 165536 bp sequence, cen rightwards. Length = 165,536 Plus Strand HSPs: Score = 114 (40.1 bits), Expect = 0.0040, P = 0.0040 Identities = 31/139 (22%), Positives = 68/139 (48%), Frame = +3 Query: 70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121 Y R+ + K ++ +P + PK RP +AF LF Y + E G+ I Sbjct: 149259 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 149438 Query: 122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 +++K +G W +DK +E A K K ++E+ Y+ K + KK ++ E Sbjct: 149439 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKPVRKSKKKQLLLKEIE 149618 Query: 181 KKKKEEEEDEEDEEDEEEE 199 +++++++++++ ++ + + Sbjct: 149619 QQQQQQQKEQQQQKQSQPQ 149675 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011 Identities = 36/139 (25%), Positives = 70/139 (50%), Frame = +3 Query: 70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121 Y R+ + K ++ +P + PK RP +AF LF Y + E G+ I Sbjct: 149259 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 149438 Query: 122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 +++K +G W +DK +E A K K ++E+ Y K KP V K++K Sbjct: 149439 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEY--KYKP------VRKSKKK 149594 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDE 207 + +E E ++ ++ +E+++ ++ + + Sbjct: 149595 QLLLKEIEQQQQQQQKEQQQQKQSQPQ 149675 Score = 45 (15.8 bits), Expect = 0.054, Sum P(2) = 0.053 Identities = 16/50 (32%), Positives = 24/50 (48%), Frame = +2 Query: 11 KMSSYAFFVQT---CREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKG 57 K+ S AF V C + ++ PD V+ S+F E K+ S + KG Sbjct: 52760 KVCS*AFVVTANAFCSADCHERIPDTRVSKSQFISAHCENLKSSS*QIKG 52909 Score = 41 (14.4 bits), Expect = 0.14, Sum P(2) = 0.13 Identities = 10/24 (41%), Positives = 13/24 (54%), Frame = +1 Query: 24 EEHKKKHPDASVNFSEFSKKCSER 47 E H + H DA V EFS++ R Sbjct: 47494 EPHSR-HTDACV*SDEFSRRSCNR 47562 Score = 40 (14.1 bits), Expect = 0.17, Sum P(2) = 0.16 Identities = 5/22 (22%), Positives = 17/22 (77%), Frame = +1 Query: 53 AKEKGKFEDMAKADKARYEREM 74 A ++G+F ++ K +K++ ++++ Sbjct: 14596 AADQGRFVNITKVEKSKEDKDI 14661 Minus Strand HSPs: Score = 206 (72.5 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = -3 Query: 74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133 M T PK T +K KDPNAPKR SA+ F +E R ++ E+P ++ G V KKLGE W Sbjct: 135597 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 135418 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 ++KQPYE KA K++YE + Y A Sbjct: 135417 ALTPEEKQPYEAKAQADKKRYESEKELYNA 135328 Score = 152 (53.5 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = -3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF R+ + ++PD + F + KK E+WK ++ +EK +E Sbjct: 135555 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 135382 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 135381 KAQADKKRYESEKELY 135334 Score = 124 (43.7 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23 Identities = 20/52 (38%), Positives = 39/52 (75%), Frame = -3 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 + G D + E+ ++++EEEE+EE+EE+EE+EE+E++E++++D+DD Sbjct: 6438 KTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDD 6283 Score = 122 (42.9 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23 Identities = 22/37 (59%), Positives = 31/37 (83%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE EE+E EEE DE Sbjct: 6399 EEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDE 6289 Score = 120 (42.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22 Identities = 19/37 (51%), Positives = 34/37 (91%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEE+E+EE E+E++ D+D+ Sbjct: 6393 EEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDD 6283 Score = 118 (41.5 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22 Identities = 21/55 (38%), Positives = 40/55 (72%), Frame = -3 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD--E 214 + G D + E+ ++++EEEE+EE+EE+EE+EE+E++E++++D+DD E Sbjct: 6438 KTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDDSNE 6274 Score = 114 (40.1 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22 Identities = 19/40 (47%), Positives = 33/40 (82%), Frame = -3 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 VK ++ +++E+EE+EE+EEEEE+EE+E+EEE++ +E Sbjct: 6441 VKTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEE 6322 Score = 109 (38.4 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21 Identities = 18/39 (46%), Positives = 32/39 (82%), Frame = -3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K + S + ++DEE+EE+EEEEE+EE+E+EEE+++++ Sbjct: 6444 KVKTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEK 6328 Score = 91 (32.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19 Identities = 20/67 (29%), Positives = 40/67 (59%), Frame = -3 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD-------- 213 + G D + E+ ++++EEEE+EE+EE+EE+EE+E++E++++D+DD Sbjct: 6438 KTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDDSNEVNGLE 6259 Query: 214 ------E 214 + Sbjct: 6258 KGGDSND 6238 Score = 57 (20.1 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16 Identities = 14/47 (29%), Positives = 29/47 (61%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDE--------------EED 210 E+ ++++EEEE EE+E++EE+++DE+D +E + + Sbjct: 6363 EEEEEEEEEEEKEEEEKEEEQQQDEDDSNEVNGLEKGGDSNDSTKNN 6223 Score = 53 (18.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15 Identities = 10/35 (28%), Positives = 17/35 (48%), Frame = -3 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 VK + S K+ DE++E + + D D E+ Sbjct: 7212 VKLDLSSKELNTSSDEDNESEGNTTDSSSDSDSED 7108 Score = 51 (18.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08 Identities = 15/58 (25%), Positives = 31/58 (53%), Frame = -3 Query: 146 KAAKLKEKY-EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 K K+++KY ++D + + KG+ K ++ +KKEE E ED + + +++ Sbjct: 6033 KLKKIQKKYADQDETERLLRLEALGTLKGIEKQQQ--RKKEEIMKREVREDRKNKREKQ 5863 Score = 50 (17.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08 Identities = 14/48 (29%), Positives = 21/48 (43%), Frame = -1 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 +P E + + K +K + K K KK K +K KKKK + Sbjct: 6437 KPVEMRIMVMMTKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKSNSK 6294 Score = 48 (16.9 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15 Identities = 9/51 (17%), Positives = 32/51 (62%), Frame = -1 Query: 161 YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 + K KP + V+ +K KKKK +++ ++ ++ +++++ ++ + +++ + Sbjct: 6452 FYGK*KPVEMRIMVMMTKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKSN 6300 Score = 46 (16.2 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15 Identities = 9/12 (75%), Positives = 10/12 (83%), Frame = -2 Query: 191 EDEEDEEEEEDE 202 EDE+ EEEEE E Sbjct: 20434 EDEDGEEEEEPE 20399 Score = 46 (16.2 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15 Identities = 12/39 (30%), Positives = 17/39 (43%), Frame = -3 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 VK + S K+ DE D E E + D + D +D Sbjct: 7212 VKLDLSSKELNTSSDE----DNESEGNTTDSSSDSDSED 7108 Score = 46 (16.2 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15 Identities = 11/41 (26%), Positives = 18/41 (43%), Frame = -3 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE--EDDDD 213 VK + S K+ DE++E + + D D E E + Sbjct: 7212 VKLDLSSKELNTSSDEDNESEGNTTDSSSDSDSEDMESSKE 7090 Score = 45 (15.8 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15 Identities = 9/17 (52%), Positives = 12/17 (70%), Frame = -2 Query: 194 EDEEEEEDEEDEDEEED 210 EDE+ EE+EE E + D Sbjct: 20434 EDEDGEEEEEPEIQNGD 20384 Score = 44 (15.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14 Identities = 11/40 (27%), Positives = 21/40 (52%), Frame = -1 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 E I K K +K K +K KKKK++++ ++ ++ Sbjct: 6428 EMRIMVMMTKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKK 6309 Score = 43 (15.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14 Identities = 8/16 (50%), Positives = 12/16 (75%), Frame = -2 Query: 194 EDEEEEEDEEDEDEEE 209 +D E+ED E+E+E E Sbjct: 20446 DDVYEDEDGEEEEEPE 20399 Score = 42 (14.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14 Identities = 17/64 (26%), Positives = 24/64 (37%), Frame = -3 Query: 155 EKDIAAYRAKGKPDAAKKGV---VKAEKSKKKKEEEEDE-EDEEDEEEEEDEEDEDEEED 210 EK I + + KG A + +K K K + E DE+ E + D D Sbjct: 7302 EKLIKSEQKKGNRIAQLLNLPLNLKQNKISVKLDLSSKELNTSSDEDNESEGNTTDSSSD 7123 Query: 211 DDDE 214 D E Sbjct: 7122 SDSE 7111 Score = 40 (14.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14 Identities = 7/12 (58%), Positives = 10/12 (83%), Frame = -2 Query: 200 EDEEDEDEEEDD 211 EDE+ E+EEE + Sbjct: 20434 EDEDGEEEEEPE 20399 Score = 40 (14.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14 Identities = 7/12 (58%), Positives = 10/12 (83%), Frame = -2 Query: 203 EDEDEEEDDDDE 214 EDED EE+++ E Sbjct: 20434 EDEDGEEEEEPE 20399 Score = 40 (14.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14 Identities = 10/36 (27%), Positives = 19/36 (52%), Frame = -2 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--D 210 +++S E+EE + D E+ +++ E EE D Sbjct: 83305 SQESVPGNEKEEPQNDASTTEKNKEKSTESEEYSID 83198 Score = 40 (14.1 bits), Expect = 0.010, Sum P(2) = 0.010 Identities = 10/27 (37%), Positives = 15/27 (55%), Frame = -3 Query: 18 FVQTCREEHKKK--HPDASVNFSEFSKK 43 F++TC +H K+ +N S SKK Sbjct: 35979 FIETCHPKHLKRGTKEQEDIN-SSTSKK 35899 Score = 40 (14.1 bits), Expect = 0.010, Sum P(2) = 0.010 Identities = 8/32 (25%), Positives = 17/32 (53%), Frame = -2 Query: 9 RGKMSSYAFFVQTCRE--EHKKKHPDASVNFS 38 +G +S+ +F C +H+K P ++N + Sbjct: 60988 KGTISTESFAALVCTRSVKHRKSFPTETLNMN 60893 >U39747 Ipomoea nil high mobility group protein 2 HMG2 mRNA, complete cds. Length = 835 Plus Strand HSPs: Score = 269 (94.7 bits), Expect = 3.0e-22, P = 3.0e-22 Identities = 58/145 (40%), Positives = 85/145 (58%), Frame = +3 Query: 64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118 K K++ + + K + +G ETKK KDPN PKRPPSAFF+F ++R K +HP Sbjct: 144 KGGKSKAKSDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNN 323 Query: 119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178 S+ V K G+ W +K P+ KA K K++YEK + AY K +AA + E Sbjct: 324 KSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQAGEAADE----EE 491 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K + E +DEEDE+ E++D++D+DE Sbjct: 492 SDKSRSEVNDDEEDEDGSAEDDDDDDDDE 578 Score = 260 (91.5 bits), Expect = 2.7e-21, P = 2.7e-21 Identities = 63/151 (41%), Positives = 87/151 (57%), Frame = +3 Query: 64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118 K K++ + + K + +G ETKK KDPN PKRPPSAFF+F ++R K +HP Sbjct: 144 KGGKSKAKSDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNN 323 Query: 119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178 S+ V K G+ W +K P+ KA K K++YEK + AY K +AA + E Sbjct: 324 KSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQAGEAADE-----E 488 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +S K + E D DEEDE D ED+++DDDDE Sbjct: 489 ESDKSRSEVND--DEEDE----DGSAEDDDDDDDDE 578 Score = 118 (41.5 bits), Expect = 0.00058, P = 0.00058 Identities = 23/74 (31%), Positives = 42/74 (56%), Frame = +3 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R+ +K+KHP+ + + + K ++WK ++ EK F A Sbjct: 234 DPNKPKRPPSAFFVFMEDFRKTYKEKHPN-NKSVAAVGKAGGDKWKQLTDAEKAPFIAKA 410 Query: 64 KADKARYEREMKTY 77 + K YE+ M+ Y Sbjct: 411 EKRKQEYEKSMQAY 452 >Z50799 H.vulgare mRNA for HMG1/2-like protein. Length = 974 Plus Strand HSPs: Score = 263 (92.6 bits), Expect = 1.1e-21, P = 1.1e-21 Identities = 63/157 (40%), Positives = 89/157 (56%), Frame = +2 Query: 56 KG-KFEDMAKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KG K + AKAD + P KG+ K KDPN PKR PSAFF+F E+R + K Sbjct: 92 KGAKSKGAAKADTKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFK 271 Query: 114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 ++P S+ V K GE W + + +K P+ KA KLK +Y K IA+Y KG+ A Sbjct: 272 QKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKGEYNKAIASYN-KGESTTAAP 448 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 K SK+ +EE+E+E D+ E +D++DE +E +D Sbjct: 449 ---KKASSKEVEEEDEEESDKSKSEINDDDDDEGSDEAED 559 Score = 263 (92.6 bits), Expect = 1.1e-21, P = 1.1e-21 Identities = 64/159 (40%), Positives = 89/159 (55%), Frame = +2 Query: 56 KG-KFEDMAKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KG K + AKAD + P KG+ K KDPN PKR PSAFF+F E+R + K Sbjct: 92 KGAKSKGAAKADTKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFK 271 Query: 114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 ++P S+ V K GE W + + +K P+ KA KLK +Y K IA+Y KG+ A Sbjct: 272 QKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKGEYNKAIASYN-KGESTTA-- 442 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 A K KE EE++E+E D+ + E +D+D+E D+ E Sbjct: 443 ----APKKASSKEVEEEDEEESDKSKSEINDDDDDEGSDEAE 556 Score = 234 (82.4 bits), Expect = 1.3e-18, P = 1.3e-18 Identities = 64/159 (40%), Positives = 85/159 (53%), Frame = +2 Query: 56 KG-KFEDMAKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KG K + AKAD + P KG+ K KDPN PKR PSAFF+F E+R + K Sbjct: 92 KGAKSKGAAKADTKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFK 271 Query: 114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA-- 170 ++P S+ V K GE W + + +K P+ KA KLK +Y K IA+Y KG+ A Sbjct: 272 QKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKGEYNKAIASYN-KGESTTAAP 448 Query: 171 KKGVVKA------EKSKKKKEEEEDEEDEEDEEEEEDE-E 203 KK K E+S K K E D++D+E +E ED E Sbjct: 449 KKASSKEVEEEDEEESDKSKSEINDDDDDEGSDEAEDAAE 568 Score = 122 (42.9 bits), Expect = 0.00022, P = 0.00022 Identities = 30/84 (35%), Positives = 45/84 (53%), Frame = +2 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GK DP KP+ S++ F+ REE K+K+P + + + K ERWK++S EK F Sbjct: 194 GK-DPNKPKRAPSAFFVFMGEFREEFKQKNPK-NKSVAAVGKAAGERWKSLSESEKAPFV 367 Query: 61 DMAKADKARYEREMKTYIPPKGET 84 A K Y + + +Y KGE+ Sbjct: 368 AKANKLKGEYNKAIASY--NKGES 433 >AB000637 Canavalia gladiata mRNA for HMG-1, complete cds. Length = 736 Plus Strand HSPs: Score = 263 (92.6 bits), Expect = 1.5e-21, P = 1.5e-21 Identities = 62/148 (41%), Positives = 85/148 (57%), Frame = +2 Query: 64 KADKARYEREMKTYIPPKG--ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLS 120 KAD + +K G ++KK KDPN PKRPPSAFF+F SE+R + K EHP S Sbjct: 32 KADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKS 211 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + V K G+ W + + +K P+ +A K KE+Y+K I AY K K + EKS Sbjct: 212 VAVVGKAGGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRK----LEGKNPSEEEKS 379 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 K K E DE+ EDEEE++D+E +D+ Sbjct: 380 DKSKSEVNDED--EDEEEDQDDE*SSWTQDE 466 Score = 249 (87.7 bits), Expect = 4.5e-20, P = 4.5e-20 Identities = 62/151 (41%), Positives = 85/151 (56%), Frame = +2 Query: 64 KADKARYEREMKTYIPPKG--ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLS 120 KAD + +K G ++KK KDPN PKRPPSAFF+F SE+R + K EHP S Sbjct: 32 KADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKS 211 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + V K G+ W + + +K P+ +A K KE+Y+K I AY K +G Sbjct: 212 VAVVGKAGGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRK------LEG------- 352 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K EE++ D+ + E ++EDEDEEED DDE Sbjct: 353 --KNPSEEEKSDKS--KSEVNDEDEDEEEDQDDE 442 Score = 118 (41.5 bits), Expect = 0.00048, P = 0.00048 Identities = 23/74 (31%), Positives = 41/74 (55%), Frame = +2 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F+ RE++KK+HP + + + K ++WK++S EK F A Sbjct: 116 DPNKPKRPPSAFFVFMSEFREQYKKEHP-TNKSVAVVGKAGGDKWKSLSDAEKAPFVARA 292 Query: 64 KADKARYEREMKTY 77 + K Y++ + Y Sbjct: 293 EKKKEEYDKSILAY 334 >L12169 Japanese morning glory high mobility group protein mRNA sequence. Length = 726 Plus Strand HSPs: Score = 261 (91.9 bits), Expect = 2.5e-21, P = 2.5e-21 Identities = 53/124 (42%), Positives = 76/124 (61%), Frame = +3 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQ 141 +TKK KDPN PKRPPSAFF+F ++R K +HP S+ V K G+ W A +K Sbjct: 153 KTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKA 332 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201 P+ KA K K++YEK++ AY K AA G + E+S K + E D+++++D E+D Sbjct: 333 PFISKAEKRKQEYEKNLQAYNKK---QAA--GAAEEEESDKSRSEVNDDDEDQDGSGEDD 497 Query: 202 EEDED 206 ED+D Sbjct: 498 SEDDD 512 Score = 251 (88.4 bits), Expect = 2.8e-20, P = 2.8e-20 Identities = 57/130 (43%), Positives = 76/130 (58%), Frame = +3 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQ 141 +TKK KDPN PKRPPSAFF+F ++R K +HP S+ V K G+ W A +K Sbjct: 153 KTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKA 332 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201 P+ KA K K++YEK++ AY K AA G + E+S K + E D D+ED+ D Sbjct: 333 PFISKAEKRKQEYEKNLQAYNKK---QAA--GAAEEEESDKSRSEVND--DDEDQ----D 479 Query: 202 EEDEDEEEDDD 212 ED+ EDDD Sbjct: 480 GSGEDDSEDDD 512 Score = 122 (42.9 bits), Expect = 0.00014, P = 0.00014 Identities = 23/74 (31%), Positives = 43/74 (58%), Frame = +3 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R+ +K+KHP+ + + + K ++WK ++A EK F A Sbjct: 174 DPNKPKRPPSAFFVFMEDFRKTYKEKHPN-NKSVAVVGKAGGDKWKQLTAAEKAPFISKA 350 Query: 64 KADKARYEREMKTY 77 + K YE+ ++ Y Sbjct: 351 EKRKQEYEKNLQAY 392 >Z21703 V.faba mRNA for HMG box. Length = 823 Plus Strand HSPs: Score = 260 (91.5 bits), Expect = 2.8e-21, P = 2.8e-21 Identities = 57/121 (47%), Positives = 82/121 (67%), Frame = +1 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAA 137 P KG K+ KDPN PKRPPSAFF+F +++R + K +HP S+ V K GE W + + Sbjct: 205 PAKG---KEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSE 375 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAK--GKPDAAKKGVVKAEKSKKK-KEEEEDEEDEE 194 ++K PY +A K KE+YE + AY K GK D ++G ++KSK + +E+EDEEDEE Sbjct: 376 EEKAPYVDRALKKKEEYEITLQAYNKKLEGKDD--EEG---SDKSKSEVNDEDEDEEDEE 540 Query: 195 DEEEE 199 DE+++ Sbjct: 541 DEDDD 555 Score = 245 (86.2 bits), Expect = 1.1e-19, P = 1.1e-19 Identities = 59/157 (37%), Positives = 88/157 (56%), Frame = +1 Query: 57 GKFEDMAKADKARYEREMKTYIPPKGETK----KKFKDPNAPKRPPSAFFLFCSEYRPKI 112 GK + +K + + K KG K K+ KDPN PKRPPSAFF+F +++R + Sbjct: 118 GKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQY 297 Query: 113 KGEHPG-LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171 K +HP S+ V K GE W + + ++K PY +A K KE+YE + AY K Sbjct: 298 KKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK------L 459 Query: 172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 +G K++EE + + E +EDE++EDEE++DDD Sbjct: 460 EG----------KDDEEGSDKSKSEVNDEDEDEEDEEDEDDD 555 Score = 136 (47.9 bits), Expect = 3.0e-06, P = 3.0e-06 Identities = 26/74 (35%), Positives = 42/74 (56%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F+ RE++KK HP+ + + + K C E WK++S +EK + D A Sbjct: 229 DPNKPKRPPSAFFVFMADFREQYKKDHPN-NKSVAAVGKACGEEWKSLSEEEKAPYVDRA 405 Query: 64 KADKARYEREMKTY 77 K YE ++ Y Sbjct: 406 LKKKEEYEITLQAY 447 Score = 95 (33.4 bits), Expect = 0.31, P = 0.27 Identities = 22/65 (33%), Positives = 37/65 (56%), Frame = +1 Query: 151 KEKYEKDIAAY--RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 K E++ A Y RA K + + + K + K++EE + + E +EDE++EDEE Sbjct: 361 KSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLEGKDDEEGSDKSKSEVNDEDEDEEDEE 540 Query: 209 EDDDD 213 ++DDD Sbjct: 541 DEDDD 555 >AF002226 Nicotiana tabacum DNA-binding protein (T231) mRNA, complete cds. Length = 759 Plus Strand HSPs: Score = 260 (91.5 bits), Expect = 3.0e-21, P = 3.0e-21 Identities = 57/141 (40%), Positives = 85/141 (60%), Frame = +2 Query: 64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118 K K++ + K + K ETKK KDPN PKRPPSAFF+F E+R K +HP Sbjct: 29 KGGKSKAGADSKLGVRKKATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 208 Query: 119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178 S+ V K G+ W + +K PY+ KA K K +Y+K++ AY K DA + +++ Sbjct: 209 KSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQAGDAEED---ESD 379 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDE 202 KSK + +++DE+D+ EEEE+D+ Sbjct: 380 KSKSEVHDDDDEDDDGSEEEEDDD 451 Score = 247 (86.9 bits), Expect = 7.2e-20, P = 7.2e-20 Identities = 61/150 (40%), Positives = 84/150 (56%), Frame = +2 Query: 64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118 K K++ + K + K ETKK KDPN PKRPPSAFF+F E+R K +HP Sbjct: 29 KGGKSKAGADSKLGVRKKATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 208 Query: 119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178 S+ V K G+ W + +K PY+ KA K K +Y+K++ AY K DA + + Sbjct: 209 KSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQAGDAEE------D 370 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 +S K K E D++DE+D D EEE+DDD Sbjct: 371 ESDKSKSEVHDDDDEDD--------DGSEEEEDDD 451 Score = 121 (42.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05 Identities = 23/74 (31%), Positives = 42/74 (56%), Frame = +2 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R+ +K+KHP+ + + + K + WK +S EK ++ A Sbjct: 119 DPNKPKRPPSAFFVFMEEFRKTYKEKHPN-NKSVAAVGKAGGDAWKKLSEAEKAPYQAKA 295 Query: 64 KADKARYEREMKTY 77 + KA Y++ M Y Sbjct: 296 EKRKAEYQKNMDAY 337 Score = 98 (34.5 bits), Expect = 0.13, P = 0.12 Identities = 26/67 (38%), Positives = 39/67 (58%), Frame = +2 Query: 151 KEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE-EEEDEEDED-- 206 K+ E + A Y+AK K A + + A K+ + EEDE D+ E ++D+ED+D Sbjct: 251 KKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQAGDAEEDESDKSKSEVHDDDDEDDDGS 430 Query: 207 EEEDDDD 213 EEE+DDD Sbjct: 431 EEEEDDD 451 Score = 43 (15.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05 Identities = 10/24 (41%), Positives = 15/24 (62%), Frame = +1 Query: 165 GKPDAAKKGVVKAEKSKKKKEEEE 188 G P KK K +K KKKK++++ Sbjct: 688 GFPFKKKKKKKKKKKKKKKKKKKK 759 >X80465 M.musculus HMG1-R-168 gene Length = 181 Plus Strand HSPs: Score = 219 (77.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20 Identities = 41/49 (83%), Positives = 44/49 (89%), Frame = +2 Query: 11 KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 59 K YAFF+QTC+EEHK K+ DASVNFSEFSKKCSERWKTMSAKEKGKF Sbjct: 35 KCPVYAFFMQTCQEEHKTKYLDASVNFSEFSKKCSERWKTMSAKEKGKF 181 Score = 55 (19.4 bits), Expect = 0.027, Sum P(2) = 0.027 Identities = 13/46 (28%), Positives = 21/46 (45%), Frame = +2 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 K P AFF+ + K K ++ + +KK E W +A +K Sbjct: 35 KCPVYAFFMQTCQEEHKTKYLDASVNFSEFSKKCSERWKTMSAKEK 172 Score = 54 (19.0 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20 Identities = 11/13 (84%), Positives = 11/13 (84%), Frame = +1 Query: 1 GKGDPKKPRGKMS 13 GKGDPKK R KMS Sbjct: 4 GKGDPKKLRRKMS 42 >Y09482 A.thaliana mRNA for HMG 1 protein Length = 738 Plus Strand HSPs: Score = 252 (88.7 bits), Expect = 2.2e-20, P = 2.2e-20 Identities = 62/149 (41%), Positives = 85/149 (57%), Frame = +1 Query: 60 EDMAKADKARYE-REMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115 E + K K++ E R K + P KG K KDPN PKRP SAFF+F ++R K E Sbjct: 40 ESIMKGAKSKAETRSTKLSVTKKPAKG-AKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEE 216 Query: 116 HP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV 174 HP S+ V K GE W + + +K PY KA K K +YEK++ AY K ++G Sbjct: 217 HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK-----LEEGP 381 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 + E+S K E DE+D ED EEE+++D + E Sbjct: 382 KEDEESDKSVSEVNDEDDAEDGSEEEEDDD*EVE 483 Score = 164 (57.7 bits), Expect = 4.6e-11, P = 4.6e-11 Identities = 59/154 (38%), Positives = 76/154 (49%), Frame = +1 Query: 60 EDMAKADKARYE-REMKTYIP--PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116 E + K K++ E R K + P K KDPN PKRP SAFF+F ++R K EH Sbjct: 40 ESIMKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 219 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176 P K + AA K EK K + + A Y AK D K K Sbjct: 220 P--------KN-----KSVAAVGKAGGEK----WKSLSDSEKAPYVAKA--DKRKVEYEK 342 Query: 177 AEKSKKKKEEEEDEEDEEDEE------EEEDEEDEDEEEDDDD 213 K+ KK EE +EDEE ++ +E+D ED EEE+DDD Sbjct: 343 NMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 471 Score = 124 (43.7 bits), Expect = 8.3e-05, P = 8.3e-05 Identities = 27/74 (36%), Positives = 45/74 (60%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R +K++HP + + + K E+WK++S EK + +A Sbjct: 139 DPNKPKRPSSAFFVFMEDFRVTYKEEHPK-NKSVAAVGKAGGEKWKSLSDSEKAPY--VA 309 Query: 64 KADKAR--YEREMKTY 77 KADK + YE+ MK Y Sbjct: 310 KADKRKVEYEKNMKAY 357 Score = 95 (33.4 bits), Expect = 0.28, P = 0.24 Identities = 28/69 (40%), Positives = 37/69 (53%), Frame = +1 Query: 149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE------EEEDE 202 K K + + A Y AK D K K K+ KK EE +EDEE ++ +E+D Sbjct: 265 KWKSLSDSEKAPYVAKA--DKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDA 438 Query: 203 EDEDEEEDDDD 213 ED EEE+DDD Sbjct: 439 EDGSEEEEDDD 471 >Y14073 Arabidopsis thaliana mRNA for HMG beta2 protein Length = 731 Plus Strand HSPs: Score = 252 (88.7 bits), Expect = 2.2e-20, P = 2.2e-20 Identities = 62/149 (41%), Positives = 85/149 (57%), Frame = +3 Query: 60 EDMAKADKARYE-REMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115 E + K K++ E R K + P KG K KDPN PKRP SAFF+F ++R K E Sbjct: 42 ESIMKGAKSKAETRSTKLSVTKKPAKG-AKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEE 218 Query: 116 HP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV 174 HP S+ V K GE W + + +K PY KA K K +YEK++ AY K ++G Sbjct: 219 HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK-----LEEGP 383 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 + E+S K E DE+D ED EEE+++D + E Sbjct: 384 KEDEESDKSVSEVNDEDDAEDGSEEEEDDD*EVE 485 Score = 164 (57.7 bits), Expect = 4.6e-11, P = 4.6e-11 Identities = 59/154 (38%), Positives = 76/154 (49%), Frame = +3 Query: 60 EDMAKADKARYE-REMKTYIP--PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116 E + K K++ E R K + P K KDPN PKRP SAFF+F ++R K EH Sbjct: 42 ESIMKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 221 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176 P K + AA K EK K + + A Y AK D K K Sbjct: 222 P--------KN-----KSVAAVGKAGGEK----WKSLSDSEKAPYVAKA--DKRKVEYEK 344 Query: 177 AEKSKKKKEEEEDEEDEEDEE------EEEDEEDEDEEEDDDD 213 K+ KK EE +EDEE ++ +E+D ED EEE+DDD Sbjct: 345 NMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 473 Score = 124 (43.7 bits), Expect = 8.0e-05, P = 8.0e-05 Identities = 27/74 (36%), Positives = 45/74 (60%), Frame = +3 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R +K++HP + + + K E+WK++S EK + +A Sbjct: 141 DPNKPKRPSSAFFVFMEDFRVTYKEEHPK-NKSVAAVGKAGGEKWKSLSDSEKAPY--VA 311 Query: 64 KADKAR--YEREMKTY 77 KADK + YE+ MK Y Sbjct: 312 KADKRKVEYEKNMKAY 359 Score = 95 (33.4 bits), Expect = 0.28, P = 0.24 Identities = 28/69 (40%), Positives = 37/69 (53%), Frame = +3 Query: 149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE------EEEDE 202 K K + + A Y AK D K K K+ KK EE +EDEE ++ +E+D Sbjct: 267 KWKSLSDSEKAPYVAKA--DKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDA 440 Query: 203 EDEDEEEDDDD 213 ED EEE+DDD Sbjct: 441 EDGSEEEEDDD 473 >Y14072 Arabidopsis thaliana mRNA for HMG beta1 protein Length = 686 Plus Strand HSPs: Score = 251 (88.4 bits), Expect = 3.0e-20, P = 3.0e-20 Identities = 61/151 (40%), Positives = 86/151 (56%), Frame = +1 Query: 60 EDMAKADKARYE-REMKTYI---PPKGETKKKF--KDPNAPKRPPSAFFLFCSEYRPKIK 113 E + K K++ E R K + P KG + K KDPN PKRP SAFF+F ++R K Sbjct: 25 ESIMKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFK 204 Query: 114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 E+P S+ V K G+ W + + +K PY KA K K +YEK+I AY K ++ Sbjct: 205 KENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKK-----LEE 369 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 G + E+S K E DE+D ED EEE+++D + E Sbjct: 370 GPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD*EAE 477 Score = 162 (57.0 bits), Expect = 8.1e-11, P = 8.1e-11 Identities = 65/154 (42%), Positives = 86/154 (55%), Frame = +1 Query: 60 EDMAKADKARYE-REMKTYI---PPKGETKKKF--KDPNAPKRPPSAFFLFCSEYRPKIK 113 E + K K++ E R K + P KG + K KDPN PKRP SAFF+F ++R K Sbjct: 25 ESIMKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFK 204 Query: 114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173 E+P VA +G+ AA DK K+ EK A Y AK A+K Sbjct: 205 KENPKNK--SVAT-VGK-----AAGDKW----KSLSDSEK-----APYVAK-----AEKR 318 Query: 174 VVKAEKSKK---KKEEEEDEEDEEDEE------EEEDEEDEDEEEDDDD 213 V+ EK+ K KK EE +EDEE ++ +E+D ED EEE+DDD Sbjct: 319 KVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 465 Score = 119 (41.9 bits), Expect = 0.00030, P = 0.00030 Identities = 23/74 (31%), Positives = 41/74 (55%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ RE KK++P + + + K ++WK++S EK + A Sbjct: 133 DPNKPKRPASAFFVFMEDFRETFKKENPK-NKSVATVGKAAGDKWKSLSDSEKAPYVAKA 309 Query: 64 KADKARYEREMKTY 77 + K YE+ +K Y Sbjct: 310 EKRKVEYEKNIKAY 351 Score = 93 (32.7 bits), Expect = 0.44, P = 0.35 Identities = 33/74 (44%), Positives = 44/74 (59%), Frame = +1 Query: 146 KAA--KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK---KKEEEEDEEDEEDEE--- 197 KAA K K + + A Y AK A+K V+ EK+ K KK EE +EDEE ++ Sbjct: 244 KAAGDKWKSLSDSEKAPYVAK-----AEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVS 408 Query: 198 ---EEEDEEDEDEEEDDDD 213 +E+D ED EEE+DDD Sbjct: 409 EVNDEDDAEDGSEEEEDDD 465 >L42571 Cricetulus griseus ribosomal transcription factor (UBF2) mRNA, Length = 2305 Plus Strand HSPs: Score = 162 (57.0 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20 Identities = 53/183 (28%), Positives = 94/183 (51%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 1093 GKGGSEKPKRPVSAMFIFSEEKRRQLQEQRPELSE--SELTRLLARMWNDLSEKKKAKYK 1266 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER P GE +++ K P +PKR + +Y + K + Sbjct: 1267 AREAALKAQSERM------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1425 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK +K Sbjct: 1426 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKK--MKF 1584 Query: 178 EKSKKK 183 + KK Sbjct: 1585 QGMPKK 1602 Score = 135 (47.5 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14 Identities = 41/145 (28%), Positives = 68/145 (46%), Frame = +1 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93 + KKC ++ K + E + + ++ R E K I K T K P+ Sbjct: 922 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1101 Query: 94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ + P LS ++ + L MWN+ + K Y+ + A Sbjct: 1102 GSEKPKRPVSAMFIFSEEKRRQLQEQRPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1281 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1282 LKAQSERMPGGEREERGKLPESPKR 1356 Score = 127 (44.7 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13 Identities = 46/158 (29%), Positives = 73/158 (46%), Frame = +1 Query: 28 KKHPD-ASVNFSEF-SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +F C +W +S E KF + + E Y KG K Sbjct: 154 ESHMDWEKVAFKDFLGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 315 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + + F E R K HP +S D+ K L + + K Y + Sbjct: 316 KLKKHPDFPKKPLTPYLRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 495 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 496 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 618 Score = 118 (41.5 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20 Identities = 23/37 (62%), Positives = 29/37 (78%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDE--DEEEDDDD 213 +SK + EEEEDEEDE+D+EEEE+E+DE D ED D Sbjct: 1909 QSKSESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGD 2019 Score = 111 (39.1 bits), Expect = 0.0071, P = 0.0071 Identities = 51/188 (27%), Positives = 89/188 (47%), Frame = +1 Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFKD-PN 92 + ++ KK W +A+++ ++E R EM+ +KK KF+ P Sbjct: 1444 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGMPK 1599 Query: 93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143 P P + + F E + H L IG +++ E + A + ++ Y Sbjct: 1600 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQY 1773 Query: 144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196 + +K +D AAY+ K K +G K+ ++ + K E E+EEDEEDE Sbjct: 1774 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDE 1953 Query: 197 EEEEDEEDEDEEEDDDDE 214 +++E+EE+ED+E D E Sbjct: 1954 DDDEEEEEEDDENGDSSE 2007 Score = 108 (38.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11 Identities = 38/151 (25%), Positives = 70/151 (46%), Frame = +1 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 340 PKKP---LTPYLRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 504 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 505 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDEIM 675 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155 D +K E+ + K K +LK+K++ Sbjct: 676 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFD 777 Score = 104 (36.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18 Identities = 17/47 (36%), Positives = 36/47 (76%), Frame = +1 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D+++ G +E S + E E+ +E+E+D+++++D+ED+DE+ED++ E Sbjct: 1996 DSSEDGGDSSESSSED-ESEDGDENEDDDDDDDDDEDDDEDEDNESE 2133 Score = 102 (35.9 bits), Expect = 0.077, P = 0.074 Identities = 22/94 (23%), Positives = 47/94 (50%), Frame = +1 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 I + K + ++ + + K+ +E+ E+D + + D + G + Sbjct: 1840 ISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDEDDDEEEEEEDD-ENGDSSEDGG 2016 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + EDE ++ DE E++D++D+D+E+DD+DE Sbjct: 2017 DSSESSSEDESEDGDENEDDDDDDDDDEDDDEDE 2118 Score = 102 (35.9 bits), Expect = 0.077, P = 0.074 Identities = 42/212 (19%), Positives = 98/212 (46%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1585 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1746 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 1747 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 1896 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179 + K + +++++ E + +E+ E D ++ D+++ ++E Sbjct: 1897 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2055 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------DDDD 213 + +++++D++D+ED++E+ED E E D D Sbjct: 2056 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2175 Score = 98 (34.5 bits), Expect = 0.22, P = 0.20 Identities = 42/211 (19%), Positives = 99/211 (46%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1585 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1746 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 1747 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 1896 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179 + K + +++++ E + +E+ E D ++ D+++ ++E Sbjct: 1897 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2055 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212 + +++++D++D+ED++E+ED E E + D D Sbjct: 2056 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2181 Score = 87 (30.6 bits), Expect = 4.0, P = 0.98 Identities = 27/115 (23%), Positives = 53/115 (46%), Frame = +1 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + K KF D K PP+++ L+C+E +K + P + + W + +K Sbjct: 757 QLKDKF-DGRPTKPPPNSYSLYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDA 921 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK--SKKKKEEEEDEEDEEDEE 197 Y KK + K+ YE ++ + + P+ ++ V+ EK + KK+ + +E Sbjct: 922 YHKKCDQKKKDYEVELLRF-LESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQE 1089 >L42570 Cricetulus griseus ribosomal transcription factor (UBF1) mRNA, Length = 2416 Plus Strand HSPs: Score = 162 (57.0 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20 Identities = 53/183 (28%), Positives = 94/183 (51%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 1204 GKGGSEKPKRPVSAMFIFSEEKRRQLQEQRPELSE--SELTRLLARMWNDLSEKKKAKYK 1377 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER P GE +++ K P +PKR + +Y + K + Sbjct: 1378 AREAALKAQSERM------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1536 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK +K Sbjct: 1537 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKK--MKF 1695 Query: 178 EKSKKK 183 + KK Sbjct: 1696 QGMPKK 1713 Score = 144 (50.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +1 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 340 PKKP---LTPYLRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 504 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 505 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 675 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 +V LG+ W+ + + + KA + +++YE+ + Y K + +++G+ K+ + Sbjct: 676 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 855 Query: 181 KKKKE 185 K +++ Sbjct: 856 KAERQ 870 Score = 135 (47.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14 Identities = 41/145 (28%), Positives = 68/145 (46%), Frame = +1 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93 + KKC ++ K + E + + ++ R E K I K T K P+ Sbjct: 1033 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1212 Query: 94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ + P LS ++ + L MWN+ + K Y+ + A Sbjct: 1213 GSEKPKRPVSAMFIFSEEKRRQLQEQRPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1392 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1393 LKAQSERMPGGEREERGKLPESPKR 1467 Score = 127 (44.7 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13 Identities = 46/158 (29%), Positives = 73/158 (46%), Frame = +1 Query: 28 KKHPD-ASVNFSEF-SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +F C +W +S E KF + + E Y KG K Sbjct: 154 ESHMDWEKVAFKDFLGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 315 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + + F E R K HP +S D+ K L + + K Y + Sbjct: 316 KLKKHPDFPKKPLTPYLRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 495 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 496 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 618 Score = 118 (41.5 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20 Identities = 23/37 (62%), Positives = 29/37 (78%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDE--DEEEDDDD 213 +SK + EEEEDEEDE+D+EEEE+E+DE D ED D Sbjct: 2020 QSKSESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGD 2130 Score = 111 (39.1 bits), Expect = 0.0072, P = 0.0071 Identities = 51/188 (27%), Positives = 89/188 (47%), Frame = +1 Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFKD-PN 92 + ++ KK W +A+++ ++E R EM+ +KK KF+ P Sbjct: 1555 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGMPK 1710 Query: 93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143 P P + + F E + H L IG +++ E + A + ++ Y Sbjct: 1711 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQY 1884 Query: 144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196 + +K +D AAY+ K K +G K+ ++ + K E E+EEDEEDE Sbjct: 1885 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDE 2064 Query: 197 EEEEDEEDEDEEEDDDDE 214 +++E+EE+ED+E D E Sbjct: 2065 DDDEEEEEEDDENGDSSE 2118 Score = 104 (36.6 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18 Identities = 17/47 (36%), Positives = 36/47 (76%), Frame = +1 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D+++ G +E S + E E+ +E+E+D+++++D+ED+DE+ED++ E Sbjct: 2107 DSSEDGGDSSESSSED-ESEDGDENEDDDDDDDDDEDDDEDEDNESE 2244 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075 Identities = 22/94 (23%), Positives = 47/94 (50%), Frame = +1 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 I + K + ++ + + K+ +E+ E+D + + D + G + Sbjct: 1951 ISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDEDDDEEEEEEDD-ENGDSSEDGG 2127 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + EDE ++ DE E++D++D+D+E+DD+DE Sbjct: 2128 DSSESSSEDESEDGDENEDDDDDDDDDEDDDEDE 2229 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075 Identities = 42/212 (19%), Positives = 98/212 (46%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1696 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1857 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 1858 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2007 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179 + K + +++++ E + +E+ E D ++ D+++ ++E Sbjct: 2008 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2166 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------DDDD 213 + +++++D++D+ED++E+ED E E D D Sbjct: 2167 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2286 Score = 98 (34.5 bits), Expect = 0.23, P = 0.20 Identities = 42/211 (19%), Positives = 99/211 (46%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1696 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1857 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 1858 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2007 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179 + K + +++++ E + +E+ E D ++ D+++ ++E Sbjct: 2008 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2166 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212 + +++++D++D+ED++E+ED E E + D D Sbjct: 2167 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2292 Score = 94 (33.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09 Identities = 45/207 (21%), Positives = 93/207 (44%), Frame = +1 Query: 2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51 K D P+KP K ++ ++ + K PDA+ +S+ S K +W Sbjct: 580 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHK 750 Query: 52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102 + +++ ++E++ + D + E+ T + + K KF D K PP+++ Sbjct: 751 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 924 Query: 103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162 L+C+E +K + P + + W + +K Y KK + K+ YE ++ + Sbjct: 925 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1089 Query: 163 AKGKPDAAKKGVVKAEK--SKKKKEEEEDEEDEEDEE 197 + P+ ++ V+ EK + KK+ + +E Sbjct: 1090 LESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQE 1200 >D14315 delta-crystallin enhancer binding protein, partial sequence. Length = 1320 Plus Strand HSPs: Score = 248 (87.3 bits), Expect = 9.9e-20, P = 9.9e-20 Identities = 60/167 (35%), Positives = 96/167 (57%), Frame = +3 Query: 32 DASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADK--ARYEREMKTYIPPKGETK-KK 87 D S N E +E + + SA D + +K A+ + +K P K + + KK Sbjct: 204 DESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAKKAKIVKDRKPRKKQVESKK 383 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 384 GKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKA 563 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 K YEK + Y K +++K E+SKKKK+++E + + E++ Sbjct: 564 EDAKRDYEKAMKEYSVGNKSESSKM-----ERSKKKKKKQEKQMKGKGEKK 701 Score = 147 (51.7 bits), Expect = 1.6e-07, P = 1.6e-07 Identities = 55/172 (31%), Positives = 83/172 (48%), Frame = +3 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 381 KGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISI--TDLSKKAGELWKAMSKEKKEEWD 554 Query: 61 DMAKADKARYEREMKTY-IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 A+ K YE+ MK Y + K E+ K + K+ E + K KGE G Sbjct: 555 RKAEDAKRDYEKAMKEYSVGNKSESSKMERSKKKKKK---------QEKQMKGKGEKKGA 707 Query: 120 ------SIGDVAKKLGEMWNN---TAADDKQPYEKKAAKLKEKYEKDIAAYRAKG--KPD 168 S AK + E + + ++D+ E KE+ E+ A R K P Sbjct: 708 ASKSSSSTKSSAKTMSESFKSKEFVSSDESSSAESN----KEQEEEHRGANRPKPHKSPQ 875 Query: 169 AAKKG 173 A G Sbjct: 876 QAPSG 890 >X76774 P.sativum mRNA for HMG1 protein Length = 807 Plus Strand HSPs: Score = 245 (86.2 bits), Expect = 1.1e-19, P = 1.1e-19 Identities = 55/135 (40%), Positives = 75/135 (55%), Frame = +3 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK-GEHPGLSIGDVAKKLGEMWNNTAA 137 P KG K+ KDPN PKRPPSAFF+F ++R + K G ++ V K G W + Sbjct: 117 PAKG---KEPKDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTE 287 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +K PY KA K K +YEK + +Y K +AE +EEEE E+ E + Sbjct: 288 AEKAPYAAKAEKRKAEYEKSMKSYNKK-----------QAEGPAAVEEEEESEKSESEVH 434 Query: 198 EEEDEEDEDEEEDDDD 213 +E D+E+E EEEDDD+ Sbjct: 435 DENDDEEESEEEDDDE 482 Score = 239 (84.1 bits), Expect = 4.8e-19, P = 4.8e-19 Identities = 56/136 (41%), Positives = 75/136 (55%), Frame = +3 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK-GEHPGLSIGDVAKKLGEMWNNTAA 137 P KG K+ KDPN PKRPPSAFF+F ++R + K G ++ V K G W + Sbjct: 117 PAKG---KEPKDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTE 287 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +K PY KA K K +YEK + +Y K +AE +EEEE E+ E + Sbjct: 288 AEKAPYAAKAEKRKAEYEKSMKSYNKK-----------QAEGPAAVEEEEESEKSESEVH 434 Query: 198 EEEDEEDEDEEEDDDDE 214 +E D+E+E EEEDDD E Sbjct: 435 DENDDEEESEEEDDD-E 482 Score = 122 (42.9 bits), Expect = 0.00017, P = 0.00017 Identities = 26/80 (32%), Positives = 42/80 (52%), Frame = +3 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R++ KK + D S K +WK+M+ EK + A Sbjct: 141 DPNKPKRPPSAFFVFMEDFRKQFKKGNADNKA-VSAVGKAAGAKWKSMTEAEKAPYAAKA 317 Query: 64 KADKARYEREMKTYIPPKGE 83 + KA YE+ MK+Y + E Sbjct: 318 EKRKAEYEKSMKSYNKKQAE 377 >L28094 Barley mRNA sequence. Length = 942 Plus Strand HSPs: Score = 244 (85.9 bits), Expect = 1.2e-19, P = 1.2e-19 Identities = 51/136 (37%), Positives = 82/136 (60%), Frame = +3 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAA 137 PP+G +++ + P +P+ P AFF+ E+R + K ++P S+ V K GE W + + Sbjct: 177 PPRGRRERQARTPTSPRGTP-AFFVSMGEFREEFKQKNPKNKSVAPVGKAAGERWKSLSE 353 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +K P+ KA KLK +Y K IAAY KG+ AA K +K+ +EE+E+E D+ E Sbjct: 354 PEKAPFVAKANKLKGEYNKAIAAYN-KGESTAAAP---KKAAAKEVEEEDEEESDKSKSE 521 Query: 198 EEEDEEDEDEEEDDDDE 214 +D++DE +ED+DD+ Sbjct: 522 INDDDDDEGSDEDEDDD 572 Score = 243 (85.5 bits), Expect = 1.5e-19, P = 1.5e-19 Identities = 53/135 (39%), Positives = 83/135 (61%), Frame = +3 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAA 137 PP+G +++ + P +P+ P AFF+ E+R + K ++P S+ V K GE W + + Sbjct: 177 PPRGRRERQARTPTSPRGTP-AFFVSMGEFREEFKQKNPKNKSVAPVGKAAGERWKSLSE 353 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +K P+ KA KLK +Y K IAAY KG+ AA K +K+ +EE+E+E D+ E Sbjct: 354 PEKAPFVAKANKLKGEYNKAIAAYN-KGESTAAAP---KKAAAKEVEEEDEEESDKSKSE 521 Query: 198 EEEDEEDE--DEEEDDDD 213 +D++DE DE+EDDD+ Sbjct: 522 INDDDDDEGSDEDEDDDE 575 Score = 104 (36.6 bits), Expect = 0.031, P = 0.031 Identities = 30/80 (37%), Positives = 41/80 (51%), Frame = +3 Query: 5 PKKPRGKMSSYAFFVQT--CREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 P PRG + AFFV REE K+K+P + + + K ERWK++S EK F Sbjct: 213 PTSPRG---TPAFFVSMGEFREEFKQKNPK-NKSVAPVGKAAGERWKSLSEPEKAPFVAK 380 Query: 63 AKADKARYEREMKTYIPPKGET 84 A K Y + + Y KGE+ Sbjct: 381 ANKLKGEYNKAIAAY--NKGES 440 >I14731 Sequence 10 from patent US 5451670. Length = 2188 Plus Strand HSPs: Score = 97 (34.1 bits), Expect = 0.29, P = 0.25 Identities = 46/171 (26%), Positives = 86/171 (50%), Frame = +1 Query: 45 SERWKTMSAKEKGKFEDMA----KADK--ARYEREMKTYIPPKGETKKKFK--DPNAPKR 96 +E K ++AK + E+M K DK A+ E + K K E K F+ D NA K+ Sbjct: 991 AEDLKKLAAKLEKHSEEMGTRDLKLDKLAAKLEHQTKELEKQKSELKSHFQYMDFNAGKQ 1170 Query: 97 PPSAFFLFCSEYR----PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 152 L Y +K E P + +G AK+ E ++ K+ +E+ + KE Sbjct: 1171 KKMVTKLE-EHYEWMVTRNVKLEIPAIKVGQQAKESEEQ----KSELKEHHEEMGQQAKE 1335 Query: 153 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 E+ +++ K + G +A++S+++K E ++ +E ++ +E EE + E ++ Sbjct: 1336 SEEQ-----KSELKEHHEEMGQ-QAKESEEQKSELKEHHEEMGQQAKESEEQKSELKEHH 1497 Query: 213 DE 214 +E Sbjct: 1498 EE 1503 Score = 89 (31.3 bits), Expect = 2.3, P = 0.90 Identities = 51/192 (26%), Positives = 91/192 (47%), Frame = +1 Query: 38 SEFSKKCSERWKTMSAKEKGKFEDMAKADK--ARYEREMKTYIPPKGETKKKFK--DPNA 93 +E KK + + + S +E G D+ K DK A+ E + K K E K F+ D NA Sbjct: 991 AEDLKKLAAKLEKHS-EEMGT-RDL-KLDKLAAKLEHQTKELEKQKSELKSHFQYMDFNA 1161 Query: 94 PKRPPSAFFLFCSEYR----PKIKGEHPGLSIGDVAKK-------LGEMWNNTAADDKQP 142 K+ L Y +K E P + +G AK+ L E K+ Sbjct: 1162 GKQKKMVTKLE-EHYEWMVTRNVKLEIPAIKVGQQAKESEEQKSELKEHHEEMGQQAKES 1338 Query: 143 YEKKAAKLKEKYE------KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 E+K+ +LKE +E K+ +++ K + G +A++S+++K E ++ +E + Sbjct: 1339 EEQKS-ELKEHHEEMGQQAKESEEQKSELKEHHEEMGQ-QAKESEEQKSELKEHHEEMGQ 1512 Query: 197 EEEEDEEDEDEEEDDDDE 214 + +E EE + E ++ +E Sbjct: 1513 QAKESEEQKSELKEHHEE 1566 Minus Strand HSPs: Score = 249 (87.7 bits), Expect = 1.8e-19, P = 1.8e-19 Identities = 46/64 (71%), Positives = 59/64 (92%), Frame = -2 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +++ EKDIAAYRAKGK DA KK V KAEKSKKKKEEEEDE+++E++EE+E+EE+E+EE+D Sbjct: 264 RKETEKDIAAYRAKGKVDAGKKVVAKAEKSKKKKEEEEDEDEDEEDEEDEEEEEEEEEDD 85 Query: 211 DDDE 214 DDDE Sbjct: 84 DDDE 73 >AJ002391 Solanum tuberosum mRNA for high mobility group protein Length = 734 Plus Strand HSPs: Score = 241 (84.8 bits), Expect = 3.2e-19, P = 3.2e-19 Identities = 55/140 (39%), Positives = 82/140 (58%), Frame = +3 Query: 64 KADKARYEREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118 K K++ + + K + K KK K DPN PKRPPSAFF+F E+R K +HP Sbjct: 96 KGAKSKAKADTKLGVRKKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 275 Query: 119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178 S+ V K G+ W + ++K PY+ KA K K +Y+K++ AY K AA G E Sbjct: 276 KSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKL---AA--GDADDE 440 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEE 203 +S K K E D+++++D E+ED++ Sbjct: 441 ESDKSKSEVHDDDEDDDGSEQEDDD 515 Score = 228 (80.3 bits), Expect = 7.6e-18, P = 7.6e-18 Identities = 60/149 (40%), Positives = 82/149 (55%), Frame = +3 Query: 64 KADKARYEREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118 K K++ + + K + K KK K DPN PKRPPSAFF+F E+R K +HP Sbjct: 96 KGAKSKAKADTKLGVRKKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 275 Query: 119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178 S+ V K G+ W + ++K PY+ KA K K +Y+K++ AY K AA G E Sbjct: 276 KSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKL---AA--GDADDE 440 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 +S K K E D+ DE+D D E+EDDD Sbjct: 441 ESDKSKSEVHDD-DEDD--------DGSEQEDDD 515 Score = 124 (43.7 bits), Expect = 8.1e-05, P = 8.1e-05 Identities = 23/74 (31%), Positives = 44/74 (59%), Frame = +3 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R+ +K+KHP+ + + + K ++WK +S +EK ++ A Sbjct: 186 DPNKPKRPPSAFFVFMEEFRKTYKEKHPN-NKSVAVVGKAGGDKWKQLSDEEKAPYQAKA 362 Query: 64 KADKARYEREMKTY 77 + KA Y++ M Y Sbjct: 363 EKRKAEYQKNMDAY 404 Score = 87 (30.6 bits), Expect = 2.4, P = 0.91 Identities = 21/68 (30%), Positives = 38/68 (55%), Frame = +3 Query: 149 KLKEKYEKDIAAYRAKGKPDAAK--KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206 K K+ +++ A Y+AK + A+ K + K + +++E D+ E +D+ED+D Sbjct: 312 KWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAGDADDEESDKSKSEVHDDDEDDD 491 Query: 207 --EEEDDD 212 E+EDDD Sbjct: 492 GSEQEDDD 515 >S50213 HMG1-related DNA-binding protein [mice, mRNA, 2569 nt]. Length = 2569 Plus Strand HSPs: Score = 247 (86.9 bits), Expect = 3.3e-19, P = 3.3e-19 Identities = 56/179 (31%), Positives = 95/179 (53%), Frame = +2 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +E+ K E + +A A+ +R+ + K KK Sbjct: 1532 EEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMAK-DRKSRR----KSSEAKK 1696 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1697 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1876 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206 + +YEK + Y G+ D++K+ K +K K K E++ + + D Sbjct: 1877 EDARREYEKAMKEYEG-GRGDSSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSD 2050 Score = 224 (78.9 bits), Expect = 9.6e-17, P = 9.6e-17 Identities = 62/192 (32%), Positives = 98/192 (51%), Frame = +2 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +E+ K E + +A A+ +R+ + K KK Sbjct: 1532 EEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMAK-DRKSRR----KSSEAKK 1696 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1697 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1876 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAK------KGVVKAEKSKKK--------KEEEEDEEDE 193 + +YEK + Y G+ D++K K VKA+ KK K D Sbjct: 1877 EDARREYEKAMKEYEG-GRGDSSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSDS 2053 Query: 194 EDEEE--EEDEEDEDEEE 209 +E DE E + Sbjct: 2054 FKSKEFVSSDESSSGENK 2107 Score = 151 (53.2 bits), Expect = 5.5e-08, P = 5.5e-08 Identities = 33/94 (35%), Positives = 53/94 (56%), Frame = +2 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 1694 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1867 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 A+ + YE+ MK Y +G++ K+ K K Sbjct: 1868 RKAEDARREYEKAMKEYEGGRGDSSKRDKSKKKKK 1972 >M61725 Rat transcription factor UBF2 mRNA. Length = 2452 Plus Strand HSPs: Score = 190 (66.9 bits), Expect = 4.1e-13, P = 4.1e-13 Identities = 53/181 (29%), Positives = 87/181 (48%), Frame = +3 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 1710 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1889 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164 E GE L + + ++G W + K+ Y+K A + + +Y+ + + Sbjct: 1890 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 2063 Query: 165 GKP-DAA---------KKGVVKAE----KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 P D A +K + K KS + + + E +E+D+EE++D++DE+EEED Sbjct: 2064 LSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDEEEEED 2243 Query: 211 DDD 213 D++ Sbjct: 2244 DEN 2252 Score = 166 (58.4 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19 Identities = 52/181 (28%), Positives = 92/181 (50%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 1353 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1526 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER+ P GE + + K P +PKR + +Y + K + Sbjct: 1527 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1685 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK + Sbjct: 1686 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1850 Query: 178 EKSK 181 E K Sbjct: 1851 EPKK 1862 Score = 140 (49.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13 Identities = 42/145 (28%), Positives = 68/145 (46%), Frame = +3 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93 + KKC ++ K + E + + ++ R E K I K T K P+ Sbjct: 1182 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1361 Query: 94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ E P LS ++ + L MWN+ + K Y+ + A Sbjct: 1362 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1541 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1542 LKAQSERKPGGEREDRGKLPESPKR 1616 Score = 137 (48.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3 Query: 28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +FS C +W +S E KF + + E Y KG K Sbjct: 414 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 575 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + +F F E R K HP +S D+ K L + + K Y + Sbjct: 576 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 755 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 756 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 878 Score = 109 (38.4 bits), Expect = 0.012, P = 0.012 Identities = 41/168 (24%), Positives = 83/168 (49%), Frame = +3 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106 RW+ +S +K ++ +A+ + +Y+ + ++ K P + +A+ + S Sbjct: 1962 RWQRISQSQKEHYKKLAEEQQRQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2105 Query: 107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 R K++G +P S + K ++ DD E E+ E D Sbjct: 2106 NKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDE-------EEEEDD-----E 2249 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 G D+++ G +E S + E E+ +E+E+D+++E+D+ED+DE+ED++ E Sbjct: 2250 NG--DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2393 Score = 107 (37.7 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19 Identities = 18/47 (38%), Positives = 36/47 (76%), Frame = +3 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D+++ G +E S + E E+ +E+E+D+++E+D+ED+DE+ED++ E Sbjct: 2256 DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2393 Score = 107 (37.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09 Identities = 38/151 (25%), Positives = 70/151 (46%), Frame = +3 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 600 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 764 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 765 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDEIM 935 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155 D +K E+ + K K +LK+K++ Sbjct: 936 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFD 1037 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021 Identities = 42/213 (19%), Positives = 96/213 (45%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1845 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2006 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 2007 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2156 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K ++ DD E++ +E E ++ +++ + ++E Sbjct: 2157 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2318 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214 + +++++DE+D+ED++E+ED E E D + Sbjct: 2319 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2435 Score = 105 (37.0 bits), Expect = 0.035, P = 0.035 Identities = 42/213 (19%), Positives = 97/213 (45%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1845 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2006 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 2007 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2156 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K ++ DD E++ +E E ++ +++ + ++E Sbjct: 2157 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2318 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214 + +++++DE+D+ED++E+ED E E + D + Sbjct: 2319 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2441 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075 Identities = 47/188 (25%), Positives = 90/188 (47%), Frame = +3 Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFK-DPN 92 + ++ KK W +A+++ ++E R EM+ +KK KF+ +P Sbjct: 1704 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGEPK 1859 Query: 93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143 P P + + F E + H L IG +++ E + A + ++ Y Sbjct: 1860 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQY 2033 Query: 144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196 + +K +D AAY+ K K +G K+ ++ + K E E+++DEED+ Sbjct: 2034 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDD 2213 Query: 197 EEEEDEEDEDEEEDDDDE 214 +++++EE+ED+E D E Sbjct: 2214 DDDDEEEEEDDENGDSSE 2267 Score = 80 (28.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16 Identities = 12/28 (42%), Positives = 20/28 (71%), Frame = +3 Query: 187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E EDE E+ DE ++D++++DDDE Sbjct: 2277 DSSESSSEDESEDGDENEDDDDDEDDDE 2360 Score = 74 (26.0 bits), Expect = 0.0090, Sum P(2) = 0.0090 Identities = 45/200 (22%), Positives = 80/200 (40%), Frame = +3 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G P KP +SY+ + C E V +E CS++WK +S KEK + Sbjct: 1038 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1193 Query: 63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116 K YE E+ ++ P+ E ++ + K+ S S+ K E Sbjct: 1194 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKGGSEK 1373 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175 P + + E + + E + +L + D++ + AK K A++ + Sbjct: 1374 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1544 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDE 202 KA+ +K E ED + + +E Sbjct: 1545 KAQSERKPGGEREDRGKLPESPKRAEE 1625 >M61726 Rat transcription factor UBF1 mRNA. Length = 2563 Plus Strand HSPs: Score = 190 (66.9 bits), Expect = 4.2e-13, P = 4.2e-13 Identities = 53/181 (29%), Positives = 87/181 (48%), Frame = +3 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 1821 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 2000 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164 E GE L + + ++G W + K+ Y+K A + + +Y+ + + Sbjct: 2001 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 2174 Query: 165 GKP-DAA---------KKGVVKAE----KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 P D A +K + K KS + + + E +E+D+EE++D++DE+EEED Sbjct: 2175 LSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDEEEEED 2354 Query: 211 DDD 213 D++ Sbjct: 2355 DEN 2363 Score = 166 (58.4 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19 Identities = 52/181 (28%), Positives = 92/181 (50%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 1464 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1637 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER+ P GE + + K P +PKR + +Y + K + Sbjct: 1638 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1796 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK + Sbjct: 1797 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1961 Query: 178 EKSK 181 E K Sbjct: 1962 EPKK 1973 Score = 143 (50.3 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +3 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 600 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 764 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 765 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 935 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 +V LG+ W+ + + + KA + +++YE+ + Y K + +++G+ K+ + Sbjct: 936 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 1115 Query: 181 KKKKE 185 K +++ Sbjct: 1116 KAERQ 1130 Score = 140 (49.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13 Identities = 42/145 (28%), Positives = 68/145 (46%), Frame = +3 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93 + KKC ++ K + E + + ++ R E K I K T K P+ Sbjct: 1293 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1472 Query: 94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ E P LS ++ + L MWN+ + K Y+ + A Sbjct: 1473 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1652 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1653 LKAQSERKPGGEREDRGKLPESPKR 1727 Score = 137 (48.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3 Query: 28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +FS C +W +S E KF + + E Y KG K Sbjct: 414 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 575 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + +F F E R K HP +S D+ K L + + K Y + Sbjct: 576 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 755 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 756 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 878 Score = 109 (38.4 bits), Expect = 0.012, P = 0.012 Identities = 41/168 (24%), Positives = 83/168 (49%), Frame = +3 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106 RW+ +S +K ++ +A+ + +Y+ + ++ K P + +A+ + S Sbjct: 2073 RWQRISQSQKEHYKKLAEEQQRQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2216 Query: 107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 R K++G +P S + K ++ DD E E+ E D Sbjct: 2217 NKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDE-------EEEEDD-----E 2360 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 G D+++ G +E S + E E+ +E+E+D+++E+D+ED+DE+ED++ E Sbjct: 2361 NG--DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2504 Score = 107 (37.7 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19 Identities = 18/47 (38%), Positives = 36/47 (76%), Frame = +3 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D+++ G +E S + E E+ +E+E+D+++E+D+ED+DE+ED++ E Sbjct: 2367 DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2504 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021 Identities = 42/213 (19%), Positives = 96/213 (45%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1956 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2117 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 2118 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2267 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K ++ DD E++ +E E ++ +++ + ++E Sbjct: 2268 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2429 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214 + +++++DE+D+ED++E+ED E E D + Sbjct: 2430 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2546 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035 Identities = 42/213 (19%), Positives = 97/213 (45%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1956 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2117 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 2118 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2267 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K ++ DD E++ +E E ++ +++ + ++E Sbjct: 2268 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2429 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214 + +++++DE+D+ED++E+ED E E + D + Sbjct: 2430 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2552 Score = 102 (35.9 bits), Expect = 0.079, P = 0.076 Identities = 47/188 (25%), Positives = 90/188 (47%), Frame = +3 Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFK-DPN 92 + ++ KK W +A+++ ++E R EM+ +KK KF+ +P Sbjct: 1815 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGEPK 1970 Query: 93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143 P P + + F E + H L IG +++ E + A + ++ Y Sbjct: 1971 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQY 2144 Query: 144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196 + +K +D AAY+ K K +G K+ ++ + K E E+++DEED+ Sbjct: 2145 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDD 2324 Query: 197 EEEEDEEDEDEEEDDDDE 214 +++++EE+ED+E D E Sbjct: 2325 DDDDEEEEEDDENGDSSE 2378 Score = 80 (28.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16 Identities = 12/28 (42%), Positives = 20/28 (71%), Frame = +3 Query: 187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E EDE E+ DE ++D++++DDDE Sbjct: 2388 DSSESSSEDESEDGDENEDDDDDEDDDE 2471 Score = 74 (26.0 bits), Expect = 0.0095, Sum P(2) = 0.0094 Identities = 45/200 (22%), Positives = 80/200 (40%), Frame = +3 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G P KP +SY+ + C E V +E CS++WK +S KEK + Sbjct: 1149 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1304 Query: 63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116 K YE E+ ++ P+ E ++ + K+ S S+ K E Sbjct: 1305 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKGGSEK 1484 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175 P + + E + + E + +L + D++ + AK K A++ + Sbjct: 1485 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1655 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDE 202 KA+ +K E ED + + +E Sbjct: 1656 KAQSERKPGGEREDRGKLPESPKRAEE 1736 >X80467 M.musculus HMG1-R-87 gene Length = 190 Plus Strand HSPs: Score = 139 (48.9 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19 Identities = 25/27 (92%), Positives = 27/27 (100%), Frame = +2 Query: 36 NFSEFSKKCSERWKTMSAKEKGKFEDM 62 NFSEFSKKCSERW+TM+AKEKGKFEDM Sbjct: 107 NFSEFSKKCSERWETMTAKEKGKFEDM 187 Score = 119 (41.9 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19 Identities = 25/33 (75%), Positives = 26/33 (78%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDA 33 GK DPKK RGKMSSYAFF+QT HKKKH DA Sbjct: 4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHLDA 102 Score = 41 (14.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08 Identities = 7/25 (28%), Positives = 12/25 (48%), Frame = +2 Query: 120 SIGDVAKKLGEMWNNTAADDKQPYE 144 + + +KK E W A +K +E Sbjct: 107 NFSEFSKKCSERWETMTAKEKGKFE 181 >X60831 Mouse ubf gene for transcription factor UBF Length = 3031 Plus Strand HSPs: Score = 197 (69.3 bits), Expect = 7.9e-14, P = 7.9e-14 Identities = 54/182 (29%), Positives = 89/182 (48%), Frame = +3 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 1605 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1784 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE--------- 155 E GE L + + ++G W + K+ Y+K A + + +Y+ Sbjct: 1785 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 1958 Query: 156 ---KDIAAYR---AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 +D AAY+ + + + K + S+ + + + E+++DEEEE+DEE+E+EEE Sbjct: 1959 LSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEEEDDEEEEEEEE 2138 Query: 210 DDDD 213 DD++ Sbjct: 2139 DDEN 2150 Score = 163 (57.4 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19 Identities = 51/181 (28%), Positives = 92/181 (50%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W ++ K+K K++ Sbjct: 1248 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLTEKKKAKYK 1421 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER+ P GE + + K P +PKR + +Y + K + Sbjct: 1422 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1580 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK + Sbjct: 1581 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1745 Query: 178 EKSK 181 E K Sbjct: 1746 EPKK 1757 Score = 140 (49.3 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14 Identities = 43/181 (23%), Positives = 89/181 (49%), Frame = +3 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 384 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 548 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 549 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 719 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 +V LG+ W+ + + KA + +++YE+ + Y K + +++G+ K+ + Sbjct: 720 KEVKDSLGKQWSQLSDKKTLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 899 Query: 181 KKKKE 185 K +++ Sbjct: 900 KAERQ 914 Score = 139 (48.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +3 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93 + KKC ++ K + E + + ++ R E K I K T K P+ Sbjct: 1077 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1256 Query: 94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ E P LS ++ + L MWN+ K Y+ + A Sbjct: 1257 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLTEKKKAKYKAREAA 1436 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1437 LKAQSERKPGGEREDRGKLPESPKR 1511 Score = 137 (48.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3 Query: 28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +FS C +W +S E KF + + E Y KG K Sbjct: 198 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 359 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + +F F E R K HP +S D+ K L + + K Y + Sbjct: 360 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 539 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 540 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 662 Score = 114 (40.1 bits), Expect = 0.0034, P = 0.0034 Identities = 42/213 (19%), Positives = 93/213 (43%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1740 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1901 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR + K++G +P S Sbjct: 1902 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2051 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD + E + +E+ + + G + ++E Sbjct: 2052 RTTLQSK-----SESEEDDDEEEEDDEEEEEEEEDDENGDSSEDGGDSSESSSEDESEDG 2216 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214 + ++++DE+DE+D++E+ED E E D + Sbjct: 2217 DENDDDDDDEDDEDDDDEDEDNESEGSSSSSSSSGDSSD 2333 Score = 109 (38.4 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19 Identities = 20/36 (55%), Positives = 29/36 (80%), Frame = +3 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +SK + EE++DEE+E+DEEEEE+EED DE D ++ Sbjct: 2064 QSKSESEEDDDEEEEDDEEEEEEEED-DENGDSSED 2168 Score = 108 (38.0 bits), Expect = 0.017, P = 0.017 Identities = 23/82 (28%), Positives = 46/82 (56%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 + T K E+ + +E E++ D+++ G +E S + + E+ DE D Sbjct: 2049 SRTTLQSKSESEEDDDEEEEDDEEEEEEEEDDENGDSSEDGGDSSESSSEDESEDGDEND 2228 Query: 193 EEDEEEEEDEEDEDEEEDDDDE 214 ++D++E+ DE+D+DE+ED++ E Sbjct: 2229 DDDDDED-DEDDDDEDEDNESE 2291 Score = 107 (37.7 bits), Expect = 0.022, P = 0.021 Identities = 29/99 (29%), Positives = 54/99 (54%), Frame = +3 Query: 124 VAKKLGEMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKA 177 +++ E + A + ++ Y+ +K +D AAY+ K K +G K+ Sbjct: 1869 ISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKS 2048 Query: 178 EKS--KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ + K E EED+++EE+++EEE+EE+ED+E D E Sbjct: 2049 SRTTLQSKSESEEDDDEEEEDDEEEEEEEEDDENGDSSE 2165 Score = 96 (33.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08 Identities = 45/207 (21%), Positives = 94/207 (45%), Frame = +3 Query: 2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51 K D P+KP K ++ ++ + K PDA+ +S+ S K + +W Sbjct: 624 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKTLKWIHK 794 Query: 52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102 + +++ ++E++ + D + E+ T + + K KF D K PP+++ Sbjct: 795 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 968 Query: 103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162 L+C+E +K + P + + W + +K Y KK + K+ YE ++ + Sbjct: 969 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1133 Query: 163 AKGKPDAAKKGVVKAEK--SKKKKEEEEDEEDEEDEE 197 + P+ ++ V+ EK + KK+ + +E Sbjct: 1134 LESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQE 1244 Score = 95 (33.4 bits), Expect = 0.51, P = 0.40 Identities = 37/202 (18%), Positives = 85/202 (42%), Frame = +3 Query: 12 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 71 M+ Y F Q + H + E + RW+ +S +K ++ +A+ + +Y+ Sbjct: 1764 MNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYK 1931 Query: 72 REMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGE 130 + ++ + + +K+ + KR + K++G +P S + K Sbjct: 1932 VHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSSRTTLQSK--- 2072 Query: 131 MWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDE 190 + + DD + E + +E+ + + G + ++E + ++++DE Sbjct: 2073 --SESEEDDDEEEEDDEEEEEEEEDDENGDSSEDGGDSSESSSEDESEDGDENDDDDDDE 2246 Query: 191 EDEEDEEEEEDEEDEDEEEDDD---D 213 +DE+D++E+ED E E D Sbjct: 2247 DDEDDDDEDEDNESEGSSSSSSSSGD 2324 >X56687 H.sapiens mRNA for autoantigen NOR-90 Length = 2489 Plus Strand HSPs: Score = 198 (69.7 bits), Expect = 5.7e-14, P = 5.7e-14 Identities = 57/180 (31%), Positives = 85/180 (47%), Frame = +3 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 1623 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1802 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164 E GE L + + ++G W + K+ Y+K A + +++Y+ + + Sbjct: 1803 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 1976 Query: 165 GKPD---AAKKGVVKAEKSKKK------KEE----EEDEEDEEDEEEEEDEEDEDEEEDD 211 P A K+ + KS K K + E EED+EE+ED+EDEDEEE+D Sbjct: 1977 LSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 2156 Query: 212 DD 213 D+ Sbjct: 2157 DE 2162 Score = 168 (59.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18 Identities = 52/181 (28%), Positives = 93/181 (51%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 1266 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1439 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER+ P GE +++ K P +PKR + +Y + K + Sbjct: 1440 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1598 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK + Sbjct: 1599 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1763 Query: 178 EKSK 181 E K Sbjct: 1764 EPKK 1775 Score = 139 (48.9 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +3 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDP------- 91 + KKC ++ K + E + + ++ R E K I K T K P Sbjct: 1095 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKG 1274 Query: 92 --NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ E P LS ++ + L MWN+ + K Y+ + A Sbjct: 1275 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1454 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1455 LKAQSERKPGGEREERGKLPESPKR 1529 Score = 137 (48.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3 Query: 28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +FS C +W +S E KF + + E Y KG K Sbjct: 327 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 488 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + +F F E R K HP +S D+ K L + + K Y + Sbjct: 489 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 668 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 669 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 791 Score = 116 (40.8 bits), Expect = 0.0019, P = 0.0019 Identities = 42/168 (25%), Positives = 86/168 (51%), Frame = +3 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106 RW+ +S +K ++ +A+ + +Y+ + ++ K P + +A+ + S Sbjct: 1875 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2018 Query: 107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 R K++G +P S + K + + DD++ + + E+ E D Sbjct: 2019 NKRKSMTKLRGPNPKSSRTTLQSK-----SESEEDDEEDEDDEDED--EEEEDD-----E 2162 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 G D+++ G +E S + E E+ +E+EED+E+E+D+ED+DE+ED++ E Sbjct: 2163 NG--DSSEDGGDSSESSSED-ESEDGDENEEDDEDEDDDEDDDEDEDNESE 2306 Score = 115 (40.5 bits), Expect = 0.0025, P = 0.0025 Identities = 44/213 (20%), Positives = 94/213 (44%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1758 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1919 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1920 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2069 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2070 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2231 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214 + +E++EDE+D+ED++E+ED E E D + Sbjct: 2232 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2348 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042 Identities = 45/211 (21%), Positives = 95/211 (45%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1758 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1919 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1920 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2069 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2070 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2231 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212 + +E++EDE+D+ED++E+ED E E + D D Sbjct: 2232 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2354 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042 Identities = 44/213 (20%), Positives = 95/213 (44%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1758 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1919 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1920 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2069 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2070 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2231 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214 + +E++EDE+D+ED++E+ED E E + D + Sbjct: 2232 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2354 Score = 107 (37.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08 Identities = 38/151 (25%), Positives = 70/151 (46%), Frame = +3 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 513 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 677 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 678 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDEIM 848 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155 D +K E+ + K K +LK+K++ Sbjct: 849 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFD 950 Score = 100 (35.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18 Identities = 16/38 (42%), Positives = 26/38 (68%), Frame = +3 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +E E ++E E+ +E EED+EDED++EDDD++ Sbjct: 2175 SEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDED 2288 Score = 86 (30.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17 Identities = 14/28 (50%), Positives = 20/28 (71%), Frame = +3 Query: 187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E EDE E+ DE +ED+E++DDDE Sbjct: 2190 DSSESSSEDESEDGDENEEDDEDEDDDE 2273 Score = 86 (30.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06 Identities = 24/97 (24%), Positives = 46/97 (47%), Frame = +3 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + K KF D K PP+++ L+C+E +K + P + + W + +K Sbjct: 930 QLKDKF-DGRPTKPPPNSYSLYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDA 1094 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179 Y KK + K+ YE ++ + + P+ ++ V+ EK Sbjct: 1095 YHKKCDQKKKDYEVELLRF-LESLPEEEQQRVLGEEK 1202 Score = 71 (25.0 bits), Expect = 0.0038, Sum P(2) = 0.0038 Identities = 46/201 (22%), Positives = 83/201 (41%), Frame = +3 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G P KP +SY+ + C E V +E CS++WK +S KEK + Sbjct: 951 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1106 Query: 63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116 K YE E+ ++ P+ E ++ + K+ S ++ K E Sbjct: 1107 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEK 1286 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175 P + + E + + E + +L + D++ + AK K A++ + Sbjct: 1287 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1457 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 KA+ S++K E +E + E + EE Sbjct: 1458 KAQ-SERKPGGEREERGKLPESPKRAEE 1538 >X53390 Human mRNA for upstream binding factor (hUBF) Length = 3097 Plus Strand HSPs: Score = 198 (69.7 bits), Expect = 6.2e-14, P = 6.2e-14 Identities = 57/180 (31%), Positives = 85/180 (47%), Frame = +1 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 1702 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1881 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164 E GE L + + ++G W + K+ Y+K A + +++Y+ + + Sbjct: 1882 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 2055 Query: 165 GKPD---AAKKGVVKAEKSKKK------KEE----EEDEEDEEDEEEEEDEEDEDEEEDD 211 P A K+ + KS K K + E EED+EE+ED+EDEDEEE+D Sbjct: 2056 LSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 2235 Query: 212 DD 213 D+ Sbjct: 2236 DE 2241 Score = 168 (59.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18 Identities = 52/181 (28%), Positives = 93/181 (51%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 1345 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1518 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER+ P GE +++ K P +PKR + +Y + K + Sbjct: 1519 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1677 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK + Sbjct: 1678 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1842 Query: 178 EKSK 181 E K Sbjct: 1843 EPKK 1854 Score = 143 (50.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +1 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 481 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 645 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 646 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 816 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 +V LG+ W+ + + + KA + +++YE+ + Y K + +++G+ K+ + Sbjct: 817 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 996 Query: 181 KKKKE 185 K +++ Sbjct: 997 KAERQ 1011 Score = 139 (48.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +1 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDP------- 91 + KKC ++ K + E + + ++ R E K I K T K P Sbjct: 1174 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKG 1353 Query: 92 --NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ E P LS ++ + L MWN+ + K Y+ + A Sbjct: 1354 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1533 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1534 LKAQSERKPGGEREERGKLPESPKR 1608 Score = 137 (48.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +1 Query: 28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +FS C +W +S E KF + + E Y KG K Sbjct: 295 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 456 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + +F F E R K HP +S D+ K L + + K Y + Sbjct: 457 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 636 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 637 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 759 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020 Identities = 42/168 (25%), Positives = 86/168 (51%), Frame = +1 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106 RW+ +S +K ++ +A+ + +Y+ + ++ K P + +A+ + S Sbjct: 1954 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2097 Query: 107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 R K++G +P S + K + + DD++ + + E+ E D Sbjct: 2098 NKRKSMTKLRGPNPKSSRTTLQSK-----SESEEDDEEDEDDEDED--EEEEDD-----E 2241 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 G D+++ G +E S + E E+ +E+EED+E+E+D+ED+DE+ED++ E Sbjct: 2242 NG--DSSEDGGDSSESSSED-ESEDGDENEEDDEDEDDDEDDDEDEDNESE 2385 Score = 115 (40.5 bits), Expect = 0.0026, P = 0.0026 Identities = 44/213 (20%), Positives = 94/213 (44%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214 + +E++EDE+D+ED++E+ED E E D + Sbjct: 2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2427 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044 Identities = 45/211 (21%), Positives = 95/211 (45%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212 + +E++EDE+D+ED++E+ED E E + D D Sbjct: 2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044 Identities = 44/213 (20%), Positives = 95/213 (44%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214 + +E++EDE+D+ED++E+ED E E + D + Sbjct: 2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433 Score = 100 (35.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18 Identities = 16/38 (42%), Positives = 26/38 (68%), Frame = +1 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +E E ++E E+ +E EED+EDED++EDDD++ Sbjct: 2254 SEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDED 2367 Score = 93 (32.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07 Identities = 42/187 (22%), Positives = 86/187 (45%), Frame = +1 Query: 2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51 K D P+KP K ++ ++ + K PDA+ +S+ S K +W Sbjct: 721 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHK 891 Query: 52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102 + +++ ++E++ + D + E+ T + + K KF D K PP+++ Sbjct: 892 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 1065 Query: 103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162 L+C+E +K + P + + W + +K Y KK + K+ YE ++ + Sbjct: 1066 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1230 Query: 163 AKGKPDAAKKGVVKAEK 179 + P+ ++ V+ EK Sbjct: 1231 LESLPEEEQQRVLGEEK 1281 Score = 86 (30.3 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17 Identities = 14/28 (50%), Positives = 20/28 (71%), Frame = +1 Query: 187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E EDE E+ DE +ED+E++DDDE Sbjct: 2269 DSSESSSEDESEDGDENEEDDEDEDDDE 2352 Score = 71 (25.0 bits), Expect = 0.0050, Sum P(2) = 0.0050 Identities = 46/201 (22%), Positives = 83/201 (41%), Frame = +1 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G P KP +SY+ + C E V +E CS++WK +S KEK + Sbjct: 1030 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1185 Query: 63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116 K YE E+ ++ P+ E ++ + K+ S ++ K E Sbjct: 1186 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEK 1365 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175 P + + E + + E + +L + D++ + AK K A++ + Sbjct: 1366 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1536 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 KA+ S++K E +E + E + EE Sbjct: 1537 KAQ-SERKPGGEREERGKLPESPKRAEE 1617 >X53461;X53260 Human mRNA for upstream binding factor (hUBF) Length = 3097 Plus Strand HSPs: Score = 198 (69.7 bits), Expect = 6.2e-14, P = 6.2e-14 Identities = 57/180 (31%), Positives = 85/180 (47%), Frame = +1 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P T KK K PK+PP + + F Sbjct: 1702 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1881 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164 E GE L + + ++G W + K+ Y+K A + +++Y+ + + Sbjct: 1882 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 2055 Query: 165 GKPD---AAKKGVVKAEKSKKK------KEE----EEDEEDEEDEEEEEDEEDEDEEEDD 211 P A K+ + KS K K + E EED+EE+ED+EDEDEEE+D Sbjct: 2056 LSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 2235 Query: 212 DD 213 D+ Sbjct: 2236 DE 2241 Score = 168 (59.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18 Identities = 52/181 (28%), Positives = 93/181 (51%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GKG +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K K++ Sbjct: 1345 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1518 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119 A KA+ ER+ P GE +++ K P +PKR + +Y + K + Sbjct: 1519 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1677 Query: 120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177 A K EM WNN +K + KKAA+ +++YE++++ RA +++KK + Sbjct: 1678 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1842 Query: 178 EKSK 181 E K Sbjct: 1843 EPKK 1854 Score = 143 (50.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +1 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 PKKP ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ + Sbjct: 481 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 645 Query: 65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 +K +ER + + P + KK P PK P ++ + K++ P + Sbjct: 646 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 816 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 +V LG+ W+ + + + KA + +++YE+ + Y K + +++G+ K+ + Sbjct: 817 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 996 Query: 181 KKKKE 185 K +++ Sbjct: 997 KAERQ 1011 Score = 139 (48.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +1 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDP------- 91 + KKC ++ K + E + + ++ R E K I K T K P Sbjct: 1174 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKG 1353 Query: 92 --NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 PKRP SA F+F E R +++ E P LS ++ + L MWN+ + K Y+ + A Sbjct: 1354 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1533 Query: 150 LKEKYEKDIAAYRA-KGK-PDAAKK 172 LK + E+ R +GK P++ K+ Sbjct: 1534 LKAQSERKPGGEREERGKLPESPKR 1608 Score = 137 (48.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +1 Query: 28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 + H D V F +FS C +W +S E KF + + E Y KG K Sbjct: 295 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 456 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K K P+ PK+P + +F F E R K HP +S D+ K L + + K Y + Sbjct: 457 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 636 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185 + K+++E+++A +R + PD AKK + EK K ++ Sbjct: 637 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 759 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020 Identities = 42/168 (25%), Positives = 86/168 (51%), Frame = +1 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106 RW+ +S +K ++ +A+ + +Y+ + ++ K P + +A+ + S Sbjct: 1954 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2097 Query: 107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 R K++G +P S + K + + DD++ + + E+ E D Sbjct: 2098 NKRKSMTKLRGPNPKSSRTTLQSK-----SESEEDDEEDEDDEDED--EEEEDD-----E 2241 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 G D+++ G +E S + E E+ +E+EED+E+E+D+ED+DE+ED++ E Sbjct: 2242 NG--DSSEDGGDSSESSSED-ESEDGDENEEDDEDEDDDEDDDEDEDNESE 2385 Score = 115 (40.5 bits), Expect = 0.0026, P = 0.0026 Identities = 44/213 (20%), Positives = 94/213 (44%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214 + +E++EDE+D+ED++E+ED E E D + Sbjct: 2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2427 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044 Identities = 45/211 (21%), Positives = 95/211 (45%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212 + +E++EDE+D+ED++E+ED E E + D D Sbjct: 2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044 Identities = 44/213 (20%), Positives = 95/213 (44%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+PKKP M+ Y F Q + H + E + RW+ +S +K ++ Sbjct: 1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998 Query: 62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120 +A+ + +Y+ + ++ + + +K+ + KR K++G +P S Sbjct: 1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 + K + + DD++ E + +E+ + + G + ++E Sbjct: 2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214 + +E++EDE+D+ED++E+ED E E + D + Sbjct: 2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433 Score = 100 (35.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18 Identities = 16/38 (42%), Positives = 26/38 (68%), Frame = +1 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +E E ++E E+ +E EED+EDED++EDDD++ Sbjct: 2254 SEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDED 2367 Score = 93 (32.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07 Identities = 42/187 (22%), Positives = 86/187 (45%), Frame = +1 Query: 2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51 K D P+KP K ++ ++ + K PDA+ +S+ S K +W Sbjct: 721 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHK 891 Query: 52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102 + +++ ++E++ + D + E+ T + + K KF D K PP+++ Sbjct: 892 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 1065 Query: 103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162 L+C+E +K + P + + W + +K Y KK + K+ YE ++ + Sbjct: 1066 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1230 Query: 163 AKGKPDAAKKGVVKAEK 179 + P+ ++ V+ EK Sbjct: 1231 LESLPEEEQQRVLGEEK 1281 Score = 86 (30.3 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17 Identities = 14/28 (50%), Positives = 20/28 (71%), Frame = +1 Query: 187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E EDE E+ DE +ED+E++DDDE Sbjct: 2269 DSSESSSEDESEDGDENEEDDEDEDDDE 2352 Score = 71 (25.0 bits), Expect = 0.0050, Sum P(2) = 0.0050 Identities = 46/201 (22%), Positives = 83/201 (41%), Frame = +1 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G P KP +SY+ + C E V +E CS++WK +S KEK + Sbjct: 1030 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1185 Query: 63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116 K YE E+ ++ P+ E ++ + K+ S ++ K E Sbjct: 1186 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEK 1365 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175 P + + E + + E + +L + D++ + AK K A++ + Sbjct: 1366 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1536 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 KA+ S++K E +E + E + EE Sbjct: 1537 KAQ-SERKPGGEREERGKLPESPKRAEE 1617 >U84139 Bos taurus structure-specific recognition protein 1 (SSRP1) mRNA, Length = 1834 Plus Strand HSPs: Score = 238 (83.8 bits), Expect = 2.3e-18, P = 2.3e-18 Identities = 56/162 (34%), Positives = 91/162 (56%), Frame = +1 Query: 32 DASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADKARYE-REMKTYIPPKGETK---- 85 D S N E + +E + + SA K D + +K R + ++ K K K Sbjct: 688 DESFNPGEEEEDVAEEFDSNASASSSSKEGDSDREEKKRKQLKKAKMAKDRKSRKKPLEV 867 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 KK KDPNAPKRP SA+ L+ + R KIK +HPG+S+ D++KK GE+W + + K+ +++ Sbjct: 868 KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDR 1047 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 KA + +YEK + Y G+ +++K+ K +K K K E++ Sbjct: 1048 KAEDARREYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 1173 Score = 221 (77.8 bits), Expect = 1.6e-16, P = 1.6e-16 Identities = 62/192 (32%), Positives = 97/192 (50%), Frame = +1 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +E+ K + + KA A+ + K + E KK Sbjct: 709 EEEEDVAEEFDSNASASSSSKEGDSDREEKKRKQLKKAKMAKDRKSRKKPL----EVKKG 876 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+S+ D++KK GE+W + + K+ +++KA Sbjct: 877 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDRKA 1053 Query: 148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192 + +YEK + Y +G K D +KK VK EK S K + E Sbjct: 1054 EDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 1233 Query: 193 EEDEEEEEDEEDEDEEE 209 + E DE E + Sbjct: 1234 KSKEFVSSDESSSGENK 1284 Score = 155 (54.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10 Identities = 35/94 (37%), Positives = 53/94 (56%), Frame = +1 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP SV ++ SKK E WK MS ++K +++ Sbjct: 871 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISV--TDLSKKAGEIWKGMSKEKKEEWD 1044 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 A+ + YE+ MK Y +GE+ K+ K K Sbjct: 1045 RKAEDARREYEKAMKEYEGGRGESSKRDKSKKKKK 1149 Score = 43 (15.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10 Identities = 9/21 (42%), Positives = 11/21 (52%), Frame = +2 Query: 100 AFFLFCSEYRPKIKGEHPGLS 120 AF L C+ P+ K HP S Sbjct: 1502 AFPLVCTSLGPQGKASHPAAS 1564 >X58245 Soybean mRNA for HMG-1 like protein Length = 761 Plus Strand HSPs: Score = 231 (81.3 bits), Expect = 3.5e-18, P = 3.5e-18 Identities = 54/133 (40%), Positives = 71/133 (53%), Frame = +1 Query: 80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 138 P G+ K KDPN PKRPPSAFF+F E+R EHP ++ V K G W + Sbjct: 127 PAGKGKAA-KDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDA 303 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +K PY K+ K K +YEK++ AY K +AE EEE ++ E +E Sbjct: 304 EKAPYVAKSEKRKVEYEKNMRAYNKK-----------QAEGPTGGDEEESEKSVSEVNDE 450 Query: 199 EEDEEDEDEEEDDD 212 ++DEE EEEDDD Sbjct: 451 DDDEEGSGEEEDDD 492 Score = 163 (57.4 bits), Expect = 5.7e-11, P = 5.7e-11 Identities = 57/172 (33%), Positives = 72/172 (41%), Frame = +1 Query: 41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPS 99 S+ CS M K K E K ++ K K K KDPN PKRPPS Sbjct: 7 SRPCSPLVSVMKGG-KSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPS 183 Query: 100 AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159 AFF+F E+R EHP K + + A K + + A K EK Sbjct: 184 AFFVFMEEFRKVFNKEHPE------NKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKV 345 Query: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 Y K KK +AE EEE ++ E +E++DEE EEEDDD Sbjct: 346 EYE-KNMRAYNKK---QAEGPTGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 492 Score = 123 (43.3 bits), Expect = 0.00012, P = 0.00012 Identities = 28/86 (32%), Positives = 43/86 (50%), Frame = +1 Query: 1 GKG----DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 56 GKG DP KP+ S++ F++ R+ K+HP+ S K +WKTMS EK Sbjct: 133 GKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKA-VSAVGKAAGAKWKTMSDAEK 309 Query: 57 GKFEDMAKADKARYEREMKTYIPPKGE 83 + ++ K YE+ M+ Y + E Sbjct: 310 APYVAKSEKRKVEYEKNMRAYNKKQAE 390 >X80460 M.musculus HMG1-R-135 gene Length = 190 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18 Identities = 28/37 (75%), Positives = 29/37 (78%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNF 37 GK DPKK RGKMSSYAFF+QT HKKKHPDAS F Sbjct: 4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHPDASSTF 114 Score = 113 (39.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18 Identities = 22/28 (78%), Positives = 25/28 (89%), Frame = +2 Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDM 62 + SEFSKKCSER +TM+AKEKGKFEDM Sbjct: 104 LQLSEFSKKCSER*ETMTAKEKGKFEDM 187 >L08815 Chicken CIIDBP (homologous to human SSRP-1 and mouse T160 genes) Length = 2092 Plus Strand HSPs: Score = 236 (83.1 bits), Expect = 4.3e-18, P = 4.3e-18 Identities = 56/167 (33%), Positives = 95/167 (56%), Frame = +3 Query: 32 DASVNFSEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYE---REMKTYIPPKGETK-K 86 D S N E +E + + ++ + D + +K + + +K P K + + K Sbjct: 1323 DESFNPGEEDDDVAEEFDSNASSSSSSGDGDSDRGEKKSSQEGPKIVKDRKPRKKQVESK 1502 Query: 87 KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 146 K KDPN PKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++K Sbjct: 1503 KGKDPNVPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRK 1682 Query: 147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 A K YEK + Y K +++K E+SKKKK+++E + + E++ Sbjct: 1683 AEDAKRDYEKAMKEYSVGNKSESSKM-----ERSKKKKKKQEKQMKGKGEKK 1823 Score = 151 (53.2 bits), Expect = 5.1e-08, P = 5.1e-08 Identities = 54/169 (31%), Positives = 83/169 (49%), Frame = +3 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 1503 KGKDPNVPKRPMSAYMLWLNANREKIKSDHPGISI--TDLSKKAGELWKAMSKEKKEEWD 1676 Query: 61 DMAKADKARYEREMKTY-IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119 A+ K YE+ MK Y + K E+ K + K+ E + K KGE G Sbjct: 1677 RKAEDAKRDYEKAMKEYSVGNKSESSKMERSKKKKKK---------QEKQMKGKGEKKGS 1829 Query: 120 ------SIGDVAKKLGEMWNN---TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170 S AK + E + + ++D+ E K KE E + A A+ D+A Sbjct: 1830 PSKSSSSTKSSAKTMSESFKSKEFVSSDESSSAESK----KEDSEDERGASPAQSSEDSA 1997 >X71139 D.melanogaster HMG-Z mRNA Length = 1127 Plus Strand HSPs: Score = 230 (81.0 bits), Expect = 5.8e-18, P = 5.8e-18 Identities = 59/173 (34%), Positives = 93/173 (53%), Frame = +1 Query: 26 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 H+++ P +++ +S S T AK K E A+ + YIP + Sbjct: 55 HRQQSPVSTIQYSVSSTSI*T---TFRAK---KSEAEAQRQGKLLKCSAFIYIPREKLN* 216 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 + + PKRP SA+ L+ +E R +IK ++PG + D+AK+ GE+W DK +E+ Sbjct: 217 TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQ 390 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAA---KKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 KA K+KE+Y K + Y A G D+ K+ A+ +KK K++E EE+EEDE E Sbjct: 391 KAIKMKEEYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 558 Score = 217 (76.4 bits), Expect = 1.7e-16, P = 1.7e-16 Identities = 58/182 (31%), Positives = 93/182 (51%), Frame = +1 Query: 26 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 H+++ P +++ +S S T AK K E A+ + YIP + Sbjct: 55 HRQQSPVSTIQYSVSSTSI*T---TFRAK---KSEAEAQRQGKLLKCSAFIYIPREKLN* 216 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 + + PKRP SA+ L+ +E R +IK ++PG + D+AK+ GE+W DK +E+ Sbjct: 217 TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQ 390 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 KA K+KE+Y K + Y A G D+ A K +KK + ++ ++ E EE+EEDE Sbjct: 391 KAIKMKEEYNKAVKEYEANGGTDSG------APKKRKKAAAKPAKKAKKKESSEEEEEDE 552 Query: 206 DE 207 E Sbjct: 553 SE 558 Score = 207 (72.9 bits), Expect = 2.4e-15, P = 2.4e-15 Identities = 59/184 (32%), Positives = 91/184 (49%), Frame = +1 Query: 26 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 H+++ P +++ +S S T AK K E A+ + YIP + Sbjct: 55 HRQQSPVSTIQYSVSSTSI*T---TFRAK---KSEAEAQRQGKLLKCSAFIYIPREKLN* 216 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 + + PKRP SA+ L+ +E R +IK ++PG + D+AK+ GE+W DK +E+ Sbjct: 217 TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQ 390 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 KA K+KE+Y K + Y A G D+ G K K K ++ ++ E EEEEEDE Sbjct: 391 KAIKMKEEYNKAVKEYEANGGTDS---GAPKKRKKAAAKPAKKAKKKESSEEEEEDES-- 555 Query: 206 DEEE 209 E Sbjct: 556 ---E 558 Score = 196 (69.0 bits), Expect = 4.0e-14, P = 4.0e-14 Identities = 48/137 (35%), Positives = 74/137 (54%), Frame = +1 Query: 77 YIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTA 136 YIP + + + PKRP SA+ L+ +E R +IK ++PG + D+AK+ GE+W Sbjct: 190 YIPREKLN*TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK 369 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 DK +E+KA K+KE+Y K + Y A G D+ A K +KK + ++ ++ E Sbjct: 370 --DKTEWEQKAIKMKEEYNKAVKEYEANGGTDSG------APKKRKKAAAKPAKKAKKKE 525 Query: 197 EEEEDEEDEDEEEDDDD 213 EE+EEDE E Sbjct: 526 SSEEEEEDESE------ 558 >L08814 Rat CIIDBP (homologous to human SSRP-1 and mouse T160 genes) mRNA, Length = 2082 Plus Strand HSPs: Score = 234 (82.4 bits), Expect = 7.0e-18, P = 7.0e-18 Identities = 52/161 (32%), Positives = 89/161 (55%), Frame = +1 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +E+ K + + +A A+ + K K KK Sbjct: 1012 EEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRK-----KSSEGKK 1176 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++K Sbjct: 1177 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKG 1356 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + +YE+ + Y G+ D++K+ K +K K K E++ Sbjct: 1357 EDARREYEEAMKEYEG-GRGDSSKRDKSKKKKKVKAKLEKK 1476 Score = 145 (51.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11 Identities = 32/94 (34%), Positives = 51/94 (54%), Frame = +1 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 1174 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1347 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 + + YE MK Y +G++ K+ K K Sbjct: 1348 RKGEDARREYEEAMKEYEGGRGDSSKRDKSKKKKK 1452 Score = 71 (25.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11 Identities = 21/70 (30%), Positives = 33/70 (47%), Frame = +1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE-EDEEE 198 K+ KK K+K K EK R A+ + + + KSK+ +E E + +++ Sbjct: 1423 KRDKSKKKKKVKAKLEKKSTPSRGSSSK-ASSRQLSDSFKSKEFVSSDESSSGENKSKKK 1599 Query: 199 EEDEEDEDEEE 209 ED DEEE Sbjct: 1600 RRRSEDSDEEE 1632 Score = 59 (20.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09 Identities = 19/75 (25%), Positives = 30/75 (40%), Frame = +1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ KK K+K K EK R +++ + S K +E DE E Sbjct: 1423 KRDKSKKKKKVKAKLEKKSTPSRGSSSKASSR------QLSDSFKSKEFVSSDESSSGEN 1584 Query: 200 EDEEDEDEEEDDDDE 214 + ++ ED D+E Sbjct: 1585 KSKKKRRRSEDSDEE 1629 >I66609 Sequence 8 from patent US 5670621. Length = 1898 Plus Strand HSPs: Score = 232 (81.7 bits), Expect = 1.1e-17, P = 1.1e-17 Identities = 53/161 (32%), Positives = 90/161 (55%), Frame = +1 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K + E KK Sbjct: 1012 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1179 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1180 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1356 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + YEK + Y G+ +++K+ K +K K K E++ Sbjct: 1357 EDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 1476 Score = 217 (76.4 bits), Expect = 4.4e-16, P = 4.4e-16 Identities = 62/192 (32%), Positives = 96/192 (50%), Frame = +1 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K + E KK Sbjct: 1012 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1179 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1180 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1356 Query: 148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192 + YEK + Y +G K D +KK VK EK S K + E Sbjct: 1357 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 1536 Query: 193 EEDEEEEEDEEDEDEEE 209 + E DE E + Sbjct: 1537 KSKEFVSSDESSSGENK 1587 Score = 152 (53.5 bits), Expect = 3.0e-08, P = 3.0e-08 Identities = 34/94 (36%), Positives = 53/94 (56%), Frame = +1 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 1174 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1347 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 A+ + YE+ MK Y +GE+ K+ K K Sbjct: 1348 RKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKK 1452 >Y08297 Z.mays mRNA for HMGc1 protein Length = 784 Plus Strand HSPs: Score = 226 (79.6 bits), Expect = 1.2e-17, P = 1.2e-17 Identities = 59/154 (38%), Positives = 84/154 (54%), Frame = +2 Query: 49 KTMS-AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSE 107 KT++ A KGK D +K D+ R G+ +KK PKRPPSAFF+F SE Sbjct: 68 KTLAPATMKGK-ADTSKKDEGRLRAGGAA-----GK-RKKAAASGKPKRPPSAFFVFMSE 226 Query: 108 YRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166 +R + + HPG S+ V+K GE W + +KQPY +A + K+ YEK A + K + Sbjct: 227 FRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDKK-E 403 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 ++KK K E K E +DE+ DEE ++DE Sbjct: 404 STSSKKA--KTEDEDGSKSEVDDEDGSSDEENDDDE 505 Score = 214 (75.3 bits), Expect = 2.2e-16, P = 2.2e-16 Identities = 51/129 (39%), Positives = 71/129 (55%), Frame = +2 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPY 143 +KK PKRPPSAFF+F SE+R + + HPG S+ V+K GE W + +KQPY Sbjct: 158 RKKAAASGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPY 337 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +A + K+ YEK A + D K E + KK + EDE+ + E ++ED Sbjct: 338 VDQAGQKKQDYEKTKANF------D-------KKESTSSKKAKTEDEDGSKSEVDDEDGS 478 Query: 204 DEDEEEDDDD 213 DEE DDD+ Sbjct: 479 S-DEENDDDE 505 Score = 214 (75.3 bits), Expect = 2.2e-16, P = 2.2e-16 Identities = 51/130 (39%), Positives = 72/130 (55%), Frame = +2 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPY 143 +KK PKRPPSAFF+F SE+R + + HPG S+ V+K GE W + +KQPY Sbjct: 158 RKKAAASGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPY 337 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +A + K+ YEK A + K ++ SKK K E+ED + E +DE+ Sbjct: 338 VDQAGQKKQDYEKTKANFDKK-----------ESTSSKKAKTEDEDGS----KSEVDDED 472 Query: 204 DEDEEEDDDDE 214 +EE+DDDE Sbjct: 473 GSSDEENDDDE 505 Score = 111 (39.1 bits), Expect = 0.0037, P = 0.0037 Identities = 26/87 (29%), Positives = 44/87 (50%), Frame = +2 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G PK+P S++ F+ R+E++ HP + + + SK E+W+ MS +EK + D Sbjct: 179 GKPKRPP---SAFFVFMSEFRQEYQALHP-GNKSVATVSKAAGEKWRAMSDQEKQPYVDQ 346 Query: 63 AKADKARYEREMKTYIPPKGETKKKFK 89 A K YE+ + + + KK K Sbjct: 347 AGQKKQDYEKTKANFDKKESTSSKKAK 427 >M86737 Human high mobility group box (SSRP1) mRNA, complete cds. Length = 2839 Plus Strand HSPs: Score = 232 (81.7 bits), Expect = 1.4e-17, P = 1.4e-17 Identities = 53/161 (32%), Positives = 90/161 (55%), Frame = +2 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K + E KK Sbjct: 1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + YEK + Y G+ +++K+ K +K K K E++ Sbjct: 2075 EDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 2194 Score = 217 (76.4 bits), Expect = 5.6e-16, P = 5.6e-16 Identities = 62/192 (32%), Positives = 96/192 (50%), Frame = +2 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K + E KK Sbjct: 1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074 Query: 148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192 + YEK + Y +G K D +KK VK EK S K + E Sbjct: 2075 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 2254 Query: 193 EEDEEEEEDEEDEDEEE 209 + E DE E + Sbjct: 2255 KSKEFVSSDESSSGENK 2305 Score = 152 (53.5 bits), Expect = 3.5e-08, P = 3.5e-08 Identities = 34/94 (36%), Positives = 53/94 (56%), Frame = +2 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 1892 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 2065 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 A+ + YE+ MK Y +GE+ K+ K K Sbjct: 2066 RKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKK 2170 >I66608 Sequence 6 from patent US 5670621. Length = 2839 Plus Strand HSPs: Score = 232 (81.7 bits), Expect = 1.4e-17, P = 1.4e-17 Identities = 53/161 (32%), Positives = 90/161 (55%), Frame = +2 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K + E KK Sbjct: 1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + YEK + Y G+ +++K+ K +K K K E++ Sbjct: 2075 EDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 2194 Score = 217 (76.4 bits), Expect = 5.6e-16, P = 5.6e-16 Identities = 62/192 (32%), Positives = 96/192 (50%), Frame = +2 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K + E KK Sbjct: 1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074 Query: 148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192 + YEK + Y +G K D +KK VK EK S K + E Sbjct: 2075 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 2254 Query: 193 EEDEEEEEDEEDEDEEE 209 + E DE E + Sbjct: 2255 KSKEFVSSDESSSGENK 2305 Score = 152 (53.5 bits), Expect = 3.5e-08, P = 3.5e-08 Identities = 34/94 (36%), Positives = 53/94 (56%), Frame = +2 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 1892 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 2065 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95 A+ + YE+ MK Y +GE+ K+ K K Sbjct: 2066 RKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKK 2170 >Y08807 Z.mays mRNA for HMG protein Length = 731 Plus Strand HSPs: Score = 222 (78.1 bits), Expect = 3.3e-17, P = 3.3e-17 Identities = 47/111 (42%), Positives = 66/111 (59%), Frame = +1 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQ 141 +TK + KDPN PKRPPSAFF+F E+R K +HP + + + K G+ W + + +K Sbjct: 91 KTKAE-KDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKA 267 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193 PY KA KLK +Y K I AY K D G ++KSK + +E++E DE Sbjct: 268 PYVSKAEKLKAEYTKKIDAYNNKQSGDPTASG--DSDKSKSEVNDEDEEGDE 417 Score = 121 (42.6 bits), Expect = 0.00019, P = 0.00019 Identities = 23/74 (31%), Positives = 42/74 (56%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP KP+ S++ F++ R+++K+KHP+ S K ++WK++S EK + A Sbjct: 109 DPNKPKRPPSAFFVFMEEFRKDYKEKHPNVK-QVSVIGKAGGDKWKSLSDAEKAPYVSKA 285 Query: 64 KADKARYEREMKTY 77 + KA Y +++ Y Sbjct: 286 EKLKAEYTKKIDAY 327 >Y08298 Z.mays mRNA for HMGc2 protein Length = 828 Plus Strand HSPs: Score = 217 (76.4 bits), Expect = 9.9e-17, P = 9.9e-17 Identities = 55/154 (35%), Positives = 86/154 (55%), Frame = +1 Query: 56 KGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115 KGK + +K D+AR ++ G+ +KK PKRPPSAFF+F SE+R + + + Sbjct: 4 KGK-ANASKKDEAR----LRAGGGGAGK-RKKAAASGKPKRPPSAFFVFMSEFRQEYQAQ 165 Query: 116 HPG-LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV 174 HPG S+ V+K GE W + + +KQPY +A + K+ YEK K + Sbjct: 166 HPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKKQDYEK-------------TKANI 306 Query: 175 VKAEKSKKKKEEEED-EEDEEDEEEEEDEEDEDEEE 209 K+ SKK K +++D + E D+E+ +ED D++E Sbjct: 307 EKSTSSKKAKTDDDDGSKSEVDDEDGGSDEDNDDDE 414 Score = 210 (73.9 bits), Expect = 5.5e-16, P = 5.5e-16 Identities = 47/129 (36%), Positives = 71/129 (55%), Frame = +1 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPY 143 +KK PKRPPSAFF+F SE+R + + +HPG S+ V+K GE W + + +KQPY Sbjct: 73 RKKAAASGKPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPY 252 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +A + K+ YEK K + K+ SKK K D++D E ++++ Sbjct: 253 VDQAGQKKQDYEK-------------TKANIEKSTSSKKAKT---DDDDGSKSEVDDEDG 384 Query: 204 DEDEEEDDDD 213 DE+ DDD+ Sbjct: 385 GSDEDNDDDE 414 Score = 150 (52.8 bits), Expect = 2.7e-08, P = 2.7e-08 Identities = 42/130 (32%), Positives = 69/130 (53%), Frame = +1 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144 +KK PKRPPSAFF+F SE+R + + +HPG K + + + AA +K + Sbjct: 73 RKKAAASGKPKRPPSAFFVFMSEFRQEYQAQHPG------NKSVAAV--SKAAGEK--WR 222 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 + + K+ Y D A + K + K + K+ SKK K +++D + E +DE+ Sbjct: 223 SMSEQEKQPYV-DQAGQK-KQDYEKTKANIEKSTSSKKAKTDDDDGS----KSEVDDEDG 384 Query: 205 EDEEEDDDDE 214 +E++DDDE Sbjct: 385 GSDEDNDDDE 414 Score = 114 (40.1 bits), Expect = 0.0017, P = 0.0017 Identities = 30/93 (32%), Positives = 49/93 (52%), Frame = +1 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G PK+P S++ F+ R+E++ +HP + + + SK E+W++MS +EK + D Sbjct: 94 GKPKRPP---SAFFVFMSEFRQEYQAQHP-GNKSVAAVSKAAGEKWRSMSEQEKQPYVDQ 261 Query: 63 AKADKARYEREMKTYIPPKGETKK-KFKDPNAPK 95 A K YE+ K I +KK K D + K Sbjct: 262 AGQKKQDYEKT-KANIEKSTSSKKAKTDDDDGSK 360 >M77023 Drosophila melanogaster high mobility group protein mRNA, complete Length = 940 Plus Strand HSPs: Score = 216 (76.0 bits), Expect = 1.1e-16, P = 1.1e-16 Identities = 48/118 (40%), Positives = 70/118 (59%), Frame = +3 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 TK + PKRP SA+ L+ + R IK E+PG+ + +VAK+ GE+W A DK + Sbjct: 81 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 254 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-----AEKSKKKKEEEEDEEDEEDEEE 198 E KAAK K+ Y++ + + A G AA G K A+K KK ++EE +ED++DE E Sbjct: 255 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 434 Score = 206 (72.5 bits), Expect = 1.3e-15, P = 1.3e-15 Identities = 47/126 (37%), Positives = 69/126 (54%), Frame = +3 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 TK + PKRP SA+ L+ + R IK E+PG+ + +VAK+ GE+W A DK + Sbjct: 81 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 254 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E KAAK K+ Y++ + + A G AA G K KK ++ ++ EE DE+ Sbjct: 255 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKK------EESDED 416 Query: 204 DEDEEE 209 D+DE E Sbjct: 417 DDDESE 434 Score = 190 (66.9 bits), Expect = 1.0e-13, P = 1.0e-13 Identities = 45/131 (34%), Positives = 69/131 (52%), Frame = +3 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 TK + PKRP SA+ L+ + R IK E+PG+ + +VAK+ GE+W A DK + Sbjct: 81 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 254 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E KAAK K+ Y++ + + A G AA G K KK ++ +++E DE++ Sbjct: 255 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDD----- 419 Query: 204 DEDEEEDDDDE 214 DD+ E Sbjct: 420 ------DDESE 434 Score = 101 (35.6 bits), Expect = 0.069, P = 0.067 Identities = 25/71 (35%), Positives = 45/71 (63%), Frame = +3 Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 KP+ +S+Y ++ + RE K+++P V +E +K+ E W+ M K+K ++E AKA Sbjct: 108 KPKRPLSAYMLWLNSARESIKRENPGIKV--TEVAKRGGELWRAM--KDKSEWE--AKAA 269 Query: 67 KAR--YEREMKTY 77 KA+ Y+R +K + Sbjct: 270 KAKDDYDRAVKEF 308 >I66610 Sequence 9 from patent US 5670621. Length = 1444 Plus Strand HSPs: Score = 220 (77.4 bits), Expect = 1.5e-16, P = 1.5e-16 Identities = 52/155 (33%), Positives = 87/155 (56%), Frame = +1 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 ++ D + F + S + S +++ K + + KA A+ + K + E KK Sbjct: 1012 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1179 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 KDPNAPKRP SA+ L+ + R KIK +HPG+SI D++KK GE+W + + K+ +++KA Sbjct: 1180 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1356 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 + YEK + Y G+ +++K+ +KSKK Sbjct: 1357 EDARRDYEKAMKEYEG-GRGESSKR-----DKSKK 1443 Score = 150 (52.8 bits), Expect = 5.9e-08, P = 5.9e-08 Identities = 33/88 (37%), Positives = 52/88 (59%), Frame = +1 Query: 2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 KG DP P+ MS+Y ++ RE+ K HP S+ ++ SKK E WK MS ++K +++ Sbjct: 1174 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1347 Query: 61 DMAKADKARYEREMKTYIPPKGETKKKFK 89 A+ + YE+ MK Y +GE+ K+ K Sbjct: 1348 RKAEDARRDYEKAMKEYEGGRGESSKRDK 1434 >X71138 D.melanogaster HMG-D mRNA Length = 1274 Plus Strand HSPs: Score = 216 (76.0 bits), Expect = 3.2e-16, P = 3.2e-16 Identities = 48/118 (40%), Positives = 70/118 (59%), Frame = +1 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 TK + PKRP SA+ L+ + R IK E+PG+ + +VAK+ GE+W A DK + Sbjct: 76 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 249 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-----AEKSKKKKEEEEDEEDEEDEEE 198 E KAAK K+ Y++ + + A G AA G K A+K KK ++EE +ED++DE E Sbjct: 250 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 429 Score = 206 (72.5 bits), Expect = 4.1e-15, P = 4.1e-15 Identities = 47/126 (37%), Positives = 69/126 (54%), Frame = +1 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 TK + PKRP SA+ L+ + R IK E+PG+ + +VAK+ GE+W A DK + Sbjct: 76 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 249 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E KAAK K+ Y++ + + A G AA G K KK ++ ++ EE DE+ Sbjct: 250 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKK------EESDED 411 Query: 204 DEDEEE 209 D+DE E Sbjct: 412 DDDESE 429 Score = 190 (66.9 bits), Expect = 2.3e-13, P = 2.3e-13 Identities = 45/131 (34%), Positives = 69/131 (52%), Frame = +1 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 TK + PKRP SA+ L+ + R IK E+PG+ + +VAK+ GE+W A DK + Sbjct: 76 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 249 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E KAAK K+ Y++ + + A G AA G K KK ++ +++E DE++ Sbjct: 250 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDD----- 414 Query: 204 DEDEEEDDDDE 214 DD+ E Sbjct: 415 ------DDESE 429 Score = 101 (35.6 bits), Expect = 0.084, P = 0.080 Identities = 25/71 (35%), Positives = 45/71 (63%), Frame = +1 Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 KP+ +S+Y ++ + RE K+++P V +E +K+ E W+ M K+K ++E AKA Sbjct: 103 KPKRPLSAYMLWLNSARESIKRENPGIKV--TEVAKRGGELWRAM--KDKSEWE--AKAA 264 Query: 67 KAR--YEREMKTY 77 KA+ Y+R +K + Sbjct: 265 KAKDDYDRAVKEF 303 >M93253 Chironomus tentans high mobility group protein 1a (HMG1a) mRNA, Length = 1074 Plus Strand HSPs: Score = 211 (74.3 bits), Expect = 6.9e-16, P = 6.9e-16 Identities = 46/119 (38%), Positives = 70/119 (58%), Frame = +2 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144 ++K K PKRP SA+ L+ + R IK E+P + ++AKK GE+W DK +E Sbjct: 176 QEKIKMAEKPKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELWRGMK--DKSEWE 349 Query: 145 KKAAKLKEKYEKDIAAYRAKG--KPDAA---KKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 KAAK+KE+YEK + + G K A K+G +K KK +++D ED+E+E+E Sbjct: 350 AKAAKMKEEYEKAMKEFERNGGDKSSGASTKKRGKAAEKKKPAKKSKKKDSEDDEEEDES 529 Query: 200 E 200 + Sbjct: 530 D 532 Score = 198 (69.7 bits), Expect = 2.1e-14, P = 2.1e-14 Identities = 46/129 (35%), Positives = 72/129 (55%), Frame = +2 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144 ++K K PKRP SA+ L+ + R IK E+P + ++AKK GE+W DK +E Sbjct: 176 QEKIKMAEKPKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELWRGMK--DKSEWE 349 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 KAAK+KE+YEK + + G ++ K K+ +KK+ + + +++D ED Sbjct: 350 AKAAKMKEEYEKAMKEFERNGGDKSSGASTKKRGKAAEKKKPAK-------KSKKKDSED 508 Query: 205 EDEEEDDDD 213 DEEED+ D Sbjct: 509 -DEEEDESD 532 Score = 189 (66.5 bits), Expect = 2.1e-13, P = 2.1e-13 Identities = 46/130 (35%), Positives = 72/130 (55%), Frame = +2 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144 ++K K PKRP SA+ L+ + R IK E+P + ++AKK GE+W DK +E Sbjct: 176 QEKIKMAEKPKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELWRGMK--DKSEWE 349 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 KAAK+KE+YEK + + G ++ K K+ +KK+ + + +++D ED Sbjct: 350 AKAAKMKEEYEKAMKEFERNGGDKSSGASTKKRGKAAEKKKPAK-------KSKKKDSED 508 Query: 205 EDEEEDDDDE 214 DEEED+ D Sbjct: 509 -DEEEDESD- 532 Score = 120 (42.2 bits), Expect = 0.00043, P = 0.00043 Identities = 34/94 (36%), Positives = 55/94 (58%), Frame = +2 Query: 6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 65 +KP+ +S+Y ++ + RE KK++PD V +E +KK E W+ M K+K ++E A Sbjct: 197 EKPKRPLSAYMLWLNSARESIKKENPDFKV--TEIAKKGGELWRGM--KDKSEWEAKAAK 364 Query: 66 DKARYEREMKTYIPPKGE------TKKKFKDPNAPKRPPS 99 K YE+ MK + G+ TKK+ K A K+ P+ Sbjct: 365 MKEEYEKAMKEFERNGGDKSSGASTKKRGKA--AEKKKPA 478 >M74017 T.brucei rhodesiense HMG1-like protein mRNA, complete cds. Length = 2070 Plus Strand HSPs: Score = 214 (75.3 bits), Expect = 9.9e-16, P = 9.9e-16 Identities = 56/158 (35%), Positives = 85/158 (53%), Frame = +1 Query: 5 PKKP----RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 PKKP + +SSY FV REE K K+P + + + + W S K + Sbjct: 472 PKKPADYPKPAVSSYLLFVADQREELKAKNP--GMQNTAILQTLGKMWSDASDDVKEHYR 645 Query: 61 DMAKADKARYEREMKTYIPPKGETK----KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116 A+ DKAR+ RE+ Y G+ K KD NAPKR ++F F S++R K H Sbjct: 646 KKAEEDKARFRREVDEYKRQGGKEYGRGGKIKKDSNAPKRAMTSFMFFSSDFRSK----H 813 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAA 160 LSI +++K G W ++++ YE+ A K KE+Y++++AA Sbjct: 814 SDLSIVEMSKAAGAAWKELGPEERKVYEEMAEKDKERYKREMAA 945 Score = 170 (59.8 bits), Expect = 5.2e-11, P = 5.2e-11 Identities = 39/146 (26%), Positives = 75/146 (51%), Frame = +1 Query: 39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98 EF K+ K A + + +A A E KT K T+K K + PK Sbjct: 337 EFKKQLELALKEKDASKSSGGKGSKRARSAGAEAPSKT---KKEMTEKPKKPADYPKPAV 507 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 158 S++ LF ++ R ++K ++PG+ + + LG+MW++ + D K+ Y KKA + K ++ +++ Sbjct: 508 SSYLLFVADQREELKAKNPGMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDKARFRREV 687 Query: 159 AAYRAKGKPDAAKKGVVKAEKSKKKK 184 Y+ +G + + G +K + + K+ Sbjct: 688 DEYKRQGGKEYGRGGKIKKDSNAPKR 765 >X80459 M.musculus HMG1-R-177 gene Length = 173 Plus Strand HSPs: Score = 119 (41.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15 Identities = 25/33 (75%), Positives = 26/33 (78%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDA 33 GK DPKK RGKMSSYAFF+QT HKKKH DA Sbjct: 4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHLDA 102 Score = 112 (39.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15 Identities = 20/22 (90%), Positives = 22/22 (100%), Frame = +2 Query: 36 NFSEFSKKCSERWKTMSAKEKG 57 NFSEFSKKCSERW+TM+AKEKG Sbjct: 107 NFSEFSKKCSERWETMTAKEKG 172 >X15317 Yeast NHP6A gene for nonhistone protein Length = 591 Plus Strand HSPs: Score = 206 (72.5 bits), Expect = 2.0e-15, P = 2.0e-15 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = +1 Query: 74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133 M T PK T +K KDPNAPKR SA+ F +E R ++ E+P ++ G V KKLGE W Sbjct: 94 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 273 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 ++KQPYE KA K++YE + Y A Sbjct: 274 ALTPEEKQPYEAKAQADKKRYESEKELYNA 363 Score = 152 (53.5 bits), Expect = 1.1e-09, P = 1.1e-09 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF R+ + ++PD + F + KK E+WK ++ +EK +E Sbjct: 136 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 309 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 310 KAQADKKRYESEKELY 357 >Y14074 Arabidopsis thaliana mRNA for HMG gamma protein Length = 701 Plus Strand HSPs: Score = 205 (72.2 bits), Expect = 2.2e-15, P = 2.2e-15 Identities = 49/139 (35%), Positives = 69/139 (49%), Frame = +1 Query: 63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSI 121 +KA ++ +KT G KK KDPN PKRPPSAFF+F ++R + +P S+ Sbjct: 19 SKAGATSTDQRLKTRGRKAG--KKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSV 192 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 V K G W + +DK PY KA K +Y K++ Y K G + E Sbjct: 193 ATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLK-----LASGTNREEDDS 357 Query: 182 KKKEEEEDEEDEEDEEEEED 201 K + E DE E+E E++D Sbjct: 358 DKSKSEVDEAVSEEEAEDDD 417 Score = 94 (33.1 bits), Expect = 0.34, P = 0.29 Identities = 19/76 (25%), Positives = 41/76 (53%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP +P+ S++ F++ R+E +P+ + + + K RWK+M+ ++K + Sbjct: 88 KKDPNQPKRPPSAFFVFLEDFRKEFNLANPN-NKSVATVGKAAGARWKSMTDEDKAPYVA 264 Query: 62 MAKADKARYEREMKTY 77 A++ K Y + ++ Y Sbjct: 265 KAESRKTEYIKNVQQY 312 >X57201 X.laevis xUBFbeta2 mRNA for upstream binding factor 1 Length = 3729 Plus Strand HSPs: Score = 148 (52.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15 Identities = 41/184 (22%), Positives = 88/184 (47%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P+ P+ ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ Sbjct: 605 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQ 778 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + +K +ER + + + + K + P++P + L+ + R H S Sbjct: 779 DFQREKLEFERNLARFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 958 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 DV LG+ W+ + + KA + +++YE + Y K + A++G+ ++ + Sbjct: 959 KDVKDALGKQWSQLTDKKRLKWIHKALEQRKQYEGIMREYMQKHPELNIAEEGITRSTLT 1138 Query: 181 KKKKE 185 K +++ Sbjct: 1139 KAERQ 1153 Score = 131 (46.1 bits), Expect = 3.3e-05, P = 3.3e-05 Identities = 40/144 (27%), Positives = 70/144 (48%), Frame = +2 Query: 86 KKFKDPNAPKRPP-SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144 KK K PK+ P + + F E GE L + + ++G W+ + K Y+ Sbjct: 1718 KKVKFLGEPKKAPMNGYQKFSQELLSN--GELNHLPLKERMVEIGSRWHRISPSQKDYYK 1891 Query: 145 KKAAKLKEKYE------------KDIAAYRAKG--KPDAAKKGVVKAEKSK--KKKEEEE 188 K A + Y +D AAY+ + K + K V K K + + ++ Sbjct: 1892 KLAEDQQRVYRTQFDTWMKGLSSQDRAAYKEQNSNKRKSTAKIQVPVAKPKLVAQSKSDD 2071 Query: 189 DEEDEEDEEEEEDEEDEDEEEDDDDE 214 D+ED++D+E+E+D++DEDE+++D E Sbjct: 2072 DDEDDDDDEDEDDDDDEDEDKEDSSE 2149 Score = 126 (44.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12 Identities = 44/165 (26%), Positives = 75/165 (45%), Frame = +2 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 E H + A N+S C ++W +S E KF +++ + E P KG Sbjct: 437 ESHLDWNKLAFKNYS--GSMCRQKWMEIS-NEVRKFRTLSELI---LDAEEHVRHPYKG- 595 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 KK K P PK+P + +F F E R K HP +S D+ K L + + K Y Sbjct: 596 -KKLKKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKY 772 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + + K ++E+++A +R + PD + K++ +K K ++ Sbjct: 773 IQDFQREKLEFERNLARFREE-HPDLMQNPK-KSDVPEKPKTPQQ 901 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020 Identities = 48/217 (22%), Positives = 96/217 (44%), Frame = +2 Query: 2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51 K D P+KP+ + + R+ + K H DAS +S+ + K +W Sbjct: 863 KSDVPEKPK---TPQQLWYNHERKVYLKLHADASTKDVKDALGKQWSQLTDKKRLKWIHK 1033 Query: 52 SAKEKGKFED-----MAKADKARYERE---MKTYIPPKGETKKKFKDPNAPKRPPSAFFL 103 + +++ ++E M K + E T + + K KF D K PP+++ + Sbjct: 1034 ALEQRKQYEGIMREYMQKHPELNIAEEGITRSTLTKAERQLKDKF-DGRPTKPPPNSYSM 1210 Query: 104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 +C+E +K + P + + W + +K Y KK + K+ YE ++ + Sbjct: 1211 YCAELMANMK-DVPST---ERMVLCSQRWKLLSQKEKDAYNKKCEQRKKDYEVELMRF-L 1375 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + P+ ++ V+ EK + + + D++ DE + E + EE Sbjct: 1376 ESLPEEEQQRVLAEEKMVRSRSGQADKKKAADERAKLPETPKTAEE 1513 Score = 113 (39.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10 Identities = 41/145 (28%), Positives = 69/145 (47%), Frame = +2 Query: 40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGET-KKKFKDPNA--PKR 96 ++KKC +R K + E + + ++ R E K G+ KKK D A P+ Sbjct: 1316 YNKKCEQRKKDYEVELMRFLESLPEEEQQRVLAEEKMVRSRSGQADKKKAADERAKLPET 1495 Query: 97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM---WNNTAADDKQPYEKKAAKLKEK 153 P +A + ++ + G++ D AK L M W N +K + KKAA+ +++ Sbjct: 1496 PKTAEEI----WQQSVIGDYLARFKNDRAKALKSMEGTWLNMEKKEKIMWIKKAAEDQKR 1663 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 YE++++ RA P A K V + KK Sbjct: 1664 YERELSDMRATPTPTTAGKKVKFLGEPKK 1750 Score = 112 (39.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15 Identities = 20/31 (64%), Positives = 24/31 (77%), Frame = +2 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 + +ED ED E+ E+EE EEDEDEEEDDDD Sbjct: 2165 ESSSDEDSEDGEENEDEEGEEDEDEEEDDDD 2257 Score = 101 (35.6 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14 Identities = 21/50 (42%), Positives = 32/50 (64%), Frame = +2 Query: 163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 AK + AK +V KS E+++D+EDE+D+++E DE+ ED ED D Sbjct: 2012 AKIQVPVAKPKLVAQSKSDDDDEDDDDDEDEDDDDDE-DEDKEDSSEDGD 2158 Score = 98 (34.5 bits), Expect = 0.24, P = 0.21 Identities = 25/85 (29%), Positives = 42/85 (49%), Frame = +2 Query: 130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + W ++ D+ Y+++ + K K I AK K A K + +E+E Sbjct: 1934 DTWMKGLSSQDRAAYKEQNSN-KRKSTAKIQVPVAKPKLVAQSKS--DDDDEDDDDDEDE 2104 Query: 189 DEEDEEDEEEEEDEEDEDEEEDDDDE 214 D++D+EDE++E+ ED D E DE Sbjct: 2105 DDDDDEDEDKEDSSEDGDSSESSSDE 2182 Score = 97 (34.1 bits), Expect = 0.31, P = 0.27 Identities = 44/211 (20%), Positives = 86/211 (40%), Frame = +2 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G+PKK M+ Y F Q + H + E + RW +S +K ++ + Sbjct: 1736 GEPKK--APMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWHRISPSQKDYYKKL 1897 Query: 63 AKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 A+ + Y + T++ + + +K+ N+ KR +A + +PK+ + S Sbjct: 1898 AEDQQRVYRTQFDTWMKGLSSQDRAAYKEQNSNKRKSTAK-IQVPVAKPKLVAQ----SK 2062 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 D + + + DD + +K E +D + + D+ + G E Sbjct: 2063 SDDDDEDDDDDEDEDDDDDEDEDK------EDSSEDGDSSESSSDEDS-EDG---EENED 2212 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 ++ EE+EDEE+++D+ E D D Sbjct: 2213 EEGEEDEDEEEDDDDNESGSSSSSSSSADSSD 2308 Score = 93 (32.7 bits), Expect = 0.88, P = 0.59 Identities = 26/86 (30%), Positives = 44/86 (51%), Frame = +2 Query: 130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + W ++ D+ Y+++ + K K I AK K A K + +E+E Sbjct: 1934 DTWMKGLSSQDRAAYKEQNSN-KRKSTAKIQVPVAKPKLVAQSKS--DDDDEDDDDDEDE 2104 Query: 189 DEEDEEDEEEEEDEEDEDEEE---DDDDE 214 D++D+EDE++E+ ED D E D+D E Sbjct: 2105 DDDDDEDEDKEDSSEDGDSSESSSDEDSE 2191 Score = 84 (29.6 bits), Expect = 9.2, P = 1.0 Identities = 25/95 (26%), Positives = 47/95 (49%), Frame = +2 Query: 130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + W ++ D+ Y+++ + K K I AK K A K E ++E++ Sbjct: 1934 DTWMKGLSSQDRAAYKEQNSN-KRKSTAKIQVPVAKPKLVAQSKSDDDDEDDDDDEDEDD 2110 Query: 189 DEEDEEDEEEEE----------DEEDEDEEEDDDDE 214 D++++ED+E+ DE+ ED EE++D+E Sbjct: 2111 DDDEDEDKEDSSEDGDSSESSSDEDSEDGEENEDEE 2218 Score = 76 (26.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11 Identities = 19/61 (31%), Positives = 31/61 (50%), Frame = +2 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED------------DDD 213 K D+++ G S + E+ E+ EDEE EE+E++EED+D+ E D Sbjct: 2132 KEDSSEDGDSSESSSDEDSEDGEENEDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSDS 2311 Query: 214 E 214 + Sbjct: 2312 D 2314 Score = 71 (25.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11 Identities = 20/63 (31%), Positives = 32/63 (50%), Frame = +2 Query: 166 KPDAAKKG---VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE------------DEEED 210 K D+++ G +++ + EE EDEE EEDE+EEED++D D + Sbjct: 2132 KEDSSEDGDSSESSSDEDSEDGEENEDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSDS 2311 Query: 211 DDD 213 D + Sbjct: 2312 DSN 2320 >X97906 V.faba mRNA for transcription factor containing HMG-box Length = 2270 Plus Strand HSPs: Score = 209 (73.6 bits), Expect = 3.6e-15, P = 3.6e-15 Identities = 48/131 (36%), Positives = 75/131 (57%), Frame = +2 Query: 32 DASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDP 91 D+ + S+ S+ E K AK++ K + +KA ++ + + K + KKK KDP Sbjct: 1550 DSGADVSDASQSGGETEKP--AKKEPKKDLSSKASSSKKKSKDADVDGVKKKQKKK-KDP 1720 Query: 92 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 151 NAPKR S F F R +K +PG+S DV + LGE W N +A++K+PYE KA K Sbjct: 1721 NAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADK 1900 Query: 152 EKYEKDIAAYR 162 ++Y+ +I+ Y+ Sbjct: 1901 KRYKDEISGYK 1933 Score = 153 (53.9 bits), Expect = 2.2e-08, P = 2.2e-08 Identities = 31/80 (38%), Positives = 48/80 (60%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S + FF Q RE KK +P ++F++ + E+WK +SA+EK +E Sbjct: 1709 KKDPNAPKRALSGFMFFSQMERENLKKTNP--GISFTDVGRVLGEKWKNLSAEEKEPYEA 1882 Query: 62 MAKADKARYEREMKTYIPPK 81 A+ADK RY+ E+ Y P+ Sbjct: 1883 KAQADKKRYKDEISGYKNPQ 1942 >M95912 Saccharomyces cerevisiae N-acetyltransferase (MAK) complete cds; Length = 1780 Minus Strand HSPs: Score = 206 (72.5 bits), Expect = 6.3e-15, P = 6.3e-15 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = -1 Query: 74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133 M T PK T +K KDPNAPKR SA+ F +E R ++ E+P ++ G V KKLGE W Sbjct: 1420 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 1241 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 ++KQPYE KA K++YE + Y A Sbjct: 1240 ALTPEEKQPYEAKAQADKKRYESEKELYNA 1151 Score = 152 (53.5 bits), Expect = 2.9e-08, P = 2.9e-08 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = -1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF R+ + ++PD + F + KK E+WK ++ +EK +E Sbjct: 1378 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 1205 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 1204 KAQADKKRYESEKELY 1157 >X15318 Yeast NHPB gene for nonhistone protein Length = 900 Plus Strand HSPs: Score = 198 (69.7 bits), Expect = 9.4e-15, P = 9.4e-15 Identities = 39/92 (42%), Positives = 55/92 (59%), Frame = +1 Query: 72 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 +E K PK T ++ KDPNAPKR SA+ F +E R ++ E+P ++ G V + LGE Sbjct: 343 KEAKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGER 522 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 W A++KQPYE KA K++YE + Y A Sbjct: 523 WKALTAEEKQPYESKAQADKKRYESEKELYNA 618 Score = 151 (53.2 bits), Expect = 2.3e-08, P = 2.3e-08 Identities = 30/76 (39%), Positives = 45/76 (59%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF R+ + ++PD V F + + ERWK ++A+EK +E Sbjct: 391 KKDPNAPKRGLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYES 564 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 565 KAQADKKRYESEKELY 612 >Z49219;U00094 S.cerevisiae chromosome XVI cosmid 9499. Length = 43,776 Plus Strand HSPs: Score = 114 (40.1 bits), Expect = 0.0039, P = 0.0039 Identities = 31/139 (22%), Positives = 68/139 (48%), Frame = +1 Query: 70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121 Y R+ + K ++ +P + PK RP +AF LF Y + E G+ I Sbjct: 27499 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 27678 Query: 122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 +++K +G W +DK +E A K K ++E+ Y+ K + KK ++ E Sbjct: 27679 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKPVRKSKKKQLLLKEIE 27858 Query: 181 KKKKEEEEDEEDEEDEEEE 199 +++++++++++ ++ + + Sbjct: 27859 QQQQQQQKEQQQQKQSQPQ 27915 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011 Identities = 36/139 (25%), Positives = 70/139 (50%), Frame = +1 Query: 70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121 Y R+ + K ++ +P + PK RP +AF LF Y + E G+ I Sbjct: 27499 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 27678 Query: 122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 +++K +G W +DK +E A K K ++E+ Y K KP V K++K Sbjct: 27679 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEY--KYKP------VRKSKKK 27834 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDE 207 + +E E ++ ++ +E+++ ++ + + Sbjct: 27835 QLLLKEIEQQQQQQQKEQQQQKQSQPQ 27915 Minus Strand HSPs: Score = 206 (72.5 bits), Expect = 1.2e-14, P = 1.2e-14 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = -3 Query: 74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133 M T PK T +K KDPNAPKR SA+ F +E R ++ E+P ++ G V KKLGE W Sbjct: 13837 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 13658 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 ++KQPYE KA K++YE + Y A Sbjct: 13657 ALTPEEKQPYEAKAQADKKRYESEKELYNA 13568 Score = 152 (53.5 bits), Expect = 4.4e-08, P = 4.4e-08 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = -3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF R+ + ++PD + F + KK E+WK ++ +EK +E Sbjct: 13795 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 13622 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 13621 KAQADKKRYESEKELY 13574 >X59863 X.laevis xUBFalpha1 mRNA for upstream binding factor 2 Length = 2470 Plus Strand HSPs: Score = 181 (63.7 bits), Expect = 3.7e-12, P = 3.7e-12 Identities = 55/185 (29%), Positives = 87/185 (47%), Frame = +3 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTY--IPPKGETKKKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P KK K PK+ P + + F Sbjct: 1566 WLNMEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKKAPMNGYQKF 1745 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE--------- 155 E GE L + + ++G W+ + K Y+K A + Y Sbjct: 1746 SQELLSN--GELNHLPLKERMAEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDTWMKG 1919 Query: 156 ---KDIAAYRAKG--KPDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDED 206 +D AAY+ + K + K + KSK K +++ED+ED+EDEE+++D++DED Sbjct: 1920 LSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDDDDED 2099 Query: 207 EEEDDDD 213 +E+ +D Sbjct: 2100 KEDSSED 2120 Score = 143 (50.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14 Identities = 40/184 (21%), Positives = 87/184 (47%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P+ P+ ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ Sbjct: 507 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQ 680 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + +K +ER M + + + K + P++P + L+ + R H S Sbjct: 681 DFQREKQDFERNMAKFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 860 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 D+ LG+ W+ + + KA + +++YE + Y K + ++G+ ++ + Sbjct: 861 KDIKDALGKQWSQLPDKKRLKWIHKALEQRKQYEGVMREYMQKHPELNITEEGITRSTLT 1040 Query: 181 KKKKE 185 K +++ Sbjct: 1041 KAERQ 1055 Score = 140 (49.3 bits), Expect = 2.2e-06, P = 2.2e-06 Identities = 48/179 (26%), Positives = 86/179 (48%), Frame = +3 Query: 42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP-SA 100 KK W +A+++ ++E R +M++ P KK K PK+ P + Sbjct: 1581 KKEKIMWIKKAAEDQKRYE--------RELSDMRS-TPAPTTAGKKVKFLGEPKKAPMNG 1733 Query: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE----- 155 + F E GE L + + ++G W+ + K Y+K A + Y Sbjct: 1734 YQKFSQELLSN--GELNHLPLKERMAEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDT 1907 Query: 156 -------KDIAAYRAKGKPDAAKKGVVKAEKSKKK----KEEEEDEEDEEDEEEEEDEED 204 +D AAY+ + ++A SK K + ++DE+DE+DE+EE+D++D Sbjct: 1908 WMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDD 2087 Query: 205 EDEEEDDDDE 214 +DE+++D E Sbjct: 2088 DDEDKEDSSE 2117 Score = 125 (44.0 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08 Identities = 42/152 (27%), Positives = 71/152 (46%), Frame = +3 Query: 37 FSEFS-KKCSERWKTMSAKEKGKFEDMAKA--DKARYEREMKTYIPPKGETKKKFKDPNA 93 F +S C ++W +S E KF + + D + R P KG KK K P Sbjct: 369 FKHYSGSMCRQKWMEIS-NEVRKFRTLTELILDADEHVRH-----PYKG--KKLKKHPEF 524 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153 PK+P + +F F E R K HP +S D+ K L + + K Y + + K+ Sbjct: 525 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQD 704 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 +E+++A +R + PD + K++ +K K ++ Sbjct: 705 FERNMAKFREE-HPDLMQNPK-KSDVPEKPKTPQQ 803 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042 Identities = 30/93 (32%), Positives = 52/93 (55%), Frame = +3 Query: 130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182 + + A D ++ Y + +K +D AAY+ + K + K + KSK Sbjct: 1848 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 2027 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD 212 K +++ED+ED+EDEE+++D++DED+E ED D Sbjct: 2028 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGD 2126 Score = 110 (38.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14 Identities = 20/48 (41%), Positives = 33/48 (68%), Frame = +3 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 K D+++ G + S +E+ +E +E ++EE+E+E+DED EEDDDD Sbjct: 2100 KEDSSEDG----DSSDSSSDEDSEEGEENEDEEDEEEDDEDNEEDDDD 2231 Score = 110 (38.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14 Identities = 22/49 (44%), Positives = 36/49 (73%), Frame = +3 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K D+++ G + S ++ EE EE+E++E+EEED+ED +EE+DDD+E Sbjct: 2100 KEDSSEDG--DSSDSSSDEDSEEGEENEDEEDEEEDDED-NEEDDDDNE 2237 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035 Identities = 32/101 (31%), Positives = 54/101 (53%), Frame = +3 Query: 130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182 + + A D ++ Y + +K +D AAY+ + K + K + KSK Sbjct: 1848 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 2027 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD------DE 214 K +++ED+ED+EDEE+++D++DED+E ED D DE Sbjct: 2028 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGDSSDSSSDE 2150 Score = 103 (36.3 bits), Expect = 0.061, P = 0.059 Identities = 31/108 (28%), Positives = 47/108 (43%), Frame = +3 Query: 108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK--QPYEKKAAKLKEKYEKDIAAYRAKG 165 YR + GLS D A + N + K P K ++ K + D + Sbjct: 1887 YRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDED 2066 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 + D E S + + + DE+ EE EE+E++EDEEEDD+D Sbjct: 2067 EEDDDDDDDEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEEDDED 2210 Score = 93 (32.7 bits), Expect = 0.83, P = 0.56 Identities = 23/86 (26%), Positives = 41/86 (47%), Frame = +3 Query: 130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + W + D+ Y+++ K K I A +K K K + + EE++ Sbjct: 1902 DTWMKGLSTQDRAAYKEQNTN-KRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDD 2078 Query: 189 DEEDEEDEEEE-EDEEDEDEEEDDDDE 214 D++D+ED+E+ ED + D D+D E Sbjct: 2079 DDDDDEDKEDSSEDGDSSDSSSDEDSE 2159 Score = 90 (31.7 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08 Identities = 42/187 (22%), Positives = 82/187 (43%), Frame = +3 Query: 2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51 K D P+KP+ + + R+ + K H DAS +S+ K +W Sbjct: 765 KSDVPEKPK---TPQQLWYNHERKVYLKLHADASTKDIKDALGKQWSQLPDKKRLKWIHK 935 Query: 52 SAKEKGKFED-----MAKADKARYERE---MKTYIPPKGETKKKFKDPNAPKRPPSAFFL 103 + +++ ++E M K + E T + + K KF D K PP+++ + Sbjct: 936 ALEQRKQYEGVMREYMQKHPELNITEEGITRSTLTKAERQLKDKF-DGRPTKPPPNSYSM 1112 Query: 104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 +C+E +K + P + + W + +K Y KK + K+ YE ++ + Sbjct: 1113 YCAELMANMK-DVPST---ERMVLCSQRWKLLSQKEKDAYHKKCEQRKKDYEVELMRF-L 1277 Query: 164 KGKPDAAKKGVVKAEK 179 + P+ ++ V+ EK Sbjct: 1278 ENLPEEEQQRVLAEEK 1325 Score = 82 (28.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11 Identities = 23/61 (37%), Positives = 32/61 (52%), Frame = +3 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEEE-----------DDD 212 K D+++ G S + EE E+ EDEEDEEE E++EED+D+ E D Sbjct: 2100 KEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEEDDEDNEEDDDDNESGSSSSSSSSADSS 2279 Query: 213 D 213 D Sbjct: 2280 D 2282 Score = 79 (27.8 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07 Identities = 42/162 (25%), Positives = 73/162 (45%), Frame = +3 Query: 25 EHKKKHPDASVNFSEFSKKC-SERWKTMSAKEK--GKFEDMAKADKARYEREMKTYIPPK 81 E +KK D V F + E + + A+EK G ++ E + + Sbjct: 1233 EQRKK--DYEVELMRFLENLPEEEQQRVLAEEKMVGMKRKRTNTPASKMATEDAAKVKSR 1406 Query: 82 -GET-KKKFKDPNA--PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM---WNN 134 G+ KKK + A P+ P +A + ++ + G++ D AK L M W N Sbjct: 1407 SGQADKKKAAEERAKLPETPKTAEEI----WQQSVIGDYLARFKNDRAKALKVMEATWLN 1574 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 +K + KKAA+ +++YE++++ R+ P A K V + KK Sbjct: 1575 MEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKK 1718 Score = 73 (25.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10 Identities = 12/28 (42%), Positives = 24/28 (85%), Frame = +3 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDE-E 203 +E+ ++ ++EE++EED+ED EE++D+ E Sbjct: 2154 SEEGEENEDEEDEEEDDEDNEEDDDDNE 2237 Score = 67 (23.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10 Identities = 13/47 (27%), Positives = 28/47 (59%), Frame = +3 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDE----------DEEEDDDD 213 +E+ ++ ++EE++EED+ED EE++D+ + D + D + Sbjct: 2154 SEEGEENEDEEDEEEDDEDNEEDDDDNESGSSSSSSSSADSSDSDSN 2294 >U00049 Caenorhabditis elegans cosmid C18F10. Length = 24,936 Plus Strand HSPs: Score = 203 (71.5 bits), Expect = 2.4e-14, P = 2.4e-14 Identities = 39/73 (53%), Positives = 51/73 (69%), Frame = +3 Query: 4 DPKKP--RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 D KP RGK S Y FFV+ C EEHKKK+P+ +V +E SKKCSE+WKTM EK +F + Sbjct: 24573 DMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE 24752 Query: 62 MAKADKARYEREM 74 +A+ D RY+ E+ Sbjct: 24753 LAQKDAERYQAEV 24791 Score = 88 (31.0 bits), Expect = 3.6, P = 0.97 Identities = 20/71 (28%), Positives = 36/71 (50%), Frame = +3 Query: 89 KDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 K P K P FF+ C E K K + + + +++KK E W D+K+ + + A Sbjct: 24582 KPPVRGKTSPYGFFVKMCYEEHKK-KYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELA 24758 Query: 148 AKLKEKYEKDIA 159 K E+Y+ +++ Sbjct: 24759 QKDAERYQAEVS 24794 >X68408 D.melanogaster SSRP1 mRNA Length = 2384 Plus Strand HSPs: Score = 201 (70.8 bits), Expect = 2.7e-14, P = 2.7e-14 Identities = 59/159 (37%), Positives = 85/159 (53%), Frame = +3 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KEK K E K +K E+E +T P +KKK KD PKR +AF L+ ++ R IK Sbjct: 1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844 Query: 114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR--AKGKPDAAK 171 E+PG+ + ++AKK GEMW DK +E AAK K++Y ++ Y+ A G D K Sbjct: 1845 RENPGIKVTEIAKKGGEMWKELK--DKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEK 2018 Query: 172 KGVV----KAEKSKKKKEEEEDEEDEEDEE-EEEDEEDEDEEEDDD 212 G K E S KK + E ++D D+E+D++ Sbjct: 2019 GGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 2156 Score = 175 (61.6 bits), Expect = 1.6e-11, P = 1.6e-11 Identities = 55/170 (32%), Positives = 85/170 (50%), Frame = +3 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KEK K E K +K E+E +T P +KKK KD PKR +AF L+ ++ R IK Sbjct: 1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844 Query: 114 GEHPGLSIGDVAKKLGEMWN---------NTAADDKQPYEKKAAKLKEKYEKDI------ 158 E+PG+ + ++AKK GEMW + AA DKQ Y + K + D Sbjct: 1845 RENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGG 2024 Query: 159 -AAYRAKGKPDAAKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 ++ + K +P +KK K K+ ++D +DE++ E + + + D D Sbjct: 2025 KSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 2195 Score = 172 (60.5 bits), Expect = 3.4e-11, P = 3.4e-11 Identities = 56/192 (29%), Positives = 90/192 (46%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D KP+ +++ ++ RE K+++P V +E +KK E WK + K+K K+ED Sbjct: 1767 KKDSGKPKRATTAFMLWLNDTRESIKRENPGIKV--TEIAKKGGEMWKEL--KDKSKWED 1934 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 A DK RY EM+ Y P G K + K+ + E P K G Sbjct: 1935 AAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKT-------EPSPSKKANTSGS-- 2087 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 G +K+ ++T++DD++ + + AK K K D A + K K ++ + E S Sbjct: 2088 GFKSKEYISDDDSTSSDDEK--DNEPAKKKSKPPSDGDAKKKKAKSESEPEE--SEEDSN 2255 Query: 182 KKKEEEEDEEDE 193 E+EEDE + Sbjct: 2256 ASDEDEEDEASD 2291 Score = 101 (35.6 bits), Expect = 0.10, P = 0.097 Identities = 52/195 (26%), Positives = 84/195 (43%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKL--- 128 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTE 2051 Query: 129 ---GEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKK 184 + N + + K + Y EKD + K KP + G K +K+K + Sbjct: 2052 PSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPS--DGDAKKKKAKSES 2225 Query: 185 EEEEDEEDEEDEEEEEDEEDED 206 E EE EED +E+E++E D Sbjct: 2226 EPEESEEDSNASDEDEEDEASD 2291 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25 Identities = 52/195 (26%), Positives = 83/195 (42%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 + K K KE D ++ K A KK ++ KKK+ + + Sbjct: 2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDD 213 E EE EE+ + DEDEE++ D Sbjct: 2223 SEPEESEEDS-NASDEDEEDEASD 2291 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25 Identities = 51/195 (26%), Positives = 83/195 (42%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAE-KSKKKKEEEE 188 + K K KE D ++ K A KK ++ +KKKK + E Sbjct: 2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222 Query: 189 DEEDEEDEEEEEDEEDEDEEEDD 211 E +E +E+ +EDE++E D Sbjct: 2223 SEPEESEEDSNASDEDEEDEASD 2291 Score = 85 (29.9 bits), Expect = 6.7, P = 1.0 Identities = 53/192 (27%), Positives = 82/192 (42%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 + K K KE D ++ K A KK ++ KKK+ + + Sbjct: 2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDDE 214 E EE EE+ + DEDEE DE Sbjct: 2223 SEPEESEEDS-NASDEDEE----DE 2282 >I66611 Sequence 10 from patent US 5670621. Length = 2384 Plus Strand HSPs: Score = 201 (70.8 bits), Expect = 2.7e-14, P = 2.7e-14 Identities = 59/159 (37%), Positives = 85/159 (53%), Frame = +3 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KEK K E K +K E+E +T P +KKK KD PKR +AF L+ ++ R IK Sbjct: 1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844 Query: 114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR--AKGKPDAAK 171 E+PG+ + ++AKK GEMW DK +E AAK K++Y ++ Y+ A G D K Sbjct: 1845 RENPGIKVTEIAKKGGEMWKELK--DKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEK 2018 Query: 172 KGVV----KAEKSKKKKEEEEDEEDEEDEE-EEEDEEDEDEEEDDD 212 G K E S KK + E ++D D+E+D++ Sbjct: 2019 GGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 2156 Score = 175 (61.6 bits), Expect = 1.6e-11, P = 1.6e-11 Identities = 55/170 (32%), Positives = 85/170 (50%), Frame = +3 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KEK K E K +K E+E +T P +KKK KD PKR +AF L+ ++ R IK Sbjct: 1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844 Query: 114 GEHPGLSIGDVAKKLGEMWN---------NTAADDKQPYEKKAAKLKEKYEKDI------ 158 E+PG+ + ++AKK GEMW + AA DKQ Y + K + D Sbjct: 1845 RENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGG 2024 Query: 159 -AAYRAKGKPDAAKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 ++ + K +P +KK K K+ ++D +DE++ E + + + D D Sbjct: 2025 KSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 2195 Score = 172 (60.5 bits), Expect = 3.4e-11, P = 3.4e-11 Identities = 56/192 (29%), Positives = 90/192 (46%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D KP+ +++ ++ RE K+++P V +E +KK E WK + K+K K+ED Sbjct: 1767 KKDSGKPKRATTAFMLWLNDTRESIKRENPGIKV--TEIAKKGGEMWKEL--KDKSKWED 1934 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 A DK RY EM+ Y P G K + K+ + E P K G Sbjct: 1935 AAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKT-------EPSPSKKANTSGS-- 2087 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 G +K+ ++T++DD++ + + AK K K D A + K K ++ + E S Sbjct: 2088 GFKSKEYISDDDSTSSDDEK--DNEPAKKKSKPPSDGDAKKKKAKSESEPEE--SEEDSN 2255 Query: 182 KKKEEEEDEEDE 193 E+EEDE + Sbjct: 2256 ASDEDEEDEASD 2291 Score = 101 (35.6 bits), Expect = 0.10, P = 0.097 Identities = 52/195 (26%), Positives = 84/195 (43%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKL--- 128 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTE 2051 Query: 129 ---GEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKK 184 + N + + K + Y EKD + K KP + G K +K+K + Sbjct: 2052 PSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPS--DGDAKKKKAKSES 2225 Query: 185 EEEEDEEDEEDEEEEEDEEDED 206 E EE EED +E+E++E D Sbjct: 2226 EPEESEEDSNASDEDEEDEASD 2291 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25 Identities = 52/195 (26%), Positives = 83/195 (42%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 + K K KE D ++ K A KK ++ KKK+ + + Sbjct: 2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDD 213 E EE EE+ + DEDEE++ D Sbjct: 2223 SEPEESEEDS-NASDEDEEDEASD 2291 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25 Identities = 51/195 (26%), Positives = 83/195 (42%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAE-KSKKKKEEEE 188 + K K KE D ++ K A KK ++ +KKKK + E Sbjct: 2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222 Query: 189 DEEDEEDEEEEEDEEDEDEEEDD 211 E +E +E+ +EDE++E D Sbjct: 2223 SEPEESEEDSNASDEDEEDEASD 2291 Score = 85 (29.9 bits), Expect = 6.7, P = 1.0 Identities = 53/192 (27%), Positives = 82/192 (42%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R +RE +K T Sbjct: 1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 + K K KE D ++ K A KK ++ KKK+ + + Sbjct: 2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDDE 214 E EE EE+ + DEDEE DE Sbjct: 2223 SEPEESEEDS-NASDEDEE----DE 2282 >X57561 X.laevis xUBF mRNA for RNA polymerase I transcription factor Length = 2208 Plus Strand HSPs: Score = 180 (63.4 bits), Expect = 4.6e-12, P = 4.6e-12 Identities = 55/185 (29%), Positives = 87/185 (47%), Frame = +2 Query: 48 WKTMSAKEKGKFEDMAKADKARYEREMKTY--IPPKGETKKKFKDPNAPKRPP-SAFFLF 104 W M KEK + A D+ RYERE+ P KK K PK+ P + + F Sbjct: 1451 WLNMEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKKAPMNGYQKF 1630 Query: 105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE--------- 155 E GE L + + ++G W+ + K Y+K A + Y Sbjct: 1631 SQELLSN--GELNHLPLKERMVEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDTWMKG 1804 Query: 156 ---KDIAAYRAKG--KPDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDED 206 +D AAY+ + K + K + KSK K +++ED+ED+EDEE+++D++DED Sbjct: 1805 LSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDDDDED 1984 Query: 207 EEEDDDD 213 +E+ +D Sbjct: 1985 KEDSSED 2005 Score = 143 (50.3 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14 Identities = 40/184 (21%), Positives = 87/184 (47%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K P+ P+ ++ Y F R ++ K HP+ S N + +K S+++K + K+K K+ Sbjct: 392 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQ 565 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + +K +ER M + + + K + P++P + L+ + R H S Sbjct: 566 DFQREKQDFERNMAKFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 745 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180 D+ LG+ W+ + + KA + +++YE + Y K + ++G+ ++ + Sbjct: 746 KDIKDALGKQWSQLPDKKRLKWIHKALEQRKQYEGVMREYMQKHPELNITEEGITRSTLT 925 Query: 181 KKKKE 185 K +++ Sbjct: 926 KAERQ 940 Score = 139 (48.9 bits), Expect = 2.8e-06, P = 2.8e-06 Identities = 48/179 (26%), Positives = 86/179 (48%), Frame = +2 Query: 42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP-SA 100 KK W +A+++ ++E R +M++ P KK K PK+ P + Sbjct: 1466 KKEKIMWIKKAAEDQKRYE--------RELSDMRS-TPAPTTAGKKVKFLGEPKKAPMNG 1618 Query: 101 FFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE----- 155 + F E GE L + + ++G W+ + K Y+K A + Y Sbjct: 1619 YQKFSQELLSN--GELNHLPLKERMVEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDT 1792 Query: 156 -------KDIAAYRAKGKPDAAKKGVVKAEKSKKK----KEEEEDEEDEEDEEEEEDEED 204 +D AAY+ + ++A SK K + ++DE+DE+DE+EE+D++D Sbjct: 1793 WMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDD 1972 Query: 205 EDEEEDDDDE 214 +DE+++D E Sbjct: 1973 DDEDKEDSSE 2002 Score = 125 (44.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10 Identities = 42/152 (27%), Positives = 71/152 (46%), Frame = +2 Query: 37 FSEFS-KKCSERWKTMSAKEKGKFEDMAKA--DKARYEREMKTYIPPKGETKKKFKDPNA 93 F +S C ++W +S E KF + + D + R P KG KK K P Sbjct: 254 FKHYSGSMCRQKWMEIS-NEVRKFRTLTELILDADEHVRH-----PYKG--KKLKKHPEF 409 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153 PK+P + +F F E R K HP +S D+ K L + + K Y + + K+ Sbjct: 410 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQD 589 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 +E+++A +R + PD + K++ +K K ++ Sbjct: 590 FERNMAKFREE-HPDLMQNPK-KSDVPEKPKTPQQ 688 Score = 113 (39.8 bits), Expect = 0.0041, P = 0.0041 Identities = 30/93 (32%), Positives = 52/93 (55%), Frame = +2 Query: 130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182 + + A D ++ Y + +K +D AAY+ + K + K + KSK Sbjct: 1733 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 1912 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD 212 K +++ED+ED+EDEE+++D++DED+E ED D Sbjct: 1913 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGD 2011 Score = 107 (37.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14 Identities = 19/48 (39%), Positives = 33/48 (68%), Frame = +2 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 K D+++ G + S +E+ +E +E ++EE+E+++DED EEDDDD Sbjct: 1985 KEDSSEDG----DSSDSSSDEDSEEGEENEDEEDEEDDDEDNEEDDDD 2116 Score = 107 (37.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14 Identities = 21/49 (42%), Positives = 36/49 (73%), Frame = +2 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K D+++ G + S ++ EE EE+E++E+EE+D+ED +EE+DDD+E Sbjct: 1985 KEDSSEDG--DSSDSSSDEDSEEGEENEDEEDEEDDDED-NEEDDDDNE 2122 Score = 105 (37.0 bits), Expect = 0.035, P = 0.034 Identities = 32/101 (31%), Positives = 54/101 (53%), Frame = +2 Query: 130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182 + + A D ++ Y + +K +D AAY+ + K + K + KSK Sbjct: 1733 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 1912 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD------DE 214 K +++ED+ED+EDEE+++D++DED+E ED D DE Sbjct: 1913 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGDSSDSSSDE 2035 Score = 100 (35.2 bits), Expect = 0.13, P = 0.12 Identities = 30/108 (27%), Positives = 47/108 (43%), Frame = +2 Query: 108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK--QPYEKKAAKLKEKYEKDIAAYRAKG 165 YR + GLS D A + N + K P K ++ K + D + Sbjct: 1772 YRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDED 1951 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 + D E S + + + DE+ EE EE+E++EDEE+DD+D Sbjct: 1952 EEDDDDDDDEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEDDDED 2095 Score = 96 (33.8 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13 Identities = 15/32 (46%), Positives = 26/32 (81%), Frame = +2 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 +++ ++ EE EDEEDEED++E+ +E+D+D E Sbjct: 2027 SDEDSEEGEENEDEEDEEDDDEDNEEDDDDNE 2122 Score = 93 (32.7 bits), Expect = 0.81, P = 0.56 Identities = 23/86 (26%), Positives = 41/86 (47%), Frame = +2 Query: 130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 + W + D+ Y+++ K K I A +K K K + + EE++ Sbjct: 1787 DTWMKGLSTQDRAAYKEQNTN-KRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDD 1963 Query: 189 DEEDEEDEEEE-EDEEDEDEEEDDDDE 214 D++D+ED+E+ ED + D D+D E Sbjct: 1964 DDDDDEDKEDSSEDGDSSDSSSDEDSE 2044 Score = 92 (32.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12 Identities = 17/40 (42%), Positives = 27/40 (67%), Frame = +2 Query: 178 EKSKKKKEEEEDEED---EEDEEEEEDEEDEDEEEDDDDE 214 ++ K+ E+ D D +ED EE E+ EDE++EEDDD++ Sbjct: 1976 DEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEDDDED 2095 Score = 91 (32.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12 Identities = 19/39 (48%), Positives = 26/39 (66%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEE-DEEEEEDEEDEDEE-EDDDDE 214 ++ K+ E+ D D DE+ EE EE+EDEE E+DDDE Sbjct: 1976 DEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEDDDE 2092 Score = 90 (31.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07 Identities = 42/187 (22%), Positives = 82/187 (43%), Frame = +2 Query: 2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51 K D P+KP+ + + R+ + K H DAS +S+ K +W Sbjct: 650 KSDVPEKPK---TPQQLWYNHERKVYLKLHADASTKDIKDALGKQWSQLPDKKRLKWIHK 820 Query: 52 SAKEKGKFED-----MAKADKARYERE---MKTYIPPKGETKKKFKDPNAPKRPPSAFFL 103 + +++ ++E M K + E T + + K KF D K PP+++ + Sbjct: 821 ALEQRKQYEGVMREYMQKHPELNITEEGITRSTLTKAERQLKDKF-DGRPTKPPPNSYSM 997 Query: 104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 +C+E +K + P + + W + +K Y KK + K+ YE ++ + Sbjct: 998 YCAELMANMK-DVPST---ERMVLCSQRWKLLSQKEKDAYHKKCEQRKKDYEVELMRF-L 1162 Query: 164 KGKPDAAKKGVVKAEK 179 + P+ ++ V+ EK Sbjct: 1163 ENLPEEEQQRVLAEEK 1210 Score = 83 (29.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05 Identities = 51/197 (25%), Positives = 88/197 (44%), Frame = +2 Query: 3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 G P KP +SY+ + C E V +E CS+RWK +S KEK + Sbjct: 959 GRPTKP--PPNSYSMY---CAELMANMK---DVPSTERMVLCSQRWKLLSQKEKDAYHKK 1114 Query: 63 AKADKARYEREMKTYIP--PKGETKKKFKDPNAP----KRPPSAFFLFCSEYRPKIKGEH 116 + K YE E+ ++ P+ E ++ + KR + +E K+K Sbjct: 1115 CEQRKKDYEVELMRFLENLPEEEQQRVLAEEKMVGMKRKRTNTPASKMATEDAAKVKSRS 1294 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAA-YRAKGKPDAAKK-GV 174 G KK AA+++ + +E +++ + Y A+ K D AK V Sbjct: 1295 -----GQADKK-------KAAEERAKLPETPKTAEEIWQQSVIGDYLARFKNDRAKALKV 1438 Query: 175 VKAE-KSKKKKEE----EEDEEDEEDEEEE 199 ++A + +KKE+ ++ ED++ E E Sbjct: 1439 MEATWLNMEKKEKIMWIKKAAEDQKRYERE 1528 Score = 81 (28.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11 Identities = 17/47 (36%), Positives = 28/47 (59%), Frame = +2 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------DDDD 213 +++ ++ EE EDEEDEED++E+ +E+D+D E D D Sbjct: 2027 SDEDSEEGEENEDEEDEEDDDEDNEEDDDDNESGSSSSSSSSADSSD 2167 Score = 79 (27.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06 Identities = 42/162 (25%), Positives = 73/162 (45%), Frame = +2 Query: 25 EHKKKHPDASVNFSEFSKKC-SERWKTMSAKEK--GKFEDMAKADKARYEREMKTYIPPK 81 E +KK D V F + E + + A+EK G ++ E + + Sbjct: 1118 EQRKK--DYEVELMRFLENLPEEEQQRVLAEEKMVGMKRKRTNTPASKMATEDAAKVKSR 1291 Query: 82 -GET-KKKFKDPNA--PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM---WNN 134 G+ KKK + A P+ P +A + ++ + G++ D AK L M W N Sbjct: 1292 SGQADKKKAAEERAKLPETPKTAEEI----WQQSVIGDYLARFKNDRAKALKVMEATWLN 1459 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 +K + KKAA+ +++YE++++ R+ P A K V + KK Sbjct: 1460 MEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKK 1603 Score = 70 (24.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10 Identities = 16/51 (31%), Positives = 29/51 (56%), Frame = +2 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE--------------EDDDD 213 +++ ++ EE EDEEDEED++E+ +E+D+D E + D + Sbjct: 2027 SDEDSEEGEENEDEEDEEDDDEDNEEDDDDNESGSSSSSSSSADSSDSDSN 2179 >Z35959;Y13134 S.cerevisiae chromosome II reading frame ORF YBR090c Length = 1378 Minus Strand HSPs: Score = 198 (69.7 bits), Expect = 3.5e-14, P = 3.5e-14 Identities = 39/92 (42%), Positives = 55/92 (59%), Frame = -3 Query: 72 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 +E K PK T ++ KDPNAPKR SA+ F +E R ++ E+P ++ G V + LGE Sbjct: 698 KEAKQPKEPKKRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDVTFGQVGRILGER 519 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 W A++KQPYE KA K++YE + Y A Sbjct: 518 WKALTAEEKQPYESKAQADKKRYESEKELYNA 423 Score = 155 (54.6 bits), Expect = 4.9e-09, P = 4.9e-09 Identities = 30/76 (39%), Positives = 46/76 (60%), Frame = -3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ ++S+Y FF R+ + ++PD V F + + ERWK ++A+EK +E Sbjct: 650 KKDPNAPKRRLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYES 477 Query: 62 MAKADKARYEREMKTY 77 A+ADK RYE E + Y Sbjct: 476 KAQADKKRYESEKELY 429 >L08825 Drosophila melanogaster single-stranded recognition protein (SSRP) Length = 2443 Plus Strand HSPs: Score = 196 (69.0 bits), Expect = 9.3e-14, P = 9.3e-14 Identities = 58/159 (36%), Positives = 84/159 (52%), Frame = +1 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KEK K E K +K E+E +T P +KKK KD PKR +AF L+ ++ R K Sbjct: 1669 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESYK 1827 Query: 114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR--AKGKPDAAK 171 E+PG+ + ++AKK GEMW DK +E AAK K++Y ++ Y+ A G D K Sbjct: 1828 RENPGIKVTEIAKKGGEMWKELK--DKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEK 2001 Query: 172 KGVV----KAEKSKKKKEEEEDEEDEEDEE-EEEDEEDEDEEEDDD 212 G K E S KK + E ++D D+E+D++ Sbjct: 2002 GGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 2139 Score = 177 (62.3 bits), Expect = 1.0e-11, P = 1.0e-11 Identities = 56/192 (29%), Positives = 91/192 (47%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K D KP+ +++ ++ RE +K+++P V +E +KK E WK + K+K K+ED Sbjct: 1750 KKDSGKPKRATTAFMLWLNDTRESYKRENPGIKV--TEIAKKGGEMWKEL--KDKSKWED 1917 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 A DK RY EM+ Y P G K + K+ + E P K G Sbjct: 1918 AAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKT-------EPSPSKKANTSGS-- 2070 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181 G +K+ ++T++DD++ + + AK K K D A + K K ++ + E S Sbjct: 2071 GFKSKEYISDDDSTSSDDEK--DNEPAKKKSKPPSDGDAKKKKAKSESEPEE--SEEDSN 2238 Query: 182 KKKEEEEDEEDE 193 E+EEDE + Sbjct: 2239 ASDEDEEDEASD 2274 Score = 170 (59.8 bits), Expect = 5.6e-11, P = 5.6e-11 Identities = 54/170 (31%), Positives = 84/170 (49%), Frame = +1 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 KEK K E K +K E+E +T P +KKK KD PKR +AF L+ ++ R K Sbjct: 1669 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESYK 1827 Query: 114 GEHPGLSIGDVAKKLGEMWN---------NTAADDKQPYEKKAAKLKEKYEKDI------ 158 E+PG+ + ++AKK GEMW + AA DKQ Y + K + D Sbjct: 1828 RENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGG 2007 Query: 159 -AAYRAKGKPDAAKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 ++ + K +P +KK K K+ ++D +DE++ E + + + D D Sbjct: 2008 KSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 2178 Score = 105 (37.0 bits), Expect = 0.035, P = 0.035 Identities = 53/195 (27%), Positives = 84/195 (43%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R Y+RE +K T Sbjct: 1690 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVT 1854 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1855 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2028 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 + K K KE D ++ K A KK ++ KKK+ + + Sbjct: 2029 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2205 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDD 213 E EE EE+ + DEDEE++ D Sbjct: 2206 SEPEESEEDS-NASDEDEEDEASD 2274 Score = 105 (37.0 bits), Expect = 0.035, P = 0.035 Identities = 52/195 (26%), Positives = 84/195 (43%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R Y+RE +K T Sbjct: 1690 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVT 1854 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1855 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2028 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAE-KSKKKKEEEE 188 + K K KE D ++ K A KK ++ +KKKK + E Sbjct: 2029 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2205 Query: 189 DEEDEEDEEEEEDEEDEDEEEDD 211 E +E +E+ +EDE++E D Sbjct: 2206 SEPEESEEDSNASDEDEEDEASD 2274 Score = 93 (32.7 bits), Expect = 0.83, P = 0.56 Identities = 54/192 (28%), Positives = 83/192 (43%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76 +E+ +KKH + E +KK S++ K ++ M + R Y+RE +K T Sbjct: 1690 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVT 1854 Query: 77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 I KG E K K K +A + + Y+P+ G+ G +KK Sbjct: 1855 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2028 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 + K K KE D ++ K A KK ++ KKK+ + + Sbjct: 2029 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2205 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDDE 214 E EE EE+ + DEDEE DE Sbjct: 2206 SEPEESEEDS-NASDEDEE----DE 2265 >U80736 Homo sapiens CAGF9 mRNA, partial cds. Length = 2224 Plus Strand HSPs: Score = 184 (64.8 bits), Expect = 1.7e-12, P = 1.7e-12 Identities = 34/79 (43%), Positives = 53/79 (67%), Frame = +1 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144 KKK KDPN P++P SA+ LF + + IKG++P + G+V+K + MW++ + KQ Y+ Sbjct: 1 KKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYK 180 Query: 145 KKAAKLKEKYEKDIAAYRA 163 +K K++Y K +AAYRA Sbjct: 181 RKTEAAKKEYLKALAAYRA 237 Score = 98 (34.5 bits), Expect = 0.22, P = 0.20 Identities = 21/76 (27%), Positives = 41/76 (53%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP +P+ +S+YA F + + K ++P+A+ F E SK + W ++ ++K ++ Sbjct: 10 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLGEEQKQVYKR 183 Query: 62 MAKADKARYEREMKTY 77 +A K Y + + Y Sbjct: 184 KTEAAKKEYLKALAAY 231 >X80461 M.musculus HMG1-R-145 gene Length = 196 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12 Identities = 25/46 (54%), Positives = 34/46 (73%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSER 47 +GDPKKPRG MS YAFFVQTCREEH++ ++ S+ S + ++R Sbjct: 7 RGDPKKPRGTMSLYAFFVQTCREEHRRD-TQMLLSTSQSSPRSAQR 141 Score = 127 (44.7 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 22/34 (64%), Positives = 28/34 (82%), Frame = +3 Query: 27 KKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 +++HPDASVNFSE SKKCSERWKT K++G + Sbjct: 81 QERHPDASVNFSELSKKCSERWKTCLLKKRGNLK 182 Score = 66 (23.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12 Identities = 14/15 (93%), Positives = 14/15 (93%), Frame = +2 Query: 51 MSAKEKGKFEDMAKA 65 MSAKEKGKFEDMA A Sbjct: 152 MSAKEKGKFEDMAIA 196 >L31630 Plasmodium falciparum (clone: D10) high mobility group protein, Length = 392 Plus Strand HSPs: Score = 171 (60.2 bits), Expect = 1.6e-11, P = 1.6e-11 Identities = 36/79 (45%), Positives = 48/79 (60%), Frame = +1 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS--IGDVAKKLGEMWNNTAADDKQP 142 +KK KDP+APKR SA+ F E R +I + P LS + V K +GE WN +K P Sbjct: 112 RKKKKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAP 291 Query: 143 YEKKAAKLKEKYEKDIAAY 161 +EKKA + K +YEK+ A Y Sbjct: 292 FEKKAQEDKLRYEKEKAEY 348 Score = 143 (50.3 bits), Expect = 1.5e-08, P = 1.5e-08 Identities = 29/76 (38%), Positives = 39/76 (51%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF + R E K P+ S + + K E W + KEK FE Sbjct: 121 KKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEK 300 Query: 62 MAKADKARYEREMKTY 77 A+ DK RYE+E Y Sbjct: 301 KAQEDKLRYEKEKAEY 348 >AF000195 Caenorhabditis elegans cosmid C32F10. Length = 30,102 Minus Strand HSPs: Score = 134 (47.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11 Identities = 34/89 (38%), Positives = 51/89 (57%), Frame = -1 Query: 55 EKGKFEDMAKADKA-RYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 E K E K +K + E+ +K KG KK KDPN PKR +A+ ++ + R +K Sbjct: 12183 EPKKKESKEKKNKREKKEKPVKEKAVKKG---KKTKDPNEPKRATTAYIIWFNANRNSMK 12013 Query: 114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 + G ++GDVAKK G W + +ADDK+ + Sbjct: 12012 ED--GDTLGDVAKKAGAKWKSMSADDKKVF 11929 Score = 100 (35.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11 Identities = 25/76 (32%), Positives = 37/76 (48%), Frame = -1 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 WN+ AA DK YE A++KE Y+K+ P K K K KE D + Sbjct: 11793 WNDKAAQDKARYE---AEMKE-YKKNGGGVEKASGPSTKKSSDQSPGKQFKSKEHISDTD 11626 Query: 192 DEEDEEEEEDEEDEDE 207 D +D+E + ++DE + Sbjct: 11625 DSDDDEPLKAKKDESD 11578 Score = 100 (35.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11 Identities = 27/83 (32%), Positives = 39/83 (46%), Frame = -1 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 WN+ AA DK YE A++KE Y+K+ P K K K KE D + Sbjct: 11793 WNDKAAQDKARYE---AEMKE-YKKNGGGVEKASGPSTKKSSDQSPGKQFKSKEHISDTD 11626 Query: 192 DEEDEEE---EEDEEDEDEEEDDDDE 214 D +D+E ++DE D E + + Sbjct: 11625 DSDDDEPLKAKKDESDAASESSGESD 11548 Score = 68 (23.9 bits), Expect = 0.0025, Sum P(2) = 0.0025 Identities = 16/56 (28%), Positives = 27/56 (48%), Frame = -1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 59 DP +P+ ++Y + R K+ D + +KK +WK+MSA +K F Sbjct: 12084 DPNEPKRATTAYIIWFNANRNSMKE---DGDT-LGDVAKKAGAKWKSMSADDKKVF 11929 >M73820 Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome Length = 12,544 Plus Strand HSPs: Score = 159 (56.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10 Identities = 31/71 (43%), Positives = 49/71 (69%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 EKK + + + + + K K KK K +K KKKK++EE+EE+EE+EEEEE+EE Sbjct: 8201 EKKKKRRRRRRRRRRKEKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEE 8380 Query: 204 DEDEEEDDDDE 214 +E+EEE++++E Sbjct: 8381 EEEEEEEEEEE 8413 Score = 157 (55.3 bits), Expect = 1.8e-09, P = 1.8e-09 Identities = 31/69 (44%), Positives = 47/69 (68%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK + + + + + K K KK K +K KKKKEEEE+EE+EE+EEEEE+EE Sbjct: 8207 KKKRRRRRRRRRRKEKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEE 8386 Query: 204 DEDEEEDDD 212 +E+EEE+++ Sbjct: 8387 EEEEEEEEE 8413 Score = 145 (51.0 bits), Expect = 5.7e-07, P = 5.7e-07 Identities = 29/71 (40%), Positives = 47/71 (66%), Frame = +2 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +K+ ++ + + + EK + K K KK K +K K+++EEEE+EE+EE+EEE Sbjct: 8201 EKKKKRRRRRRRRRRKEKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEE 8380 Query: 199 EEDEEDEDEEE 209 EE+EE+E+EEE Sbjct: 8381 EEEEEEEEEEE 8413 Score = 40 (14.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10 Identities = 9/22 (40%), Positives = 12/22 (54%), Frame = +1 Query: 110 PKIKGEHPGLSIGDVAKKLGEM 131 P+ G H G S+GD LG + Sbjct: 4180 PRRGGVHRGHSLGDSEGLLGHL 4245 Minus Strand HSPs: Score = 99 (34.8 bits), Expect = 0.20, P = 0.18 Identities = 28/82 (34%), Positives = 42/82 (51%), Frame = -2 Query: 128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187 L E W D K P KA D + +P+ K +V+ ++ EE Sbjct: 11484 LQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN--KGSIVRPNLREEGVVEE 11311 Query: 188 EDEEDEEDEEEEEDEEDEDEEE 209 E+E++EE+EEE+E EE+E+EEE Sbjct: 11310 EEEQEEEEEEEKEKEEEEEEEE 11245 Score = 94 (33.1 bits), Expect = 0.74, P = 0.52 Identities = 27/83 (32%), Positives = 42/83 (50%), Frame = -2 Query: 128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187 L E W D K P KA D + +P+ KG + +++ E Sbjct: 11484 LQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN---KGSIVRPNLREEGVVE 11314 Query: 188 EDEEDEEDEEEEEDEEDEDEEED 210 E+EE EE+EEEE+++E+E+EEE+ Sbjct: 11313 EEEEQEEEEEEEKEKEEEEEEEE 11245 Score = 90 (31.7 bits), Expect = 2.1, P = 0.88 Identities = 18/43 (41%), Positives = 33/43 (76%), Frame = -2 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 +P+ ++GVV E+ ++++EEEE+E+++E+EEEEE+ EE Sbjct: 11346 RPNLREEGVV--EEEEEQEEEEEEEKEKEEEEEEEEPSCLTEE 11224 Score = 87 (30.6 bits), Expect = 4.6, P = 0.99 Identities = 16/29 (55%), Positives = 24/29 (82%), Frame = -2 Query: 186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EE E+EE++EEEE+EE E EEE++++E Sbjct: 11331 EEGVVEEEEEQEEEEEEEKEKEEEEEEEE 11245 >M64933 Mouse nonfunctional sex-limited protein, and cytochrome P-450 Length = 26,307 Plus Strand HSPs: Score = 162 (57.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10 Identities = 31/53 (58%), Positives = 42/53 (79%), Frame = +1 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 R K K KK K +K KKKKEEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 20473 RRKEKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 20631 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 29/65 (44%), Positives = 44/65 (67%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 EKK + + + EK + K K KK K E+ ++++EEEE+EE+EE+EEEEE+EE Sbjct: 20449 EKKRRRRRRRKEKKKKKKKKKKKKKKKKKK--KEEEEEEEEEEEEEEEEEEEEEEEEEEE 20622 Query: 204 DEDEE 208 +E+EE Sbjct: 20623 EEEEE 20637 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023 Identities = 19/36 (52%), Positives = 33/36 (91%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 EK + ++EEEE+EE++ +EEEEE+EE+E+EEE++++ Sbjct: 20433 EKGEGREEEEEEEEEKGEEEEEEEEEEEEEEEEEEE 20540 Score = 40 (14.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10 Identities = 9/22 (40%), Positives = 12/22 (54%), Frame = +3 Query: 110 PKIKGEHPGLSIGDVAKKLGEM 131 P+ G H G S+GD LG + Sbjct: 16443 PRRGGVHRGHSLGDSEGLLGHL 16508 Minus Strand HSPs: Score = 105 (37.0 bits), Expect = 0.042, P = 0.041 Identities = 31/100 (31%), Positives = 49/100 (49%), Frame = -3 Query: 112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171 ++ PG G L E W D K P KA D + +P+ K Sbjct: 23755 LESNPPGT--GPSPSFLQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN--K 23588 Query: 172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 +V+ ++ EEE+E++EE+EEE+E EE+E+EEE++ Sbjct: 23587 GSIVRPNLKEEGVVEEEEEQEEEEEEEKEKEEEEEEEEEE 23468 Score = 104 (36.6 bits), Expect = 0.055, P = 0.054 Identities = 32/99 (32%), Positives = 50/99 (50%), Frame = -3 Query: 112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171 ++ PG G L E W D K P KA D + +P+ K Sbjct: 23755 LESNPPGT--GPSPSFLQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN--K 23588 Query: 172 KGVVKAE-KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +V+ K + EEEE++E+EE+EE+E++EE+E+EEE+ Sbjct: 23587 GSIVRPNLKEEGVVEEEEEQEEEEEEEKEKEEEEEEEEEE 23468 Score = 102 (35.9 bits), Expect = 0.093, P = 0.089 Identities = 19/43 (44%), Positives = 33/43 (76%), Frame = -3 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 +P+ ++GVV+ E+ ++++EEEE E++EE+EEEEE+ EE Sbjct: 23575 RPNLKEEGVVEEEEEQEEEEEEEKEKEEEEEEEEEEPSCLTEE 23447 Score = 96 (33.8 bits), Expect = 0.44, P = 0.36 Identities = 17/31 (54%), Positives = 27/31 (87%), Frame = -3 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KEE EE+EE EEEEE+E++++EEE++++E Sbjct: 23563 KEEGVVEEEEEQEEEEEEEKEKEEEEEEEEE 23471 >M93254 Chironomus tentans high mobility group protein 1b (HMG1b) mRNA, Length = 828 Plus Strand HSPs: Score = 160 (56.3 bits), Expect = 1.9e-10, P = 1.9e-10 Identities = 42/117 (35%), Positives = 59/117 (50%), Frame = +1 Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 K K K D PKRP SA+ L+ + R IK E+P + +VAKK GE+W DK Sbjct: 31 KKANKNKMADK--PKRPLSAYMLWLNSARESIKRENPDFKVTEVAKKGGELWRGLK--DK 198 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGK--PDAAKK--GVVKAEKSKKKKEEEEDEEDEEDE 196 +E KAA K+ Y + + Y G D KK G + + KK ++ +D+ D Sbjct: 199 SEWEAKAATAKQNYIRALQEYERNGGGGDDKGKKRKGAAPKKGAGKKSKKGAHSDDDGDS 378 Query: 197 E 197 E Sbjct: 379 E 381 Score = 110 (38.7 bits), Expect = 0.0052, P = 0.0052 Identities = 29/90 (32%), Positives = 50/90 (55%), Frame = +1 Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 KP+ +S+Y ++ + RE K+++PD V +E +KK E W+ + K+K ++E A Sbjct: 61 KPKRPLSAYMLWLNSARESIKRENPDFKV--TEVAKKGGELWRGL--KDKSEWEAKAATA 228 Query: 67 KARYEREMKTYIPPKG--ETKKKFKDPNAPKR 96 K Y R ++ Y G + K K + APK+ Sbjct: 229 KQNYIRALQEYERNGGGGDDKGKKRKGAAPKK 324 >X80464 M.musculus HMG1-R-161 gene Length = 195 Plus Strand HSPs: Score = 160 (56.3 bits), Expect = 4.6e-10, P = 4.6e-10 Identities = 33/64 (51%), Positives = 39/64 (60%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 GK DPKK + +++ P NFSEFSKKCSERW+TM+AKEKGKFE Sbjct: 4 GKKDPKKAERQNVLICILFANLLGVAQEEAPGCFFNFSEFSKKCSERWETMTAKEKGKFE 183 Query: 61 DMAK 64 DM K Sbjct: 184 DMGK 195 >U01348 Rattus norvegicus clone B-0/7 arylamine N-acetyltransferase mRNA, Length = 1385 Minus Strand HSPs: Score = 159 (56.0 bits), Expect = 6.1e-10, P = 6.1e-10 Identities = 27/32 (84%), Positives = 31/32 (96%), Frame = -1 Query: 21 TCREEHKKKHPDASVNFSEFSKKCSERWKTMS 52 +C+EEHKKKHPD+SVNF+EF KKCSERWKTMS Sbjct: 134 SCQEEHKKKHPDSSVNFAEFLKKCSERWKTMS 39 Score = 99 (34.8 bits), Expect = 0.15, P = 0.14 Identities = 19/29 (65%), Positives = 21/29 (72%), Frame = -3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKK 29 GKGDP KPRGKMSSYAFFV +E + Sbjct: 186 GKGDPNKPRGKMSSYAFFVPGGAQEEASR 100 >U01343 Rattus norvegicus clone A-1 arylamine N-acetyltransferase mRNA, Length = 1418 Minus Strand HSPs: Score = 159 (56.0 bits), Expect = 6.2e-10, P = 6.2e-10 Identities = 27/32 (84%), Positives = 31/32 (96%), Frame = -1 Query: 21 TCREEHKKKHPDASVNFSEFSKKCSERWKTMS 52 +C+EEHKKKHPD+SVNF+EF KKCSERWKTMS Sbjct: 137 SCQEEHKKKHPDSSVNFAEFLKKCSERWKTMS 42 Score = 99 (34.8 bits), Expect = 0.15, P = 0.14 Identities = 19/29 (65%), Positives = 21/29 (72%), Frame = -3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKK 29 GKGDP KPRGKMSSYAFFV +E + Sbjct: 189 GKGDPNKPRGKMSSYAFFVPGGAQEEASR 103 >U01345 Rattus norvegicus clone A-3 arylamine N-acetyltransferase mRNA, Length = 478 Minus Strand HSPs: Score = 155 (54.6 bits), Expect = 6.4e-10, P = 6.4e-10 Identities = 26/31 (83%), Positives = 30/31 (96%), Frame = -2 Query: 21 TCREEHKKKHPDASVNFSEFSKKCSERWKTM 51 +C+EEHKKKHPD+SVNF+EF KKCSERWKTM Sbjct: 192 SCQEEHKKKHPDSSVNFAEFLKKCSERWKTM 100 Score = 99 (34.8 bits), Expect = 0.031, P = 0.031 Identities = 19/29 (65%), Positives = 21/29 (72%), Frame = -1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKK 29 GKGDP KPRGKMSSYAFFV +E + Sbjct: 244 GKGDPNKPRGKMSSYAFFVPGGAQEEASR 158 >U10401 Caenorhabditis elegans cosmid T20B12 Length = 36,811 Minus Strand HSPs: Score = 128 (45.1 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10 Identities = 36/90 (40%), Positives = 51/90 (56%), Frame = -1 Query: 52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111 S + KG E K +K + +RE K +G+ KK KDPNAPKR SA+ + R + Sbjct: 14866 SKRRKG--EPKEKREK-KEKREKK-----EGKKGKKDKDPNAPKRATSAYMQWFLASRNE 14711 Query: 112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 +K + G S+ DVAKK G W ++DDK+ Sbjct: 14710 LKED--GDSVADVAKKGGAKWKTMSSDDKK 14627 Score = 98 (34.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10 Identities = 26/82 (31%), Positives = 43/82 (52%), Frame = -2 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK-GVVKAEK-----SKKK---KEEEEDEE 191 Q +E+KA + K +YEK++ YR G P ++ K K K S K KE D + Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398 Query: 192 DEEDEEEEEDEEDEDEEEDDDD 213 D +DEE ++ E+ +E+ ++ Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEE 14332 Score = 94 (33.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09 Identities = 27/85 (31%), Positives = 45/85 (52%), Frame = -2 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK-GVVKAEK-----SKKK---KEEEEDEE 191 Q +E+KA + K +YEK++ YR G P ++ K K K S K KE D + Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398 Query: 192 DEEDEEEEEDEED---EDEEEDDDD 213 D +DEE ++ E+ ++E E+ ++ Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEESNN 14323 Score = 94 (33.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09 Identities = 28/88 (31%), Positives = 45/88 (51%), Frame = -2 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK-GVVKAEK-----SKKK---KEEEEDEE 191 Q +E+KA + K +YEK++ YR G P ++ K K K S K KE D + Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398 Query: 192 DEEDEEEEEDEE-----DEDEEEDDDDE 214 D +DEE ++ E+ +E EE ++ + Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEESNNGSD 14314 Score = 80 (28.2 bits), Expect = 0.72, Sum P(3) = 0.51 Identities = 19/54 (35%), Positives = 27/54 (50%), Frame = -2 Query: 58 KFEDMAKADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEY 108 K+E+ A+ DK+RYE+EMK Y PP +K + PS+ EY Sbjct: 14574 KWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEY 14413 Score = 67 (23.6 bits), Expect = 0.0064, Sum P(2) = 0.0064 Identities = 17/53 (32%), Positives = 28/53 (52%), Frame = -1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 56 DP P+ S+Y + R E K+ D + ++ +KK +WKTMS+ +K Sbjct: 14776 DPNAPKRATSAYMQWFLASRNELKE---DGD-SVADVAKKGGAKWKTMSSDDK 14630 Score = 65 (22.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06 Identities = 23/97 (23%), Positives = 40/97 (41%), Frame = -2 Query: 130 EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK-SKKKKEEEE 188 + W A +DK YEK+ + ++ ++ + K G ++ SK+ + + Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398 Query: 189 DEEDEED----------EEEEE-----DEEDEDEEED 210 D +DEE EE EE D DE ++ D Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEESNNGSDGSDESDDSD 14287 Score = 46 (16.2 bits), Expect = 0.00020, Sum P(2) = 0.00020 Identities = 10/21 (47%), Positives = 15/21 (71%), Frame = -3 Query: 194 EDEEEEEDEEDEDEE--EDDD 212 +D ++EDEED + + EDDD Sbjct: 9674 DDLVQDEDEEDVEVDVVEDDD 9612 Score = 45 (15.8 bits), Expect = 0.00026, Sum P(2) = 0.00026 Identities = 8/18 (44%), Positives = 14/18 (77%), Frame = -3 Query: 186 EEEDEEDEEDEEEEEDEE 203 ++EDEED E + E+D++ Sbjct: 9662 QDEDEEDVEVDVVEDDDK 9609 Score = 44 (15.5 bits), Expect = 0.00032, Sum P(2) = 0.00032 Identities = 9/20 (45%), Positives = 13/20 (65%), Frame = -3 Query: 190 EEDEEDEEEEEDEEDEDEEE 209 +EDEED E + E+D+ E Sbjct: 9659 DEDEEDVEVDVVEDDDKSME 9600 Score = 44 (15.5 bits), Expect = 0.00032, Sum P(2) = 0.00032 Identities = 9/21 (42%), Positives = 14/21 (66%), Frame = -3 Query: 194 EDEEEEEDEEDEDEEEDDDDE 214 +DE+EE+ E D E++D E Sbjct: 9662 QDEDEEDVEVDVVEDDDKSME 9600 Score = 44 (15.5 bits), Expect = 1.3, Sum P(2) = 0.72 Identities = 13/38 (34%), Positives = 20/38 (52%), Frame = -2 Query: 38 SEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 S+ ++ ER ++ K +GK K KAR ER+ K Sbjct: 14880 SKMFRRSEER---VNLKRRGKRRRKEKRRKARKERKTK 14776 Score = 41 (14.4 bits), Expect = 0.00065, Sum P(2) = 0.00065 Identities = 8/22 (36%), Positives = 15/22 (68%), Frame = -3 Query: 188 EDEEDEEDEEEEEDEEDEDEEE 209 +D +EDEE+ E + ED+++ Sbjct: 9674 DDLVQDEDEEDVEVDVVEDDDK 9609 >Z48008;Z71256 S.cerevisiae chromosome IV cosmid 8119. Length = 37,404 Minus Strand HSPs: Score = 159 (56.0 bits), Expect = 1.1e-09, P = 1.1e-09 Identities = 44/134 (32%), Positives = 72/134 (53%), Frame = -2 Query: 68 ARYEREMKTYIPPKGETKK---KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDV 124 A +++E+ T K +TK+ K +DPN PKRP +A+ L+C + +I+ ++ L DV Sbjct: 6980 ASFKQELLTKPFRKSKTKRHKVKERDPNMPKRPTNAYLLYCEMNKERIR-QNGSL---DV 6813 Query: 125 AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKAEKSKKK 183 + L E W N D++PY K ++ +E+Y+ ++ Y K DA K E +K Sbjct: 6812 TRDLAEGWKNLNEQDRKPYYKLYSEDRERYQMEMEIYNKKISNIDADDD---KEENEQKI 6642 Query: 184 KEEEEDEEDE-EDEEEEED 201 K EE + D + ED Sbjct: 6641 KNNEEGSSTKVADSKGGED 6585 >X53858 Rat TTF-1 mRNA for thyroid nuclear factor 1 Length = 2326 Minus Strand HSPs: Score = 150 (52.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09 Identities = 30/71 (42%), Positives = 48/71 (67%), Frame = -1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E+K ++KEK K + KG +K K E+ ++++EE E EE EE+EEEEE+EE Sbjct: 1615 ERKGRRMKEKKGKRRKRRKRKGGVGTRRKRRKKEEEEEEEEEEAEKEEGEEEEEEEEEEE 1436 Query: 204 DEDEEEDDDDE 214 +E+EEE++++E Sbjct: 1435 EEEEEEEEEEE 1403 Score = 142 (50.0 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08 Identities = 31/71 (43%), Positives = 49/71 (69%), Frame = -1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E+K ++KEK K R K + +KG V + ++KKEEEE+EE+EE E+EE +EE Sbjct: 1615 ERKGRRMKEKKGK-----RRKRRK---RKGGVGTRRKRRKKEEEEEEEEEEAEKEEGEEE 1460 Query: 204 DEDEEEDDDDE 214 +E+EEE++++E Sbjct: 1459 EEEEEEEEEEE 1427 Score = 128 (45.1 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06 Identities = 25/77 (32%), Positives = 51/77 (66%), Frame = -1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ A+ +E E++ + + + ++ A + EEEE+EE+EE+EE Sbjct: 1516 EEEEEEEEEEAEKEEGEEEEEEEEEEEEEEEEEEEEEEAAAAAAAAAEEEEEEEEEEEEE 1337 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 1336 EEEEEEEEEEEEEEEEE 1286 Score = 123 (43.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05 Identities = 24/70 (34%), Positives = 47/70 (67%), Frame = -1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +++ E+ + +E+ E++ + + +AA AE+ ++++EEEE+EE+EE+EE Sbjct: 1495 EEEAEKEEGEEEEEEEEEEEEEEEEEEEEEEAAAAAAAAAEEEEEEEEEEEEEEEEEEEE 1316 Query: 198 EEEDEEDEDE 207 EEE+EE+E+E Sbjct: 1315 EEEEEEEEEE 1286 Score = 110 (38.7 bits), Expect = 0.0018, Sum P(2) = 0.0018 Identities = 23/67 (34%), Positives = 45/67 (67%), Frame = -1 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +K+ E++ + +E+ E++ + + AA + E+ ++++EEEE+EE+EE+EEE Sbjct: 1483 EKEEGEEEEEEEEEEEEEE-EEEEEEEEAAAAAAAAAEEEEEEEEEEEEEEEEEEEEEEE 1307 Query: 199 EEDEEDE 205 EE+EE+E Sbjct: 1306 EEEEEEE 1286 Score = 91 (32.0 bits), Expect = 0.31, Sum P(2) = 0.27 Identities = 21/60 (35%), Positives = 36/60 (60%), Frame = -2 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ +KK K K+K ++ + K K KK K +K KKKK++++ ++ +E+EEEE Sbjct: 1446 KKKKKKKKKKKKKKKQQQQQQQQQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEE 1267 Score = 90 (31.7 bits), Expect = 0.41, Sum P(2) = 0.34 Identities = 19/72 (26%), Positives = 45/72 (62%), Frame = -2 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ EKK K K+K +K + K K ++ K +K KKKK++++ ++ ++ ++++ Sbjct: 1482 KKKKEKKKKKKKKKKKKKKKKKKKKKKQQQQQQQQQKKKKKKKKKKKKKKKKKKKKKKKK 1303 Query: 200 EDEEDEDEEEDD 211 + ++ ++EEE++ Sbjct: 1302 KKKKKKEEEEEE 1267 Score = 87 (30.6 bits), Expect = 0.91, Sum P(2) = 0.60 Identities = 19/60 (31%), Positives = 36/60 (60%), Frame = -2 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ +KK K K++ ++ + K K KK K +K KKKK++++ +E+EE+E ++ Sbjct: 1437 KKKKKKKKKKKKQQQQQQQQQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEVQQ 1258 Score = 46 (16.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09 Identities = 9/25 (36%), Positives = 15/25 (60%), Frame = -3 Query: 80 PKGETKKKFKDP-NAPKRPPSAFFL 103 P+ K ++P P+RPP+ FF+ Sbjct: 1790 PQNCAMPKLENPFELPERPPNLFFV 1716 >J03998 P.falciparum glutamic acid-rich protein gnen, complete cds. Length = 2384 Plus Strand HSPs: Score = 156 (54.9 bits), Expect = 3.5e-09, P = 3.5e-09 Identities = 37/104 (35%), Positives = 66/104 (63%), Frame = +3 Query: 111 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE-KYEKDIAAYRAKGKPDA 169 K K E LSI + + +G + + ++KK AK++E + +K + + K + Sbjct: 1803 KSKVEEKNLSIQE--QLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEE 1976 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K+ V+ E + +++EEE EEDEE+EEEEE+EE+E+EEE++++E Sbjct: 1977 SKE--VQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEE 2105 Score = 154 (54.2 bits), Expect = 1.4e-08, P = 1.4e-08 Identities = 28/76 (36%), Positives = 54/76 (71%), Frame = +3 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 DK+ +K+ +K ++ K++ + + D ++ + E+ ++++EEEE+EE+EE+EEE Sbjct: 1950 DKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2129 Query: 199 EEDEEDEDEEEDDDDE 214 +EDEEDED+ E+D+D+ Sbjct: 2130 DEDEEDEDDAEEDEDD 2177 Score = 144 (50.7 bits), Expect = 6.0e-07, P = 6.0e-07 Identities = 33/89 (37%), Positives = 59/89 (66%), Frame = +3 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KK+ ++ A KQ + K KE+ K++ + + D ++ V + E+ ++++E Sbjct: 1899 KKMAKI--EEAELQKQKHVDKEEDKKEE-SKEVQEESKEVQED--EEEVEEDEEEEEEEE 2063 Query: 186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEE+EE+EE+EEEEE+EE+E+E+ED++DE Sbjct: 2064 EEEEEEEEEEEEEEEEEEEEEEDEDEEDE 2150 Score = 135 (47.5 bits), Expect = 9.6e-06, P = 9.6e-06 Identities = 24/77 (31%), Positives = 52/77 (67%), Frame = +3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + D ++ AE+ + EE+ED+ +E+D+E Sbjct: 2040 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDE 2219 Query: 198 EEEDEEDEDEEEDDDDE 214 E++DEED+DE+ED+D+E Sbjct: 2220 EDDDEEDDDEDEDEDEE 2270 Score = 129 (45.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06 Identities = 26/79 (32%), Positives = 53/79 (67%), Frame = +3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED--EED 195 ++++ E++ + +E+ E++ + D A++ AE+ + EE++DEED EED Sbjct: 2061 EEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEED 2240 Query: 196 EEEEEDEEDEDEEEDDDDE 214 ++E+EDE++EDEEE++++E Sbjct: 2241 DDEDEDEDEEDEEEEEEEE 2297 Score = 125 (44.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06 Identities = 26/81 (32%), Positives = 53/81 (65%), Frame = +3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--- 194 ++++ E++ + +E+ E++ + D A++ AE+ + EE++DEED++ Sbjct: 2061 EEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEED 2240 Query: 195 -DEEEEEDEEDEDEEEDDDDE 214 DE+E+EDEEDE+EEE++++E Sbjct: 2241 DDEDEDEDEEDEEEEEEEEEE 2303 Score = 121 (42.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05 Identities = 25/77 (32%), Positives = 52/77 (67%), Frame = +3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E + A+ D A++ AE+ +EE+D+E+++DE+ Sbjct: 2082 EEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDD---DEEDDDEEDDDED 2252 Query: 198 EEEDEEDEDEEEDDDDE 214 E+EDEEDE+EEE++++E Sbjct: 2253 EDEDEEDEEEEEEEEEE 2303 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075 Identities = 27/75 (36%), Positives = 41/75 (54%), Frame = +3 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ E+K K +EK K K K KK K EK +KKKEE+E ++ + D+E E Sbjct: 1158 KKKQEEKEKKKQEKERKKQEKKERKQKEKEMKKQK-KIEKERKKKEEKEKKKKKHDKENE 1334 Query: 200 E--DEEDEDEEEDDDD 213 E + D+ EE +++ Sbjct: 1335 ETMQQPDQTSEETNNE 1382 Score = 97 (34.1 bits), Expect = 0.013, Sum P(2) = 0.013 Identities = 16/32 (50%), Positives = 27/32 (84%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E ++ ++E+++EDEEDEEEEE+EE+E E++ Sbjct: 2220 EDDDEEDDDEDEDEDEEDEEEEEEEEEESEKK 2315 Score = 90 (31.7 bits), Expect = 1.8, P = 0.84 Identities = 48/186 (25%), Positives = 88/186 (47%), Frame = +3 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 E+ KKK + E K+ ER K + K K ++M K K ER+ K K + Sbjct: 1149 EKKKKKQEE-----KEKKKQEKERKKQEKKERKQKEKEMKKQKKIEKERKKKE---EKEK 1304 Query: 84 TKKKFKDPNAP--KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN--NTAADD 139 KKK N ++P +E + ++ + K+ GE + + Sbjct: 1305 KKKKHDKENEETMQQPDQTSEETNNEIMVPLPSPLTDVTTPEEHKE-GEHKEEEHKEGEH 1481 Query: 140 KQPYEKKAAKLKEKYEKD---IAAYRAKGKPDAAKKGVVKAEKSKKKKEEE---EDEEDE 193 K+ K+ +E+++K+ +++KGK D KK K +K+KK+K ++ ++ ++ Sbjct: 1482 KEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGKKDKGKHKKAKKEKVKKHVVKNVIED 1661 Query: 194 EDEEEEEDEEDEDEE 208 ED++ E ED+E Sbjct: 1662 EDKDGVEIINLEDKE 1706 Score = 89 (31.3 bits), Expect = 2.4, P = 0.91 Identities = 46/191 (24%), Positives = 91/191 (47%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82 +++ +KKH E +K ++ K ++K K E K DK + E + G Sbjct: 675 KDKKEKKHKKDK---KEKKEKKDKKEKKDKKEKKHKKEKKHKKDKKKKENSEVMSLYKTG 845 Query: 83 ETKKK----FKDPNAPKRPPSAF-------FLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131 + K K + N + S L S Y+ + +G G I + E Sbjct: 846 QHKPKNATEHGEENLDEEMVSEINNNAQGGLLLSSPYQYREQG---GCGI---ISSVHET 1007 Query: 132 WNNTAADDKQPY--EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 N+T +DK+ +KK +E+ K + K K +K + + EK +KKK+++E+ Sbjct: 1008 SNDTKDNDKENISEDKKEDHQQEEMLKTLDKKERKQK----EKEMKEQEKIEKKKKKQEE 1175 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDD 213 +E ++ E+E + +E ++ ++ + + Sbjct: 1176 KEKKKQEKERKKQEKKERKQKEKE 1247 Score = 84 (29.6 bits), Expect = 8.7, P = 1.0 Identities = 20/71 (28%), Positives = 42/71 (59%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K KEK K+ K K K+ K EK +KK+E++E ++ E++ ++++ E Sbjct: 1095 DKKERKQKEKEMKEQEKIEKKKKKQEEKEKK-KQEKERKKQEKKERKQKEKEMKKQKKIE 1271 Query: 204 DEDEEEDDDDE 214 E +++++ ++ Sbjct: 1272 KERKKKEEKEK 1304 Score = 53 (18.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06 Identities = 15/50 (30%), Positives = 23/50 (46%), Frame = +3 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 73 E K+KH D + E SK+ E K + E+ ED + ++ E E Sbjct: 1926 ELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEE 2075 Score = 49 (17.2 bits), Expect = 0.033, Sum P(2) = 0.032 Identities = 21/67 (31%), Positives = 31/67 (46%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAK-EKGKFEDMAKADKARYEREMKTYIPPK 81 R++ KKK N + KK +R+K M K +K K + K K + ++ K K Sbjct: 1954 RKKTKKK------NLKRY-KKNLKRYKKMKKK*KKMKKKKKKKRKKKKRKKRKKKKRKKK 2112 Query: 82 GETKKKFK 89 KKK K Sbjct: 2113 KRKKKKMK 2136 >M81360 Babesia bovis non-histone protein mRNA, complete cds. Length = 401 Plus Strand HSPs: Score = 147 (51.7 bits), Expect = 5.4e-09, P = 5.4e-09 Identities = 28/79 (35%), Positives = 49/79 (62%), Frame = +3 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS--IGDVAKKLGEMWNNTAADDKQP 142 +K KDPNAPKR S++ F E R +I E+P ++ + + K +G WN + ++K+P Sbjct: 108 RKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKP 287 Query: 143 YEKKAAKLKEKYEKDIAAY 161 YE+ + + + +YE++ A Y Sbjct: 288 YERMSDEDRVRYEREKAEY 344 Score = 130 (45.8 bits), Expect = 3.8e-07, P = 3.8e-07 Identities = 27/80 (33%), Positives = 41/80 (51%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +SSY FF + R E ++P+ + + + K W +S +EK +E Sbjct: 117 KKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKPYER 296 Query: 62 MAKADKARYEREMKTYIPPK 81 M+ D+ RYERE Y K Sbjct: 297 MSDEDRVRYEREKAEYAQRK 356 >D86076 Xenopus laevis oocyte mRNA for DNA-binding protein, complete cds. Length = 1575 Plus Strand HSPs: Score = 155 (54.6 bits), Expect = 5.5e-09, P = 5.5e-09 Identities = 54/193 (27%), Positives = 95/193 (49%), Frame = +2 Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 AF V + E K ++ +E SK+ +RWK ++ EK F + +A++ R + M Sbjct: 248 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPF--IEEAERLRL-KHMA 418 Query: 76 TYIPPKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134 Y K +KK K DP+A +PP+ E PK + S G KL + Sbjct: 419 DYPDYKYRPRKKPKVDPSASSKPPA--LTQSPEKSPKSR------SAGRKCPKLKPSHSG 574 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 + + + + + ++Y + +A GK AA V ++ ++++EEEED+E+EE Sbjct: 575 SGSKSLS-IKSEYSGGSDEYV--FGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEE 745 Query: 195 DEEEEEDEEDEDEE 208 DE + +++ED+E Sbjct: 746 DELQIRIKQEEDDE 787 Score = 118 (41.5 bits), Expect = 0.00095, P = 0.00095 Identities = 27/69 (39%), Positives = 39/69 (56%), Frame = +2 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 K+ +K +Y Y G P A+ K A K E+EE+EE+EED+EEEEDE Sbjct: 584 KSLSIKSEYSGGSDEY-VFGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEEDELQI 760 Query: 206 DEEEDDDDE 214 ++++DDE Sbjct: 761 RIKQEEDDE 787 Score = 103 (36.3 bits), Expect = 0.053, P = 0.052 Identities = 23/75 (30%), Positives = 41/75 (54%), Frame = +2 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 KRP +AF ++ R KI + P + +++K+LG+ W +K P+ ++A +L+ K+ Sbjct: 233 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIEEAERLRLKH 412 Query: 155 EKDIA--AYRAKGKP 167 D YR + KP Sbjct: 413 MADYPDYKYRPRKKP 457 >D83650 Xenopus laevis mRNA for XLS13A protein, complete cds. Length = 1581 Plus Strand HSPs: Score = 155 (54.6 bits), Expect = 5.5e-09, P = 5.5e-09 Identities = 54/193 (27%), Positives = 95/193 (49%), Frame = +2 Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 AF V + E K ++ +E SK+ +RWK ++ EK F + +A++ R + M Sbjct: 272 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPF--IREAERLRL-KHMA 442 Query: 76 TYIPPKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134 Y K +KK K DP+A +PP+ E PK + S G KL + Sbjct: 443 DYPDYKYRPRKKPKVDPSASSKPPA--LTQSPEKSPKSR------SAGRKCPKLKPSHSG 598 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 + + + + + ++Y + +A GK AA V ++ ++++EEEED+E+EE Sbjct: 599 SGSKSLS-IKSEYSGGSDEYV--FGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEE 769 Query: 195 DEEEEEDEEDEDEE 208 DE + +++ED+E Sbjct: 770 DELQIRIKQEEDDE 811 Score = 118 (41.5 bits), Expect = 0.00095, P = 0.00095 Identities = 27/69 (39%), Positives = 39/69 (56%), Frame = +2 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 K+ +K +Y Y G P A+ K A K E+EE+EE+EED+EEEEDE Sbjct: 608 KSLSIKSEYSGGSDEY-VFGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEEDELQI 784 Query: 206 DEEEDDDDE 214 ++++DDE Sbjct: 785 RIKQEEDDE 811 Score = 104 (36.6 bits), Expect = 0.041, P = 0.040 Identities = 23/75 (30%), Positives = 41/75 (54%), Frame = +2 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 KRP +AF ++ R KI + P + +++K+LG+ W +K P+ ++A +L+ K+ Sbjct: 257 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 436 Query: 155 EKDIA--AYRAKGKP 167 D YR + KP Sbjct: 437 MADYPDYKYRPRKKP 481 >Y14075 Arabidopsis thaliana mRNA for HMG delta protein Length = 539 Plus Strand HSPs: Score = 144 (50.7 bits), Expect = 8.3e-09, P = 8.3e-09 Identities = 26/77 (33%), Positives = 43/77 (55%), Frame = +1 Query: 86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYE 144 KK KDPN PK+PPS FF+F ++R + +P S+G+V + G+ W +++ P+ Sbjct: 76 KKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFV 255 Query: 145 KKAAKLKEKYEKDIAAY 161 K+ K +Y + Y Sbjct: 256 AKSQSKKTEYAVTMQQY 306 Score = 95 (33.4 bits), Expect = 0.16, P = 0.15 Identities = 19/74 (25%), Positives = 37/74 (50%), Frame = +1 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP +P+ S + F+ R+E +PD + + + ++WKTM+ +E+ F + Sbjct: 88 DPNRPKKPPSPFFVFLDDFRKEFNLANPD-NKSVGNVGRAAGKKWKTMTEEERAPFVAKS 264 Query: 64 KADKARYEREMKTY 77 ++ K Y M+ Y Sbjct: 265 QSKKTEYAVTMQQY 306 >Z29356 Gallus domesticus of h71t7 gene encoding G.domesticus expressed sequence Length = 237 Plus Strand HSPs: Score = 147 (51.7 bits), Expect = 9.2e-09, P = 9.2e-09 Identities = 26/27 (96%), Positives = 27/27 (100%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHK 27 GKGDPKKPRGKMSSYAFFVQTCR+EHK Sbjct: 156 GKGDPKKPRGKMSSYAFFVQTCRQEHK 236 >E08995 DNA encoding a protein involved in Leucocytozoon phylaxis. Length = 1686 Plus Strand HSPs: Score = 154 (54.2 bits), Expect = 1.2e-08, P = 1.2e-08 Identities = 28/77 (36%), Positives = 57/77 (74%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E++ + +E+ E++I + + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 118 NEKEEQEEEEQE-QEEQEQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEE 294 Query: 198 EEEDEEDEDEEEDDDDE 214 EE+DEE+E+EEE D+DE Sbjct: 295 EEQDEEEEEEEEQDEDE 345 Score = 152 (53.5 bits), Expect = 2.8e-08, P = 2.8e-08 Identities = 29/78 (37%), Positives = 55/78 (70%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE-DEEDE 196 +++Q E++ ++ E+ E+D + + + +K + E+ ++++EEEE+EE DEE+E Sbjct: 139 EEEQEQEEQEQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEEEEQDEEEE 318 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE +EDE+EEED+++E Sbjct: 319 EEEEQDEDEEEEEDEEEE 372 Score = 131 (46.1 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 27/78 (34%), Positives = 53/78 (67%), Frame = +1 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE--EDE 196 +++ E++ +E+ E+D K + + ++ + E+ +++++EEE+EE+E EDE Sbjct: 166 EQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEEEEQDEEEEEEEEQDEDE 345 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEEDEE+E+EEE +++E Sbjct: 346 EEEEDEEEEEEEEQNEEE 399 Score = 130 (45.8 bits), Expect = 3.4e-05, P = 3.4e-05 Identities = 23/63 (36%), Positives = 48/63 (76%), Frame = +1 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 E+ EK+ + + + ++ +V+ ++ ++++EEEDEE+EE++EEEE+EE+E+EEE++ Sbjct: 112 EENEKE-EQEEEEQEQEEQEQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEE 288 Query: 212 DDE 214 ++E Sbjct: 289 EEE 297 Score = 127 (44.7 bits), Expect = 8.0e-05, P = 8.0e-05 Identities = 24/77 (31%), Positives = 53/77 (68%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D+++ E+ + +EK E++ + + + ++ + E+ ++++E++EDEE+EEDEE Sbjct: 196 DEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEEEE---QDEEEEEEEEQDEDEEEEEDEE 366 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE +EE+++D++ Sbjct: 367 EEEEEEQNEEEQNEDEQ 417 Score = 120 (42.2 bits), Expect = 0.00056, P = 0.00056 Identities = 21/77 (27%), Positives = 49/77 (63%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D+++ E++ + +E+ E + + + + ++ +++EEEE+EE +E +E Sbjct: 304 DEEEEEEEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDE 483 Query: 198 EEEDEEDEDEEEDDDDE 214 EE+DEE++DEEE+++++ Sbjct: 484 EEQDEEEQDEEEEEEEQ 534 Score = 117 (41.2 bits), Expect = 0.0013, P = 0.0013 Identities = 20/77 (25%), Positives = 49/77 (63%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E + + E+ E++ + D + E+ ++++EE++++++EE +E Sbjct: 319 EEEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDE 498 Query: 198 EEEDEEDEDEEEDDDDE 214 EE+DEE+E+EE+++ DE Sbjct: 499 EEQDEEEEEEEQEEQDE 549 Score = 116 (40.8 bits), Expect = 0.0017, P = 0.0017 Identities = 19/77 (24%), Positives = 53/77 (68%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +++Q +++ + +E+ E++ + + + + + E+ ++++E++E +E+E+DEE Sbjct: 322 EEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDEE 501 Query: 198 EEEDEEDEDEEEDDDDE 214 E+++EE+E+E+E+ D+E Sbjct: 502 EQDEEEEEEEQEEQDEE 552 Score = 116 (40.8 bits), Expect = 0.0017, P = 0.0017 Identities = 23/81 (28%), Positives = 54/81 (66%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEE----EEDEEDE 193 ++++ E++ + +E+ E+D + + + ++ + E+++ ++ E EE+EE+E Sbjct: 277 EEEEEEEEQDEEEEEEEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEE 456 Query: 194 EDEEEEEDEEDEDEEEDDDDE 214 E+E++E+DEE++DEEE D++E Sbjct: 457 EEEQQEQDEEEQDEEEQDEEE 519 Score = 111 (39.1 bits), Expect = 0.0065, P = 0.0064 Identities = 23/80 (28%), Positives = 50/80 (62%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +D++ E++ +E+ E + + + ++ + + +++ EEE+DEE+EE+E+ Sbjct: 355 EDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDEEEQDEEEEEEEQ 534 Query: 198 EEEDEEDED---EEEDDDDE 214 EE+DEE E+ E+E++D+E Sbjct: 535 EEQDEEQEEVYAEKENEDEE 594 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011 Identities = 19/75 (25%), Positives = 49/75 (65%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +D++ E + + +E+ ++ + + + ++ + E+ +++++EEE +E+E+DEE Sbjct: 337 EDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDEEEQDEE 516 Query: 198 EEEDEEDEDEEEDDD 212 EEE+E++E +EE ++ Sbjct: 517 EEEEEQEEQDEEQEE 561 Score = 99 (34.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05 Identities = 19/42 (45%), Positives = 32/42 (76%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEE-----EEEDEEDEDEEEDDDDE 214 E+ ++++EEE++E+DEE EE E EDEE +++EE+ +DE Sbjct: 502 EQDEEEEEEEQEEQDEEQEEVYAEKENEDEEKKEKEEEQEDE 627 Score = 96 (33.8 bits), Expect = 0.00015, Sum P(2) = 0.00015 Identities = 17/40 (42%), Positives = 33/40 (82%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEE---DEEDEDEEEDDDDE 214 ++ ++ +EEEE+E++E+DEE+EE ++E+EDEE+ + +E Sbjct: 493 DEEEQDEEEEEEEQEEQDEEQEEVYAEKENEDEEKKEKEE 612 Score = 90 (31.7 bits), Expect = 1.7, P = 0.82 Identities = 23/80 (28%), Positives = 51/80 (63%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE--EEEDEEDEED 195 +D+Q E++ + +E+ E+D + + + D ++ + E+ ++++E E++ EDEE Sbjct: 421 EDEQNEEEEEEEEEEQQEQD-EEEQDEEEQDEEEEEEEQEEQDEEQEEVYAEKENEDEEK 597 Query: 196 EEEEEDEEDED---EEEDDDD 213 +E+EE++EDE E+E D++ Sbjct: 598 KEKEEEQEDEKIYVEKEKDEE 660 Score = 72 (25.3 bits), Expect = 4.6, Sum P(2) = 0.99 Identities = 24/73 (32%), Positives = 39/73 (53%), Frame = +1 Query: 139 DKQPY-EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D++ Y EK+ KE EK++ + K ++ K K K KK + EEE E + + E Sbjct: 652 DEEVYVEKEQEHFKE-LEKEVL----EEKVESEHKDDKKETKIKKHEVEEEREIEIKGES 816 Query: 198 EEEDEEDEDEEEDD 211 EE DE+ + +E + Sbjct: 817 EEIDEKKSEVKEQN 858 Score = 71 (25.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05 Identities = 33/134 (24%), Positives = 56/134 (41%), Frame = +2 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113 K+K K + M K +K + + K + KK K+ N K+ + + + K K Sbjct: 95 KKKKKMKKMKKKNKKKKNKNKKN------KNKKS*KNKNKMKKNKKRK-MKKKKKKKKKK 253 Query: 114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173 + KK +M +K +KK K+K+K +K + K K + K Sbjct: 254 KKKKKKKKKKKKKKKSKMKKKKKKKNKMKMKKKK-KMKKKKKKKNKMKKNKMKMNKMKMN 430 Query: 174 VVKAEKSKKKKEEE 187 +K +K KKKK + Sbjct: 431 KMKKKKKKKKKNNK 472 Score = 54 (19.0 bits), Expect = 4.6, Sum P(2) = 0.99 Identities = 19/84 (22%), Positives = 35/84 (41%), Frame = +2 Query: 6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 65 K + KM + +++ KKK + N ++ K ++ K K+K + M Sbjct: 386 KMKKNKMKMNKMKMNKMKKKKKKKKKN---NKNKMKKNKMKKNKMKKKKKKNRKNKMKNK 556 Query: 66 DKARYEREMKTYIPPKGETKKKFK 89 K +++MK K + KK K Sbjct: 557 KKYMLKKKMKMKKKKKKKKNKKMK 628 >L22300 Chilo iridescent virus type 6 zinc finger protein and non-histone Length = 5702 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08 Identities = 50/175 (28%), Positives = 80/175 (45%), Frame = +3 Query: 8 PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADK 67 P+ SSY FF Q R + PD N + ++W + +++ K++ MA D+ Sbjct: 927 PKRNKSSYLFFCQEIRPSIVAEMPDIKPN--QVMVHLGKKWSELPLEDRKKYDVMAVEDR 1100 Query: 68 ARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK 127 RY + K E KK N P + S + FC++ R KIK + P L+ D+ K Sbjct: 1101 KRY-------LASK-EANKKL---NKPVKI-SGYLQFCADER-KIKLKFPDLTTKDITAK 1241 Query: 128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKAEKSKK 182 LG MWN+ ++ Q Y LK KY +I K + K+ ++ + +K Sbjct: 1242 LGGMWNDYKKNNPQ-Y------LKSKYGYEIVEQHYDYEKNEIDKENIIPSSHRRK 1388 Score = 124 (43.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06 Identities = 27/82 (32%), Positives = 41/82 (50%), Frame = +3 Query: 87 KFKD-PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 K KD N PKR S++ FC E RP I E P + V LG+ W+ +D++ Y+ Sbjct: 903 KPKDVTNVPKRNKSSYLFFCQEIRPSIVAEMPDIKPNQVMVHLGKKWSELPLEDRKKYDV 1082 Query: 146 KAAKLKEKYEKDIAAYRAKGKP 167 A + +++Y A + KP Sbjct: 1083 MAVEDRKRYLASKEANKKLNKP 1148 Score = 58 (20.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08 Identities = 14/40 (35%), Positives = 24/40 (60%), Frame = +1 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEE--EEEDEEDEDEE 208 K + K K +++ +EED + + +EEDE++EDEE Sbjct: 3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQEEDEDEEDEE 3831 Score = 54 (19.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08 Identities = 13/41 (31%), Positives = 24/41 (58%), Frame = +1 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 K + K K +++ +EED + + + EEDEDEE+++ Sbjct: 3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQ-EEDEDEEDEE 3831 Score = 47 (16.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07 Identities = 14/43 (32%), Positives = 24/43 (55%), Frame = +1 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 K + K K +++ +EED + + + EEDEDEE D++ Sbjct: 3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQ-EEDEDEE--DEE 3831 Score = 44 (15.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07 Identities = 15/44 (34%), Positives = 23/44 (52%), Frame = +1 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K + K K +++ +EED + + + EEDEDEE DE Sbjct: 3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQ-EEDEDEE----DE 3828 >X53025 P.falciparum DNA for erythrocyte membrane-associated antigen (clone Length = 253 Plus Strand HSPs: Score = 145 (51.0 bits), Expect = 1.4e-08, P = 1.4e-08 Identities = 30/65 (46%), Positives = 39/65 (60%), Frame = +2 Query: 85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS--IGDVAKKLGEMWNNTAADDKQP 142 +KK KDP+APKR SA+ F E R +I + P LS + V K +GE WN +K P Sbjct: 41 RKKKKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAP 220 Query: 143 YEKKA 147 +EKKA Sbjct: 221 FEKKA 235 Score = 111 (39.1 bits), Expect = 0.00011, P = 0.00011 Identities = 23/65 (35%), Positives = 32/65 (49%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ +S+Y FF + R E K P+ S + + K E W + KEK FE Sbjct: 50 KKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEK 229 Query: 62 MAKAD 66 A+ D Sbjct: 230 KAQED 244 >U05269 Brugia malayi high mobility group protein mRNA, partial cds. Length = 237 Plus Strand HSPs: Score = 145 (51.0 bits), Expect = 1.5e-08, P = 1.5e-08 Identities = 33/75 (44%), Positives = 44/75 (58%), Frame = +2 Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 K + KK KDPNAPKR SA+ + E R +I PG+S+ DV+K G W DK Sbjct: 5 KQKKTKKVKDPNAPKRAKSAYMFWLLENRSRIA--KPGMSVIDVSKAAGVEWGKVK--DK 172 Query: 141 QPYEKKAAKLKEKYE 155 YEK A++ K++YE Sbjct: 173 SKYEKMASQDKQRYE 217 Score = 121 (42.6 bits), Expect = 7.7e-06, P = 7.7e-06 Identities = 32/76 (42%), Positives = 40/76 (52%), Frame = +2 Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT----- 135 K + KK KDPNAPKR SA+ + E R +I PG+S+ DV+K G W Sbjct: 5 KQKKTKKVKDPNAPKRAKSAYMFWLLENRSRIA--KPGMSVIDVSKAAGVEWGKVKDKSK 178 Query: 136 ----AADDKQPYEKKAAK 149 A+ DKQ YE K K Sbjct: 179 YEKMASQDKQRYEAKKKK 232 Score = 93 (32.7 bits), Expect = 0.013, P = 0.013 Identities = 26/72 (36%), Positives = 35/72 (48%), Frame = +2 Query: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63 DP P+ S+Y F++ R K P SV + SK W + K+K K+E MA Sbjct: 32 DPNAPKRAKSAYMFWLLENRSRIAK--PGMSV--IDVSKAAGVEWGKV--KDKSKYEKMA 193 Query: 64 KADKARYEREMK 75 DK RYE + K Sbjct: 194 SQDKQRYEAKKK 229 >M55020;M37081 Rat nucleolin gene. Length = 4204 Plus Strand HSPs: Score = 154 (54.2 bits), Expect = 1.7e-08, P = 1.7e-08 Identities = 32/52 (61%), Positives = 40/52 (76%), Frame = +1 Query: 163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 AKGK AK VKA K EEEED+ED+EDEEE+EDEEDE+++ED+D+E Sbjct: 37 AKGKKTPAKVVPVKA---KSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEE 183 Score = 143 (50.3 bits), Expect = 9.8e-07, P = 9.8e-07 Identities = 28/50 (56%), Positives = 37/50 (74%), Frame = +1 Query: 167 PDAAKKGVVKAE--KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 P KK K K+K EEEED+ED+EDEEE+EDEEDE+++ED+D+E Sbjct: 34 PAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEE 183 Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 29/55 (52%), Positives = 42/55 (76%), Frame = +1 Query: 163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE---DEEEEEDEEDEDEEEDDDDE 214 AKGK AK VKA+ +++E++ED+EDEE DEE+EED+EDEDEEE++ ++ Sbjct: 37 AKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEEEEEGNQ 201 >U53810 Toxoplasma gondii GAA trinucleotide repeat region BS. Length = 800 Plus Strand HSPs: Score = 151 (53.2 bits), Expect = 1.7e-08, P = 1.7e-08 Identities = 38/121 (31%), Positives = 71/121 (58%), Frame = +2 Query: 101 FFLFCSEY----RPKIKGEHPGLS-IGDVAKKLGEMWNNT--AADDKQPYEKKAAKLKEK 153 FFL C Y RP + LS V+ + N A D++Q E++ + +E+ Sbjct: 50 FFLVCFTYFCETRPGMATATKALSGTSRVSPSEPRLLNFLLFAEDERQEEEEEEEEEEEE 229 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 E++ + + + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++ Sbjct: 230 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 409 Query: 214 E 214 E Sbjct: 410 E 412 Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 194 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 373 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 374 EEEEEEEEEEEEEEEEE 424 Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 197 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 376 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 377 EEEEEEEEEEEEEEEEE 427 Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 200 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 379 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 380 EEEEEEEEEEEEEEEEE 430 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 206 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 385 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++ E Sbjct: 386 EEEEEEEEEEEEEEEKE 436 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 209 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 388 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++ +E Sbjct: 389 EEEEEEEEEEEEEEKEE 439 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 212 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 391 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+ ++E Sbjct: 392 EEEEEEEEEEEEEKEEE 442 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 215 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 394 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE +++E Sbjct: 395 EEEEEEEEEEEEKEEEE 445 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 227 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 406 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E EEE++++E Sbjct: 407 EEEEEEEEKEEEEEEEE 457 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 233 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 412 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE E+EEE++++E Sbjct: 413 EEEEEEKEEEEEEEEEE 463 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 203 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 382 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++++ Sbjct: 383 EEEEEEEEEEEEEEEEK 433 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 218 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 397 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EE+++++E Sbjct: 398 EEEEEEEEEEEKEEEEE 448 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 221 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 400 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+E+E++++E Sbjct: 401 EEEEEEEEEEKEEEEEE 451 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 224 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 403 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E++EE++++E Sbjct: 404 EEEEEEEEEKEEEEEEE 454 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 230 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 409 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+++EEE++++E Sbjct: 410 EEEEEEEKEEEEEEEEE 460 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 236 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 415 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+E++E+EEE++++E Sbjct: 416 EEEEEKEEEEEEEEEEE 466 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 239 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 418 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE++E+E+EEE++++E Sbjct: 419 EEEEKEEEEEEEEEEEE 469 Score = 130 (45.8 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 23/77 (29%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 242 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 421 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE EE+E+EEE+++++ Sbjct: 422 EEEKEEEEEEEEEEEEK 472 Score = 130 (45.8 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 23/77 (29%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 245 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 424 Query: 198 EEEDEEDEDEEEDDDDE 214 EE++EE+E+EEE+++ E Sbjct: 425 EEKEEEEEEEEEEEEKE 475 >X73481 D.hydei Dhmst101 (2) gene Length = 4859 Plus Strand HSPs: Score = 154 (54.2 bits), Expect = 1.7e-08, P = 1.7e-08 Identities = 67/207 (32%), Positives = 99/207 (47%), Frame = +1 Query: 1 GKGDPK-KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGK 58 GKG K K GK S A + C E KK+ A+ KKC ER K A EK + Sbjct: 2977 GKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAAT------KKKCEERAKKQKEAAEKKQ 3138 Query: 59 FEDMAKADKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116 E+ AK K E++ + K +KK + A K +A C E K+K Sbjct: 3139 CEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAA 3318 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176 + AKK E AA+ KQ E++A KLKE EK RAK + +AA+K + Sbjct: 3319 EKKQCEERAKKEKE-----AAEKKQ-CEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCE 3480 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 E +K++KE E ++ E ++E++ ++ + Sbjct: 3481 -EAAKREKEAAEKKKCAEAAKKEKEATEKQK 3570 Score = 150 (52.8 bits), Expect = 9.0e-08, P = 9.0e-08 Identities = 65/184 (35%), Positives = 92/184 (50%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYER----EMKTYIP 79 KKK +A+ E + KKC E K + A EK K ++ AK +K ER E+ I Sbjct: 1327 KKKCEEAAKKEKEAAERKKCEELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIK 1506 Query: 80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 139 E KKK ++ A K A C E KIK I KKL + TA + Sbjct: 1507 KAAE-KKKCEE-TAKKGKEVAERKKCEELAKKIKKAE----IKKKCKKLAKKEKETA--E 1662 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS-KKKKEEEEDEEDEEDEEE 198 K+ EK A K KE EK AK + +AA+K K EKS KK+KE E ++ E+ +E Sbjct: 1663 KKKCEKAAKKRKEAAEKKKCEKAAKKRKEAAEKK--KCEKSAKKRKEAAEKKKCEKAAKE 1836 Query: 199 EEDEEDEDEEED 210 ++ ++ + E+ Sbjct: 1837 RKEAAEKKKCEE 1872 Score = 145 (51.0 bits), Expect = 5.2e-07, P = 5.2e-07 Identities = 57/169 (33%), Positives = 84/169 (49%), Frame = +1 Query: 42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPS 99 KKC E K +A EK K ++ AK +K E++ KT K E +KK + A KR + Sbjct: 2386 KKCRELAKKKAA-EKKKCKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEA 2562 Query: 100 AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159 A C + K K E AKK E TA +K+ EK A K K+ EK Sbjct: 2563 AEKKKCEKAAKKRKEEAEKKKCEKTAKKRKE----TA--EKKKCEKAAKKRKQAAEKKKC 2724 Query: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 AK + +AA+K AE +KK+KE E ++ EE ++E++ + + E+ Sbjct: 2725 EKAAKKRKEAAEKKKC-AEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEE 2874 Score = 143 (50.3 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 55/169 (32%), Positives = 87/169 (51%), Frame = +1 Query: 42 KKCSERWK-TMSAKEKGKFEDMAKADK-ARYEREMKTYIPPKGET-KKKFKDPNAPKRPP 98 KKC + K + A EK K + AK +K A +++ + + E +KK + A K Sbjct: 2989 KKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAKKLKE 3168 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 158 +A C E K+K + AKKL E AA+ KQ E++A KLKE EK Sbjct: 3169 AAEQKQCEERAKKLKEAAEKKQCEERAKKLKE-----AAEQKQ-CEERAKKLKEAAEKKQ 3330 Query: 159 AAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 RAK + +AA+K + E++KK KE E ++ EE ++E++ ++ E+ Sbjct: 3331 CEERAKKEKEAAEKKQCE-ERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEE 3483 Score = 139 (48.9 bits), Expect = 3.3e-06, P = 3.3e-06 Identities = 64/200 (32%), Positives = 92/200 (46%), Frame = +1 Query: 6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDM 62 K +GK ++ R KKK +A+ E + KKC ER K A EK + E+ Sbjct: 2971 KAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAEKKQCEER 3150 Query: 63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG 122 AK K + E K E KK K+ K+ C E K+K Sbjct: 3151 AK--KLKEAAEQKQC----EERAKKLKEAAEKKQ--------CEERAKKLKEAAEQKQCE 3288 Query: 123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 + AKKL E AA+ KQ E++A K KE EK RAK +AA+K + E++KK Sbjct: 3289 ERAKKLKE-----AAEKKQ-CEERAKKEKEAAEKKQCEERAKKLKEAAEKKQCE-ERAKK 3447 Query: 183 KKEEEEDEEDEEDEEEEEDEEDE 205 +KE E + EE + E++ ++ Sbjct: 3448 EKEAAEKKRCEEAAKREKEAAEK 3516 Score = 134 (47.2 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 64/182 (35%), Positives = 91/182 (50%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPPK-G 82 KKK +A+ E + KKC E K + A EK K + +AK +K E K + K G Sbjct: 2809 KKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKKLAKKEKKAGE---KNKLKKKAG 2979 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + KKK K K +A C+E K K + AKK E AA+ KQ Sbjct: 2980 KGKKKCKKLGK-KSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKE-----AAEKKQ- 3138 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EE 200 E++A KLKE E+ RAK +AA+K + E++KK KE E ++ EE ++ E Sbjct: 3139 CEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCE-ERAKKLKEAAEQKQCEERAKKLKEA 3315 Query: 201 DEEDEDEE 208 E+ + EE Sbjct: 3316 AEKKQCEE 3339 Score = 133 (46.8 bits), Expect = 1.9e-05, P = 1.9e-05 Identities = 62/171 (36%), Positives = 82/171 (47%), Frame = +1 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGKFEDMAKADKARYER----EMKTYI 78 E+ KK +A+ KKC + K A EK K E+ AK +K ER E+ I Sbjct: 1771 EKSAKKRKEAAEK-----KKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEELAKKI 1935 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138 E KKK K+ A K +A C E KIK +AKK E TA Sbjct: 1936 KKAAE-KKKCKEA-AKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKE----TA-- 2091 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 +K+ EK A K KE EK A AK + +AA+K + E +KK+KE E ++ EE Sbjct: 2092 EKKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCE-EAAKKEKEAAERKKCEE 2256 Score = 130 (45.8 bits), Expect = 4.5e-05, P = 4.5e-05 Identities = 56/167 (33%), Positives = 85/167 (50%), Frame = +1 Query: 42 KKCSER--WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE---TKKKFKDPNAPKR 96 KK E+ K + K K K + + K K E++ K + TKKK ++ A K+ Sbjct: 2938 KKAGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEE-RAKKQ 3114 Query: 97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156 +A C E K+K + AKKL E AA+ KQ E++A KLKE E+ Sbjct: 3115 KEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKE-----AAEKKQ-CEERAKKLKEAAEQ 3276 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEE 208 RAK +AA+K + E++KK+KE E ++ EE ++ E E+ + EE Sbjct: 3277 KQCEERAKKLKEAAEKKQCE-ERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEE 3435 Score = 129 (45.4 bits), Expect = 6.0e-05, P = 6.0e-05 Identities = 63/198 (31%), Positives = 87/198 (43%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYER----EMKTYIP 79 KKK +A+ E + KKC E K + A EK K ++ AK +K ER E+ I Sbjct: 1327 KKKCEEAAKKEKEAAERKKCEELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIK 1506 Query: 80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD- 138 E KKK ++ A K A C E KIK +AKK E + Sbjct: 1507 KAAE-KKKCEE-TAKKGKEVAERKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEK 1680 Query: 139 ---------DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA-KKGVVKAEKSKKKKEEEE 188 +K+ EK A K KE EK AK + +AA KK KA K +K+ E++ Sbjct: 1681 AAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKK 1860 Query: 189 DEEDEEDEEEEEDEEDEDEE 208 E+ +E+E E + EE Sbjct: 1861 KCEEAAKKEKEVAERKKCEE 1920 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014 Identities = 65/195 (33%), Positives = 90/195 (46%), Frame = +1 Query: 9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADK 67 R K A + C EE KK +A+ K+C ER K A EK + E+ AK +K Sbjct: 3340 RAKKEKEAAEKKQC-EERAKKLKEAAEK-----KQCEERAKKEKEAAEKKRCEEAAKREK 3501 Query: 68 ARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLF-CSEYRPKIKGEHPGLSIGDVA 125 E++ K E +K K A K+ A C+E + K D+A Sbjct: 3502 EAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEAAKREKEAAQKKKCADLA 3681 Query: 126 KKL---GEM--WNNTAADDKQPYEK----KAAKL-KEKYEKDIAAYRAKGKPDAAKKGVV 175 KK EM A +K+ EK KAAK KE EK A AK + +AA+K Sbjct: 3682 KKEQEPAEMKKCEEAAKKEKEAAEKQKCAKAAKKEKEAAEKKKCAEAAKKEQEAAEKKKC 3861 Query: 176 KAEKSKKKKEEEEDEEDEEDEE 197 AE +KK+KE E+ + E+ E+ Sbjct: 3862 -AEAAKKEKEAEKKRKCEKAEK 3924 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014 Identities = 61/195 (31%), Positives = 90/195 (46%), Frame = +1 Query: 9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADK 67 R K A + C EE KK +A+ K+C ER K A EK + E+ AK +K Sbjct: 3340 RAKKEKEAAEKKQC-EERAKKLKEAAEK-----KQCEERAKKEKEAAEKKRCEEAAKREK 3501 Query: 68 ARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLF-CSEYRPKIKGEHPGLSIGDVA 125 E++ K E +K K A K+ A C+E + K D+A Sbjct: 3502 EAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEAAKREKEAAQKKKCADLA 3681 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KK E A+ K+ E+ A K KE EK A AK + +AA+K AE +KK++E Sbjct: 3682 KKEQE-----PAEMKK-CEEAAKKEKEAAEKQKCAKAAKKEKEAAEKKKC-AEAAKKEQE 3840 Query: 186 EEEDEEDEEDEEEEEDEE 203 E ++ E ++E++ E Sbjct: 3841 AAEKKKCAEAAKKEKEAE 3894 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014 Identities = 58/199 (29%), Positives = 92/199 (46%), Frame = +1 Query: 9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGKFEDMAKADK 67 R K A + C EE KK +A+ K+C ER K + A EK + E+ AK +K Sbjct: 3196 RAKKLKEAAEKKQC-EERAKKLKEAAEQ-----KQCEERAKKLKEAAEKKQCEERAKKEK 3357 Query: 68 ARYEREM--KTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVA 125 E++ + K +KK + A K +A C E + K + A Sbjct: 3358 EAAEKKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAEKKKCAEAA 3537 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KK E A +KQ + A K KE EK A AK + +AA+K A+ +KK++E Sbjct: 3538 KKEKE------ATEKQKCAEAAKKEKEAAEKKKCAEAAKREKEAAQKKKC-ADLAKKEQE 3696 Query: 186 EEEDEEDEEDEEEEEDEEDEDE 207 E ++ EE ++E++ ++ + Sbjct: 3697 PAEMKKCEEAAKKEKEAAEKQK 3762 Score = 121 (42.6 bits), Expect = 0.00054, P = 0.00054 Identities = 56/184 (30%), Positives = 87/184 (47%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 KKK A+ E + KKC + K A EK K E AK K E++ K + Sbjct: 1711 KKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEK 1890 Query: 84 --TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 ++K + A K +A C E K K G++AKK+ + A +K+ Sbjct: 1891 EVAERKKCEELAKKIKKAAEKKKCKEAAKKEKEAAEREKCGELAKKIKK------AAEKK 2052 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201 +K A K KE EK AK + +AA+K AE +KK+KE E ++ EE ++E++ Sbjct: 2053 KCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKC-AEAAKKEKEAAEKKKCEEAAKKEKE 2229 Query: 202 EEDEDEEED 210 + + E+ Sbjct: 2230 AAERKKCEE 2256 Score = 120 (42.2 bits), Expect = 0.00071, P = 0.00071 Identities = 55/170 (32%), Positives = 75/170 (44%), Frame = +1 Query: 25 EHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADKARYEREM--KTYIPPK 81 + KKK + + + KKC E K A EK K E AK K E++ KT K Sbjct: 2377 KEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRK 2556 Query: 82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 +KK + A KR A C + K K AKK + A +K+ Sbjct: 2557 EAAEKKKCEKAAKKRKEEAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQ------AAEKK 2718 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 EK A K KE EK A AK + + A+K + E +KK+KE E ++ EE Sbjct: 2719 KCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCE-EAAKKEKEVAERKKCEE 2874 Score = 119 (41.9 bits), Expect = 0.00093, P = 0.00093 Identities = 50/167 (29%), Positives = 75/167 (44%), Frame = +1 Query: 42 KKCSERWKTMSAKEKGKFED-MAKADKARYEREM-KTYIPPKGETKKKFKDPNAPKRPPS 99 KKC + K A EK K + K KA E++ + K KKK K+ A K + Sbjct: 2290 KKCKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEA-AKKEKEA 2466 Query: 100 AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159 A C + K K E AKK E A +K+ EK A K KE+ EK Sbjct: 2467 AEKKKCEKTAKKRKEEAEKKKCEKTAKKRKE------AAEKKKCEKAAKKRKEEAEKKKC 2628 Query: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 AK + + A+K K EK+ KK+++ +++ E ++ E E ++ Sbjct: 2629 EKTAKKRKETAEKK--KCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKK 2769 Score = 119 (41.9 bits), Expect = 0.00093, P = 0.00093 Identities = 55/182 (30%), Positives = 84/182 (46%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 KKK +A+ E + KKC E K E+ K E++AK K E++ + K Sbjct: 2761 KKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKKLAKK-- 2934 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143 +KK + N K+ C + K K + AKK E A K+ Sbjct: 2935 -EKKAGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKE------AATKKKC 3093 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EED 201 E++A K KE EK RAK +AA++ + E++KK KE E ++ EE ++ E Sbjct: 3094 EERAKKQKEAAEKKQCEERAKKLKEAAEQKQCE-ERAKKLKEAAEKKQCEERAKKLKEAA 3270 Query: 202 EEDEDEE 208 E+ + EE Sbjct: 3271 EQKQCEE 3291 Score = 112 (39.4 bits), Expect = 0.0062, P = 0.0061 Identities = 55/180 (30%), Positives = 78/180 (43%), Frame = +1 Query: 24 EEHKKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPP 80 E KKK + E + KKC + K A EK K E AK K E++ Sbjct: 2608 EAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAEAAK 2787 Query: 81 KGE--TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138 K + +KK + A K A C E KIK +AKK A Sbjct: 2788 KEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKKLAKK------EKKAG 2949 Query: 139 DKQPYEKKAAKLKEKYEK-DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +K +KKA K K+K +K + RA K A+ + E + KKK EE ++ +E E Sbjct: 2950 EKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAE 3129 Query: 198 EEEDEE 203 +++ EE Sbjct: 3130 KKQCEE 3147 Score = 112 (39.4 bits), Expect = 0.0062, P = 0.0061 Identities = 56/187 (29%), Positives = 85/187 (45%), Frame = +1 Query: 22 CREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPK 81 C++ KKK + +KK + + KEK K ++AK KA +++ K + Sbjct: 2296 CKKLAKKKKAGEKNKLKKGNKKGKK-----ALKEKKKCRELAKK-KAAEKKKCKEAAKKE 2457 Query: 82 GETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 E +K K + A KR A C + K K AKK E +K Sbjct: 2458 KEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEKAAKKRKE------EAEK 2619 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS-KKKKEEEEDEEDEEDEEEE 199 + EK A K KE EK AK + AA+K K EK+ KK+KE E ++ E ++E Sbjct: 2620 KKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKK--KCEKAAKKRKEAAEKKKCAEAAKKE 2793 Query: 200 ED--EEDEDEE 208 ++ E+ + EE Sbjct: 2794 KELAEKKKCEE 2826 Score = 109 (38.4 bits), Expect = 0.014, P = 0.014 Identities = 56/183 (30%), Positives = 83/183 (45%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREM--KTYIPPK 81 KKK A+ E + KKC + K A EK K E AK K E++ K K Sbjct: 1663 KKKCEKAAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERK 1842 Query: 82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 +KK + A K A C E KIK + AKK E A +++ Sbjct: 1843 EAAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKEAAKKEKE------AAERE 2004 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED--EEDEEEE 199 + A K+K+ EK AK + + A+K K EK+ KK++E +++ E ++E+ Sbjct: 2005 KCGELAKKIKKAAEKKKCKKLAKKEKETAEKK--KCEKAAKKRKEAAEKKKCAEAAKKEK 2178 Query: 200 EDEEDEDEEE 209 E E + EE Sbjct: 2179 EAAEKKKCEE 2208 Score = 109 (38.4 bits), Expect = 0.014, P = 0.014 Identities = 56/190 (29%), Positives = 82/190 (43%), Frame = +1 Query: 25 EHKKKHPDAS-VNFSEFSKKCSE-RWKTMSAKEKGKFEDMAKADKARYEREM--KTYIPP 80 E KK A + +E KKC + K EK K E AK K E++ K Sbjct: 1564 ERKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCEKAAKKR 1743 Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD- 139 K +KK + +A KR +A C + + K + AKK E+ ++ Sbjct: 1744 KEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEEL 1923 Query: 140 ----KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED 195 K+ EKK K K EK+ AA R K + AKK AEK K KK ++++E E Sbjct: 1924 AKKIKKAAEKKKCKEAAKKEKE-AAEREKCG-ELAKKIKKAAEKKKCKKLAKKEKETAEK 2097 Query: 196 EEEEEDEEDEDE 207 ++ E+ + E Sbjct: 2098 KKCEKAAKKRKE 2133 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018 Identities = 55/179 (30%), Positives = 76/179 (42%), Frame = +1 Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGKFEDMAKA 65 K K A + C + KK+ +A KKC + K A EK K E AK Sbjct: 2437 KEAAKKEKEAAEKKKCEKTAKKRKEEAE------KKKCEKTAKKRKEAAEKKKCEKAAKK 2598 Query: 66 DKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 123 K E++ KT K +KK + A KR +A C + K K + Sbjct: 2599 RKEEAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAE 2778 Query: 124 VAKKLGEMWNNTAADDKQPYEKKAAKLK--EKYEKDI--AAYRAKGKPDAAKKGVVKAEK 179 AKK E+ ++ EK+ A+ K E+ K I AA + K K AKK EK Sbjct: 2779 AAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKK-LAKKEKKAGEK 2955 Query: 180 SKKKKE 185 +K KK+ Sbjct: 2956 NKLKKK 2973 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018 Identities = 55/182 (30%), Positives = 84/182 (46%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 KKK +A+ E + KKC E K + A EK K + +AK KA + ++K KG+ Sbjct: 2191 KKKCEEAAKKEKEAAERKKCEELAKKIKKAAEKKKCKKLAKKKKAGEKNKLKKG-NKKGK 2367 Query: 84 T--KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 K+K K K+ +A C E K K AKK E +K+ Sbjct: 2368 KALKEKKKCRELAKKK-AAEKKKCKEAAKKEKEAAEKKKCEKTAKKRKE------EAEKK 2526 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201 EK A K KE EK AK + + A+K K EK+ KK++E +++ E ++ Sbjct: 2527 KCEKTAKKRKEAAEKKKCEKAAKKRKEEAEKK--KCEKTAKKRKETAEKKKCEKAAKKRK 2700 Query: 202 EEDEDEE 208 + E ++ Sbjct: 2701 QAAEKKK 2721 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018 Identities = 54/192 (28%), Positives = 88/192 (45%), Frame = +1 Query: 27 KKKHPDASVNFSEFSK--KCSERWKTMS-AKEKGKFEDMAKADKARYEREM--KTYIPPK 81 KKK +A+ E ++ KC E K + A EK K + +AK +K E++ K K Sbjct: 1951 KKKCKEAAKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKCEKAAKKRK 2130 Query: 82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 +KK A K +A C E K K ++AKK+ + K Sbjct: 2131 EAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKAAEKKKCK-KL 2307 Query: 142 PYEKKAA---KLKEKYEKDIAAYRAKGK-PDAAKKGVVKAEKSKKK-KEEEEDEEDEEDE 196 +KKA KLK+ +K A + K K + AKK + +K K+ K+E+E E ++ E Sbjct: 2308 AKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCE 2487 Query: 197 EEEEDEEDEDEEE 209 + + ++E E++ Sbjct: 2488 KTAKKRKEEAEKK 2526 Score = 105 (37.0 bits), Expect = 0.039, P = 0.038 Identities = 59/182 (32%), Positives = 88/182 (48%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYIPPK-G 82 KKK A+ E + KKC+E K EK K E+ AK +K ER+ + K Sbjct: 2713 KKKCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIK 2892 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 + +K K K+ A E + K+K + G KKLG+ + AA+ K+ Sbjct: 2893 KAAEKKKCKKLAKKEKKA-----GE-KNKLK-KKAGKG-KKKCKKLGKK-SKRAAEKKKC 3045 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EE 200 E A K KE K RAK + +AA+K + E++KK KE E ++ EE ++ E Sbjct: 3046 AEA-AKKEKEAATKKKCEERAKKQKEAAEKKQCE-ERAKKLKEAAEQKQCEERAKKLKEA 3219 Query: 201 DEEDEDEE 208 E+ + EE Sbjct: 3220 AEKKQCEE 3243 Score = 105 (37.0 bits), Expect = 0.039, P = 0.038 Identities = 59/184 (32%), Positives = 82/184 (44%), Frame = +1 Query: 27 KKKHPDASVNFSEFS--KKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 KKK A+ E + KKC+E K A EK K E+ AK +K ER+ E Sbjct: 2095 KKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCE------E 2256 Query: 84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIK-GEHPGLSIGDVA--KKLGEMWNNTAADDK 140 KK K K+ C + K K GE L G+ K L E K Sbjct: 2257 LAKKIKKAAEKKK--------CKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKK 2412 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 200 + EKK K K EK+ AA + K + AKK +AEK K +K ++ +E E ++ E+ Sbjct: 2413 KAAEKKKCKEAAKKEKE-AAEKKKCEK-TAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEK 2586 Query: 201 DEEDEDEEED 210 + EE + Sbjct: 2587 AAKKRKEEAE 2616 Score = 104 (36.6 bits), Expect = 0.051, P = 0.050 Identities = 54/170 (31%), Positives = 76/170 (44%), Frame = +1 Query: 42 KKCSE-RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE--TKKKFKDPNAPKRPP 98 KKC + K EK K E AK K E++ K + +KK + A K Sbjct: 2050 KKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKE 2229 Query: 99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKK--LGEMWNNTAADDKQPYEKKAAKLKEKYE- 155 +A C E KIK +AKK GE N +K+ KKA K K+K Sbjct: 2230 AAERKKCEELAKKIKKAAEKKKCKKLAKKKKAGEK-NKLKKGNKKG--KKALKEKKKCRE 2400 Query: 156 --KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K AA + K K +AAKK AEK K +K ++ +E+ E ++ E+ + E Sbjct: 2401 LAKKKAAEKKKCK-EAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKE 2559 Score = 103 (36.3 bits), Expect = 0.067, P = 0.064 Identities = 51/174 (29%), Positives = 78/174 (44%), Frame = +1 Query: 35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94 V SE KK ++ K KEK ++ K ++A E +++ + E KKK K+ Sbjct: 925 VKSSEPKKKGKKK-KNDEKKEKELEREILK-EQAEEEAKIRGVVK---EVKKKCKEKALK 1089 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 K+ C + K+K E +AKK E D+K+ ++ A K KE Sbjct: 1090 KK--------CKDLGRKMKEEAEKKKCAALAKKQKE------EDEKKACKELAKKKKEAD 1227 Query: 155 EKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 EK A K K A KK KA K +K+ E++ E+ +E+E E + EE Sbjct: 1228 EKKKCEEAANKEKKAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEAAERKKCEE 1392 Score = 99 (34.8 bits), Expect = 0.19, P = 0.17 Identities = 45/160 (28%), Positives = 70/160 (43%), Frame = +1 Query: 49 KTMSAKEKGKFEDMAKADKARYERE-MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSE 107 K+ K+KGK + + + ERE +K + + + K+ K A C + Sbjct: 928 KSSEPKKKGKKKKNDEKKEKELEREILKEQAEEEAKIRGVVKEVKK-KCKEKALKKKCKD 1104 Query: 108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGK 166 K+K E +AKK E D+K+ ++ A K KE EK A K K Sbjct: 1105 LGRKMKEEAEKKKCAALAKKQKE------EDEKKACKELAKKKKEADEKKKCEEAANKEK 1266 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 A KK KA K +K+ E++ E+ +E+E E + EE Sbjct: 1267 KAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEAAERKKCEE 1392 Score = 98 (34.5 bits), Expect = 0.25, P = 0.22 Identities = 51/187 (27%), Positives = 79/187 (42%), Frame = +1 Query: 24 EEHKKKHPDASVNFSEFS--KKCSERWKTMSAK-EKGKFEDMAKADKARYEREM--KTYI 78 E KKK + E + KKC + K + EK K E AK K E++ K Sbjct: 2512 EAEKKKCEKTAKKRKEAAEKKKCEKAAKKRKEEAEKKKCEKTAKKRKETAEKKKCEKAAK 2691 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138 K +KK + A KR +A C+E K K + AKK E+ + Sbjct: 2692 KRKQAAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCE 2871 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK--KEEEEDEEDEEDE 196 + KKAA+ K+K +K + G+ + KK K +K KK K+ + E ++ Sbjct: 2872 ELAKKIKKAAE-KKKCKKLAKKEKKAGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCA 3048 Query: 197 EEEEDEED 204 E + E++ Sbjct: 3049 EAAKKEKE 3072 Score = 98 (34.5 bits), Expect = 0.25, P = 0.22 Identities = 57/190 (30%), Positives = 82/190 (43%), Frame = +1 Query: 25 EHKKKHPDASVNFSEFSKK-CSE-RWKTMSAKEKGKFEDMAKADKARYEREM--KTYIPP 80 E KK A E KK C E K A EK K E+ A +K E++ K Sbjct: 1132 EKKKCAALAKKQKEEDEKKACKELAKKKKEADEKKKCEEAANKEKKAAEKKKCEKAAKER 1311 Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 K +KK + A K +A C E IK + AKK E ++ Sbjct: 1312 KEAAEKKKCEEAAKKEKEAAERKKCEELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEEL 1491 Query: 141 QPYEKKAAKLKE-----KYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEEDEEDEE 194 KKAA+ K+ K K++A R K + + AKK + KAE KK KK ++++E E Sbjct: 1492 AKKIKKAAEKKKCEETAKKGKEVAE-RKKCE-ELAKK-IKKAEIKKKCKKLAKKEKETAE 1662 Query: 195 DEEEEEDEEDEDE 207 ++ E+ + E Sbjct: 1663 KKKCEKAAKKRKE 1701 Score = 97 (34.1 bits), Expect = 0.32, P = 0.27 Identities = 48/174 (27%), Positives = 76/174 (43%), Frame = +1 Query: 36 NFSEFSKK-CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94 NF+E +K + +K M K K A+ +K+ PK + KKK D Sbjct: 808 NFTEDERKRLAASYKCMGTKIKSICRKRVIAEMCEAAGYVKSS-EPKKKGKKKKNDEKKE 984 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 K +E KI+G + +V KK E A K+ + K+KE+ Sbjct: 985 KELEREILKEQAEEEAKIRGV-----VKEVKKKCKEK----AL--KKKCKDLGRKMKEEA 1131 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 EK A AK + + +K K E +KKKKE +E ++ EE +E+ ++ + E Sbjct: 1132 EKKKCAALAKKQKEEDEKKACK-ELAKKKKEADEKKKCEEAANKEKKAAEKKKCE 1293 Score = 93 (32.7 bits), Expect = 0.91, P = 0.60 Identities = 56/186 (30%), Positives = 78/186 (41%), Frame = +1 Query: 20 QTCREEHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYI 78 Q C + KK+ A KKC+E K A EK K + AK +K E++ K Sbjct: 3757 QKCAKAAKKEKEAAE------KKKCAEAAKKEQEAAEKKKCAEAAKKEKEA-EKKRKCEK 3915 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM--WNNTA 136 K K+ + +A C+ K K +AKK E W A Sbjct: 3916 AEKAAALKRQCAKLVIRAKEAALRKKCAIIAKKAKMAAEKKECEKLAKKAKEAIEWKKCA 4095 Query: 137 --ADDKQPYEKK-AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193 A K+ EKK AKL +K EK+ AA + K D AK +K KKK E+ + Sbjct: 4096 KLAKKKREAEKKKCAKLAKK-EKE-AAEKKKRCKDLAKN----KKKGHKKKGRNENRKKR 4257 Query: 194 EDEEEEEDEEDE 205 D E+ ++ E Sbjct: 4258 TDC*EKSRQKYE 4293 Score = 89 (31.3 bits), Expect = 2.6, P = 0.92 Identities = 46/175 (26%), Positives = 75/175 (42%), Frame = +1 Query: 36 NFSEFSKK-CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94 NF+E +K + +K M K K A+ +K+ PK + KKK D Sbjct: 808 NFTEDERKRLAASYKCMGTKIKSICRKRVIAEMCEAAGYVKSS-EPKKKGKKKKNDEKKE 984 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK--AAKLKE 152 K +E KI+G + K L + + K+ EKK AA K+ Sbjct: 985 KELEREILKEQAEEEAKIRGVVKEVKKKCKEKALKKKCKDLGRKMKEEAEKKKCAALAKK 1164 Query: 153 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 + E+D K + AKK K E +KKK EE ++++ E+++ E+ E ++ Sbjct: 1165 QKEED----EKKACKELAKK---KKEADEKKKCEEAANKEKKAAEKKKCEKAAKERKE 1317 >U65487;L21182 Human ribosomal RNA upstream binding transcription factor (UBTF) Length = 7032 Plus Strand HSPs: Score = 102 (35.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08 Identities = 17/24 (70%), Positives = 23/24 (95%), Frame = +3 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDD 213 +E EED+EE+ED+EDEDEEE+DD+ Sbjct: 6276 KESEEDDEEDEDDEDEDEEEEDDE 6347 Score = 102 (35.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08 Identities = 19/35 (54%), Positives = 28/35 (80%), Frame = +3 Query: 180 SKKKKEEEEDEEDEEDE-EEEEDEEDEDEEEDDDD 213 SK+ +E++E++ED+EDE EEEED+E+ D ED D Sbjct: 6273 SKESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD 6377 Score = 98 (34.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08 Identities = 19/47 (40%), Positives = 28/47 (59%), Frame = +3 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140 PKRP SA F+F E R +++ E P LS ++ + L MWN+ + K Sbjct: 2952 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKK 3092 Score = 88 (31.0 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07 Identities = 13/24 (54%), Positives = 23/24 (95%), Frame = +2 Query: 191 EDEEDEEEEEDEEDEDEEEDDDDE 214 ++EED+E+E+D+ED+DE+ED++ E Sbjct: 6506 QNEEDDEDEDDDEDDDEDEDNESE 6577 Score = 84 (29.6 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06 Identities = 16/49 (32%), Positives = 29/49 (59%), Frame = +2 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 D A + +G G + + + +E++EDE+D+ED++E+ED E E Sbjct: 6431 DRAQWEGRGVLPGGPPGDSTSFLTPQNEEDDEDEDDDEDDDEDEDNESE 6577 Score = 83 (29.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06 Identities = 19/44 (43%), Positives = 30/44 (68%), Frame = +3 Query: 180 SKKKKEEEEDEEDEEDE-EEEEDEEDEDEEED---------DDD 213 SK+ +E++E++ED+EDE EEEED+E+ D ED +D+ Sbjct: 6273 SKESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDE 6404 Score = 81 (28.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06 Identities = 21/49 (42%), Positives = 28/49 (57%), Frame = +3 Query: 183 KKEEEEDEEDEEDEEEEEDEED------------------EDEEEDDDD 213 K+ EE+DEEDE+DE+E+E+EED EDE ED D+ Sbjct: 6276 KESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 6422 Score = 81 (28.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06 Identities = 25/50 (50%), Positives = 31/50 (62%), Frame = +3 Query: 180 SKKKKEE-EEDEEDE-EDEEEEEDE-----ED---------EDEEEDDDD 213 SK+ +E+ EEDE+DE EDEEEE+DE ED EDE ED D+ Sbjct: 6273 SKESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 6422 Score = 79 (27.8 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06 Identities = 11/24 (45%), Positives = 21/24 (87%), Frame = +2 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEE 208 + EED+EDE+D+E+++++ED + E Sbjct: 6506 QNEEDDEDEDDDEDDDEDEDNESE 6577 Score = 79 (27.8 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06 Identities = 14/26 (53%), Positives = 21/26 (80%), Frame = +2 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEED 210 + EED+EDE+D+E+ D+EDED E + Sbjct: 6506 QNEEDDEDEDDDED--DDEDEDNESE 6577 Score = 78 (27.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06 Identities = 11/24 (45%), Positives = 22/24 (91%), Frame = +2 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDE 207 + EE+DE++++DE+++EDE++E E Sbjct: 6506 QNEEDDEDEDDDEDDDEDEDNESE 6577 Score = 77 (27.1 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06 Identities = 23/71 (32%), Positives = 38/71 (53%), Frame = +3 Query: 146 KAAKLKEKYEKDIAAYRAKGK---PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 +AA+ K + + D +A + GK PDA G + + + E EE+DE Sbjct: 6123 QAARPKPQIQPDYSAVQV-GKEPLPDAGAWGGGHCLEWLGRDQRPLMCLHPSKESEEDDE 6299 Query: 203 EDEDEEEDDDDE 214 EDED+E++D++E Sbjct: 6300 EDEDDEDEDEEE 6335 Score = 74 (26.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05 Identities = 17/60 (28%), Positives = 30/60 (50%), Frame = +2 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD----D 212 D A + +G G + + + +E++EDE+D+ED++E+ED E E D Sbjct: 6431 DRAQWEGRGVLPGGPPGDSTSFLTPQNEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 6610 Score = 69 (24.3 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07 Identities = 15/56 (26%), Positives = 31/56 (55%), Frame = +3 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 56 G+G +KP+ +S+ F + R + +++ P+ S SE ++ + W +S K+K Sbjct: 2931 GQGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKK 3092 Score = 58 (20.4 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07 Identities = 16/66 (24%), Positives = 31/66 (46%), Frame = +1 Query: 90 DPNAPKRPP-SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAA 148 DP + PP + + F E GE L + + ++G W + K+ Y+K A Sbjct: 4315 DPPSTNPPPRNGYQKFSQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAE 4488 Query: 149 KLKEKYE 155 + +++Y+ Sbjct: 4489 EQQKQYK 4509 Score = 56 (19.7 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07 Identities = 14/32 (43%), Positives = 20/32 (62%), Frame = +2 Query: 125 AKKLGEM-WNNTAADDKQPYEKKAAKLKEKYE 155 A K EM WNN +K + KKAA+ +++YE Sbjct: 3665 ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYE 3760 Score = 53 (18.7 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08 Identities = 17/52 (32%), Positives = 25/52 (48%), Frame = +2 Query: 8 PRGK-MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 59 PRG +SY+ + C E V +E CS++WK +S KEK + Sbjct: 2120 PRGSDRNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAY 2260 Score = 51 (18.0 bits), Expect = 0.018, Sum P(2) = 0.018 Identities = 7/37 (18%), Positives = 22/37 (59%), Frame = +1 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 RW+ +S +K ++ +A+ + +Y+ + ++ +G+ Sbjct: 4435 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKVRGQ 4545 Score = 48 (16.9 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07 Identities = 15/47 (31%), Positives = 24/47 (51%), Frame = +3 Query: 50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96 T + K++ A KA+ ER+ P GE +++ K P +PKR Sbjct: 3390 TPGPSPQAKYKAREAALKAQSERK------PGGEREERGKLPESPKR 3512 Score = 46 (16.2 bits), Expect = 0.00082, Sum P(3) = 0.00081 Identities = 10/24 (41%), Positives = 12/24 (50%), Frame = +2 Query: 48 WKTMSAKEKGKFEDMAKADKARYE 71 W M KEK + A D+ RYE Sbjct: 3689 WNNMEKKEKLMWIKKAAEDQKRYE 3760 Score = 45 (15.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07 Identities = 10/47 (21%), Positives = 20/47 (42%), Frame = +2 Query: 39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85 E ++W +S K++ K+ A + YE + P G ++ Sbjct: 1442 EVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEVRLPLRSSPSGSSR 1582 Score = 45 (15.8 bits), Expect = 6.5e-06, Sum P(4) = 6.5e-06 Identities = 14/48 (29%), Positives = 26/48 (54%), Frame = +2 Query: 97 PPSAFFLFCSEYRPKIKG-EHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144 PP+A L + ++K + ++ ++ KK MW AA+D++ YE Sbjct: 3617 PPTADTLIGPQ-NDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYE 3760 Score = 45 (15.8 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05 Identities = 11/30 (36%), Positives = 14/30 (46%), Frame = +3 Query: 71 EREMKTYIPPKGETK--KKFKDPNAPKRPP 98 +RE+ P T KK K PK+PP Sbjct: 4149 QRELSEMRAPPAATNSSKKMKFQGEPKKPP 4238 Score = 43 (15.1 bits), Expect = 0.12, Sum P(2) = 0.11 Identities = 8/33 (24%), Positives = 18/33 (54%), Frame = +2 Query: 123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155 +V LG+ W+ + + + KA + +++YE Sbjct: 1442 EVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYE 1540 >M63424 Tetrahymena thermophila high-mobility-group protein C (HMG C), 3' Length = 686 Plus Strand HSPs: Score = 147 (51.7 bits), Expect = 3.7e-08, P = 3.7e-08 Identities = 37/94 (39%), Positives = 50/94 (53%), Frame = +1 Query: 89 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAA 148 K P PKRP SAFFLF +K E+P I ++ + E W +K+ YE + Sbjct: 208 K*PAPPKRPLSAFFLFK*HNYE*VKKENPNAKITELTSMIAEKWKAVGEKEKKKYETL*S 387 Query: 149 KLKEKYEKDIAAYRAK-GKPDAAKKGVVKAEKSKK 182 + K KYEK + AY K GKP+ KK + K +K K Sbjct: 388 EAKAKYEKAL*AYEKKYGKPEK*KK-IKKNKKGSK 489 Score = 109 (38.4 bits), Expect = 0.0053, P = 0.0053 Identities = 25/82 (30%), Positives = 45/82 (54%), Frame = +1 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64 P P+ +S++ F E KK++P+A + +E + +E+WK + KEK K+E + Sbjct: 214 PAPPKRPLSAFFLFK*HNYE*VKKENPNAKI--TELTSMIAEKWKAVGEKEKKKYETL*S 387 Query: 65 ADKARYEREMKTYIPPKGETKK 86 KA+YE+ + Y G+ +K Sbjct: 388 EAKAKYEKAL*AYEKKYGKPEK 453 >M17440;J05095 Mouse MHC (H-2) S region complement component C4 gene, complete Length = 17,522 Minus Strand HSPs: Score = 152 (53.5 bits), Expect = 4.3e-08, P = 4.3e-08 Identities = 30/78 (38%), Positives = 55/78 (70%), Frame = -1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 + K+ E+K K +EK+E++ + + + + K+G + E+ KKK+EEE DEE+E+ E Sbjct: 7157 EKKEEEEEKEEKEEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEEE*DEEEEKKE 6978 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE++E+E +EE++++E Sbjct: 6977 EEEEEKEEEGKEEEEEEE 6924 Score = 138 (48.6 bits), Expect = 4.9e-06, P = 4.9e-06 Identities = 32/85 (37%), Positives = 55/85 (64%), Frame = -1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 + K+ E+K K +EK+E++ + + + + K+G + E+ KKK+EEE DEE+E+ E Sbjct: 7157 EKKEEEEEKEEKEEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEEE*DEEEEKKE 6978 Query: 197 EEEED-------EEDEDEEEDDDDE 214 EEEE+ EE+E+EEE+ ++E Sbjct: 6977 EEEEEKEEEGKEEEEEEEEENKEEE 6903 Score = 122 (42.9 bits), Expect = 0.00045, P = 0.00045 Identities = 25/73 (34%), Positives = 49/73 (67%), Frame = -1 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA-EKSKKKKEEEEDEEDEEDEE 197 +++ +E++ K KE ++ K + + KK + ++ ++KKEEEE+E++EE +E Sbjct: 7121 EEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEEE*DEEEEKKEEEEEEKEEEGKE 6942 Query: 198 EEEDEEDEDEEED 210 EEE+EE+E++EE+ Sbjct: 6941 EEEEEEEENKEEE 6903 Score = 121 (42.6 bits), Expect = 0.00076, Sum P(2) = 0.00076 Identities = 19/37 (51%), Positives = 34/37 (91%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EK +K+KEEEE+E+ EE+ EE+E++++E++EED++D+ Sbjct: 6900 EKGEKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDK 6790 Score = 120 (42.2 bits), Expect = 0.0010, Sum P(2) = 0.0010 Identities = 22/44 (50%), Positives = 37/44 (84%), Frame = -3 Query: 172 KGVVKAEKSKKKKEEEE-DEEDEEDEEEEEDEEDEDEEEDDDDE 214 +G K EK K+++EEE+ +EE+EEDEE++E+E++EDEE+ ++E Sbjct: 6909 RGEEKGEKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDKVEEE 6778 Score = 115 (40.5 bits), Expect = 0.0042, Sum P(2) = 0.0042 Identities = 27/49 (55%), Positives = 36/49 (73%), Frame = -3 Query: 172 KGVVKAEKSKKKKEEE----EDEEDEEDEEEE--EDEEDEDEEEDDDDE 214 +G K EK K+++EEE E+EEDEED+EEE EDEED+ EEE++ E Sbjct: 6909 RGEEKGEKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDKVEEEEEKFE 6763 Score = 112 (39.4 bits), Expect = 0.0066, P = 0.0066 Identities = 24/78 (30%), Positives = 53/78 (67%), Frame = -1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEE-EEDEEDEEDE 196 ++++ E++ ++ +E+ E+ KG+ + + + E+ KK+EE E++EE+EEDE Sbjct: 7343 EEEEEREEERSEEEEEEEEGEEEEIEKGEEEEKE*YEEREEEE*KKEEE*EKEEEEEEDE 7164 Query: 197 EEEEDEEDEDEEEDDDDE 214 +EE+ EE+E++EE ++++ Sbjct: 7163 KEEKKEEEEEKEEKEEEK 7110 Score = 109 (38.4 bits), Expect = 0.015, P = 0.015 Identities = 20/39 (51%), Positives = 33/39 (84%), Frame = -1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K E+ +K++EEEEDE++E+ EEEEE EE E+E+ ++++E Sbjct: 7208 KEEE*EKEEEEEEDEKEEKKEEEEEKEEKEEEKFEEEEE 7092 Score = 108 (38.0 bits), Expect = 0.019, P = 0.019 Identities = 22/64 (34%), Positives = 44/64 (68%), Frame = -1 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +E+ E+D + + + + +K K E+ ++K++E E+EE+EE E +EE+EE++ +EE+ Sbjct: 7187 EEEEEEDEKEEKKEEEEEKEEKEEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEE 7008 Query: 211 DDDE 214 + DE Sbjct: 7007 E*DE 6996 Score = 107 (37.7 bits), Expect = 0.025, P = 0.024 Identities = 26/76 (34%), Positives = 49/76 (64%), Frame = -1 Query: 138 DDKQPYEKKAA---KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 ++K+ YE++ K +E+ EK+ + K + ++ K EK ++K EEEE++E E Sbjct: 7253 EEKE*YEEREEEE*KKEEE*EKEEEEEEDE-KEEKKEEEEEKEEKEEEKFEEEEEKEKEV 7077 Query: 195 DEEEEEDEEDEDEEEDD 211 + EEEE++E ++EEE++ Sbjct: 7076 ENEEEEEKEGKEEEEEE 7026 Score = 106 (37.3 bits), Expect = 0.049, Sum P(2) = 0.048 Identities = 26/67 (38%), Positives = 43/67 (64%), Frame = -3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E+K K KE+ E++ + + D K K E+ ++ K EEE+E+ EE+E+EE+++E Sbjct: 6903 EEKGEKEKEEEEEEDK--EEENEEDEEDKEEEK-EEDEEDKVEEEEEKFEEEEKEEKEKE 6733 Query: 204 DEDEEED 210 +E EEED Sbjct: 6732 EEKEEED 6712 Score = 106 (37.3 bits), Expect = 0.049, Sum P(2) = 0.048 Identities = 26/72 (36%), Positives = 45/72 (62%), Frame = -3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED---EEDEEDEEEEE 200 E+K K KE+ E++ + + D K K E + K EEEE+ EE++E++E+EE Sbjct: 6903 EEKGEKEKEEEEEEDK--EEENEEDEEDKEEEKEEDEEDKVEEEEEKFEEEEKEEKEKEE 6730 Query: 201 DEEDEDEEEDDDDE 214 ++E+ED+ E ++E Sbjct: 6729 EKEEEDKAEAQEEE 6688 Score = 104 (36.6 bits), Expect = 0.085, Sum P(2) = 0.081 Identities = 17/37 (45%), Positives = 33/37 (89%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EK +++KEEEE++E++E+E +EE+E+++++EE+D E Sbjct: 6679 EKEEEEKEEEEEKEEKEEEGKEEEEKEKEKEEEDKAE 6569 Score = 102 (35.9 bits), Expect = 0.14, Sum P(2) = 0.13 Identities = 27/74 (36%), Positives = 46/74 (62%), Frame = -3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED--EEDEEDE---EE 198 E+K K KE+ E++ + + D K K E + K EEEE+ EE+E++E EE Sbjct: 6903 EEKGEKEKEEEEEEDK--EEENEEDEEDKEEEKEEDEEDKVEEEEEKFEEEEKEEKEKEE 6730 Query: 199 EEDEEDEDEEEDDDDE 214 E++EED+ E +++++E Sbjct: 6729 EKEEEDKAEAQEEEEE 6682 Score = 99 (34.8 bits), Expect = 0.31, Sum P(2) = 0.27 Identities = 19/53 (35%), Positives = 38/53 (71%), Frame = -2 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDE--EDEEEEEDEEDEDEEEDDDDE 214 +G+ G K E+ K+++EE+E++E+E E+EE+E+++E+ED+ E ++E Sbjct: 6712 QGRGTGGGGGEEKEEEEKEEEEEKEEKEEEGKEEEEKEKEKEEEDKAEAQEEE 6554 Score = 99 (34.8 bits), Expect = 0.31, Sum P(2) = 0.27 Identities = 23/74 (31%), Positives = 45/74 (60%), Frame = -3 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +K+ E++ +E+ E+D + + D K E+ ++K EEEE EE E++EE+ Sbjct: 6891 EKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDK----VEEEEEKFEEEEKEEKEKEEEK 6724 Query: 199 EEDEEDEDEEEDDD 212 EE+++ E +EE+++ Sbjct: 6723 EEEDKAEAQEEEEE 6682 Score = 98 (34.5 bits), Expect = 0.41, Sum P(2) = 0.34 Identities = 17/53 (32%), Positives = 38/53 (71%), Frame = -2 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 R G +K + E+ ++K+E+EE+ ++EE++E+E++EED+ E +++++E Sbjct: 6706 RGTGGGGGEEKEEEEKEEEEEKEEKEEEGKEEEEKEKEKEEEDKAEAQEEEEE 6548 Score = 97 (34.1 bits), Expect = 0.34, P = 0.29 Identities = 23/58 (39%), Positives = 35/58 (60%), Frame = -1 Query: 160 AYRA---KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 AYR + KP + + E+ ++ EEEE+ E+E EEEEE+EE E+EE + +E Sbjct: 7427 AYRD*D*RTKPQTLR*EEEEEEEGEEG*EEEEEREEERSEEEEEEEEGEEEEIEKGEE 7254 Score = 93 (32.7 bits), Expect = 1.5, Sum P(2) = 0.77 Identities = 24/93 (25%), Positives = 51/93 (54%), Frame = -3 Query: 113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 +GE G G GE ++++ +K+ E+ E+D + + + D ++ Sbjct: 6954 RGEGGGGGRGGRE*GRGEEKGEKEKEEEEEEDKEEEN--EEDEEDKEEEKEEDEEDKVEE 6781 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 K E+ +K+++E+E+E++EED+ E ++EE+E Sbjct: 6780 EEEKFEEEEKEEKEKEEEKEEEDKAEAQEEEEE 6682 Score = 91 (32.0 bits), Expect = 1.6, P = 0.80 Identities = 16/39 (41%), Positives = 30/39 (76%), Frame = -1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E+ +++EE E+E EE+EEEEE EE+E E+ +++++ Sbjct: 7361 EGEEG*EEEEEREEERSEEEEEEEEGEEEEIEKGEEEEK 7245 Score = 91 (32.0 bits), Expect = 1.6, P = 0.80 Identities = 18/39 (46%), Positives = 30/39 (76%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDE--EEDDDDE 214 E+ +++ EEEE+EE+ E+EE E+ EE+E E EE +++E Sbjct: 7331 EREEERSEEEEEEEEGEEEEIEKGEEEEKE*YEEREEEE 7215 Score = 46 (16.2 bits), Expect = 0.00076, Sum P(2) = 0.00076 Identities = 21/65 (32%), Positives = 30/65 (46%), Frame = -1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA--RYEREMKTYIPP 80 +EE +K + + E KK E K KE+ KFE+ + +K E E K Sbjct: 7208 KEEE*EKEEEEEEDEKE-EKKEEEEEK--EEKEEEKFEEEEEKEKEVENEEEEEKEGKEE 7038 Query: 81 KGETKKK 87 + E KKK Sbjct: 7037 EEEEKKK 7017 Score = 45 (15.8 bits), Expect = 0.11, Sum P(2) = 0.10 Identities = 14/51 (27%), Positives = 25/51 (49%), Frame = -3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 73 +EE K++ + V E E+++ +EK K E+ + DKA + E Sbjct: 6825 KEEEKEEDEEDKVEEEE------EKFEEEEKEEKEKEEEKEEEDKAEAQEE 6691 Score = 45 (15.8 bits), Expect = 0.11, Sum P(2) = 0.10 Identities = 18/73 (24%), Positives = 34/73 (46%), Frame = -3 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 EE K++ + E K+ E K +E+ KFE+ K +K E+E + K E Sbjct: 6867 EEDKEEENEEDEEDKEEEKEEDEEDKV--EEEEEKFEEEEKEEK---EKEEEKEEEDKAE 6703 Query: 84 TKKKFKDPNAPKR 96 +++ ++ +R Sbjct: 6702 AQEEEEERRRKRR 6664 >U83985 Rattus norvegicus alpha 1B adrenergic receptor gene, 5' upstream Length = 513 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 4.8e-08, P = 4.8e-08 Identities = 23/46 (50%), Positives = 41/46 (89%), Frame = +2 Query: 169 AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 A ++ V+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 92 ATQQDPVQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 229 Score = 132 (46.5 bits), Expect = 1.7e-07, P = 1.7e-07 Identities = 22/41 (53%), Positives = 38/41 (92%), Frame = +2 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 110 VQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 232 Score = 130 (45.8 bits), Expect = 3.0e-07, P = 3.0e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 125 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 235 Score = 130 (45.8 bits), Expect = 3.0e-07, P = 3.0e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 128 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 238 Score = 126 (44.4 bits), Expect = 9.1e-07, P = 9.1e-07 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++++ Sbjct: 131 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 241 Score = 124 (43.7 bits), Expect = 1.6e-06, P = 1.6e-06 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +2 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 D ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++ Sbjct: 104 DPVQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 238 Score = 122 (42.9 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 22/41 (53%), Positives = 35/41 (85%), Frame = +2 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +V A + +EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 83 LV*ATQQDPVQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 205 Score = 113 (39.8 bits), Expect = 0.00051, P = 0.00051 Identities = 20/78 (25%), Positives = 47/78 (60%), Frame = +1 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 + + +D +P ++ + + + + R + + ++ + + ++++ +EE+EE Sbjct: 76 FKTSVSDTARPSPRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKEEEEE 255 Query: 192 DEEDEEEEEDEEDEDEEE 209 +EE+EEEEE+EE+E+EEE Sbjct: 256 EEEEEEEEEEEEEEEEEE 309 Score = 107 (37.7 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05 Identities = 18/34 (52%), Positives = 29/34 (85%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + + ++K+EEEE+EE+EE+EEEEE+EE+E+ E Sbjct: 217 RRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEGRE 318 Score = 105 (37.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06 Identities = 18/33 (54%), Positives = 28/33 (84%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 + + +K++EEEE+EE+EE+EEEEE+EE+E E Sbjct: 220 RRRRRRKEEEEEEEEEEEEEEEEEEEEEEEGRE 318 Score = 104 (36.6 bits), Expect = 0.0099, P = 0.0098 Identities = 16/39 (41%), Positives = 31/39 (79%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + ++++ ++EE+EE+EEEEE+EE+E+EEE++ E Sbjct: 202 RRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEGRE 318 Score = 93 (32.7 bits), Expect = 0.25, P = 0.22 Identities = 14/39 (35%), Positives = 28/39 (71%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + ++++ EE+EEEEE+EE+E+EEE++++E Sbjct: 190 RRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEEE 306 Score = 88 (31.0 bits), Expect = 1.1, P = 0.66 Identities = 13/39 (33%), Positives = 28/39 (71%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + ++++ +E+EEEEE+EE+E+EEE++++E Sbjct: 187 RRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEE 303 Score = 58 (20.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06 Identities = 16/53 (30%), Positives = 24/53 (45%), Frame = +3 Query: 44 CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96 C KT S K+K K + K K + +++ K K + KKK K +R Sbjct: 87 CERHSKTQSKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRR 245 Score = 45 (15.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05 Identities = 14/47 (29%), Positives = 23/47 (48%), Frame = +3 Query: 41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 SK S++ K K+K K + K K + +++ K K + KKK Sbjct: 99 SKTQSKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 239 Score = 40 (14.1 bits), Expect = 0.00034, Sum P(2) = 0.00034 Identities = 13/49 (26%), Positives = 21/49 (42%), Frame = +3 Query: 39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 E K + K K+K K + K K + +++ K K + KKK Sbjct: 90 ERHSKTQSKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 236 >M17284 Mouse transcriptional control element. Length = 309 Plus Strand HSPs: Score = 138 (48.6 bits), Expect = 6.2e-08, P = 6.2e-08 Identities = 24/47 (51%), Positives = 40/47 (85%), Frame = +1 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D K +AE+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 67 DLLKSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 207 Score = 137 (48.2 bits), Expect = 8.0e-08, P = 8.0e-08 Identities = 22/43 (51%), Positives = 40/43 (93%), Frame = +1 Query: 172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + ++K+E+ + ++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 64 RDLLKSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 192 Score = 136 (47.9 bits), Expect = 1.0e-07, P = 1.0e-07 Identities = 23/51 (45%), Positives = 43/51 (84%), Frame = +1 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K + + A++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 76 KSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 228 Score = 133 (46.8 bits), Expect = 2.1e-07, P = 2.1e-07 Identities = 24/62 (38%), Positives = 47/62 (75%), Frame = +1 Query: 153 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 K E++ A + + + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++ Sbjct: 76 KSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 255 Query: 213 DE 214 +E Sbjct: 256 EE 261 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 124 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 234 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 127 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 237 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 130 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 240 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 133 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 243 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 136 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 246 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 139 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 249 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 142 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 252 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 145 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 255 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 148 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 258 Score = 121 (42.6 bits), Expect = 5.8e-06, P = 5.8e-06 Identities = 21/32 (65%), Positives = 30/32 (93%), Frame = +1 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K EEEE EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 76 KSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEE 171 Score = 119 (41.9 bits), Expect = 1.0e-05, P = 1.0e-05 Identities = 20/33 (60%), Positives = 32/33 (96%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 163 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 261 Score = 117 (41.2 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 20/32 (62%), Positives = 31/32 (96%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 166 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 261 >S72345 RI beta =cAMP-dependent protein kinase RI beta subunit {exons I and Length = 3511 Minus Strand HSPs: Score = 147 (51.7 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08 Identities = 26/39 (66%), Positives = 36/39 (92%), Frame = -3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K E+ ++++EEEE+EE+EE+EEEEE EE+E+EEEDDDDE Sbjct: 227 KKEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEDDDDE 111 Score = 118 (41.5 bits), Expect = 0.00085, Sum P(2) = 0.00085 Identities = 20/40 (50%), Positives = 35/40 (87%), Frame = -3 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KK + E+ ++++EEEE+EE+EE++EEEE+EE++D++ED Sbjct: 227 KKEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEDDDDED 108 Score = 42 (14.8 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08 Identities = 12/35 (34%), Positives = 18/35 (51%), Frame = -3 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175 Q Y + K K+ Y+K + K K D A+ G+V Sbjct: 461 QIYNEINNKTKQVYDKINKNNKIK*KKDTAQPGMV 357 >AJ223169 Saccharomyces cerevisiae mRNA for cisplatin-damaged DNA recognition Length = 1087 Plus Strand HSPs: Score = 148 (52.1 bits), Expect = 9.7e-08, P = 9.7e-08 Identities = 40/153 (26%), Positives = 73/153 (47%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y ++Q R + K++P ++ +E SK E+W+ + A K K+ Sbjct: 646 KQGPKRPT---SAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYIS 810 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 K + Y++ KK+F + PK+P F + +E R ++ +HP S Sbjct: 811 ERKKLYSEYQK-----------AKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQ 957 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 D+ K +G+ W + K Y ++ K ++Y Sbjct: 958 LDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEY 1056 Score = 132 (46.5 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 25/63 (39%), Positives = 38/63 (60%), Frame = +1 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153 PKRP SA+FL+ ++R + E+P L +++K GE W N AD K+ Y + KL + Sbjct: 655 PKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSE 834 Query: 154 YEK 156 Y+K Sbjct: 835 YQK 843 >M73753 Saccharomyces cerevisiae mitochondrial protein gene, complete CDS. Length = 1194 Plus Strand HSPs: Score = 148 (52.1 bits), Expect = 1.1e-07, P = 1.1e-07 Identities = 40/153 (26%), Positives = 73/153 (47%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y ++Q R + K++P ++ +E SK E+W+ + A K K+ Sbjct: 344 KQGPKRPT---SAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYIS 508 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 K + Y++ KK+F + PK+P F + +E R ++ +HP S Sbjct: 509 ERKKLYSEYQK-----------AKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQ 655 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 D+ K +G+ W + K Y ++ K ++Y Sbjct: 656 LDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEY 754 Score = 132 (46.5 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 25/63 (39%), Positives = 38/63 (60%), Frame = +2 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153 PKRP SA+FL+ ++R + E+P L +++K GE W N AD K+ Y + KL + Sbjct: 353 PKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSE 532 Query: 154 YEK 156 Y+K Sbjct: 533 YQK 541 >X80463 M.musculus HMG1-R-159 gene Length = 192 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 1.3e-07, P = 1.3e-07 Identities = 25/36 (69%), Positives = 30/36 (83%), Frame = +3 Query: 27 KKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62 +++ P NFSEFS KCSERW+TM+AKEKGKFEDM Sbjct: 81 QEEAPGCFFNFSEFSMKCSERWETMTAKEKGKFEDM 188 Score = 127 (44.7 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 27/37 (72%), Positives = 28/37 (75%), Frame = +1 Query: 1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNF 37 GK DPKK RGKMSSYAFF+QT HKKKH DAS F Sbjct: 4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHLDASSTF 114 >AB006705 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MTH12. Length = 74,877 Plus Strand HSPs: Score = 149 (52.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07 Identities = 26/54 (48%), Positives = 46/54 (85%), Frame = +3 Query: 162 RAKGKPD-AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ G P+ A + VV+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 63516 KSMGSPEEAVEVAVVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63677 Score = 140 (49.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06 Identities = 26/55 (47%), Positives = 46/55 (83%), Frame = +3 Query: 162 RAKGKPD-AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE- 214 ++ G P+ A + VV+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 63516 KSMGSPEEAVEVAVVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63680 Score = 132 (46.5 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05 Identities = 26/59 (44%), Positives = 46/59 (77%), Frame = +3 Query: 162 RAKGKPD-AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE----- 214 ++ G P+ A + VV+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 63516 KSMGSPEEAVEVAVVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63692 Score = 130 (45.8 bits), Expect = 0.00013, Sum P(2) = 0.00013 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 63585 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63695 Score = 130 (45.8 bits), Expect = 0.00013, Sum P(2) = 0.00013 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 63588 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63698 Score = 130 (45.8 bits), Expect = 0.00013, Sum P(2) = 0.00013 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 63591 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63701 Score = 120 (42.2 bits), Expect = 0.0025, Sum P(2) = 0.0025 Identities = 20/30 (66%), Positives = 30/30 (100%), Frame = +3 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 63561 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63650 Score = 119 (41.9 bits), Expect = 0.0033, Sum P(2) = 0.0033 Identities = 20/33 (60%), Positives = 32/33 (96%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 63603 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63701 Score = 100 (35.2 bits), Expect = 0.56, Sum P(2) = 0.43 Identities = 17/28 (60%), Positives = 27/28 (96%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 E+ ++++EEEE+EE+EE+EEEEE+EE+E Sbjct: 63618 EEEEEEEEEEEEEEEEEEEEEEEEEEEE 63701 Score = 48 (16.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07 Identities = 12/43 (27%), Positives = 22/43 (51%), Frame = +2 Query: 95 KRPPSAFFLFCSEYRPKI---KGEHPGLSIGDVAKKLGEMWNN 134 K+P S L CS ++ +I K ++ +++ + L WNN Sbjct: 31100 KKPISCLLLLCSNFQTQILLHKSQNLEINLSADPQLLYLSWNN 31228 Score = 41 (14.4 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07 Identities = 9/21 (42%), Positives = 9/21 (42%), Frame = +3 Query: 5 PKKPRGKMSSYAFFVQTCREE 25 PK P G FF TC E Sbjct: 31758 PKLPNGLSKILCFFRNTCSFE 31820 >Z48952;Z71257 S.cerevisiae chromosome XIII cosmid 9916. Length = 22,131 Plus Strand HSPs: Score = 148 (52.1 bits), Expect = 2.1e-07, P = 2.1e-07 Identities = 40/153 (26%), Positives = 73/153 (47%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y ++Q R + K++P ++ +E SK E+W+ + A K K+ Sbjct: 15762 KQGPKRPT---SAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYIS 15926 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 K + Y++ KK+F + PK+P F + +E R ++ +HP S Sbjct: 15927 ERKKLYSEYQK-----------AKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQ 16073 Query: 122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 D+ K +G+ W + K Y ++ K ++Y Sbjct: 16074 LDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEY 16172 Score = 132 (46.5 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 25/63 (39%), Positives = 38/63 (60%), Frame = +3 Query: 94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153 PKRP SA+FL+ ++R + E+P L +++K GE W N AD K+ Y + KL + Sbjct: 15771 PKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSE 15950 Query: 154 YEK 156 Y+K Sbjct: 15951 YQK 15959 >D13491 A.thaliana mRNA for high mobility group protein, complete cds. Length = 2114 Plus Strand HSPs: Score = 147 (51.7 bits), Expect = 2.1e-07, P = 2.1e-07 Identities = 40/115 (34%), Positives = 58/115 (50%), Frame = +2 Query: 54 KEKG-KFEDMAKADKAR-YEREMKTYIPPKGETK----KKFKDPNAPKRPPSAFFLFCSE 107 KEK K E +A ++ + KT +G +K KK KDPNAPKR S F F Sbjct: 1595 KEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQM 1774 Query: 108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162 R IK EHPG++ G+V K LG+ K + + K++Y+ +I+ Y+ Sbjct: 1775 ERDNIKKEHPGIAFGEVGKVLGDKCVKCLLMIKSHMKPRLQVDKQRYKDEISDYK 1939 Score = 104 (36.6 bits), Expect = 0.045, P = 0.044 Identities = 25/80 (31%), Positives = 37/80 (46%), Frame = +2 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K DP P+ MS + FF Q R+ KK+HP + F E K ++ K + Sbjct: 1715 KKDPNAPKRAMSGFMFFSQMERDNIKKEHP--GIAFGEVGKVLGDKCVKCLLMIKSHMKP 1888 Query: 62 MAKADKARYEREMKTYIPPK 81 + DK RY+ E+ Y P+ Sbjct: 1889 RLQVDKQRYKDEISDYKNPQ 1948 >AC004155 Mus musculus DNA from BAC 10818 containing the Ercc-4 gene, Length = 128,026 Plus Strand HSPs: Score = 148 (52.1 bits), Expect = 2.2e-07, P = 2.2e-07 Identities = 30/69 (43%), Positives = 51/69 (73%), Frame = +3 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 KA K +E+ E++ R +G + ++ EK +++KEEEE+EE+EE+EEEEE+EE+E Sbjct: 60027 KAMK*EEEEEEEEKRRRRRGGGEEEEE-----EKRRRRKEEEEEEEEEEEEEEEEEEEEE 60191 Query: 206 DEEEDDDDE 214 +EEE++++E Sbjct: 60192 EEEEEEEEE 60218 Score = 140 (49.3 bits), Expect = 2.8e-06, P = 2.8e-06 Identities = 23/37 (62%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EK +++KEEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 60108 EKRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 60218 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 27/64 (42%), Positives = 46/64 (71%), Frame = +3 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 KA K +E+ E++ R +G + ++ + K ++++EEEE+EE+EE+EEEEE+EE+E Sbjct: 60027 KAMK*EEEEEEEEKRRRRRGGGEEEEEEKRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEE 60206 Query: 206 DEEE 209 +EEE Sbjct: 60207 EEEE 60218 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 27/67 (40%), Positives = 49/67 (73%), Frame = +3 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 KA K +E+ E++ R +G + ++ + + +K++EEEE+EE+EE+EEEEE+EE+E Sbjct: 60027 KAMK*EEEEEEEEKRRRRRGGGEEEEE---EKRRRRKEEEEEEEEEEEEEEEEEEEEEEE 60197 Query: 206 DEEEDDD 212 +EEE+++ Sbjct: 60198 EEEEEEE 60218 Score = 43 (15.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06 Identities = 12/45 (26%), Positives = 20/45 (44%), Frame = +1 Query: 37 FSE-FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP 80 FSE ++ + WK + KGK + K + + KT+ P Sbjct: 59137 FSE*IPRRTKQ*WKMNVPQNKGKTKKTRKQQQQPPPPKKKTFTKP 59271 Score = 42 (14.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06 Identities = 11/39 (28%), Positives = 16/39 (41%), Frame = +2 Query: 58 KFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96 K + K K + + PP K+K KD N P + Sbjct: 32780 KSKKKKKKKKKKESGSIARQEPPPPPRKRKNKDTNKPTK 32896 Score = 41 (14.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06 Identities = 11/29 (37%), Positives = 13/29 (44%), Frame = +1 Query: 75 KTYIPP-KGETKKKFKDPNAPKRPPSAFF 102 K +P KG+TKK K P P F Sbjct: 59176 KMNVPQNKGKTKKTRKQQQQPPPPKKKTF 59262 Score = 40 (14.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06 Identities = 12/42 (28%), Positives = 21/42 (50%), Frame = +1 Query: 45 SERWKTMSAKEKGKFEDMAKA----DKARYEREMKTYIPPKG 82 +E+ K S + K +D A D ++ R +T +PP+G Sbjct: 38203 TEKPKQKSTISELKNQDTNSAVPHLDNRQHVRRTQTNVPPRG 38328 >U05314 Saccharomyces cerevisiae nuclear polyadenylated RNA-binding protein Length = 2499 Plus Strand HSPs: Score = 147 (51.7 bits), Expect = 2.3e-07, P = 2.3e-07 Identities = 38/113 (33%), Positives = 65/113 (57%), Frame = +3 Query: 117 PGLSIGDVAKKLGEMWNNTAADD----KQPYEKKAAKLKEKYEK--DIAAYRAKGKPDAA 170 P LS+ D E+ NN++ADD P E++ A+ +E+ E+ ++ + + D Sbjct: 87 PELSV-DSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKE 263 Query: 171 KKGVVKAEKSKKKKEEEE----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KG E ++EEEE D++D E+EEEEE+++D+D+++DDDDE Sbjct: 264 EKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDE 425 Score = 128 (45.1 bits), Expect = 7.0e-05, P = 7.0e-05 Identities = 35/114 (30%), Positives = 65/114 (57%), Frame = +3 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQ---PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAK 171 P LS+ + + M N++A D + P E++ A+ +E+ E+ ++ + + D + Sbjct: 87 PELSVDSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKEE 266 Query: 172 KGVVKAEKSKKKKEEEE-----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214 KG E ++EEEE D+++EE+EEEEED++D+D+++DDD+E Sbjct: 267 KGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDEE 428 Score = 115 (40.5 bits), Expect = 0.0025, P = 0.0025 Identities = 29/87 (33%), Positives = 52/87 (59%), Frame = +3 Query: 142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191 P E++ A+ +E+ E+ ++ + + D +KG E ++EEEE D++ Sbjct: 171 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 350 Query: 192 DEEDEEEEEDEEDEDEEEDDDD----E 214 D+++EEEEE+EED+D+++DDDD E Sbjct: 351 DDDNEEEEEEEEDDDDDDDDDDDDEEE 431 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042 Identities = 29/88 (32%), Positives = 52/88 (59%), Frame = +3 Query: 142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191 P E++ A+ +E+ E+ ++ + + D +KG E ++EEEE D++ Sbjct: 171 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 350 Query: 192 DEEDEEEEEDEEDEDEEEDDDD-----E 214 D+++EEEEE+EED+D+++DDDD E Sbjct: 351 DDDNEEEEEEEEDDDDDDDDDDDDEEEE 434 Score = 110 (38.7 bits), Expect = 0.0094, P = 0.0093 Identities = 21/81 (25%), Positives = 51/81 (62%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + ++++EEE+D++D Sbjct: 237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDD-----DNEEEEEEEEDDDDD 401 Query: 193 EEDEEEEEDEEDEDEEEDDDD 213 ++D++++E+EE+E+EEE +D+ Sbjct: 402 DDDDDDDEEEEEEEEEEGNDN 464 Score = 110 (38.7 bits), Expect = 0.0094, P = 0.0093 Identities = 21/81 (25%), Positives = 52/81 (64%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + +++++EEEED++D Sbjct: 237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDD------DDNEEEEEEEEDDDD 398 Query: 193 EEDEEEEEDEEDEDEEEDDDD 213 ++D++++++EE+E+EEE+ +D Sbjct: 399 DDDDDDDDEEEEEEEEEEGND 461 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035 Identities = 14/30 (46%), Positives = 30/30 (100%), Frame = +3 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEEE+EE+++D+++++D++DE+EEE++++E Sbjct: 363 EEEEEEEEDDDDDDDDDDDDEEEEEEEEEE 452 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035 Identities = 18/75 (24%), Positives = 47/75 (62%), Frame = +3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +D E++ + K + ++ + + + +KG + ++EEEE+E+D++D++ Sbjct: 228 EDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDD 407 Query: 198 EEEDEEDEDEEEDDD 212 +++D+E+E+EEE+++ Sbjct: 408 DDDDDEEEEEEEEEE 452 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046 Identities = 14/30 (46%), Positives = 29/30 (96%), Frame = +3 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + EE+EE+EED+++++D++D+DEEE++++E Sbjct: 357 DNEEEEEEEEDDDDDDDDDDDDEEEEEEEE 446 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046 Identities = 20/80 (25%), Positives = 50/80 (62%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + ++++EE++D++D Sbjct: 237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDD----NEEEEEEEEDDDDDD 404 Query: 193 EEDEEEEEDEEDEDEEEDDD 212 ++D+++EE+EE+E+EE +D+ Sbjct: 405 DDDDDDEEEEEEEEEEGNDN 464 Score = 92 (32.4 bits), Expect = 1.1, P = 0.66 Identities = 23/91 (25%), Positives = 51/91 (56%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + E+ +++ ++++D++D Sbjct: 237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDN-EEEEEEEEDDDDDDDDD 413 Query: 193 EEDEEEEEDEEDEDEE----------EDDDDE 214 ++DEEEEE+EE+E + ED +DE Sbjct: 414 DDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDE 509 Score = 87 (30.6 bits), Expect = 4.0, P = 0.98 Identities = 22/92 (23%), Positives = 48/92 (52%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEE 191 N+ +DK+ ++ ++ E++ ++ KG D + E+ + ++++D++ Sbjct: 237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 416 Query: 192 DEEDEEEEEDEEDEDE---------EEDDDDE 214 D+E+EEEEE+EE D E+ +D+E Sbjct: 417 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEE 512 Score = 84 (29.6 bits), Expect = 8.8, P = 1.0 Identities = 21/93 (22%), Positives = 50/93 (53%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + E+ ++ ++++D++D Sbjct: 237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 416 Query: 193 EEDEEEEEDEED-------------EDEEEDDD 212 +++EEEEE+EE+ ED E+++D Sbjct: 417 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEED 515 >D37935 Yeast DNA for RNA binding protein, complete cds. Length = 2643 Plus Strand HSPs: Score = 147 (51.7 bits), Expect = 2.3e-07, P = 2.3e-07 Identities = 38/113 (33%), Positives = 65/113 (57%), Frame = +1 Query: 117 PGLSIGDVAKKLGEMWNNTAADD----KQPYEKKAAKLKEKYEK--DIAAYRAKGKPDAA 170 P LS+ D E+ NN++ADD P E++ A+ +E+ E+ ++ + + D Sbjct: 214 PELSV-DSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKE 390 Query: 171 KKGVVKAEKSKKKKEEEE----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KG E ++EEEE D++D E+EEEEE+++D+D+++DDDDE Sbjct: 391 EKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDE 552 Score = 128 (45.1 bits), Expect = 7.1e-05, P = 7.1e-05 Identities = 35/114 (30%), Positives = 65/114 (57%), Frame = +1 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQ---PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAK 171 P LS+ + + M N++A D + P E++ A+ +E+ E+ ++ + + D + Sbjct: 214 PELSVDSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKEE 393 Query: 172 KGVVKAEKSKKKKEEEE-----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214 KG E ++EEEE D+++EE+EEEEED++D+D+++DDD+E Sbjct: 394 KGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDEE 555 Score = 115 (40.5 bits), Expect = 0.0025, P = 0.0025 Identities = 29/87 (33%), Positives = 52/87 (59%), Frame = +1 Query: 142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191 P E++ A+ +E+ E+ ++ + + D +KG E ++EEEE D++ Sbjct: 298 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 477 Query: 192 DEEDEEEEEDEEDEDEEEDDDD----E 214 D+++EEEEE+EED+D+++DDDD E Sbjct: 478 DDDNEEEEEEEEDDDDDDDDDDDDEEE 558 Score = 113 (39.8 bits), Expect = 0.0043, P = 0.0042 Identities = 29/88 (32%), Positives = 52/88 (59%), Frame = +1 Query: 142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191 P E++ A+ +E+ E+ ++ + + D +KG E ++EEEE D++ Sbjct: 298 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 477 Query: 192 DEEDEEEEEDEEDEDEEEDDDD-----E 214 D+++EEEEE+EED+D+++DDDD E Sbjct: 478 DDDNEEEEEEEEDDDDDDDDDDDDEEEE 561 Score = 110 (38.7 bits), Expect = 0.0095, P = 0.0094 Identities = 21/81 (25%), Positives = 51/81 (62%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + ++++EEE+D++D Sbjct: 364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDD-----DNEEEEEEEEDDDDD 528 Query: 193 EEDEEEEEDEEDEDEEEDDDD 213 ++D++++E+EE+E+EEE +D+ Sbjct: 529 DDDDDDDEEEEEEEEEEGNDN 591 Score = 110 (38.7 bits), Expect = 0.0095, P = 0.0094 Identities = 21/81 (25%), Positives = 52/81 (64%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + +++++EEEED++D Sbjct: 364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDD------DDNEEEEEEEEDDDD 525 Query: 193 EEDEEEEEDEEDEDEEEDDDD 213 ++D++++++EE+E+EEE+ +D Sbjct: 526 DDDDDDDDEEEEEEEEEEGND 588 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035 Identities = 14/30 (46%), Positives = 30/30 (100%), Frame = +1 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEEE+EE+++D+++++D++DE+EEE++++E Sbjct: 490 EEEEEEEEDDDDDDDDDDDDEEEEEEEEEE 579 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035 Identities = 18/75 (24%), Positives = 47/75 (62%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +D E++ + K + ++ + + + +KG + ++EEEE+E+D++D++ Sbjct: 355 EDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDD 534 Query: 198 EEEDEEDEDEEEDDD 212 +++D+E+E+EEE+++ Sbjct: 535 DDDDDEEEEEEEEEE 579 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046 Identities = 14/30 (46%), Positives = 29/30 (96%), Frame = +1 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + EE+EE+EED+++++D++D+DEEE++++E Sbjct: 484 DNEEEEEEEEDDDDDDDDDDDDEEEEEEEE 573 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046 Identities = 20/80 (25%), Positives = 50/80 (62%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + ++++EE++D++D Sbjct: 364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDD----NEEEEEEEEDDDDDD 531 Query: 193 EEDEEEEEDEEDEDEEEDDD 212 ++D+++EE+EE+E+EE +D+ Sbjct: 532 DDDDDDEEEEEEEEEEGNDN 591 Score = 92 (32.4 bits), Expect = 1.1, P = 0.67 Identities = 23/91 (25%), Positives = 51/91 (56%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + E+ +++ ++++D++D Sbjct: 364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDN-EEEEEEEEDDDDDDDDD 540 Query: 193 EEDEEEEEDEEDEDEE----------EDDDDE 214 ++DEEEEE+EE+E + ED +DE Sbjct: 541 DDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDE 636 Score = 87 (30.6 bits), Expect = 4.1, P = 0.98 Identities = 22/92 (23%), Positives = 48/92 (52%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEE 191 N+ +DK+ ++ ++ E++ ++ KG D + E+ + ++++D++ Sbjct: 364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 543 Query: 192 DEEDEEEEEDEEDEDE---------EEDDDDE 214 D+E+EEEEE+EE D E+ +D+E Sbjct: 544 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEE 639 Score = 84 (29.6 bits), Expect = 8.9, P = 1.0 Identities = 21/93 (22%), Positives = 50/93 (53%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 N+ +DK+ ++ ++ E++ ++ KG D + E+ ++ ++++D++D Sbjct: 364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 543 Query: 193 EEDEEEEEDEED-------------EDEEEDDD 212 +++EEEEE+EE+ ED E+++D Sbjct: 544 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEED 642 >M81784 Rattus norvegicus K+ channel mRNA, sequence. Length = 2775 Plus Strand HSPs: Score = 146 (51.4 bits), Expect = 3.4e-07, P = 3.4e-07 Identities = 25/37 (67%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K KKKKEEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 2550 KKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2660 Score = 142 (50.0 bits), Expect = 1.2e-06, P = 1.2e-06 Identities = 24/37 (64%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K KKK+EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 2553 KKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2663 Score = 134 (47.2 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 2556 KKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2672 Score = 134 (47.2 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 2559 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2675 Score = 129 (45.4 bits), Expect = 5.5e-05, P = 5.5e-05 Identities = 23/41 (56%), Positives = 36/41 (87%), Frame = +3 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 KK K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 2553 KKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2675 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021 Identities = 25/58 (43%), Positives = 38/58 (65%), Frame = +3 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----- 209 +I AY KK + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 2517 EILAYSNYFSMKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 2690 Score = 104 (36.6 bits), Expect = 0.048, P = 0.047 Identities = 24/56 (42%), Positives = 38/56 (67%), Frame = +3 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD------------E 214 KK K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++ E Sbjct: 2550 KKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKE 2717 Score = 87 (30.6 bits), Expect = 4.1, P = 0.98 Identities = 25/68 (36%), Positives = 38/68 (55%), Frame = +3 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------- 209 +I AY KK + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 2517 EILAYSNYFSMKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 2696 Query: 210 -------- 209 Sbjct: 2697 KKKKKKEK 2720 Score = 85 (29.9 bits), Expect = 6.8, P = 1.0 Identities = 25/69 (36%), Positives = 38/69 (55%), Frame = +3 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------- 209 +I AY KK + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 2517 EILAYSNYFSMKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 2696 Query: 210 --------- 209 Sbjct: 2697 KKKKKKEKK 2723 >A12522 Ag169 clone Length = 843 Minus Strand HSPs: Score = 143 (50.3 bits), Expect = 3.5e-07, P = 3.5e-07 Identities = 36/99 (36%), Positives = 61/99 (61%), Frame = -1 Query: 111 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE-KYEKDIAAYRAKGKPDA 169 K K E LSI + + +G + + ++KK AK++E + +K + + K + Sbjct: 288 KSKVEEKNLSIQE--QLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEE 115 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 +K+ V+ E + +++EEE EEDEE+EEEEE+EE+E+EEE Sbjct: 114 SKE--VQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEE 1 Score = 140 (49.3 bits), Expect = 9.2e-07, P = 9.2e-07 Identities = 62/205 (30%), Positives = 101/205 (49%), Frame = -1 Query: 25 EHKK-KHPDASVNFSEFSKK--CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPK 81 EHK+ +H + E K+ S+ K+ K+KGK +D K KA+ E+ K + Sbjct: 615 EHKEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGK-KDKGKHKKAKKEKVKKHVVKNV 439 Query: 82 GETKKK-------FKDPNA--------PKRP---PSAFFLFCSEY---RPKIKGEHPGLS 120 E + K +D A RP P + E K K E LS Sbjct: 438 IEDEDKDGVEIINLEDKEACEEQHITVESRPLSQPQCKLIDEPEQLTLMDKSKVEEKNLS 259 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE-KYEKDIAAYRAKGKPDAAKKGVVKAEK 179 I + + +G + + ++KK AK++E + +K + + K + +K E Sbjct: 258 IQE--QLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEESK------EV 103 Query: 180 SKKKKEEEEDEED-EEDEEEEEDEEDEDEEEDDD 212 ++ KE +EDEE+ EEDEEEEE+EE+E+EEE+++ Sbjct: 102 QEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEE 1 Score = 127 (44.7 bits), Expect = 4.4e-05, P = 4.4e-05 Identities = 62/203 (30%), Positives = 100/203 (49%), Frame = -1 Query: 25 EHKK-KHPDASVNFSEFSKK--CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPK 81 EHK+ +H + E K+ S+ K+ K+KGK +D K KA+ E+ K + Sbjct: 615 EHKEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGK-KDKGKHKKAKKEKVKKHVVKNV 439 Query: 82 GETKKK-------FKDPNA--------PKRP---PSAFFLFCSEY---RPKIKGEHPGLS 120 E + K +D A RP P + E K K E LS Sbjct: 438 IEDEDKDGVEIINLEDKEACEEQHITVESRPLSQPQCKLIDEPEQLTLMDKSKVEEKNLS 259 Query: 121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180 I + + +G + + ++KK AK++E A K K K K E+S Sbjct: 258 IQE--QLIGTIGRVNVVPRRDNHKKKMAKIEE-------AELQKQKH--VDKEEDKKEES 112 Query: 181 KKKKEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214 K+ +EE ++ +EDEE+ EE+E+EE+E+EEE++++E Sbjct: 111 KEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEE 7 >X76589 H.sapiens DNA 3' flanking simple sequence region clone wg2c3. Length = 236 Plus Strand HSPs: Score = 132 (46.5 bits), Expect = 3.7e-07, P = 3.7e-07 Identities = 30/51 (58%), Positives = 41/51 (80%), Frame = +1 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE-EEEEDEEDEDEEEDDDDE 214 KGK +A K G KAEK +++KEEEE+EE+EE+ EEEE EE+E EEE++ +E Sbjct: 13 KGKXEA-KAGA-KAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEE 162 Score = 118 (41.5 bits), Expect = 1.8e-05, P = 1.8e-05 Identities = 24/70 (34%), Positives = 43/70 (61%), Frame = +1 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 K AK K EK+ + + + ++ + E +++ EEEE+ E+EE+ EEEE+ E+ Sbjct: 19 KXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEEEEEAEEEEEAEE 198 Query: 205 EDEEEDDDDE 214 E+EEE+++ E Sbjct: 199 EEEEEEEEAE 228 Score = 116 (40.8 bits), Expect = 3.0e-05, P = 3.0e-05 Identities = 24/48 (50%), Positives = 36/48 (75%), Frame = +1 Query: 168 DAAKKGVVKAEK-SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D + KG +A+ +K +KEEEE EE+EE+EEEEE E+E+ EE++ +E Sbjct: 1 DLSVKGKXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEE 144 Score = 116 (40.8 bits), Expect = 3.0e-05, P = 3.0e-05 Identities = 26/72 (36%), Positives = 48/72 (66%), Frame = +1 Query: 140 KQPYEKKA-AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 K E KA AK +++ E+ + + +AA++ + E++++++E EE+EE EE+EE Sbjct: 13 KGKXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEEEEEAEEEEEA 192 Query: 199 EEDEEDEDEEED 210 EE+EE+E+EE + Sbjct: 193 EEEEEEEEEEAE 228 Score = 115 (40.5 bits), Expect = 3.9e-05, P = 3.9e-05 Identities = 26/71 (36%), Positives = 44/71 (61%), Frame = +1 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED-EEDEEDEEEEEDEE 203 K AK K EK+ + + + ++ + E +++ EEEE+ EE+EE EEEEE EE Sbjct: 19 KXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEEEEEAEEEEEAEE 198 Query: 204 DEDEEEDDDDE 214 +E+EEE++ ++ Sbjct: 199 EEEEEEEEAEK 231 Score = 106 (37.3 bits), Expect = 0.00043, P = 0.00043 Identities = 25/64 (39%), Positives = 43/64 (67%), Frame = +1 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 +K + KE+ E++ A + +A ++ +AE+ ++ +EEEE EE+EE EEEEE+EE+ Sbjct: 49 EKEEEEKEEEEEEEEEEEAAEEEEAEEE---EAEEEEEAEEEEEAEEEEEAEEEEEEEEE 219 Query: 205 EDEE 208 E E+ Sbjct: 220 EAEK 231 >E10125 DNA encoding an immunogenicity protein. Length = 2069 Plus Strand HSPs: Score = 145 (51.0 bits), Expect = 4.2e-07, P = 4.2e-07 Identities = 30/77 (38%), Positives = 52/77 (67%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E+K E+ EK K + +K + + E+ ++ +EEEE+EE+EE+EE Sbjct: 1441 EEEEEEEEKVTH--EEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEE 1614 Query: 198 EEEDEEDEDEEEDDDDE 214 EEEDEE+E+EEE+D++E Sbjct: 1615 EEEDEEEEEEEEEDEEE 1665 Score = 143 (50.3 bits), Expect = 8.2e-07, P = 8.2e-07 Identities = 28/77 (36%), Positives = 53/77 (68%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ E+ EK I K + + ++ + E+ +++++EEE+EE+EEDEE Sbjct: 1483 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 1662 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++ E Sbjct: 1663 EEEEEENEEEEEEENKE 1713 Score = 140 (49.3 bits), Expect = 2.1e-06, P = 2.1e-06 Identities = 30/72 (41%), Positives = 47/72 (65%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGK-PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 E+K +E+ E++ + + K ++ V E+ K EEEE EEDEE+EEEEE+E Sbjct: 1423 EEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEE 1602 Query: 203 EDEDEEEDDDDE 214 E+E+EEED+++E Sbjct: 1603 EEEEEEEDEEEE 1638 Score = 119 (41.9 bits), Expect = 0.00079, P = 0.00079 Identities = 25/77 (32%), Positives = 46/77 (59%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ E+ E++ + + + K +++K E+EE EEDEE Sbjct: 1399 EEKVTHEEEEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEE 1578 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++DE Sbjct: 1579 EEEEEEEEEEEEEEEDE 1629 Score = 116 (40.8 bits), Expect = 0.0018, P = 0.0018 Identities = 28/89 (31%), Positives = 54/89 (60%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ E+ EK I K + + ++ + E+ +++++EEE+EE+EEDEE Sbjct: 1483 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 1662 Query: 198 EEEDEEDEDEEEDD------------DDE 214 EEE+EE+E+EEE++ ++E Sbjct: 1663 EEEEEENEEEEEEENKEEEEEEKEEHEEE 1749 Score = 115 (40.5 bits), Expect = 0.0024, P = 0.0024 Identities = 23/81 (28%), Positives = 54/81 (66%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ + E+ EK+ + + + ++ + E+ ++++EE+E+EE+EE+ E Sbjct: 1507 EEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENE 1686 Query: 198 EEEDEEDEDEEEDD----DDE 214 EEE+EE+++EEE++ ++E Sbjct: 1687 EEEEEENKEEEEEEKEEHEEE 1749 Score = 103 (36.3 bits), Expect = 0.058, P = 0.056 Identities = 21/74 (28%), Positives = 50/74 (67%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E++ + +E+ E++ + + D ++ + ++ ++++EE E+EE+EE++EEEE+E+ Sbjct: 1552 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 1731 Query: 204 DEDEEE---DDDDE 214 +E EEE ++++E Sbjct: 1732 EEHEEEVTHEEEEE 1773 Score = 97 (34.1 bits), Expect = 0.28, P = 0.25 Identities = 20/75 (26%), Positives = 50/75 (66%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E++ + +E+ E++ + + D ++ + ++ ++++EE E+EE+EE++EEEE+E+ Sbjct: 1552 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 1731 Query: 204 DEDEEE----DDDDE 214 +E EEE +++++ Sbjct: 1732 EEHEEEVTHEEEEEK 1776 Score = 93 (32.7 bits), Expect = 0.80, P = 0.55 Identities = 22/77 (28%), Positives = 45/77 (58%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +D++ E++ + +E+ E+D + + + ++ E+ +++ +EEE+EE EE EE Sbjct: 1567 EDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEKEEHEE 1746 Query: 198 E---EEDEEDEDEEEDD 211 E EE+EE EE++ Sbjct: 1747 EVTHEEEEEKVTHEEEE 1797 Score = 90 (31.7 bits), Expect = 1.8, P = 0.83 Identities = 20/72 (27%), Positives = 41/72 (56%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ ++ + EK+ + + K ++ V E+ +K EEE+EE+E+ Sbjct: 1297 EEKVTHEEEKEEVTHEEEKEEVTHEEEEKVTHEEEEKVTHEEEEKVTYEEEEEEEEKVTH 1476 Query: 198 EEEDEEDEDEEE 209 EEE++ +EEE Sbjct: 1477 EEEEKVTHEEEE 1512 >M10296 Mouse DNA with homology to EBV IR3 repeat, segment 1, clone Mu2. Length = 460 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 4.4e-07, P = 4.4e-07 Identities = 26/92 (28%), Positives = 56/92 (60%), Frame = +3 Query: 123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 D K+ G+ +++ EKK + +EK ++ + + + ++G + E+ ++ Sbjct: 21 DKQKEEGKEEEEEEKEEEGEEEKKEEEEEEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEE 200 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++E+EE EE+EE E+EEE+E++E EE++ ++E Sbjct: 201 EQEQEEQEEEEEQEQEEEEEQEEQEEQEQEEE 296 Score = 128 (45.1 bits), Expect = 5.8e-07, P = 5.8e-07 Identities = 25/76 (32%), Positives = 51/76 (67%), Frame = +3 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +++ EK+ K +E+ E++ +G+ + ++ + E+ ++++EEEE++E EE+EE+ Sbjct: 93 EEEEEEKEKEKEEEEGEEEEEEQEEEGEQEQEQE---EEEQEQEEQEEEEEQEQEEEEEQ 263 Query: 199 EEDEEDEDEEEDDDDE 214 EE EE E EEE++ +E Sbjct: 264 EEQEEQEQEEEEEQEE 311 Score = 128 (45.1 bits), Expect = 5.8e-07, P = 5.8e-07 Identities = 29/108 (26%), Positives = 63/108 (58%), Frame = +3 Query: 107 EYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166 E + K K E G + ++ GE ++++ E++ + +E+ E++ + + + Sbjct: 105 EEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEEEQEQEEQEEEEEQEQEEEEEQEEQEEQE 284 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + ++ + E+ ++++EEE++EE EE EEEE++EE E EEE+ ++E Sbjct: 285 QEEEEEQE-EQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEEEEQEEE 425 Score = 122 (42.9 bits), Expect = 3.0e-06, P = 3.0e-06 Identities = 27/110 (24%), Positives = 65/110 (59%), Frame = +3 Query: 107 EYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166 E + K K E G + ++ GE ++++ E++ + +E+ E++ + + + Sbjct: 105 EEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEEEQEQEEQEEEEEQEQEEEEEQEEQEEQE 284 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDE--EDEEDEEEEEDEEDEDEEEDDDDE 214 + ++ + E+ ++++EE+E+E E EE+E+EEE E++E+E+E++ +E Sbjct: 285 QEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEEEEQEEEGEE 434 Score = 119 (41.9 bits), Expect = 6.8e-06, P = 6.8e-06 Identities = 28/112 (25%), Positives = 64/112 (57%), Frame = +3 Query: 107 EYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166 E + K K E G + ++ GE ++++ E++ + +E+ E++ + + + Sbjct: 105 EEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEEEQEQEEQEEEEEQEQEEEEEQEEQEEQE 284 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDE----EDEEDEEEEEDEEDEDEEEDDDDE 214 + ++ + E+ ++++EE+E+E E+EE EEE+E EE+E EEE ++++ Sbjct: 285 QEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEEEEQEEEGEEEQ 440 Score = 110 (38.7 bits), Expect = 0.00015, P = 0.00015 Identities = 20/77 (25%), Positives = 49/77 (63%), Frame = +3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +++Q E++ + +++ ++ + + + ++ + E+ +++EEEE EE++E EE Sbjct: 228 EEEQEQEEEEEQEEQEEQEQEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEE 407 Query: 198 EEEDEEDEDEEEDDDDE 214 EE++EE E+E+E + +E Sbjct: 408 EEQEEEGEEEQEQEQEE 458 Score = 108 (38.0 bits), Expect = 0.00064, P = 0.00064 Identities = 19/44 (43%), Positives = 35/44 (79%), Frame = +3 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++G + E+ K+++ EEE +E+EE+E+E+E EE+E EEE+++ E Sbjct: 33 EEGKEEEEEEKEEEGEEEKKEEEEEEKEKEKEEEEGEEEEEEQE 164 Score = 108 (38.0 bits), Expect = 0.00064, P = 0.00064 Identities = 19/77 (24%), Positives = 49/77 (63%), Frame = +3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E+ + + ++ + E+ ++ +E+EE+E++EE E+ Sbjct: 222 EEEEEQEQEEEEEQEEQEEQEQEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQ 401 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE++E+E EEE + ++ Sbjct: 402 EEEEQEEEGEEEQEQEQ 452 Score = 106 (37.3 bits), Expect = 0.0017, P = 0.0017 Identities = 18/44 (40%), Positives = 35/44 (79%), Frame = +3 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K + +K + K+EEEE++E+E +EE++E+EE+E E+E +++E Sbjct: 6 RKPCLDKQKEEGKEEEEEEKEEEGEEEKKEEEEEEKEKEKEEEE 137 >AL009197 S.pombe chromosome I cosmid c10F6. Length = 38,139 Minus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 54/186 (29%), Positives = 92/186 (49%), Frame = -3 Query: 36 NFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTY-IP-P-----KGETK 85 N SE S K S + A FE + +++ E+ T IP P K E+ Sbjct: 17092 NTSEISHKSSNNSQPKDASVNDTDADFEQQNQVVQSKDEKITNTDPIPSPIITNLKTESS 16913 Query: 86 K----KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK-LGEMWNNTAADDK 140 K K NA F F S +PK+K E L G KK L + WNN ++K Sbjct: 16912 KSSGAKKATSNAKITDTMLFNHFSSIQKPKLKAEGSTLK-GQALKKTLEDTWNNLTEEEK 16736 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 200 +PY + +EK + A R + ++AK ++ EK+K+K+++++ E+D ++ + Sbjct: 16735 KPYHEGLLAAREKARE---ARRRRSAQNSAK---LEKEKAKEKQKDKDQEQDTVSDKNQI 16574 Query: 201 DEEDEDEEEDDDD 213 DE ++ ++E D++ Sbjct: 16573 DEIEKGQKEVDEE 16535 Score = 140 (49.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07 Identities = 36/122 (29%), Positives = 67/122 (54%), Frame = -3 Query: 92 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK-LGEMWNNTAADDKQPYEKKAAKL 150 NA F F S +PK+K E L G KK L + WNN ++K+PY + Sbjct: 16882 NAKITDTMLFNHFSSIQKPKLKAEGSTLK-GQALKKTLEDTWNNLTEEEKKPYHEGLLAA 16706 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +EK + A R + ++AK ++ EK+K+K+++++ E+D ++ + DE ++ ++E Sbjct: 16705 REKARE---ARRRRSAQNSAK---LEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEV 16544 Query: 211 DDD 213 D++ Sbjct: 16543 DEE 16535 Score = 56 (19.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07 Identities = 15/47 (31%), Positives = 27/47 (57%), Frame = -2 Query: 29 KHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 KH + ++ +S+ KCS+ KT S K K +D DK + ++++K Sbjct: 36632 KHWN*TMPYSQNRDKCSDNKKT-SEPYK-KLQDRTTVDKGK*KKDLK 36498 Score = 42 (14.8 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07 Identities = 7/23 (30%), Positives = 14/23 (60%), Frame = -1 Query: 73 EMKTYIPPKGETKKKFKDPNAPK 95 ++ TY P + +K+ +PN P+ Sbjct: 21675 KIDTYTP*RRHATRKYFNPNQPQ 21607 >Z50100 H.vulgare GAA-satellite DNA Length = 334 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 50 EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 160 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 53 EEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 163 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 56 EEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 166 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 59 EEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 169 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 62 EEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 172 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 65 EQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 175 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 71 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 181 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 74 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 184 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 77 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 187 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 80 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 190 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 83 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 193 Score = 127 (44.7 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 68 QEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 178 Score = 125 (44.0 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 23/76 (30%), Positives = 54/76 (71%), Frame = +2 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EEE Sbjct: 2 EEEEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 181 Query: 199 EEDEEDEDEEEDDDDE 214 EE+E +E+EEE++++E Sbjct: 182 EEEE*EEEEEEEEEEE 229 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++ E Sbjct: 89 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*E 199 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++ +E Sbjct: 92 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EE 202 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE +++E Sbjct: 98 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEE 208 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E EEE++++E Sbjct: 110 EEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEE 220 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE E+EEE++++E Sbjct: 116 EEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEE 226 Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ + ++EEEE EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 35 EEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEE 145 Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EE+E+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 41 EE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEE 151 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ +++ EEEE+E++EE+EEEEE+EE+E+EEE++++E Sbjct: 29 EEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEE 139 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++ +EEEE++E+EE+EEEEE+EE+E+EEE++++E Sbjct: 32 EEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEE 142 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ +++EEE++EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 38 EEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEE 148 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E ++++E+EE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 44 E*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEE 154 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE EE+EEE+E+EE+E+EEE++++E Sbjct: 5 EEEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEE 115 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE EE+EE++EEEE+EE+E+EEE++++E Sbjct: 14 EEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEE 124 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE ++++E Sbjct: 101 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEE 211 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+E E++++E Sbjct: 104 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEE 214 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+ +EEE++++E Sbjct: 113 EEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEE 223 Score = 119 (41.9 bits), Expect = 9.3e-06, P = 9.3e-06 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEE +EE+EE EEEEE+EE+E+EEE++++E Sbjct: 17 EEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEE 127 Score = 119 (41.9 bits), Expect = 9.3e-06, P = 9.3e-06 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++ EEE+EE EE+EEEEE+EE+E+EEE++++E Sbjct: 26 EEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEE 136 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+ E+EEEE++EE+E+EEE++++E Sbjct: 2 EEEEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEE 112 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+E +EE+EE+EE+EE+E+EEE++++E Sbjct: 8 EEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEE 118 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+ E+EE+E+EEE+EE+E+EEE++++E Sbjct: 11 EEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEE 121 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EE E+EE+E++EEEEE+EE+E+EEE++++E Sbjct: 20 EEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEE 130 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE EE+E+EEE+++ E Sbjct: 125 EEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEEE*E 235 Score = 115 (40.5 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 23/77 (29%), Positives = 53/77 (68%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE EE+EE Sbjct: 32 EEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEE 211 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE E+E E++++E Sbjct: 212 EEEEEE*EEE*EEEEEE 262 Score = 112 (39.4 bits), Expect = 6.1e-05, P = 6.1e-05 Identities = 24/79 (30%), Positives = 54/79 (68%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED-- 195 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+ Sbjct: 20 EEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*E 199 Query: 196 EEEEEDEEDEDEEEDDDDE 214 EEEEE+EE+E EEE +++E Sbjct: 200 EEEEEEEEEE*EEE*EEEE 256 Score = 111 (39.1 bits), Expect = 7.9e-05, P = 7.9e-05 Identities = 21/76 (27%), Positives = 53/76 (69%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++ EEE EE+EE+EE Sbjct: 89 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEEE*EEE*EEEEEEEE 268 Query: 198 EEEDEEDEDEEEDDDD 213 EEE+EE+E+E+E++++ Sbjct: 269 EEEEEEEEEEKEEEEE 316 Score = 109 (38.4 bits), Expect = 0.00014, P = 0.00014 Identities = 22/74 (29%), Positives = 51/74 (68%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ +++EEEE+EE+EE+EE Sbjct: 113 EEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEEE*EEE*EEEEEEEEEEEEEEEE 292 Query: 198 EEEDEEDEDEEEDD 211 EE++EE+E EEE++ Sbjct: 293 EEKEEEEEVEEEEE 334 >L16900 Yeast intrastrand crosslink recognition protein (Ixr1) gene, Length = 3036 Plus Strand HSPs: Score = 145 (51.0 bits), Expect = 4.8e-07, P = 4.8e-07 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y F + R E ++ P+A V E SK S RWK ++ +K F + Sbjct: 2037 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 2201 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + + +Y Y +K P PKRP F F E RP + E+P + Sbjct: 2202 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 2348 Query: 122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152 ++ K +GE W K Y E +LKE Sbjct: 2349 IEITKIIGERWRELDPAKKAEYTETYKKRLKE 2444 Score = 106 (37.3 bits), Expect = 0.028, P = 0.028 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = +3 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E +K+ K PKRP SA+FLF R ++ + P + +++K W D K+P Sbjct: 2016 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 2192 Query: 143 -YEK------KAAKLKEKYEKDIAAYRAKG 165 YE+ K +++ YEK + R G Sbjct: 2193 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 2282 >I66612 Sequence 12 from patent US 5670621. Length = 3292 Plus Strand HSPs: Score = 145 (51.0 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = +1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y F + R E ++ P+A V E SK S RWK ++ +K F + Sbjct: 907 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 1071 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + + +Y Y +K P PKRP F F E RP + E+P + Sbjct: 1072 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 1218 Query: 122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152 ++ K +GE W K Y E +LKE Sbjct: 1219 IEITKIIGERWRELDPCQKAEYTETYKKRLKE 1314 Score = 106 (37.3 bits), Expect = 0.029, P = 0.028 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = +1 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E +K+ K PKRP SA+FLF R ++ + P + +++K W D K+P Sbjct: 886 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 1062 Query: 143 -YEK------KAAKLKEKYEKDIAAYRAKG 165 YE+ K +++ YEK + R G Sbjct: 1063 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 1152 >E10126 DNA encoding an immunogenicity protein of Leucocytozon caulleryi Length = 3399 Plus Strand HSPs: Score = 145 (51.0 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 30/77 (38%), Positives = 52/77 (67%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E+K E+ EK K + +K + + E+ ++ +EEEE+EE+EE+EE Sbjct: 2590 EEEEEEEEKVTH--EEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEE 2763 Query: 198 EEEDEEDEDEEEDDDDE 214 EEEDEE+E+EEE+D++E Sbjct: 2764 EEEDEEEEEEEEEDEEE 2814 Score = 143 (50.3 bits), Expect = 9.4e-07, P = 9.4e-07 Identities = 28/77 (36%), Positives = 53/77 (68%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ E+ EK I K + + ++ + E+ +++++EEE+EE+EEDEE Sbjct: 2632 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 2811 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++ E Sbjct: 2812 EEEEEENEEEEEEENKE 2862 Score = 140 (49.3 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 30/72 (41%), Positives = 47/72 (65%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGK-PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 E+K +E+ E++ + + K ++ V E+ K EEEE EEDEE+EEEEE+E Sbjct: 2572 EEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEE 2751 Query: 203 EDEDEEEDDDDE 214 E+E+EEED+++E Sbjct: 2752 EEEEEEEDEEEE 2787 Score = 119 (41.9 bits), Expect = 0.00089, P = 0.00089 Identities = 25/77 (32%), Positives = 46/77 (59%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ E+ E++ + + + K +++K E+EE EEDEE Sbjct: 2548 EEKVTHEEEEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEE 2727 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++DE Sbjct: 2728 EEEEEEEEEEEEEEEDE 2778 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020 Identities = 28/89 (31%), Positives = 54/89 (60%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ E+ EK I K + + ++ + E+ +++++EEE+EE+EEDEE Sbjct: 2632 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 2811 Query: 198 EEEDEEDEDEEEDD------------DDE 214 EEE+EE+E+EEE++ ++E Sbjct: 2812 EEEEEENEEEEEEENKEEEEEEKEEHEEE 2898 Score = 115 (40.5 bits), Expect = 0.0026, P = 0.0026 Identities = 23/81 (28%), Positives = 54/81 (66%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ + E+ EK+ + + + ++ + E+ ++++EE+E+EE+EE+ E Sbjct: 2656 EEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENE 2835 Query: 198 EEEDEEDEDEEEDD----DDE 214 EEE+EE+++EEE++ ++E Sbjct: 2836 EEEEEENKEEEEEEKEEHEEE 2898 Score = 103 (36.3 bits), Expect = 0.064, P = 0.062 Identities = 21/74 (28%), Positives = 50/74 (67%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E++ + +E+ E++ + + D ++ + ++ ++++EE E+EE+EE++EEEE+E+ Sbjct: 2701 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 2880 Query: 204 DEDEEE---DDDDE 214 +E EEE ++++E Sbjct: 2881 EEHEEEVTHEEEEE 2922 Score = 97 (34.1 bits), Expect = 0.31, P = 0.27 Identities = 20/75 (26%), Positives = 50/75 (66%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E++ + +E+ E++ + + D ++ + ++ ++++EE E+EE+EE++EEEE+E+ Sbjct: 2701 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 2880 Query: 204 DEDEEE----DDDDE 214 +E EEE +++++ Sbjct: 2881 EEHEEEVTHEEEEEK 2925 Score = 93 (32.7 bits), Expect = 0.87, P = 0.58 Identities = 22/77 (28%), Positives = 45/77 (58%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +D++ E++ + +E+ E+D + + + ++ E+ +++ +EEE+EE EE EE Sbjct: 2716 EDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEKEEHEE 2895 Query: 198 E---EEDEEDEDEEEDD 211 E EE+EE EE++ Sbjct: 2896 EVTHEEEEEKVTHEEEE 2946 Score = 90 (31.7 bits), Expect = 1.9, P = 0.86 Identities = 20/72 (27%), Positives = 41/72 (56%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K +E++ ++ + EK+ + + K ++ V E+ +K EEE+EE+E+ Sbjct: 2446 EEKVTHEEEKEEVTHEEEKEEVTHEEEEKVTHEEEEKVTHEEEEKVTYEEEEEEEEKVTH 2625 Query: 198 EEEDEEDEDEEE 209 EEE++ +EEE Sbjct: 2626 EEEEKVTHEEEE 2661 >Z28032;Y13137 S.cerevisiae chromosome XI reading frame ORF YKL032c Length = 3499 Minus Strand HSPs: Score = 145 (51.0 bits), Expect = 4.9e-07, P = 4.9e-07 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = -1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y F + R E ++ P+A V E SK S RWK ++ +K F + Sbjct: 2215 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 2051 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + + +Y Y +K P PKRP F F E RP + E+P + Sbjct: 2050 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 1904 Query: 122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152 ++ K +GE W K Y E +LKE Sbjct: 1903 IEITKIIGERWRELDPAKKAEYTETYKKRLKE 1808 Score = 106 (37.3 bits), Expect = 0.029, P = 0.029 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = -1 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E +K+ K PKRP SA+FLF R ++ + P + +++K W D K+P Sbjct: 2236 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 2060 Query: 143 -YEK------KAAKLKEKYEKDIAAYRAKG 165 YE+ K +++ YEK + R G Sbjct: 2059 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 1970 >U53154 Caenorhabditis elegans cosmid C33G8. Length = 39,103 Plus Strand HSPs: Score = 144 (50.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07 Identities = 47/197 (23%), Positives = 89/197 (45%), Frame = +3 Query: 18 FVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 77 F + +++ KKK D + KK E+ ++K K + K D E+E Sbjct: 31398 FQKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKK 31577 Query: 78 IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAA 137 K + +D N K+ + K E+ D KK + + Sbjct: 31578 KKDKKKDDDDDEDENDKKKDKK------KKKDDKDDDENEDDKKKDKKKKKDDKEKDDDD 31739 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ +KK K + E+D + K K D + +K KKKK++++D+EDEE E+ Sbjct: 31740 EEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEK 31919 Query: 198 EEEDEEDEDEEEDDDDE 214 +++ ++ + +++DDDDE Sbjct: 31920 DKKKKDKKKDDDDDDDE 31970 Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06 Identities = 28/89 (31%), Positives = 55/89 (61%), Frame = +3 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KK + N+ +DK+ +KK + ++D K K D + EK KKKK+ Sbjct: 31758 KKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDKKKKD 31937 Query: 186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +++D++D++DE+E++D++ +D+++DD+DE Sbjct: 31938 KKKDDDDDDDEKEKKDKKKKDDKDDDEDE 32024 Score = 134 (47.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05 Identities = 51/191 (26%), Positives = 92/191 (48%), Frame = +3 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKT-YIPPKG 82 EE KKK + ++ +K E+ K K+K +D + DK + +++ K + Sbjct: 31503 EEDKKKDKKKKKDDNDEEEK--EKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDEN 31676 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E KK KD K+ E + K K + + KK + DD+ Sbjct: 31677 EDDKK-KDKKK-KKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDE 31850 Query: 143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202 KK K K+K +KD + + +K K +K KKK ++++D+E E+ +++++D+ Sbjct: 31851 DNKKKDKKKKKDDKD-------DEDEEKEKD--KKKKDKKKDDDDDDDEKEKKDKKKKDD 32003 Query: 203 EDEDEEEDDDDE 214 +D+DE+ED DD+ Sbjct: 32004 KDDDEDEDKDDK 32039 Score = 117 (41.2 bits), Expect = 0.0026, Sum P(2) = 0.0025 Identities = 53/193 (27%), Positives = 91/193 (47%), Frame = +3 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKT-YIPPKG 82 EE KKK + ++ +K E+ K K+K +D + DK + +++ K + Sbjct: 31503 EEDKKKDKKKKKDDNDEEEK--EKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDEN 31676 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E KK KD K+ E + K K + + KK + DD+ Sbjct: 31677 EDDKK-KDKKK-KKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDE 31850 Query: 143 YEKKAAKLKEKYEKDIA-AYRAKGKPDAAKK------GVVKAEKSKKKKEEEEDEEDEE- 194 KK K K+K +KD + K K KK K +K KKKK++++D+EDE+ Sbjct: 31851 DNKKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDK 32030 Query: 195 -DEEEEEDEEDEDEEED 210 D+++++D+ D+D ++D Sbjct: 32031 DDKKKKKDDVDDDMKKD 32081 Score = 104 (36.6 bits), Expect = 0.089, Sum P(2) = 0.085 Identities = 52/189 (27%), Positives = 90/189 (47%), Frame = +3 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKE----KGKFEDMAKADKARYEREMKTYI 78 +++ KKK D E KK ++ K E K K + K DK E E Sbjct: 31515 KKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENE----- 31679 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138 K + KKK KD ++ + + K K + KK + ++ D Sbjct: 31680 DDKKKDKKKKKDDK--EKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDED 31853 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV----VKAEKSKKKKEEEEDEEDEE 194 +K+ +KK K +K ++D + K K D K K +K KKKK++++D+EDE+ Sbjct: 31854 NKKKDKKK--KKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDED 32027 Query: 195 --DEEEEEDEEDEDEEED 210 D+++++D+ D+D ++D Sbjct: 32028 KDDKKKKKDDVDDDMKKD 32081 Score = 100 (35.2 bits), Expect = 1.6, Sum P(2) = 0.79 Identities = 24/73 (32%), Positives = 43/73 (58%), Frame = +3 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEE 197 K +KK K E EK+ + K D K +K KKKK++++D+EDE+ D++ Sbjct: 31863 KDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDDKK 32042 Query: 198 EEEDEEDEDEEED 210 +++D+ D+D ++D Sbjct: 32043 KKKDDVDDDMKKD 32081 Score = 89 (31.3 bits), Expect = 2.8, P = 0.94 Identities = 13/37 (35%), Positives = 31/37 (83%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 K +K KK+E+E+EE+++D+++++ ++++D EE++D Sbjct: 28093 KNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEED 28203 Score = 88 (31.0 bits), Expect = 3.6, P = 0.97 Identities = 24/67 (35%), Positives = 39/67 (58%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 EKK K K ++D + + D KK K +K KK K+ EE+E+ ++D++++ D Sbjct: 28087 EKKNKKKGNKKDED-----EEEEEDKDKK---KKDK-KKNKDSEEEEDKKKDKKKKNDSS 28239 Query: 204 DEDEEED 210 DE EEE+ Sbjct: 28240 DESEEEN 28260 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99 Identities = 13/37 (35%), Positives = 29/37 (78%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EK KKK ++DE++EE+E++++ ++D+ + +D ++E Sbjct: 28087 EKKNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEE 28197 Score = 49 (17.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07 Identities = 7/15 (46%), Positives = 14/15 (93%), Frame = +1 Query: 197 EEEEDEEDEDEEEDD 211 +E++D+EDED+++ D Sbjct: 32251 QEDDDKEDEDDKKKD 32295 Score = 43 (15.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06 Identities = 6/11 (54%), Positives = 11/11 (100%), Frame = +1 Query: 202 EEDEDEEEDDD 212 +ED+D+E++DD Sbjct: 32251 QEDDDKEDEDD 32283 Score = 43 (15.1 bits), Expect = 2.5, Sum P(3) = 0.92 Identities = 16/61 (26%), Positives = 26/61 (42%), Frame = +2 Query: 15 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 74 Y FF+Q H + +K S+ + S+++K K + M DK + E E Sbjct: 30554 YGFFLQGRHGHHGRHGMGRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMR--DKKKQEEED 30727 Query: 75 K 75 K Sbjct: 30728 K 30730 Score = 41 (14.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06 Identities = 5/12 (41%), Positives = 12/12 (100%), Frame = +1 Query: 203 EDEDEEEDDDDE 214 +++D++ED+DD+ Sbjct: 32251 QEDDDKEDEDDK 32286 >X71622 S.cerevisiae DNA sequence for Kazal serine protease inhibitor signature Length = 11,719 Minus Strand HSPs: Score = 145 (51.0 bits), Expect = 5.6e-07, P = 5.6e-07 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = -1 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 K PK+P S+Y F + R E ++ P+A V E SK S RWK ++ +K F + Sbjct: 9469 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 9305 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121 + + +Y Y +K P PKRP F F E RP + E+P + Sbjct: 9304 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 9158 Query: 122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152 ++ K +GE W K Y E +LKE Sbjct: 9157 IEITKIIGERWRELDPAKKAEYTETYKKRLKE 9062 Score = 106 (37.3 bits), Expect = 0.032, P = 0.031 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = -1 Query: 83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142 E +K+ K PKRP SA+FLF R ++ + P + +++K W D K+P Sbjct: 9490 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 9314 Query: 143 -YEK------KAAKLKEKYEKDIAAYRAKG 165 YE+ K +++ YEK + R G Sbjct: 9313 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 9224 >M15825 Chinese hamster nucleolin (C23) mRNA. Length = 2229 Plus Strand HSPs: Score = 144 (50.7 bits), Expect = 5.9e-07, P = 5.9e-07 Identities = 38/103 (36%), Positives = 60/103 (58%), Frame = +1 Query: 110 PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPD 168 P +KG+ G VA + +D++ E+ + + E++ AKGK Sbjct: 409 PVVKGKQ-----GKVAAAAPASEDEDEEEDEEEEEEDEEEEDDSEEEEAMEITPAKGKKA 573 Query: 169 AAKKGVVKAEKSKKKKE--EEEDEEDEEDEEEEEDEEDEDEEEDDD 212 AK VKA+ ++ + EEEDE++EEDEEEEEDEE+E+EEE+++ Sbjct: 574 PAKVVPVKAKNVAEEDDDDEEEDEDEEEDEEEEEDEEEEEEEEEEE 711 Score = 116 (40.8 bits), Expect = 0.0018, P = 0.0018 Identities = 20/46 (43%), Positives = 34/46 (73%), Frame = +1 Query: 171 KKGVVKAEKSKK--KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKG V K K K ++ED +++ED++++ED+ DEDEE++++DE Sbjct: 262 KKGAVTPAKGAKNGKNAKKEDSDEDEDDDDDEDDSDEDEEDEEEDE 399 Score = 113 (39.8 bits), Expect = 0.0041, P = 0.0041 Identities = 21/46 (45%), Positives = 33/46 (71%), Frame = +1 Query: 171 KKGVVKAEKSKK-----KKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 KKG V K K KKE+ +++ED++D+E++ DE++EDEEED+ Sbjct: 262 KKGAVTPAKGAKNGKNAKKEDSDEDEDDDDDEDDSDEDEEDEEEDE 399 Score = 107 (37.7 bits), Expect = 0.020, P = 0.020 Identities = 21/40 (52%), Positives = 31/40 (77%), Frame = +1 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K+G V A + E+E++EEDEE+EEE+E+EED+ EEE+ Sbjct: 424 KQGKVAA--AAPASEDEDEEEDEEEEEEDEEEEDDSEEEE 537 >L22660 Rat polymeric immunoglobulin receptor mRNA. Length = 326 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 6.3e-07, P = 6.3e-07 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 207 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +3 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 207 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 308 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +3 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 210 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 311 Score = 123 (43.3 bits), Expect = 3.3e-06, P = 3.3e-06 Identities = 20/35 (57%), Positives = 34/35 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++ Sbjct: 207 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 311 Score = 122 (42.9 bits), Expect = 4.2e-06, P = 4.2e-06 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +1 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E Sbjct: 64 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 198 Score = 120 (42.2 bits), Expect = 7.4e-06, P = 7.4e-06 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + KK++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 115 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 207 Score = 120 (42.2 bits), Expect = 7.4e-06, P = 7.4e-06 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +1 Query: 170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ ++++ EE+++EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 64 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 204 Score = 119 (41.9 bits), Expect = 9.6e-06, P = 9.6e-06 Identities = 22/59 (37%), Positives = 42/59 (71%), Frame = +1 Query: 156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K I Y +P + +V ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++++E Sbjct: 4 KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEE 180 Score = 118 (41.5 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 21/37 (56%), Positives = 33/37 (89%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 G + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 201 GGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 311 Score = 117 (41.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +1 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E Sbjct: 61 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 183 Score = 115 (40.5 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 20/37 (54%), Positives = 33/37 (89%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 G + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE+ Sbjct: 204 GEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 314 Score = 109 (38.4 bits), Expect = 0.00014, P = 0.00014 Identities = 18/32 (56%), Positives = 31/32 (96%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E+E++ Sbjct: 222 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKK 317 Score = 105 (37.0 bits), Expect = 0.00040, P = 0.00040 Identities = 17/32 (53%), Positives = 31/32 (96%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E++++ Sbjct: 225 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKK 320 Score = 103 (36.3 bits), Expect = 0.00068, P = 0.00068 Identities = 21/41 (51%), Positives = 33/41 (80%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---- 209 G + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 201 GGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKK 323 Score = 102 (35.9 bits), Expect = 0.00087, P = 0.00087 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKK 225 Score = 101 (35.6 bits), Expect = 0.0011, P = 0.0011 Identities = 21/42 (50%), Positives = 33/42 (78%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----- 209 G + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 201 GGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 326 Score = 100 (35.2 bits), Expect = 0.0015, P = 0.0015 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 228 Score = 98 (34.5 bits), Expect = 0.0025, P = 0.0025 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 231 Score = 96 (33.8 bits), Expect = 0.0042, P = 0.0042 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 234 Score = 86 (30.3 bits), Expect = 0.056, P = 0.055 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKK 249 Score = 81 (28.5 bits), Expect = 0.20, P = 0.18 Identities = 21/47 (44%), Positives = 30/47 (63%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 + KK++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 115 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 255 >AF040950 Mus musculus killer cell inhibitory-like protein p91A gene, exon Length = 994 Minus Strand HSPs: Score = 142 (50.0 bits), Expect = 6.3e-07, P = 6.3e-07 Identities = 24/37 (64%), Positives = 36/37 (97%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + +KKKKEEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 464 QTNKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 354 Score = 134 (47.2 bits), Expect = 7.3e-06, P = 7.3e-06 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +++ KKK+EEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 467 KQTNKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 357 Score = 133 (46.8 bits), Expect = 9.7e-06, P = 9.7e-06 Identities = 22/38 (57%), Positives = 35/38 (92%), Frame = -3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 + K KK++EEEE+EE+EE+EEEEE+EE+E+EEE++++ Sbjct: 464 QTNKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 351 Score = 123 (43.3 bits), Expect = 0.00017, P = 0.00017 Identities = 21/35 (60%), Positives = 33/35 (94%), Frame = -3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 455 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 351 >U00762 Rattus norvegicus clone1 polymeric immunoglobulin receptor mRNA 3' Length = 319 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 6.4e-07, P = 6.4e-07 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 213 Score = 122 (42.9 bits), Expect = 4.3e-06, P = 4.3e-06 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +1 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E Sbjct: 70 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 204 Score = 120 (42.2 bits), Expect = 7.5e-06, P = 7.5e-06 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + KK++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 121 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 213 Score = 120 (42.2 bits), Expect = 7.5e-06, P = 7.5e-06 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +1 Query: 170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ ++++ EE+++EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 70 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 210 Score = 120 (42.2 bits), Expect = 7.5e-06, P = 7.5e-06 Identities = 23/63 (36%), Positives = 45/63 (71%), Frame = +1 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 +K+ K I Y +P + +V ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++ Sbjct: 1 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 177 Query: 212 DDE 214 ++E Sbjct: 178 EEE 186 Score = 117 (41.2 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +1 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E Sbjct: 67 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 189 Score = 105 (37.0 bits), Expect = 0.00041, P = 0.00041 Identities = 18/26 (69%), Positives = 26/26 (100%), Frame = +3 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEE 209 +EEEE+EE+EE+EEEEE+EE+E+EE+ Sbjct: 210 REEEEEEEEEEEEEEEEEEEEEEEEK 287 Score = 102 (35.9 bits), Expect = 0.00089, P = 0.00089 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKK 231 Score = 100 (35.2 bits), Expect = 0.0015, P = 0.0015 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 234 Score = 99 (34.8 bits), Expect = 0.0020, P = 0.0020 Identities = 17/24 (70%), Positives = 24/24 (100%), Frame = +3 Query: 187 EEDEEDEEDEEEEEDEEDEDEEED 210 EE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 213 EEEEEEEEEEEEEEEEEEEEEEEE 284 Score = 99 (34.8 bits), Expect = 0.0020, P = 0.0020 Identities = 16/28 (57%), Positives = 28/28 (100%), Frame = +3 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 +++EEEE+EE+EE+EEEEE+EE+E++++ Sbjct: 210 REEEEEEEEEEEEEEEEEEEEEEEEKKK 293 Score = 98 (34.5 bits), Expect = 0.0026, P = 0.0025 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 237 Score = 96 (33.8 bits), Expect = 0.0043, P = 0.0043 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 240 Score = 96 (33.8 bits), Expect = 0.0043, P = 0.0043 Identities = 16/24 (66%), Positives = 24/24 (100%), Frame = +3 Query: 188 EDEEDEEDEEEEEDEEDEDEEEDD 211 E+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 213 EEEEEEEEEEEEEEEEEEEEEEEE 284 Score = 94 (33.1 bits), Expect = 0.0073, P = 0.0072 Identities = 15/25 (60%), Positives = 25/25 (100%), Frame = +3 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDDE 214 EE+EE+EEEEE+EE+E+EEE+++++ Sbjct: 213 EEEEEEEEEEEEEEEEEEEEEEEEK 287 Score = 93 (32.7 bits), Expect = 0.0094, P = 0.0093 Identities = 15/24 (62%), Positives = 24/24 (100%), Frame = +3 Query: 189 DEEDEEDEEEEEDEEDEDEEEDDD 212 +EE+EE+EEEEE+EE+E+EEE+++ Sbjct: 213 EEEEEEEEEEEEEEEEEEEEEEEE 284 Score = 92 (32.4 bits), Expect = 0.012, P = 0.012 Identities = 15/29 (51%), Positives = 28/29 (96%), Frame = +3 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 ++++EEEE+EE+EE+EEEEE+EE++ +++ Sbjct: 213 EEEEEEEEEEEEEEEEEEEEEEEEKKKKK 299 Score = 86 (30.3 bits), Expect = 0.057, P = 0.056 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKK 255 Score = 81 (28.5 bits), Expect = 0.21, P = 0.19 Identities = 21/47 (44%), Positives = 30/47 (63%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 + KK++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 121 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 261 Score = 75 (26.4 bits), Expect = 2.9, P = 0.95 Identities = 18/36 (50%), Positives = 25/36 (69%), Frame = +3 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEE----------- 208 +EEEE+EE+EE+EEEEE+EE+E+EE Sbjct: 210 REEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKK 317 >Y15491 Pongo pygmaeus gene encoding fertilin alpha Length = 3081 Plus Strand HSPs: Score = 144 (50.7 bits), Expect = 6.5e-07, P = 6.5e-07 Identities = 28/47 (59%), Positives = 39/47 (82%), Frame = +1 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 KP+AA+ V EK +K++EEEE+EE EE+EEEEE+EE+E+EEE+ D Sbjct: 2395 KPEAAE--VATEEKEEKEEEEEEEEEKEEEEEEEEEEEEEEEEEESD 2529 Score = 129 (45.4 bits), Expect = 5.6e-05, P = 5.6e-05 Identities = 24/52 (46%), Positives = 41/52 (78%), Frame = +1 Query: 163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 A+ P A + AE + ++KEE+E+EE+EE+E+EEE+EE+E+EEE++++E Sbjct: 2365 AEALPPAPEIKPEAAEVATEEKEEKEEEEEEEEEKEEEEEEEEEEEEEEEEE 2520 Score = 126 (44.4 bits), Expect = 0.00013, P = 0.00013 Identities = 28/49 (57%), Positives = 38/49 (77%), Frame = +1 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KP+AA+ V EK +K++EEEE+EE EE+EEEEE+EE+E+EEE E Sbjct: 2395 KPEAAE--VATEEKEEKEEEEEEEEEKEEEEEEEEEEEEEEEEE----E 2523 >U00763 Rattus norvegicus clone2 polymeric immunoglobulin receptor mRNA 3' Length = 302 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188 Score = 122 (42.9 bits), Expect = 4.6e-06, P = 4.6e-06 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E Sbjct: 45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 179 Score = 120 (42.2 bits), Expect = 7.9e-06, P = 7.9e-06 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +3 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + KK++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 96 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188 Score = 120 (42.2 bits), Expect = 7.9e-06, P = 7.9e-06 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +3 Query: 170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ ++++ EE+++EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 185 Score = 117 (41.2 bits), Expect = 1.8e-05, P = 1.8e-05 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E Sbjct: 42 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 164 Score = 115 (40.5 bits), Expect = 3.1e-05, P = 3.1e-05 Identities = 18/41 (43%), Positives = 36/41 (87%), Frame = +3 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +V ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++++E Sbjct: 39 LVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEE 161 Score = 106 (37.3 bits), Expect = 0.00033, P = 0.00033 Identities = 18/37 (48%), Positives = 31/37 (83%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E KK+EE+E++E EE++ EE+ EE+E+EEE++++E Sbjct: 36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEE 146 Score = 102 (35.9 bits), Expect = 0.00094, P = 0.00094 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKK 206 Score = 100 (35.2 bits), Expect = 0.0016, P = 0.0016 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 209 Score = 98 (34.5 bits), Expect = 0.0027, P = 0.0027 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 212 Score = 96 (33.8 bits), Expect = 0.0045, P = 0.0045 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 215 Score = 86 (30.3 bits), Expect = 0.061, P = 0.059 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKK 230 Score = 81 (28.5 bits), Expect = 0.22, P = 0.20 Identities = 21/47 (44%), Positives = 30/47 (63%), Frame = +3 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 + KK++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 96 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 236 >U01145 Rattus norvegicus clone 923 polymeric immunoglobulin receptor mRNA Length = 511 Plus Strand HSPs: Score = 127 (44.7 bits), Expect = 6.8e-07, P = 6.8e-07 Identities = 22/33 (66%), Positives = 32/33 (96%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 374 Score = 122 (42.9 bits), Expect = 8.1e-06, P = 8.1e-06 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E Sbjct: 234 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 368 Score = 120 (42.2 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 22/46 (47%), Positives = 39/46 (84%), Frame = +3 Query: 170 AKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ +++++ EE+ EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 234 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEE 371 Score = 120 (42.2 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 23/63 (36%), Positives = 45/63 (71%), Frame = +3 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 +K+ K I Y +P + +V ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++ Sbjct: 165 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 341 Query: 212 DDE 214 ++E Sbjct: 342 EEE 350 Score = 119 (41.9 bits), Expect = 4.3e-05, P = 4.3e-05 Identities = 21/29 (72%), Positives = 29/29 (100%), Frame = +3 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 +KK+EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 288 EKKEEEEEEEEEEEEEEEEEEEEEEEEEE 374 Score = 117 (41.2 bits), Expect = 0.00011, P = 0.00011 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E Sbjct: 231 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 353 Score = 116 (40.8 bits), Expect = 0.00016, P = 0.00016 Identities = 19/30 (63%), Positives = 30/30 (100%), Frame = +2 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEEE+EE+EE+EEEEE+EE+E+EEE+++++ Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 463 Score = 114 (40.1 bits), Expect = 0.00035, P = 0.00035 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 +EEEE+EE+EE+EEEEE+EE+E+EEE+++ Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460 Score = 113 (39.8 bits), Expect = 0.00049, P = 0.00049 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 ++EEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460 Score = 112 (39.4 bits), Expect = 0.00072, P = 0.00072 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460 Score = 111 (39.1 bits), Expect = 0.00099, P = 0.00099 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460 Score = 107 (37.7 bits), Expect = 0.0036, P = 0.0036 Identities = 18/29 (62%), Positives = 29/29 (100%), Frame = +2 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 ++++EEEE+EE+EE+EEEEE+EE+E+EE+ Sbjct: 377 EEEEEEEEEEEEEEEEEEEEEEEEEEEEK 463 Score = 102 (35.9 bits), Expect = 0.017, P = 0.017 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 395 Score = 100 (35.2 bits), Expect = 0.031, P = 0.031 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 398 Score = 98 (34.5 bits), Expect = 0.058, P = 0.056 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 401 Score = 98 (34.5 bits), Expect = 0.059, P = 0.057 Identities = 16/32 (50%), Positives = 30/32 (93%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE++ +++ Sbjct: 380 EEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 475 Score = 96 (33.8 bits), Expect = 0.10, P = 0.097 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKK 404 Score = 88 (31.0 bits), Expect = 1.1, P = 0.65 Identities = 19/37 (51%), Positives = 29/37 (78%), Frame = +2 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209 ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 484 Score = 86 (30.3 bits), Expect = 1.9, P = 0.84 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKK 419 Score = 86 (30.3 bits), Expect = 1.9, P = 0.85 Identities = 19/38 (50%), Positives = 29/38 (76%), Frame = +2 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209 ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 487 Score = 84 (29.6 bits), Expect = 3.4, P = 0.96 Identities = 19/39 (48%), Positives = 29/39 (74%), Frame = +2 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209 ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKK 490 Score = 82 (28.9 bits), Expect = 5.8, P = 1.0 Identities = 19/40 (47%), Positives = 29/40 (72%), Frame = +2 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209 ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKK 493 >X72957 X.laevis mRNA for nucleolin Length = 2580 Plus Strand HSPs: Score = 134 (47.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07 Identities = 64/222 (28%), Positives = 89/222 (40%), Frame = +1 Query: 21 TCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP 80 TC P V ++ +K ++ K K + + D E + +P Sbjct: 4 TCLSHLTNTTPAIMVKLAKGAKTQAKPKKAAPPPPKDMDDSDEEEDSEDESSEEEMEVPV 183 Query: 81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD- 139 K KK P A P A + P KG PG G AKK +D+ Sbjct: 184 KKTPAKKAATP-AKATPGKAATPAKATVTPGKKGATPGAKNGKQAKKQESEEEEDDSDEE 360 Query: 140 -----KQPYEKKAAKLKEKYEKDIAAY----RAKGKPDA----AKKGVVK---AEKSKKK 183 K+P KKA KE+ E+D + KP A AK VK A+KS K Sbjct: 361 DQKPIKKPIAKKAVAKKEESEEDDEDEDEDESEEEKPVAKRPLAKNPPVKVTPAKKSTGK 540 Query: 184 KEEEEDEEDEEDEEEE------------EDEEDEDEEEDDDDE 214 K+E +DEEDE +EE+ + +E EDEE D+D+E Sbjct: 541 KQESDDEEDESEEEKPVAKKPPAKKPAGKKQESEDEESDEDEE 669 Score = 128 (45.1 bits), Expect = 7.1e-05, P = 7.1e-05 Identities = 32/107 (29%), Positives = 56/107 (52%), Frame = +1 Query: 109 RPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKL----KEKYEKDIAAYRAK 164 RP K +P + + K G+ + +D+ EK AK K +K + Sbjct: 481 RPLAK--NPPVKVTPAKKSTGKKQESDDEEDESEEEKPVAKKPPAKKPAGKKQESEDEES 654 Query: 165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + V A+K KK + E+D++D+++++D++DED+EEDDDDE Sbjct: 655 DEDEEEPMEVASAQKGKKTAPAKA-EDDDDDDDDDDDDDDEDDEEDDDDE 801 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021 Identities = 24/70 (34%), Positives = 48/70 (68%), Frame = +1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKP---DAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 K+P KK A K++ E D + + +P +A+KG K K +++++D++D++D+ Sbjct: 595 KKPPAKKPAGKKQESE-DEESDEDEEEPMEVASAQKG--KKTAPAKAEDDDDDDDDDDDD 765 Query: 197 EEEEDEEDEDEEE 209 ++E+DEED+D+E+ Sbjct: 766 DDEDDEEDDDDEQ 804 Score = 106 (37.3 bits), Expect = 0.028, P = 0.027 Identities = 32/89 (35%), Positives = 46/89 (51%), Frame = +1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK--KKEEEEDEEDEEDEE 197 K P +K A K K AA AK KKG K+ K KK+E E+EED+ DEE Sbjct: 187 KTPAKKAATPAKATPGK--AATPAKATVTPGKKGATPGAKNGKQAKKQESEEEEDDSDEE 360 Query: 198 EEE--------------DEEDEDEEEDDDDE 214 +++ +E +ED+E++D+DE Sbjct: 361 DQKPIKKPIAKKAVAKKEESEEDDEDEDEDE 453 Score = 91 (32.0 bits), Expect = 1.4, P = 0.76 Identities = 22/58 (37%), Positives = 36/58 (62%), Frame = +1 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 K AK +E E++ + KP KK + K K+ KKEE E+++++EDE+E E+E+ Sbjct: 307 KQAKKQESEEEEDDSDEEDQKP--IKKPIAK--KAVAKKEESEEDDEDEDEDESEEEK 468 Score = 91 (32.0 bits), Expect = 1.4, P = 0.76 Identities = 24/60 (40%), Positives = 35/60 (58%), Frame = +1 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 K AK +E E++ + KP KK + K +KK EE EED+EDE+E+E EE++ Sbjct: 307 KQAKKQESEEEEDDSDEEDQKP--IKKPIAKKAVAKK----EESEEDDEDEDEDESEEEK 468 Score = 85 (29.9 bits), Expect = 6.8, P = 1.0 Identities = 25/79 (31%), Positives = 48/79 (60%), Frame = +1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKP---DAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 K+P KK A K++ E D + + +P +A+KG K K +++++D++D++D+ Sbjct: 595 KKPPAKKPAGKKQESE-DEESDEDEEEPMEVASAQKG--KKTAPAKAEDDDDDDDDDDDD 765 Query: 197 EEEEDEEDEDEE---------E 209 ++E+DEED+D+E E Sbjct: 766 DDEDDEEDDDDEQQGPAKRKKE 831 Score = 50 (17.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07 Identities = 10/21 (47%), Positives = 15/21 (71%), Frame = +2 Query: 194 EDEEEEEDEEDEDEEEDDDDE 214 E+ E + +EED +EEE +D E Sbjct: 2054 EEVEVDVEEEDLEEEEVEDSE 2116 >AC004073 Human Chromosome X, complete sequence. Length = 79,612 Plus Strand HSPs: Score = 144 (50.7 bits), Expect = 8.0e-07, P = 8.0e-07 Identities = 24/38 (63%), Positives = 37/38 (97%), Frame = +2 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++K KKK+EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1115 SQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1228 Score = 138 (48.6 bits), Expect = 5.0e-06, P = 5.0e-06 Identities = 23/37 (62%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K KK++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1121 KKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1231 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1124 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1240 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1130 KKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1246 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05 Identities = 25/68 (36%), Positives = 49/68 (72%), Frame = +2 Query: 147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206 A L+ + + + + K K + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+ Sbjct: 1076 ATALQPGRQSETLSQKKKKKEEEEEEE--EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1249 Query: 207 EEEDDDDE 214 EEE++++E Sbjct: 1250 EEEEEEEE 1273 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05 Identities = 25/68 (36%), Positives = 49/68 (72%), Frame = +2 Query: 147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206 A L+ + + + + K K + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+ Sbjct: 1076 ATALQPGRQSETLSQKKKKKEEEEEE---EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1246 Query: 207 EEEDDDDE 214 EEE++++E Sbjct: 1247 EEEEEEEE 1270 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05 Identities = 25/70 (35%), Positives = 49/70 (70%), Frame = +2 Query: 147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206 A L+ + + + + K K + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+ Sbjct: 1076 ATALQPGRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1255 Query: 207 EEEDDDDE-- 214 EEE++++E Sbjct: 1256 EEEEEEEEGE 1285 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05 Identities = 26/74 (35%), Positives = 50/74 (67%), Frame = +2 Query: 141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 200 QP +++ L +K +K + + + ++ + E+ ++++EEEE+EE+EE+EEEEE Sbjct: 1088 QP-GRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1264 Query: 201 DEEDEDEEEDDDDE 214 +EE+E EEE+ ++E Sbjct: 1265 EEEEEGEEEEGEEE 1306 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ ++E Sbjct: 1181 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEE 1291 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE +++E Sbjct: 1184 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEE 1294 Score = 125 (44.0 bits), Expect = 0.00020, P = 0.00020 Identities = 28/78 (35%), Positives = 50/78 (64%), Frame = +2 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 TA + E + K K+K E++ + + + ++ + E+ ++++EEEE+EE+EE Sbjct: 1079 TALQPGRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1258 Query: 195 DEEEEED-EEDEDEEEDD 211 +EEEEE+ EE+E EEE+D Sbjct: 1259 EEEEEEEGEEEEGEEEED 1312 Score = 124 (43.7 bits), Expect = 0.00026, P = 0.00026 Identities = 28/80 (35%), Positives = 53/80 (66%), Frame = +2 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 TA + E + K K+K E++ + + + ++ + E+ ++++EEEE+EE+EE Sbjct: 1079 TALQPGRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEE--EEEEEEEEEEEEEEEEEEE 1252 Query: 195 DEEEEEDEEDEDEE-EDDDDE 214 +EEEEE+EE E+EE E+++D+ Sbjct: 1253 EEEEEEEEEGEEEEGEEEEDQ 1315 Score = 119 (41.9 bits), Expect = 0.0010, P = 0.0010 Identities = 26/70 (37%), Positives = 47/70 (67%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K KE+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EEEE +EE Sbjct: 1118 QKK--KKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEE 1291 Query: 204 DEDEEEDDDD 213 + +EEED D Sbjct: 1292 EGEEEEDQLD 1321 Score = 106 (37.3 bits), Expect = 0.033, P = 0.032 Identities = 23/66 (34%), Positives = 44/66 (66%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE--EEED 201 +KK K +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE EEE Sbjct: 1118 QKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEG 1297 Query: 202 EEDEDE 207 EE+ED+ Sbjct: 1298 EEEEDQ 1315 Score = 105 (37.0 bits), Expect = 0.043, P = 0.042 Identities = 21/64 (32%), Positives = 43/64 (67%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+ EEEE EE Sbjct: 1124 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEGEE 1303 Query: 204 DEDE 207 +ED+ Sbjct: 1304 EEDQ 1315 >U93872 Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA Length = 133,661 Minus Strand HSPs: Score = 144 (50.7 bits), Expect = 8.0e-07, P = 8.0e-07 Identities = 30/82 (36%), Positives = 48/82 (58%), Frame = -3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 +N DD++ E ++ E D + D + E+ ++ +EEEDEE+ Sbjct: 126621 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEE 126442 Query: 193 EEDEEEEEDEEDEDEEEDDDDE 214 +E+E+EEEDEE+E++EEDDDDE Sbjct: 126441 DEEEDEEEDEEEEEDEEDDDDE 126376 Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06 Identities = 30/97 (30%), Positives = 58/97 (59%), Frame = -3 Query: 119 LSIGDVAKKLGEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 +SIG + G ++TA ++A+K +++ ++ A G + +K+ V Sbjct: 126804 ISIGSSSPSEGSWGDDTAMLVLLAEIAEEASKNEKECSENNQAGEDNGDNEISKESQVDK 126625 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + K +EEE E DEEDEE++E++++ED+EEDD+++ Sbjct: 126624 DDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEED 126514 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 30/83 (36%), Positives = 48/83 (57%), Frame = -3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 +N DD++ E ++ E D + D + E+ ++ +EEEDEE+ Sbjct: 126621 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEE 126442 Query: 193 EEDEEEEEDEEDEDEEEDDDDE- 214 +E+E+EEEDEE+E++EEDDDDE Sbjct: 126441 DEEEDEEEDEEEEEDEEDDDDED 126373 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ +++ EEE++EEDEE+EE+EED++DED E+++DDE Sbjct: 126459 EEDEEEDEEEDEEEDEEEEEDEEDDDDEDNEDEEDDE 126349 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05 Identities = 25/87 (28%), Positives = 55/87 (63%), Frame = -3 Query: 128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187 L E+ + ++K+ E A ++ + +I+ K D K + +++ ++ EE+ Sbjct: 126738 LAEIAEEASKNEKECSENNQAG-EDNGDNEISKESQVDKDDNDNKDDEEEQETDEEDEED 126562 Query: 188 EDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++E+DEED+EE+++E+DE+++E+DD+E Sbjct: 126561 DEEDDEEDDEEDDEEDDEEDDEEDDEE 126481 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05 Identities = 23/38 (60%), Positives = 34/38 (89%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEE-DEEEEEDEEDEDEEEDDDDE 214 E +++ EEE++EEDEE DEEEEEDEED+D+E+++D+E Sbjct: 126471 EDDEEEDEEEDEEEDEEEDEEEEEDEEDDDDEDNEDEE 126358 Score = 126 (44.4 bits), Expect = 0.00015, P = 0.00015 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEDEE+EEDEE+++DE++EDEE+D++++ Sbjct: 126450 EEEDEEEDEEEDEEEEEDEEDDDDEDNEDEEDDEEED 126340 Score = 118 (41.5 bits), Expect = 0.0014, P = 0.0014 Identities = 21/38 (55%), Positives = 33/38 (86%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD 213 E ++ +EEEEDEED++DE E+EED+E+ED++ED++D Sbjct: 126432 EDEEEDEEEEEDEEDDDDEDNEDEEDDEEEDKKEDEED 126319 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023 Identities = 20/40 (50%), Positives = 35/40 (87%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD---E 214 E+ ++++EEEDEE+EEDEE+++DE++EDEE+D+++ E Sbjct: 126450 EEEDEEEDEEEDEEEEEDEEDDDDEDNEDEEDDEEEDKKE 126331 Score = 105 (37.0 bits), Expect = 0.043, P = 0.042 Identities = 21/41 (51%), Positives = 33/41 (80%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD--- 213 E ++ +EEEEDEED++DE E+EED+E+ED++ED++D Sbjct: 126432 EDEEEDEEEEEDEEDDDDEDNEDEEDDEEEDKKEDEEDGGD 126310 Score = 91 (32.0 bits), Expect = 1.7, P = 0.81 Identities = 10/37 (27%), Positives = 31/37 (83%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ +++++E++ +E ++DE+E++DE+ +DE++ D++ Sbjct: 125841 QQDEQQQDEQQQDEQQQDEQEQQDEQQQDEQQQQDEQ 125731 Score = 90 (31.7 bits), Expect = 2.2, P = 0.88 Identities = 11/47 (23%), Positives = 35/47 (74%), Frame = -3 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 D ++ + ++ +++ E+++DE+ ++DE+E+++E+++ EE++ +E Sbjct: 125820 DEQQQDEQQQDEQEQQDEQQQDEQQQQDEQEQQEEQEQQEEQEQQEE 125680 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99 Identities = 17/35 (48%), Positives = 25/35 (71%), Frame = -2 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + ++S + E +EDEEDE DEEE +D ++EDE E Sbjct: 68632 ISPDQSSGESEYDEDEEDE-DEEENDDVQEEDEPE 68531 >X54504 D. melanogaster mRNA for troponin-T (DNA region with mapped upheld, Length = 1362 Plus Strand HSPs: Score = 142 (50.0 bits), Expect = 8.8e-07, P = 8.8e-07 Identities = 33/102 (32%), Positives = 59/102 (57%), Frame = +2 Query: 113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 K ++ G + K GE A + + P ++ AK E +D + ++ Sbjct: 932 KEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVED---------DEEVEE 1084 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 VV+ E + +++EEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1085 EVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1210 Score = 138 (48.6 bits), Expect = 2.9e-06, P = 2.9e-06 Identities = 59/192 (30%), Positives = 94/192 (48%), Frame = +2 Query: 31 PDASVNFSE--FSKKCSERWKTMSAKEKGKFEDMAKADKARYE-REMKTYIPPKGETK-- 85 P A F+E +K E W+ + E K++ + + Y+ +E+K + K Sbjct: 578 PLAIEGFAEAKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKAL 757 Query: 86 KKFKDPNA--PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM-WNNTAADDKQP 142 KK DP A K PP S+Y ++ S D KKL E W+ + D + Sbjct: 758 KKGLDPEALTGKYPPK--IQVASKYERRVDTR----SYDD-KKKLFEGGWDEISKDSNEK 916 Query: 143 Y--EKK---AAKLKEKYEKDIAAYRAK--GKPDAAKKGVVKAEKSKKKKEEEEDEEDEE- 194 EKK + K K K K G+P+ + G A+ + E++E+ E+E Sbjct: 917 IWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPE-GEEDAKADEDIVEDDEEVEEEVV 1093 Query: 195 DEEEEEDEEDEDEEEDDDDE 214 +EE+EEDEEDE+EEE++++E Sbjct: 1094 EEEDEEDEEDEEEEEEEEEE 1153 Score = 136 (47.9 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 34/102 (33%), Positives = 59/102 (57%), Frame = +2 Query: 113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 K ++ G + K GE A + + P ++ AK E +D + ++ Sbjct: 932 KEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVED---------DEEVEE 1084 Query: 173 GVVKAEKSKKKK-EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 VV+ E + ++ EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1085 EVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1213 Score = 119 (41.9 bits), Expect = 0.00066, P = 0.00066 Identities = 29/95 (30%), Positives = 53/95 (55%), Frame = +2 Query: 113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172 K ++ G + K GE A + + P ++ AK E +D + + ++ Sbjct: 932 KEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVEDDEEVEEEVVEEEDEE 1111 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 + E+ ++++EEEE+EE+EE+EEEEE+EE+E+E Sbjct: 1112 DE-EDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1213 >L13025 Rattus norvegicus (clone 2) mRNA sequence, 3' end GAA-triplet Length = 214 Plus Strand HSPs: Score = 129 (45.4 bits), Expect = 9.7e-07, P = 9.7e-07 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188 Score = 122 (42.9 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E Sbjct: 45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 179 Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +3 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + KK++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 96 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188 Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +3 Query: 170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ ++++ EE+++EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 185 Score = 118 (41.5 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 20/34 (58%), Positives = 32/34 (94%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + E+ K+++EEEE+EE+EE+EEEEE+EE+E+EE+ Sbjct: 90 QGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEK 191 Score = 117 (41.2 bits), Expect = 2.5e-05, P = 2.5e-05 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E Sbjct: 42 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 164 Score = 115 (40.5 bits), Expect = 4.4e-05, P = 4.4e-05 Identities = 18/41 (43%), Positives = 36/41 (87%), Frame = +3 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +V ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++++E Sbjct: 39 LVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEE 161 Score = 113 (39.8 bits), Expect = 7.4e-05, P = 7.4e-05 Identities = 19/32 (59%), Positives = 31/32 (96%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 EK ++++EEEE+EE+EE+EEEEE+EE+E+E++ Sbjct: 99 EKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKK 194 Score = 106 (37.3 bits), Expect = 0.00047, P = 0.00047 Identities = 18/37 (48%), Positives = 31/37 (83%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E KK+EE+E++E EE++ EE+ EE+E+EEE++++E Sbjct: 36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEE 146 Score = 106 (37.3 bits), Expect = 0.00047, P = 0.00047 Identities = 18/39 (46%), Positives = 34/39 (87%), Frame = +3 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 ++G K E+ ++++EEEE+EE+EE+EEEEE+EE++ +++ Sbjct: 87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 203 Score = 77 (27.1 bits), Expect = 0.87, P = 0.58 Identities = 17/60 (28%), Positives = 40/60 (66%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E + K +EK E++ + + K + ++ + E+ ++++EEEE+EE+EE+EE+++ ++ Sbjct: 36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEE---EEEEEEEEEEEEEEEEEEEEEEKKKKKK 206 Score = 69 (24.3 bits), Expect = 6.8, P = 1.0 Identities = 15/60 (25%), Positives = 40/60 (66%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E + K +EK E++ + + K + ++ + E+ ++++EEEE+EE+EE++++++ ++ Sbjct: 36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEE-EEEEEEEEEEEEEEEEEEEEKKKKKKKK 212 >M24398 Human parathymosin mRNA, complete cds. Length = 1109 Plus Strand HSPs: Score = 141 (49.6 bits), Expect = 9.8e-07, P = 9.8e-07 Identities = 46/117 (39%), Positives = 63/117 (53%), Frame = +1 Query: 96 RPPSAFF-LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 RPPSA L S P++ PG G +++K E AA E A LKEK Sbjct: 217 RPPSAVQGLSVSAPGPRLPAS-PGPGPGTMSEKSVE----AAA------ELSAKDLKEKK 363 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 EK K KK VV+ E++ ++EEEE ED E+E+E E+E++E+EEEDD+ Sbjct: 364 EK----VEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDE 525 Score = 127 (44.7 bits), Expect = 6.1e-05, P = 6.1e-05 Identities = 32/71 (45%), Positives = 43/71 (60%), Frame = +1 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E A LKEK EK K KK VV+ E++ ++EEEE ED EEE+E EE Sbjct: 331 ELSAKDLKEKKEK----VEEKASRKERKKEVVEEEENGAEEEEEETAED--GEEEDEGEE 492 Query: 204 DEDEEEDDDDE 214 +++EEE++DDE Sbjct: 493 EDEEEEEEDDE 525 Score = 122 (42.9 bits), Expect = 0.00025, P = 0.00025 Identities = 46/118 (38%), Positives = 64/118 (54%), Frame = +1 Query: 96 RPPSAFF-LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 RPPSA L S P++ PG G +++K E +A D + EKK K++EK Sbjct: 217 RPPSAVQGLSVSAPGPRLPAS-PGPGPGTMSEKSVEAAAELSAKDLK--EKKE-KVEEKA 384 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED-------E 207 + R K + + G + E+ + EEEDE +EEDEEEEE E+DE E Sbjct: 385 SRK---ERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE-EDDEGPALKRAAE 552 Query: 208 EEDDDD 213 EED+ D Sbjct: 553 EEDEAD 570 Score = 115 (40.5 bits), Expect = 0.0018, P = 0.0018 Identities = 39/137 (28%), Positives = 63/137 (45%), Frame = +1 Query: 78 IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAA 137 +PP ET+ + P +R + +RP+ GLS+ +L + Sbjct: 130 LPPLPETQLAERPPLPCRRRRR----HRARFRPRPPSAVQGLSVSAPGPRLPA---SPGP 288 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 EK E KD+ + K + A++K E+ K+ EEEE+ +EE+EE Sbjct: 289 GPGTMSEKSVEAAAELSAKDLKEKKEKVEEKASRK-----ERKKEVVEEEENGAEEEEEE 453 Query: 198 EEEDEEDEDEEEDDDDE 214 ED E+EDE E++D+E Sbjct: 454 TAEDGEEEDEGEEEDEE 504 Score = 113 (39.8 bits), Expect = 0.0030, P = 0.0030 Identities = 38/126 (30%), Positives = 66/126 (52%), Frame = +1 Query: 96 RPPSAFF-LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD----KQPYEKKAAKL 150 RPPSA L S P++ PG G +++K E +A D K+ E+KA++ Sbjct: 217 RPPSAVQGLSVSAPGPRLPAS-PGPGPGTMSEKSVEAAAELSAKDLKEKKEKVEEKASR- 390 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE-------EEEEDEE 203 KE+ +K++ G + ++ E+ + +EE+E+EE+E+DE EEEDE Sbjct: 391 KER-KKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEA 567 Query: 204 DEDEEEDDD 212 D ++ ++ Sbjct: 568 DPKRQKTEN 594 >AB002381 Human mRNA for KIAA0383 gene, partial cds. Length = 5810 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 32/81 (39%), Positives = 53/81 (65%), Frame = +2 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193 +T A+ +Q K + K KY + + +P ++G + E SK+ EEEE+EEDE Sbjct: 1421 STRANSRQSPAK--VQSKNKY-----LHSPESRPVTGERGQL-LELSKESSEEEEEEEDE 1576 Query: 194 EDEEEEEDEEDEDEEEDDDDE 214 E+EEEEE+EE+++EEE++++E Sbjct: 1577 EEEEEEEEEEEDEEEEEEEEE 1639 Score = 139 (48.9 bits), Expect = 3.4e-06, P = 3.4e-06 Identities = 31/81 (38%), Positives = 55/81 (67%), Frame = +2 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV---KAEKSKKKKEEEEDE 190 +T A+ +Q K + K KY + + +P ++G + E S++++EEE++E Sbjct: 1421 STRANSRQSPAK--VQSKNKY-----LHSPESRPVTGERGQLLELSKESSEEEEEEEDEE 1579 Query: 191 EDEEDEEEEEDEEDEDEEEDDDDE 214 E+EE+EEEEEDEE+E+EEE++++E Sbjct: 1580 EEEEEEEEEEDEEEEEEEEEEEEE 1651 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 29/79 (36%), Positives = 51/79 (64%), Frame = +2 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKP-DAAKKGVVKAEKSKKKKEEEEDEE 191 +T A+ +Q K +K K + + +G+ + +K+ + E+ + ++EEEE+EE Sbjct: 1421 STRANSRQSPAKVQSKNKYLHSPESRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEE 1600 Query: 192 DEEDEEEEEDEEDEDEEED 210 +EEDEEEEE+EE+E+EEE+ Sbjct: 1601 EEEDEEEEEEEEEEEEEEN 1657 Score = 121 (42.6 bits), Expect = 0.00055, P = 0.00055 Identities = 30/80 (37%), Positives = 54/80 (67%), Frame = +2 Query: 134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV---KAEKSKKKKEEEEDE 190 +T A+ +Q K + K KY + + +P ++G + E S++++EEE++E Sbjct: 1421 STRANSRQSPAK--VQSKNKY-----LHSPESRPVTGERGQLLELSKESSEEEEEEEDEE 1579 Query: 191 EDEEDEEEEEDEEDEDEEEDDDD--- 213 E+EE+EEEEEDEE+E+EEE++++ Sbjct: 1580 EEEEEEEEEEDEEEEEEEEEEEEEEN 1657 Score = 121 (42.6 bits), Expect = 0.00055, P = 0.00055 Identities = 35/103 (33%), Positives = 58/103 (56%), Frame = +2 Query: 133 NNTAADDKQPYEKKAAKLKE------KYEKDIAAYRAKGKPDAAK---KGV--------- 174 N +++++ EK+A +L E K E++I + RA + AK K Sbjct: 1322 NAAVSEEEREAEKEAERLMEQASCWEKEEQEILSTRANSRQSPAKVQSKNKYLHSPESRP 1501 Query: 175 VKAEKSKK---KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V E+ + KE E+EE+EEDEEEEE+EE+E+E+E++++E Sbjct: 1502 VTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEE 1630 Score = 103 (36.3 bits), Expect = 0.068, P = 0.065 Identities = 21/77 (27%), Positives = 43/77 (55%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + PD AK + + +KE+ +D E+EE Sbjct: 2399 EEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEEEE 2578 Query: 198 EEEDEEDEDEEEDDDDE 214 EE++E +E+ D DDE Sbjct: 2579 EEDEEPSHNEDHDADDE 2629 Score = 98 (34.5 bits), Expect = 0.014, Sum P(2) = 0.014 Identities = 18/25 (72%), Positives = 23/25 (92%), Frame = +2 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEE 208 K EEE+EE+EE+EEEEE+EE E+EE Sbjct: 2387 KPEEEEEEEEEEEEEEEEEEGEEEE 2461 Score = 97 (34.1 bits), Expect = 0.33, P = 0.28 Identities = 19/32 (59%), Positives = 25/32 (78%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K E K EEEE+EE+EE+EEEEE+E +E+E Sbjct: 2366 KPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEE 2461 Score = 97 (34.1 bits), Expect = 0.33, P = 0.28 Identities = 22/42 (52%), Positives = 29/42 (69%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE-----EEDDD 212 K E K EEEE+EE+EE+EEEEE+E +E+E E+D D Sbjct: 2366 KPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPD 2491 Score = 93 (32.7 bits), Expect = 0.92, P = 0.60 Identities = 18/40 (45%), Positives = 29/40 (72%), Frame = +2 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V S +K E++ + EE+EEEEE+EE+E+EEE+ ++E Sbjct: 2339 VSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEE 2458 Score = 86 (30.3 bits), Expect = 5.7, P = 1.0 Identities = 21/77 (27%), Positives = 41/77 (53%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ EK + D A + K +P+ + + A ++EEEEDEE +E+ Sbjct: 2435 EEEEGEEEEGGGNVEK-DPDGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDEEPSHNED 2611 Query: 198 EEEDEEDEDEEEDDDDE 214 + D+ED+ E + E Sbjct: 2612 HDADDEDDSHMESAEVE 2662 Score = 56 (19.7 bits), Expect = 0.014, Sum P(2) = 0.014 Identities = 23/106 (21%), Positives = 40/106 (37%), Frame = +2 Query: 90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149 DP + P + C RPK KG + + A ++ + K +++ Sbjct: 119 DPPLSRMPKGMWI--CQVCRPKKKGRK---LLHEKAAQIKRRYAKPIGRPKNKLKQRLLS 283 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED 195 + E + A+ +G PD K +K E + +D EED Sbjct: 284 VTSD-EGSMNAFTGRGSPDTEIKINIKQESADVNVIGNKDVVTEED 418 >U09820 Human helicase II (RAD54L) mRNA, complete cds. Length = 6115 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +3 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K V+ + S + K E+EE+E++E Sbjct: 1662 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 1829 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+EEED++D+ Sbjct: 1830 EEEEEEEEEEEEEDENDD 1883 Score = 138 (48.6 bits), Expect = 4.5e-06, P = 4.5e-06 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +3 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K + ++K EEEE EE EE+E Sbjct: 1662 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 1835 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+E+E+DD + Sbjct: 1836 EEEEEEEEEEEDENDDSK 1889 >M10668 Mouse DNA with homology to EBV IR3 repeat, segment 2, clone Mu2. Length = 451 Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 22/77 (28%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ K +E+ E++ + + +A ++ + E+ ++++EEE++EE+EE E+ Sbjct: 56 EEEEEQEQEQEKQEEE*EEE-QEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQ 232 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE++E+E+E+E++++E Sbjct: 233 EEEEQEEEEEQEEEEEE 283 Score = 126 (44.4 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 23/77 (29%), Positives = 51/77 (66%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 + +Q EK+ + +E+ E++ + + ++ + E+ ++++EEEE++E EE+E+ Sbjct: 68 EQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQ 247 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+E++E+EEE+ + E Sbjct: 248 EEEEEQEEEEEEEQEQE 298 Score = 126 (44.4 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 20/77 (25%), Positives = 56/77 (72%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++A + +E+ ++ + + + + ++ + E+ ++++E+EE+EE+E+++E Sbjct: 119 EEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQE 298 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE EE+E++EE++++E Sbjct: 299 EEEQEEEEEQEEEEEEE 349 Score = 124 (43.7 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 21/77 (27%), Positives = 53/77 (68%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + ++ ++++EEEE EE+EE+E+ Sbjct: 110 EEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQ 289 Query: 198 EEEDEEDEDEEEDDDDE 214 E+E+EE E+EEE +++E Sbjct: 290 EQEEEEQEEEEEQEEEE 340 Score = 123 (43.3 bits), Expect = 2.3e-06, P = 2.3e-06 Identities = 23/77 (29%), Positives = 53/77 (68%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +EK E++ + + + + ++ + E+ ++++EEE++EE EE+EE Sbjct: 44 EEQEEEEEEQEQEQEKQEEE*EEEQEE-EEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEE 220 Query: 198 EEEDEEDEDEEEDDDDE 214 E+E EE+E EEE++ +E Sbjct: 221 EQEQEEEEQEEEEEQEE 271 Score = 123 (43.3 bits), Expect = 2.3e-06, P = 2.3e-06 Identities = 20/77 (25%), Positives = 54/77 (70%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +++Q E++ + ++ E++ + + + ++ + E+ ++++EEEE++E+EE+EE Sbjct: 107 EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEE 286 Query: 198 EEEDEEDEDEEEDDDDE 214 +E++EE+++EEE+ ++E Sbjct: 287 QEQEEEEQEEEEEQEEE 337 Score = 119 (41.9 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 20/77 (25%), Positives = 54/77 (70%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 + ++ +++ + +E+ E++ + + + + ++ + E+ ++++EEEE++E EE+E+ Sbjct: 131 EQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQ 310 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+E++E+EEE+ ++E Sbjct: 311 EEEEEQEEEEEEEGEEE 361 Score = 117 (41.2 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 22/76 (28%), Positives = 54/76 (71%), Frame = +2 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +KQ E + + +E+ +++ A + + + + ++ + E+ ++++EE+E EE+E++EEE Sbjct: 86 EKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEE--QEEEQEEEEEEQEQEEEEQEEEE 259 Query: 199 EEDEEDEDEEEDDDDE 214 E++EE+E+E+E +++E Sbjct: 260 EQEEEEEEEQEQEEEE 307 Score = 117 (41.2 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 20/77 (25%), Positives = 52/77 (67%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++ Q E++ + +E+ +++ + + ++ + E+ ++++EE+E EE+E++EE Sbjct: 140 EEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEE 319 Query: 198 EEEDEEDEDEEEDDDDE 214 EE++EE+E+E E++++E Sbjct: 320 EEQEEEEEEEGEEEEEE 370 Score = 116 (40.8 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 19/76 (25%), Positives = 54/76 (71%), Frame = +2 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 ++Q E++ + +++ E++ + + + ++ +A++ +++++E+E+EE EE++EE Sbjct: 32 EEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEE 211 Query: 199 EEDEEDEDEEEDDDDE 214 EE+E++++EEE +++E Sbjct: 212 EEEEQEQEEEEQEEEE 259 Score = 115 (40.5 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 22/72 (30%), Positives = 47/72 (65%), Frame = +2 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +++ E++ + +E+ E++ + + ++ + E+ ++++EEEE EE+EE EEE Sbjct: 158 EEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEEEEQEEE 337 Query: 199 EEDEEDEDEEED 210 EE+E +E+EEE+ Sbjct: 338 EEEEGEEEEEEE 373 Score = 115 (40.5 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 21/74 (28%), Positives = 50/74 (67%), Frame = +2 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 +Q E++ + +E+ E+ + + + ++ + E+ +++++E+E+EE EE+EE+E Sbjct: 152 EQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEEEEQE 331 Query: 200 EDEEDEDEEEDDDD 213 E+EE+E EEE++++ Sbjct: 332 EEEEEEGEEEEEEE 373 Score = 114 (40.1 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 18/77 (23%), Positives = 55/77 (71%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ +++ + +E+ E++ + K + + ++ + E+ ++ +E+EE+E+++E+EE Sbjct: 11 EEQEQEQEEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEE 190 Query: 198 EEEDEEDEDEEEDDDDE 214 +EE++E+E+EE++ ++E Sbjct: 191 QEEEQEEEEEEQEQEEE 241 Score = 114 (40.1 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 17/77 (22%), Positives = 53/77 (68%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 + ++ E++ + +++ EK + + + ++ + ++ +++++EEE++E+E++EE Sbjct: 35 EQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEE 214 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE E++E+E+E+++++ Sbjct: 215 EEEQEQEEEEQEEEEEQ 265 Score = 113 (39.8 bits), Expect = 3.4e-05, P = 3.4e-05 Identities = 19/77 (24%), Positives = 52/77 (67%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +++Q E++ + +++ E++ + + + ++ + E+ +++ +E+E+EE E++EE Sbjct: 8 EEEQEQEQEEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEE 187 Query: 198 EEEDEEDEDEEEDDDDE 214 E+E+E++E+EEE + +E Sbjct: 188 EQEEEQEEEEEEQEQEE 238 Score = 112 (39.4 bits), Expect = 4.5e-05, P = 4.5e-05 Identities = 20/71 (28%), Positives = 49/71 (69%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +++Q E++ + +++ E++ + + + ++ + E+ ++++EE+E+EE++E+EE Sbjct: 161 EEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEEEEQEEEE 340 Query: 198 EEEDEEDEDEE 208 EEE EE+E+EE Sbjct: 341 EEEGEEEEEEE 373 Score = 112 (39.4 bits), Expect = 4.5e-05, P = 4.5e-05 Identities = 18/76 (23%), Positives = 54/76 (71%), Frame = +2 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +++ E++ + +E+ E++ + + + + ++ + E+ +++EEEE E++EE++EE Sbjct: 20 EQEQEEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEE 199 Query: 199 EEDEEDEDEEEDDDDE 214 E++EE+E++E++++++ Sbjct: 200 EQEEEEEEQEQEEEEQ 247 Score = 109 (38.4 bits), Expect = 0.00020, P = 0.00020 Identities = 21/77 (27%), Positives = 51/77 (66%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 +++Q E++ + +E+ E++ + + K + + + E+ ++++ +E++EE++E EE Sbjct: 8 EEEQEQEQEEQE-EEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEE 184 Query: 198 EEEDEEDEDEEEDDDDE 214 EE++EE E+EEE+ + E Sbjct: 185 EEQEEEQEEEEEEQEQE 235 Score = 97 (34.1 bits), Expect = 0.042, P = 0.041 Identities = 16/32 (50%), Positives = 26/32 (81%), Frame = +2 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++EEE+++E EE EEE+E+EE+E E+E + E Sbjct: 2 QEEEEQEQEQEEQEEEQEEEEEEQEQEQEKQE 97 >U72938 Human putative DNA dependent ATPase and helicase (ATRX) mRNA, Length = 10,212 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +2 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K V+ + S + K E+EE+E++E Sbjct: 4283 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4450 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+EEED++D+ Sbjct: 4451 EEEEEEEEEEEEEDENDD 4504 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +2 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K + ++K EEEE EE EE+E Sbjct: 4283 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4456 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+E+E+DD + Sbjct: 4457 EEEEEEEEEEEDENDDSK 4510 >U72937 Human putative DNA dependent ATPase and helicase (ATRX) mRNA, Length = 10,326 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +2 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K V+ + S + K E+EE+E++E Sbjct: 4397 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4564 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+EEED++D+ Sbjct: 4565 EEEEEEEEEEEEEDENDD 4618 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +2 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K + ++K EEEE EE EE+E Sbjct: 4397 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4570 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+E+E+DD + Sbjct: 4571 EEEEEEEEEEEDENDDSK 4624 >U75653 Human zinc finger helicase (Znf-HX) mRNA, complete cds. Length = 10,358 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +1 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K V+ + S + K E+EE+E++E Sbjct: 4393 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4560 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+EEED++D+ Sbjct: 4561 EEEEEEEEEEEEEDENDD 4614 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +1 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K + ++K EEEE EE EE+E Sbjct: 4393 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4566 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+E+E+DD + Sbjct: 4567 EEEEEEEEEEEDENDDSK 4620 >U72936 Human putative DNA dependent ATPase and helicase (ATRX) mRNA, Length = 10,448 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +1 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K V+ + S + K E+EE+E++E Sbjct: 4519 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4686 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+EEED++D+ Sbjct: 4687 EEEEEEEEEEEEEDENDD 4740 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +1 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ +Y+ K K K + ++K EEEE EE EE+E Sbjct: 4519 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4692 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+E+E+DD + Sbjct: 4693 EEEEEEEEEEEDENDDSK 4746 >U12534 Gallus gallus Sox11 transcription factor (Sox11) mRNA, complete Length = 1977 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 0.00020, P = 0.00020 Identities = 60/197 (30%), Positives = 84/197 (42%), Frame = +1 Query: 16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75 AF V + E K ++ +E SK+ +RWK + EK F + +A++ R + M Sbjct: 526 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPF--IREAERLRL-KHMA 696 Query: 76 TYIPPKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134 Y K +KK K DP+A P+A E G S G KL Sbjct: 697 DYPDYKYRPRKKPKMDPSAK---PNAGQ--SPEKNAPGGGSKSAKSSGKKCSKL----KA 849 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 AA +P K A Y D + A K KA K EEEEDEEDE+ Sbjct: 850 AAASPPKPGAKAAPH--GDYAGDEYVF-------GALKVSSKAVKCVFVDEEEEDEEDED 1002 Query: 195 DEEEEEDEEDEDEEEDDD 212 + + +E +DEEED++ Sbjct: 1003 ELQLRIKQEADDEEEDEE 1056 Score = 108 (38.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06 Identities = 26/91 (28%), Positives = 46/91 (50%), Frame = +1 Query: 95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154 KRP +AF ++ R KI + P + +++K+LG+ W +K P+ ++A +L+ K+ Sbjct: 511 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 690 Query: 155 EKDIA--AYRAKGKPDAAKKGVVKAEKSKKK 183 D YR + KP A +S +K Sbjct: 691 MADYPDYKYRPRKKPKMDPSAKPNAGQSPEK 783 Score = 79 (27.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06 Identities = 18/38 (47%), Positives = 26/38 (68%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 KA K EEEEDEEDE DE + +++ D+EE+D++ Sbjct: 946 KAVKCVFVDEEEEDEEDE-DELQLRIKQEADDEEEDEE 1056 >M60858;J05584 Human nucleolin gene, complete cds. Length = 10,942 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 27/65 (41%), Positives = 48/65 (73%), Frame = +2 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 L + E+ + AKGK AAK VKA+ + ++EEED+EDE+D+++E+DE+D+DE++ Sbjct: 4580 LSDSEEEAMETTPAKGKK-AAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 4756 Query: 210 DDDDE 214 ++++E Sbjct: 4757 EEEEE 4771 Score = 136 (47.9 bits), Expect = 8.6e-06, P = 8.6e-06 Identities = 29/67 (43%), Positives = 48/67 (71%), Frame = +2 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE-- 207 L + E+ + AKGK AAK VKA+ + ++EEED+EDE+D+++E+DE+D+DE Sbjct: 4580 LSDSEEEAMETTPAKGKK-AAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 4756 Query: 208 -EEDDDDE 214 EE++++E Sbjct: 4757 EEEEEEEE 4780 Score = 118 (41.5 bits), Expect = 0.0013, P = 0.0013 Identities = 24/46 (52%), Positives = 34/46 (73%), Frame = +1 Query: 171 KKGVV---KAEKSKK--KKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 KKG K K+ K KKE+ ++EED++ EE+EED+EDEDE+ED+ Sbjct: 3673 KKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDE 3810 Score = 116 (40.8 bits), Expect = 0.0022, P = 0.0022 Identities = 21/46 (45%), Positives = 33/46 (71%), Frame = +1 Query: 171 KKGVVKAEKSKK--KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKG K K K ++ED ++EED++ EEDEED+++E++D+DE Sbjct: 3673 KKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDE 3810 Score = 94 (33.1 bits), Expect = 0.74, P = 0.52 Identities = 27/91 (29%), Positives = 45/91 (49%), Frame = +1 Query: 117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176 PG + K + N +D E ++ E+ ++D + +P AA K Sbjct: 3667 PGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEP-AAMKAAAA 3843 Query: 177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 A S E+E+DE+DE+DE++++DEED E Sbjct: 3844 APAS----EDEDDEDDEDDEDDDDDEEDGKE 3924 Score = 92 (32.4 bits), Expect = 1.2, P = 0.71 Identities = 26/81 (32%), Positives = 48/81 (59%), Frame = +1 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE----------- 193 KK A + K K+ AK K D+ ++ +E+ ++ E+E+++EDE Sbjct: 3673 KKGAAIPAKGAKN--GKNAK-KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAA 3843 Query: 194 ----EDEEEEEDEEDEDEEEDDDD 213 EDE++E+DE+DED+++D++D Sbjct: 3844 APASEDEDDEDDEDDEDDDDDEED 3915 >AF000299 Caenorhabditis elegans cosmid E03H12. Length = 19,216 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 34/78 (43%), Positives = 52/78 (66%), Frame = +1 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 AD+K+ EKK K EK KD K K +KK K++KSKK K E++DE+ +ED+ Sbjct: 1450 ADEKKDEEKKDDKKDEK--KDEKKDEKKEKSKKSKKSS-KSKKSKKSKREKKDEDKKEDD 1620 Query: 197 EEEEDEEDEDEEEDD-DDE 214 ++E+D++D+ +E+D DDE Sbjct: 1621 KKEDDKKDDKKEDDKKDDE 1677 Score = 137 (48.2 bits), Expect = 6.7e-06, P = 6.7e-06 Identities = 33/76 (43%), Positives = 52/76 (68%), Frame = +1 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 AD+K+ EKK K EK KD K K +KK K++KSKK K E++DE+ +ED+ Sbjct: 1450 ADEKKDEEKKDDKKDEK--KDEKKDEKKEKSKKSKKSS-KSKKSKKSKREKKDEDKKEDD 1620 Query: 197 EEEEDEED---EDEEEDDD 212 ++E+D++D ED+++DD+ Sbjct: 1621 KKEDDKKDDKKEDDKKDDE 1677 Score = 123 (43.3 bits), Expect = 0.00034, P = 0.00034 Identities = 28/93 (30%), Positives = 55/93 (59%), Frame = +1 Query: 123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSK 181 D KK + + +DK+ +K A + K++ +KD K K D K+ K++KS Sbjct: 1378 DGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSS 1557 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K K+ ++ + +++DE+++ED++ ED+++DD E Sbjct: 1558 KSKKSKKSKREKKDEDKKEDDKKEDDKKDDKKE 1656 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011 Identities = 37/146 (25%), Positives = 68/146 (46%), Frame = +1 Query: 69 RYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKL 128 +Y K+ P K P AP PP+A P+ P A Sbjct: 1144 QYFSSTKSLFRPPKSASKMGPPPPAPA-PPTA---------PEATPAAPAPDAAAAAPAE 1293 Query: 129 GEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188 GE + +K+ +KK + K++ +KD K + KK +K + KK+E++ Sbjct: 1294 GEKKDGDKKSEKKDGDKKEEEKKDEEKKD------GDKKEDDKKD---EKKDEDKKDEKK 1446 Query: 189 DEEDEEDEEEEEDEEDEDEEEDDDDE 214 D ++++DEE+++D++DE ++E D++ Sbjct: 1447 DADEKKDEEKKDDKKDEKKDEKKDEK 1524 Score = 107 (37.7 bits), Expect = 0.025, P = 0.024 Identities = 37/132 (28%), Positives = 63/132 (47%), Frame = +1 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138 PPK +K P AP PP+A P+ P A GE + Sbjct: 1177 PPKSASKMG-PPPPAPA-PPTA---------PEATPAAPAPDAAAAAPAEGEKKDGDKKS 1323 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 +K+ +KK + K++ +KD + K D K K EK K +E++DEE ++D+++ Sbjct: 1324 EKKDGDKKEEEKKDEEKKD-GDKKEDDKKDEKKDEDKKDEK--KDADEKKDEEKKDDKKD 1494 Query: 199 EEDEEDEDEEED 210 E+ +E +DE+++ Sbjct: 1495 EKKDEKKDEKKE 1530 >X78993 S.cerevisiae genomic DNA 70kb region of the right arm of chromosome II. Length = 69,748 Minus Strand HSPs: Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 33/97 (34%), Positives = 52/97 (53%), Frame = -3 Query: 69 RYEREMKTYIPPKGETKKKFKDPNAPKRP---PSAFFLFCSEYRPKIKGEHPGLSIGDVA 125 RY R ++ KG ++ ++ RP SA+ F +E R ++ E+P ++ G V Sbjct: 6719 RYGRN*RSKAT-KGTKEEDHQEKEGS*RP*ERLSAYMFFANENRDIVRSENPDVTFGQVG 6543 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163 + LGE W A++KQPYE KA K++YE + Y A Sbjct: 6542 RILGERWKALTAEEKQPYESKAQADKKRYESEKELYNA 6429 Score = 136 (47.9 bits), Expect = 9.0e-06, P = 9.0e-06 Identities = 27/71 (38%), Positives = 43/71 (60%), Frame = -3 Query: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66 +P ++S+Y FF R+ + ++PD V F + + ERWK ++A+EK +E A+AD Sbjct: 6641 RP*ERLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYESKAQAD 6468 Query: 67 KARYEREMKTY 77 K RYE E + Y Sbjct: 6467 KKRYESEKELY 6435 Score = 45 (15.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06 Identities = 11/36 (30%), Positives = 17/36 (47%), Frame = -3 Query: 39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 74 E +K +E W M + K KF + K + R E+ Sbjct: 55757 EPGQKLNEEWDRMFEEYKTKFPEKGKELQRRLNGEL 55650 >Z73514;U00094 S.cerevisiae chromosome XVI reading frame ORF YPL158c Length = 3145 Minus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.2e-06, P = 1.2e-06 Identities = 31/76 (40%), Positives = 50/76 (65%), Frame = -3 Query: 143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196 Y K+A+ +D+ Y A G GV V+A++ +++E+E+DE+DEE+E Sbjct: 815 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADE--EEEEDEDDEDDEEEE 642 Query: 197 EEEEDEEDEDEEEDDDDE 214 EE +DEEDE++EEDD+D+ Sbjct: 641 EENDDEEDEEDEEDDEDD 588 Score = 137 (48.2 bits), Expect = 5.7e-06, P = 5.7e-06 Identities = 29/79 (36%), Positives = 51/79 (64%), Frame = -3 Query: 143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196 Y K+A+ +D+ Y A G GV V+A++ +++ E++ED+E+EE+E Sbjct: 815 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEE 636 Query: 197 -EEEEDEEDEDEEEDDDDE 214 ++EEDEEDE+++EDD++E Sbjct: 635 NDDEEDEEDEEDDEDDEEE 579 Score = 127 (44.7 bits), Expect = 9.7e-05, P = 9.7e-05 Identities = 30/83 (36%), Positives = 47/83 (56%), Frame = -3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 N +A + YE L +YE D ++ + G A + + E + +EEEE+ + Sbjct: 809 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 630 Query: 192 DEEDEEEEEDEEDEDEEEDDDDE 214 DEEDEE+EED+ED++EEE+ E Sbjct: 629 DEEDEEDEEDDEDDEEEEEKRKE 561 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020 Identities = 29/85 (34%), Positives = 48/85 (56%), Frame = -3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 N +A + YE L +YE D ++ + G A + + E + +EEEE+ + Sbjct: 809 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 630 Query: 192 DEEDEEEEEDEEDEDEEED---DDD 213 DEEDEE+EED+ED++EEE+ + + Sbjct: 629 DEEDEEDEEDDEDDEEEEEKRKEGE 555 Score = 93 (32.7 bits), Expect = 0.86, P = 0.58 Identities = 27/85 (31%), Positives = 46/85 (54%), Frame = -3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KG---KPDAAKKGVVKAEKSKKKKEEEE 188 N +A + YE L +YE D ++ + G + D ++ E ++++EE + Sbjct: 809 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 630 Query: 189 DEEDEEDEEEEEDEEDEDE------ 207 DEEDEEDEE++ED+E+E+E Sbjct: 629 DEEDEEDEEDDEDDEEEEEKRKEGE 555 >L40039 Gallus gallus GAA microsatellite region. Length = 373 Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 1.2e-06, P = 1.2e-06 Identities = 22/31 (70%), Positives = 30/31 (96%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 +K KKK+EEEE+EE+EE+EEEEE+EE+E+EE Sbjct: 190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE 282 Score = 123 (43.3 bits), Expect = 2.8e-06, P = 2.8e-06 Identities = 22/31 (70%), Positives = 29/31 (93%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + KKKK EEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE 282 Score = 120 (42.2 bits), Expect = 6.4e-06, P = 6.4e-06 Identities = 21/30 (70%), Positives = 29/30 (96%), Frame = +1 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KKKK+ EE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 193 KKKKKREEEEEEEEEEEEEEEEEEEEEEEE 282 Score = 111 (39.1 bits), Expect = 7.1e-05, P = 7.1e-05 Identities = 22/35 (62%), Positives = 30/35 (85%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 +K KKK+EEEE+EE+EE+EEEEE+EE+E+EE Sbjct: 190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE---- 282 Score = 109 (38.4 bits), Expect = 0.00012, P = 0.00012 Identities = 22/36 (61%), Positives = 30/36 (83%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 +K KKK+EEEE+EE+EE+EEEEE+EE+E+EE Sbjct: 190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE----- 282 Score = 108 (38.0 bits), Expect = 0.00016, P = 0.00016 Identities = 22/34 (64%), Positives = 29/34 (85%), Frame = +1 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKKK+ EE+EE+EE+EEEEE+EE+E+EEE E Sbjct: 193 KKKKKREEEEEEEEEEEEEEEEEEEEEEE----E 282 >AJ000496 Rattus norvegicus mRNA for cyclic nucleotide-gated cation channel Length = 4238 Plus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 29/78 (37%), Positives = 54/78 (69%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++K+ EKK K +EK EK+ + K + +K + ++ K++KEE+E++E+EE E Sbjct: 1253 EEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKEEKEEKEEEEKE 1432 Query: 197 EEEEDEEDEDEEEDDDDE 214 E+EE+E++E EEE++++E Sbjct: 1433 EKEEEEKEEKEEEEEEEE 1486 Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 30/80 (37%), Positives = 54/80 (67%), Frame = +2 Query: 138 DDKQPYEKKAAK---LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 ++K+ EKK K KEK E++ K + + ++ K EK +K+++EE++EE++E Sbjct: 1253 EEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKEEKEEKEEEEKE 1432 Query: 195 DEEEEEDEEDEDEEEDDDDE 214 ++EEEE EE E+EEE++++E Sbjct: 1433 EKEEEEKEEKEEEEEEEEEE 1492 Score = 138 (48.6 bits), Expect = 4.3e-06, P = 4.3e-06 Identities = 31/72 (43%), Positives = 49/72 (68%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 + K+ E++ + +EK EK+ +GK + +K K EK +++KEE+E+EE EE EE Sbjct: 1295 EKKEKEEEENGEEEEKEEKE-EKEEEEGKEEKEEKEE-KEEKEEEEKEEKEEEEKEEKEE 1468 Query: 198 EEEDEEDEDEEE 209 EEE+EE+E+EEE Sbjct: 1469 EEEEEEEEEEEE 1504 Score = 136 (47.9 bits), Expect = 7.9e-06, P = 7.9e-06 Identities = 32/83 (38%), Positives = 56/83 (67%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKK----GVV-KAEKSKKKKEEEEDEE 191 ++K+ EKK K +EK EK+ + K + +K G K EK +K+++EEE++E Sbjct: 1253 EEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKEEKEEKEEEEKE 1432 Query: 192 DEEDEEEEEDEEDEDEEEDDDDE 214 ++E+EE+EE EE+E+EEE++++E Sbjct: 1433 EKEEEEKEEKEEEEEEEEEEEEE 1501 Score = 130 (45.8 bits), Expect = 4.4e-05, P = 4.4e-05 Identities = 24/77 (31%), Positives = 52/77 (67%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E+K + K + EK K + + + G + ++ K++KEEEE +E++E++E Sbjct: 1220 EEKEEEEEKEEEEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKE 1399 Query: 198 EEEDEEDEDEEEDDDDE 214 E+E++E+E++EE +++E Sbjct: 1400 EKEEKEEEEKEEKEEEE 1450 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014 Identities = 29/77 (37%), Positives = 50/77 (64%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E++ + +EK E++ K + + KK + E+ KK+KEEEE+ E+EE EE Sbjct: 1181 EEKEEEEEEKEEKEEKEEEEEKEEEEK-REEEKKK---EKEEEKKEKEEEENGEEEEKEE 1348 Query: 198 EEEDEEDEDEEEDDDDE 214 +EE EE+E +EE ++ E Sbjct: 1349 KEEKEEEEGKEEKEEKE 1399 Score = 124 (43.7 bits), Expect = 0.00023, P = 0.00023 Identities = 24/71 (33%), Positives = 48/71 (67%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E+K + +EK EK+ + + + ++ K EK ++KKE+EE+E EE+E+EE++E+ Sbjct: 1181 EEKEEEEEEKEEKEEKEEEEEKEEEEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEK 1360 Query: 204 DEDEEEDDDDE 214 +E+E +++ +E Sbjct: 1361 EEEEGKEEKEE 1393 Score = 116 (40.8 bits), Expect = 0.0021, P = 0.0021 Identities = 27/92 (29%), Positives = 54/92 (58%), Frame = +2 Query: 123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 D ++ + EM +Q E+ K +E+ EK+ + K + +K + + +K Sbjct: 1109 DESEAMVEMPRELPQIQEQQEEENEEKEEEEEEKE----EKEEKEEEEEKEEEEKREEEK 1276 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KKE+EE+++++E+EE E+EE E++EE +++E Sbjct: 1277 KKEKEEEKKEKEEEENGEEEEKEEKEEKEEEE 1372 Score = 107 (37.7 bits), Expect = 0.023, P = 0.022 Identities = 20/49 (40%), Positives = 36/49 (73%), Frame = +2 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 + +P+ A + + + +++KEEE+ EE+EE EEEEE EE+E++EE+ + Sbjct: 1568 RAQPETAS--IQELPEEEEEKEEEKKEEEEEKEEEEEKEEEEEKEEEGE 1708 Score = 104 (36.6 bits), Expect = 0.051, P = 0.050 Identities = 18/30 (60%), Positives = 28/30 (93%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 EK ++KKEEEE++E+EE++EEEE++E+E E Sbjct: 1619 EKEEEKKEEEEEKEEEEEKEEEEEKEEEGE 1708 Score = 101 (35.6 bits), Expect = 0.11, P = 0.11 Identities = 16/33 (48%), Positives = 31/33 (93%), Frame = +2 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++++EEE+EE EE+EEE+E++E+++EEE+ ++E Sbjct: 1157 QEQQEEENEEKEEEEEEKEEKEEKEEEEEKEEE 1255 Score = 100 (35.2 bits), Expect = 0.14, P = 0.13 Identities = 17/31 (54%), Positives = 28/31 (90%), Frame = +2 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +EEEE EE++++EEEE++EE+E EEE++ +E Sbjct: 1607 EEEEEKEEEKKEEEEEKEEEEEKEEEEEKEE 1699 Score = 99 (34.8 bits), Expect = 0.19, P = 0.17 Identities = 17/30 (56%), Positives = 27/30 (90%), Frame = +2 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEEE++E+E+ EEEEE EE+E++EE+++ E Sbjct: 1607 EEEEEKEEEKKEEEEEKEEEEEKEEEEEKE 1696 Score = 99 (34.8 bits), Expect = 0.19, P = 0.17 Identities = 17/46 (36%), Positives = 34/46 (73%), Frame = +2 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 + A+ ++ +++EE+E+E+ EE+EE+EE+EE E+EEE +++ Sbjct: 1565 ERAQPETASIQELPEEEEEKEEEKKEEEEEKEEEEEKEEEEEKEEE 1702 >X17093 Human HLA-F gene for human leukocyte antigen F Length = 4316 Plus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 26/63 (41%), Positives = 45/63 (71%), Frame = +2 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 EK + R + K +G + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 80 EKKRRGAGRSRRRRKEGGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 259 Query: 212 DDE 214 ++E Sbjct: 260 EEE 268 Score = 133 (46.8 bits), Expect = 1.9e-05, P = 1.9e-05 Identities = 22/51 (43%), Positives = 43/51 (84%), Frame = +2 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +G+ + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 140 EGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 292 Score = 132 (46.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 22/50 (44%), Positives = 42/50 (84%), Frame = +2 Query: 165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 G+ + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 131 GEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 280 Score = 132 (46.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 22/51 (43%), Positives = 43/51 (84%), Frame = +2 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +G+ + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 134 EGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 286 Score = 132 (46.5 bits), Expect = 2.6e-05, P = 2.6e-05 Identities = 23/53 (43%), Positives = 42/53 (79%), Frame = +2 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 R +G ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 119 RKEGGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 277 Score = 129 (45.4 bits), Expect = 5.9e-05, P = 5.9e-05 Identities = 27/74 (36%), Positives = 52/74 (70%), Frame = +2 Query: 151 KEKYEKD--IAAYRAKGK--PDAAKKGVVKAEKSKKK------KEEEEDEEDEEDEEEEE 200 K+K E++ ++ + G P+ ++G ++ + +K+ +EEEE+EE+EE+EEEEE Sbjct: 17 KKKKERNWSLSYFICSGTTFPEKKRRGAGRSRRRRKEGGEGEGEEEEEEEEEEEEEEEEE 196 Query: 201 DEEDEDEEEDDDDE 214 +EE+E+EEE++++E Sbjct: 197 EEEEEEEEEEEEEE 238 Score = 117 (41.2 bits), Expect = 0.0016, P = 0.0016 Identities = 20/32 (62%), Positives = 31/32 (96%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 197 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 292 >J05138 Rabbit calcium binding protein (calreticulin) mRNA, complete cds. Length = 1865 Plus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 36/97 (37%), Positives = 58/97 (59%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1003 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTKT-AEKQMKDKQDEEQR-LKEE 1170 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ KK+KEEEE EEDEED++++EDE DEDEE+ D++E Sbjct: 1171 EEEKKRKEEEEAEEDEEDKDDKEDE-DEDEEDKDEEE 1278 Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 37/94 (39%), Positives = 57/94 (60%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1003 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTKT-AEKQMKDKQDEEQR-LKEE 1170 Query: 178 EKSKKKKEEEEDEEDEED----EEEEEDEEDEDEEEDD 211 E+ KK+KEEEE EEDEED E+E+EDEED+DEEE++ Sbjct: 1171 EEEKKRKEEEEAEEDEEDKDDKEDEDEDEEDKDEEEEE 1284 Score = 116 (40.8 bits), Expect = 0.0017, P = 0.0017 Identities = 38/103 (36%), Positives = 57/103 (55%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1003 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTKT-AEKQMKDKQDEEQR-LKEE 1170 Query: 178 EKSKKKKEEEEDEEDEED----EEEEEDEEDEDEEE---------DD 211 E+ KK+KEEEE EEDEED E+E+EDEED+DEEE D+ Sbjct: 1171 EEEKKRKEEEEAEEDEEDKDDKEDEDEDEEDKDEEEEEAAAGQAKDE 1311 >M32294 Human Ro ribonucleoprotein autoantigen (Ro/SS-A), complete cds. Length = 1890 Plus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 33/97 (34%), Positives = 59/97 (60%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ KK+KEEEE E+ E+DE+++EDEEDE+++E+D++E Sbjct: 1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 1287 Score = 132 (46.5 bits), Expect = 2.1e-05, P = 2.1e-05 Identities = 35/95 (36%), Positives = 59/95 (62%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176 Query: 178 EKSKKKKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+ED+ED +E+EEDEED++E+E++D Sbjct: 1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 1290 Score = 111 (39.1 bits), Expect = 0.0067, P = 0.0067 Identities = 32/90 (35%), Positives = 53/90 (58%), Frame = +1 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1081 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1218 Query: 184 KEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214 KE++ED +EDEEDEE++E++E+ED DE Sbjct: 1219 KEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDE 1314 >I09500 Sequence 4 from patent WO 8909273. Length = 1890 Plus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 33/97 (34%), Positives = 59/97 (60%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ KK+KEEEE E+ E+DE+++EDEEDE+++E+D++E Sbjct: 1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 1287 Score = 132 (46.5 bits), Expect = 2.1e-05, P = 2.1e-05 Identities = 35/95 (36%), Positives = 59/95 (62%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176 Query: 178 EKSKKKKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+ED+ED +E+EEDEED++E+E++D Sbjct: 1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 1290 Score = 111 (39.1 bits), Expect = 0.0067, P = 0.0067 Identities = 32/90 (35%), Positives = 53/90 (58%), Frame = +1 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1081 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1218 Query: 184 KEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214 KE++ED +EDEEDEE++E++E+ED DE Sbjct: 1219 KEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDE 1314 >M84739 Human autoantigen calreticulin mRNA, complete cds. Length = 1958 Plus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06 Identities = 33/97 (34%), Positives = 59/97 (60%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1051 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1218 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ KK+KEEEE E+ E+DE+++EDEEDE+++E+D++E Sbjct: 1219 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 1329 Score = 132 (46.5 bits), Expect = 2.1e-05, P = 2.1e-05 Identities = 35/95 (36%), Positives = 59/95 (62%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1051 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1218 Query: 178 EKSKKKKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+ED+ED +E+EEDEED++E+E++D Sbjct: 1219 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 1332 Score = 111 (39.1 bits), Expect = 0.0068, P = 0.0068 Identities = 32/90 (35%), Positives = 53/90 (58%), Frame = +1 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1123 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1260 Query: 184 KEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214 KE++ED +EDEEDEE++E++E+ED DE Sbjct: 1261 KEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDE 1356 >Y13901 Homo sapiens FGFR-4 gene Length = 13,095 Minus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +EK E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11465 EEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11286 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11285 EEEEEEEEEEEEEEEEE 11235 Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E+K + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11444 EEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11265 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11264 EEEEEEEEEEEEEEEEE 11214 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ EK+ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11474 EEEEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11295 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11294 EEEEEEEEEEEEEEEEE 11244 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + KE+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11459 EEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11280 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11279 EEEEEEEEEEEEEEEEE 11229 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ K +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11453 EEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11274 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11273 EEEEEEEEEEEEEEEEE 11223 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ EK+ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11441 EEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11262 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11261 EEEEEEEEEEEEEEEEE 11211 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11426 EEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11247 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11246 EEEEEEEEEEEEEEEEE 11196 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11309 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11130 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++DE Sbjct: 11129 EEEEEEEEEEEEEEEDE 11079 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11306 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11127 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++D+E Sbjct: 11126 EEEEEEEEEEEEEEDEE 11076 Score = 140 (49.3 bits), Expect = 2.7e-06, P = 2.7e-06 Identities = 25/79 (31%), Positives = 57/79 (72%), Frame = -2 Query: 136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED 195 A ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+ Sbjct: 11489 AEEEEEEEEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11310 Query: 196 EEEEEDEEDEDEEEDDDDE 214 EEEEE+EE+E+EEE++++E Sbjct: 11309 EEEEEEEEEEEEEEEEEEE 11253 Score = 138 (48.6 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11456 EEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11277 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11276 EEEEEEEEEEEEEEEEE 11226 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11468 EEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11289 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11288 EEEEEEEEEEEEEEEEE 11238 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11450 EEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11271 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11270 EEEEEEEEEEEEEEEEE 11220 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11435 EEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11256 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11255 EEEEEEEEEEEEEEEEE 11205 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11417 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11238 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11237 EEEEEEEEEEEEEEEEE 11187 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11414 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11235 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11234 EEEEEEEEEEEEEEEEE 11184 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11411 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11232 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11231 EEEEEEEEEEEEEEEEE 11181 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11408 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11229 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11228 EEEEEEEEEEEEEEEEE 11178 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11405 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11226 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11225 EEEEEEEEEEEEEEEEE 11175 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11402 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11223 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11222 EEEEEEEEEEEEEEEEE 11172 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11399 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11220 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11219 EEEEEEEEEEEEEEEEE 11169 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11396 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11217 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11216 EEEEEEEEEEEEEEEEE 11166 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11393 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11214 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11213 EEEEEEEEEEEEEEEEE 11163 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11390 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11211 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11210 EEEEEEEEEEEEEEEEE 11160 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11387 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11208 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11207 EEEEEEEEEEEEEEEEE 11157 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11384 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11205 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11204 EEEEEEEEEEEEEEEEE 11154 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11381 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11202 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11201 EEEEEEEEEEEEEEEEE 11151 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11378 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11199 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11198 EEEEEEEEEEEEEEEEE 11148 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11375 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11196 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11195 EEEEEEEEEEEEEEEEE 11145 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11372 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11193 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11192 EEEEEEEEEEEEEEEEE 11142 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11369 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11190 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11189 EEEEEEEEEEEEEEEEE 11139 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11366 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11187 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11186 EEEEEEEEEEEEEEEEE 11136 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11363 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11184 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11183 EEEEEEEEEEEEEEEEE 11133 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11360 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11181 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11180 EEEEEEEEEEEEEEEEE 11130 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11357 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11178 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11177 EEEEEEEEEEEEEEEEE 11127 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11354 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11175 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11174 EEEEEEEEEEEEEEEEE 11124 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11351 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11172 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11171 EEEEEEEEEEEEEEEEE 11121 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11348 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11169 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11168 EEEEEEEEEEEEEEEEE 11118 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11345 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11166 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11165 EEEEEEEEEEEEEEEEE 11115 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11342 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11163 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11162 EEEEEEEEEEEEEEEEE 11112 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11339 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11160 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11159 EEEEEEEEEEEEEEEEE 11109 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11336 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11157 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11156 EEEEEEEEEEEEEEEEE 11106 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11333 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11154 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11153 EEEEEEEEEEEEEEEEE 11103 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11330 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11151 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11150 EEEEEEEEEEEEEEEEE 11100 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11327 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11148 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11147 EEEEEEEEEEEEEEEEE 11097 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11324 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11145 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11144 EEEEEEEEEEEEEEEEE 11094 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11321 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11142 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11141 EEEEEEEEEEEEEEEEE 11091 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11318 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11139 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11138 EEEEEEEEEEEEEEEEE 11088 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11315 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11136 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11135 EEEEEEEEEEEEEEEEE 11085 Score = 136 (47.9 bits), Expect = 8.7e-06, P = 8.7e-06 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E+K + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11444 EEEEEQEEKEEEEEEEEEEE-EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11268 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11267 EEEEEEEEEEEEEEEEE 11217 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ EK+ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11474 EEEEEEEEEEEEEEEQEEKE-EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11298 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11297 EEEEEEEEEEEEEEEEE 11247 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 + ++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11432 EQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11253 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11252 EEEEEEEEEEEEEEEEE 11202 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ EK+ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11474 EEEEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEE--EEEEEEEEEEEEEEEEEEEEEE 11301 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11300 EEEEEEEEEEEEEEEEE 11250 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 + ++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11423 EKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11244 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE++++E Sbjct: 11243 EEEEEEEEEEEEEEEEE 11193 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = -2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ E++ + +E+ E++ + + + ++ + E+ ++++EEEE+EE+EE+EE Sbjct: 11312 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11133 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+E+EEE+++++ Sbjct: 11132 EEEEEEEEEEEEEEEED 11082 Score = 118 (41.5 bits), Expect = 0.0013, P = 0.0013 Identities = 20/33 (60%), Positives = 31/33 (93%), Frame = -2 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +++EEEE+EE+EE+EEEEE EE E+EEE++++E Sbjct: 11486 EEEEEEEEEEEEEEEEEEEQEEKEEEEEEEEEE 11388 >M57718;M33937 Rat cytochrome P-450 IV A1 (CYP4A1) gene, complete cds. Length = 16,299 Minus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 28/60 (46%), Positives = 45/60 (75%), Frame = -3 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 Y K + AY K + ++G K ++ KKKK +E+DEE+EE+EEEEE+EE+E+EEE++++ Sbjct: 3985 YVKLVDAYTE*VKREIEERGDYK-QRRKKKKGDEDDEEEEEEEEEEEEEEEEEEEEEEEE 3809 Score = 115 (40.5 bits), Expect = 0.0030, P = 0.0030 Identities = 20/30 (66%), Positives = 29/30 (96%), Frame = -1 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEEE+EE+EE+EEEEE+EE+E+EEE+++ E Sbjct: 7338 EEEEEEEEEEEEEEEEEEEEEEEEEEEEVE 7249 Score = 111 (39.1 bits), Expect = 0.0086, P = 0.0085 Identities = 19/28 (67%), Positives = 28/28 (100%), Frame = -1 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEED 210 ++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 7338 EEEEEEEEEEEEEEEEEEEEEEEEEEEE 7255 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011 Identities = 19/28 (67%), Positives = 28/28 (100%), Frame = -1 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 +++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 7338 EEEEEEEEEEEEEEEEEEEEEEEEEEEE 7255 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = -1 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 S++++EEEE+EE+EE+EEEEE+EE+E+EE Sbjct: 7341 SEEEEEEEEEEEEEEEEEEEEEEEEEEEE 7255 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011 Identities = 20/42 (47%), Positives = 34/42 (80%), Frame = -1 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 P+ +V +E+ ++++EEEE+EE+EE+EEEEE+EE+E E+ Sbjct: 7371 PNGLDIALVISEEEEEEEEEEEEEEEEEEEEEEEEEEEEVEQ 7246 Score = 106 (37.3 bits), Expect = 0.032, P = 0.032 Identities = 20/31 (64%), Positives = 30/31 (96%), Frame = -1 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEE-E 209 S++++EEEE+EE+EE+EEEEE+EE+E+EE E Sbjct: 7341 SEEEEEEEEEEEEEEEEEEEEEEEEEEEEVE 7249 >X96770 S.cerevisiae chromosome XVI, left arm DNA Length = 55,786 Minus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 31/76 (40%), Positives = 50/76 (65%), Frame = -1 Query: 143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196 Y K+A+ +D+ Y A G GV V+A++ +++E+E+DE+DEE+E Sbjct: 25654 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADE--EEEEDEDDEDDEEEE 25481 Query: 197 EEEEDEEDEDEEEDDDDE 214 EE +DEEDE++EEDD+D+ Sbjct: 25480 EENDDEEDEEDEEDDEDD 25427 Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06 Identities = 29/79 (36%), Positives = 51/79 (64%), Frame = -1 Query: 143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196 Y K+A+ +D+ Y A G GV V+A++ +++ E++ED+E+EE+E Sbjct: 25654 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEE 25475 Query: 197 -EEEEDEEDEDEEEDDDDE 214 ++EEDEEDE+++EDD++E Sbjct: 25474 NDDEEDEEDEEDDEDDEEE 25418 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 30/83 (36%), Positives = 47/83 (56%), Frame = -1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 N +A + YE L +YE D ++ + G A + + E + +EEEE+ + Sbjct: 25648 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 25469 Query: 192 DEEDEEEEEDEEDEDEEEDDDDE 214 DEEDEE+EED+ED++EEE+ E Sbjct: 25468 DEEDEEDEEDDEDDEEEEEKRKE 25400 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023 Identities = 29/85 (34%), Positives = 48/85 (56%), Frame = -1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 N +A + YE L +YE D ++ + G A + + E + +EEEE+ + Sbjct: 25648 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 25469 Query: 192 DEEDEEEEEDEEDEDEEED---DDD 213 DEEDEE+EED+ED++EEE+ + + Sbjct: 25468 DEEDEEDEEDDEDDEEEEEKRKEGE 25394 Score = 93 (32.7 bits), Expect = 0.98, P = 0.62 Identities = 27/85 (31%), Positives = 46/85 (54%), Frame = -1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KG---KPDAAKKGVVKAEKSKKKKEEEE 188 N +A + YE L +YE D ++ + G + D ++ E ++++EE + Sbjct: 25648 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 25469 Query: 189 DEEDEEDEEEEEDEEDEDE------ 207 DEEDEEDEE++ED+E+E+E Sbjct: 25468 DEEDEEDEEDDEDDEEEEEKRKEGE 25394 Score = 40 (14.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05 Identities = 7/24 (29%), Positives = 11/24 (45%), Frame = -1 Query: 8 PRGKMSSYAFFVQTCREEHKKKHP 31 P + A+ + C H +KHP Sbjct: 28360 PLHRRKEIAWQIVWCSRPHHRKHP 28289 >AF005370 Alcelaphine herpesvirus 1 L-DNA, complete sequence. Length = 130,608 Minus Strand HSPs: Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 25/45 (55%), Positives = 37/45 (82%), Frame = -2 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 A +GV + S K ++EE+EE+EE+EEEEE+E+DE+EEEDD++E Sbjct: 117863 ALEGVCGSHSSSKDSDDEEEEEEEEEEEEEEEEDDEEEEEDDEEE 117729 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+E+DEE+EE++E+EE++DEEE++DDE Sbjct: 117803 EEEEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDE 117693 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEED+E+EE+++EEE+E+DE+EEEDD++E Sbjct: 117797 EEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEE 117687 Score = 133 (46.8 bits), Expect = 2.1e-05, P = 2.1e-05 Identities = 25/52 (48%), Positives = 41/52 (78%), Frame = -2 Query: 165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEEEDDDDE 214 G ++K + E+ ++++EEEE+EED+E+EEE EE+EED++EEE+DD+E Sbjct: 117845 GSHSSSKDSDDEEEEEEEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDEE 117690 Score = 130 (45.8 bits), Expect = 5.0e-05, P = 5.0e-05 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ + +EEEED+E+EE+++EEE+E+DE+EEEDD++E Sbjct: 117776 EEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEE 117666 Score = 130 (45.8 bits), Expect = 5.0e-05, P = 5.0e-05 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ + +EEEED+E+EE+++EEE+E+DE+EEEDD++E Sbjct: 117755 EEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEE 117645 Score = 129 (45.4 bits), Expect = 6.7e-05, P = 6.7e-05 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ +++ +EEE+E+DEE+EE++E+EE++DEEE++DDE Sbjct: 117782 EEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDE 117672 Score = 127 (44.7 bits), Expect = 0.00012, P = 0.00012 Identities = 23/54 (42%), Positives = 42/54 (77%), Frame = -2 Query: 163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEEEDDDDE 214 +K D ++ + E+ ++++++EE+EED+E+EEE EE+EED++EEE+DD+E Sbjct: 117830 SKDSDDEEEEEEEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEE 117669 Score = 126 (44.4 bits), Expect = 0.00015, P = 0.00015 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ +++ +EEE+E+DEE+EE++E+EE++DEEE++DDE Sbjct: 117761 DEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDE 117651 Score = 126 (44.4 bits), Expect = 0.00015, P = 0.00015 Identities = 23/66 (34%), Positives = 46/66 (69%), Frame = -3 Query: 149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 K KEK EKD+ AK + ++ K EK +K+++EE++E++ ++ +EE++E++E EE Sbjct: 117562 KAKEKKEKDVKKMEAKEAKEEKEEKEEKEEKEEKEEKEEKEEKEAKEAKEEKEEKEEKEE 117383 Query: 209 EDDDDE 214 +++ +E Sbjct: 117382 KEEKEE 117365 Score = 124 (43.7 bits), Expect = 0.00026, P = 0.00026 Identities = 32/76 (42%), Positives = 50/76 (65%), Frame = -3 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEE-EEDEEDEEDEE 197 D + E K AK +EK EK+ + + K + +K +A+++K++KEE EE EE EE EE Sbjct: 117538 DVKKMEAKEAK-EEKEEKEEKEEKEE-KEEKEEKEEKEAKEAKEEKEEKEEKEEKEEKEE 117365 Query: 198 EEEDEEDEDEEEDDDDE 214 +EE EE E++EE ++ E Sbjct: 117364 KEEKEEKEEKEEKEEKE 117314 Score = 123 (43.3 bits), Expect = 0.00035, P = 0.00035 Identities = 19/37 (51%), Positives = 34/37 (91%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++ EEEE++++EE+E++EE+EED++EEE+DD+E Sbjct: 117758 EEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEE 117648 Score = 123 (43.3 bits), Expect = 0.00035, P = 0.00035 Identities = 32/89 (35%), Positives = 52/89 (58%), Frame = -3 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KK ++ A + K+ E+K K +EK EK+ + + + AK+ + E+ ++K+E Sbjct: 117550 KKEKDVKKMEAKEAKEEKEEKEEK-EEKEEKEEKEEKEEKEAKEAKEEKEEKEEKEEKEE 117374 Query: 186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +EE EE EE EE+EE EE E +EE + E Sbjct: 117373 KEEKEEKEEKEEKEEKEEKEAKEEKEAKE 117287 Score = 121 (42.6 bits), Expect = 0.00060, P = 0.00060 Identities = 28/89 (31%), Positives = 57/89 (64%), Frame = -3 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 K + +M A ++K+ E+K K +EK EK+ K +A ++ K EK +K+++ Sbjct: 117541 KDVKKMEAKEAKEEKEEKEEKEEK-EEKEEKE--EKEEKEAKEAKEEKEEKEEKEEKEEK 117371 Query: 186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EE++E++E++E+EE++E++ EE++ +E Sbjct: 117370 EEKEEKEEKEEKEEKEEKEAKEEKEAKEE 117284 Score = 117 (41.2 bits), Expect = 0.0018, P = 0.0018 Identities = 20/39 (51%), Positives = 35/39 (89%), Frame = -2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEED--EEDEDEEEDDDDE 214 E+ +++EE+++EE+E+DEEEEED EE+ED+EE++++E Sbjct: 117749 EEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEEE 117633 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023 Identities = 25/77 (32%), Positives = 53/77 (68%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E+K K +EK EK+ A AK + + ++ K EK +K+++EE++E++E++E+ Sbjct: 117487 EEKEEKEEKEEK-EEKEEKE--AKEAKEEKEEKEEKEEKEEKEEKEEKEEKEEKEEKEEK 117317 Query: 198 EEEDEEDEDEEEDDDDE 214 E ++E++ EE++ +E Sbjct: 117316 EAKEEKEAKEEKEAKEE 117266 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070 Identities = 24/60 (40%), Positives = 43/60 (71%), Frame = -3 Query: 155 EK-DIAAYR----AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 EK D+AA AK K K+ VK ++K+ KEE+E++E++E++EE+E++E+++E+E Sbjct: 117610 EKMDVAAVMLFV*AKKKAKEKKEKDVKKMEAKEAKEEKEEKEEKEEKEEKEEKEEKEEKE 117431 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070 Identities = 24/72 (33%), Positives = 48/72 (66%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E+K K +EK EK+ + + K + K +A++ K+ KEE+E +E++E +E Sbjct: 117388 EEKEEKEEKEEK-EEKEEKEEKEEK-EAKEEKEAKEEKEAKEEKEAKEEKEAKEEKEAKE 117215 Query: 198 EEEDEEDEDEEE 209 E+E +E+++E+E Sbjct: 117214 EKEAKEEKEEKE 117179 Score = 102 (35.9 bits), Expect = 0.094, P = 0.090 Identities = 23/77 (29%), Positives = 52/77 (67%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E+K K +EK EK+ + + + AK+ +A++ K+ KEE+E +E++E +E Sbjct: 117406 EEKEEKEEKEEK-EEKEEKEEKEEKEEKEEKEAKEEK-EAKEEKEAKEEKEAKEEKEAKE 117233 Query: 198 EEEDEEDEDEEEDDDDE 214 E+E +E+++ +E+ +++ Sbjct: 117232 EKEAKEEKEAKEEKEEK 117182 Score = 98 (34.5 bits), Expect = 0.27, P = 0.24 Identities = 23/75 (30%), Positives = 49/75 (65%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++K+ E K AK +EK EK+ + K + +K + ++ K++KEE+E +E++E +E Sbjct: 117451 EEKEEKEAKEAK-EEKEEKE----EKEEKEEKEEKEEKEEKEEKEEKEEKEAKEEKEAKE 117287 Query: 198 EEEDEEDEDEEEDDD 212 E+E +E+++ +E+ + Sbjct: 117286 EKEAKEEKEAKEEKE 117242 Score = 98 (34.5 bits), Expect = 0.27, P = 0.24 Identities = 25/76 (32%), Positives = 50/76 (65%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKK-KEEEEDEEDEED 195 ++K+ E K AK +EK EK+ + K + + ++ K EK +K+ KEE+E +E++E Sbjct: 117451 EEKEEKEAKEAK-EEKEEKEEKEEKEEKEEKEEKEEKEEKEEKEEKEAKEEKEAKEEKEA 117275 Query: 196 EEEEEDEEDEDEEEDDD 212 +EE+E +E+++ +E+ + Sbjct: 117274 KEEKEAKEEKEAKEEKE 117224 Score = 91 (32.0 bits), Expect = 1.7, P = 0.81 Identities = 22/46 (47%), Positives = 29/46 (63%), Frame = -3 Query: 169 AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 A KK K EK KK E +E +E E EE+EE EE E++EE ++ E Sbjct: 117571 AKKKAKEKKEKDVKKMEAKEAKE--EKEEKEEKEEKEEKEEKEEKE 117440 Score = 47 (16.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06 Identities = 8/20 (40%), Positives = 15/20 (75%), Frame = -2 Query: 133 NNTAADDKQPYEKKAAKLKE 152 ++TA+DD+ YE+ A ++E Sbjct: 125051 SHTASDDESSYERALAAVRE 124992 >L34363 Human X-linked nuclear protein (XNP) gene, complete cds. Length = 5173 Plus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 30/78 (38%), Positives = 52/78 (66%), Frame = +3 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ Y+ K K K V+ + S + K E+EE+E++E Sbjct: 1659 SEDEQRPRTRSAK-KAELEENQRIYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 1826 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+EEED++D+ Sbjct: 1827 EEEEEEEEEEEEEDENDD 1880 Score = 136 (47.9 bits), Expect = 8.1e-06, P = 8.1e-06 Identities = 31/78 (39%), Positives = 50/78 (64%), Frame = +3 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 ++D+Q ++AK K + E++ Y+ K K K + ++K EEEE EE EE+E Sbjct: 1659 SEDEQRPRTRSAK-KAELEENQRIYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 1832 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EE+E+E+E+DD + Sbjct: 1833 EEEEEEEEEEEDENDDSK 1886 >M18837 Mouse MHC class I Q4 beta-2-microglobulin (Qb-1) gene, complete Length = 5221 Minus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 29/83 (34%), Positives = 55/83 (66%), Frame = -1 Query: 132 WNNTAADDKQPYEKKA-AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDE 190 W+ + D Q ++ +K +E+ E++ R + + + E+ ++K+EEEE+E Sbjct: 2521 WSTSEFQDSQGIQRNPISKTEEERERERERERERER---------EREREREKEEEEEEE 2369 Query: 191 EDEEDEEEEEDEEDEDEEEDDDDE 214 E+EE+EEEEE+EE+E+EEE++++E Sbjct: 2368 EEEEEEEEEEEEEEEEEEEEEEEE 2297 Score = 127 (44.7 bits), Expect = 0.00010, P = 0.00010 Identities = 26/77 (33%), Positives = 51/77 (66%), Frame = -1 Query: 132 WNNTAADDKQPYEKKA-AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDE 190 W+ + D Q ++ +K +E+ E++ R + + ++ + E+ ++++EEEE+E Sbjct: 2521 WSTSEFQDSQGIQRNPISKTEEERERERERERERERERERER---EKEEEEEEEEEEEEE 2351 Query: 191 EDEEDEEEEEDEEDEDEE 208 E+EE+EEEEE+EE+E+EE Sbjct: 2350 EEEEEEEEEEEEEEEEEE 2297 Score = 90 (31.7 bits), Expect = 2.0, P = 0.87 Identities = 42/167 (25%), Positives = 77/167 (46%), Frame = -2 Query: 28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 K++PD + F C + + T K + K +D + ADK ++ + I P + KK Sbjct: 2778 KENPDLTC--LNFPGTCGD*Y-T**YKGREK-QDHSSADKR--QKMTRNKITPSKKKKKS 2617 Query: 88 FKDPNAPKRPPSAFFLFCSEYRPK-IKGE-HPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145 ++ R P AF R G HPGL V+ + + T + + E+ Sbjct: 2616 KENKKGWARWPHAFNPSTGRQRQADF*GRGHPGLQ---VSSRTARAYRETLSQKLKKRER 2446 Query: 146 KAAKLKEKY-EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 + + +E+ E++ R K K KK K +K KKKK++++ ++ ++ Sbjct: 2445 ERERERERERERERERERRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 2296 >X63507;S42523;S42569 M.musculus HOX-3.5 gene Length = 6343 Minus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.9e-06, P = 1.9e-06 Identities = 30/54 (55%), Positives = 43/54 (79%), Frame = -1 Query: 161 YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 YR KGK K+G EK K+ +EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 2494 YR-KGK----KRGQRWWEKKKEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2348 Score = 133 (46.8 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 24/46 (52%), Positives = 39/46 (84%), Frame = -1 Query: 171 KKGVVKAEK--SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KG + ++ KKK+ EEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 2491 RKGKKRGQRWWEKKKEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2354 Score = 132 (46.5 bits), Expect = 2.7e-05, P = 2.7e-05 Identities = 24/45 (53%), Positives = 39/45 (86%), Frame = -1 Query: 171 KKGVVKAEKS-KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KG + ++ +KKKE EE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 2491 RKGKKRGQRWWEKKKEGEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2357 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018 Identities = 24/57 (42%), Positives = 40/57 (70%), Frame = -1 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 ++KY K R + + K+G E+ ++++EEEE+EE+EE+EEEEE+EE+E+E Sbjct: 2503 RKKYRK--GKKRGQRWWEKKKEG---EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2348 >U88309 Caenorhabditis elegans cosmid T23B3. Length = 32,228 Minus Strand HSPs: Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 35/79 (44%), Positives = 52/79 (65%), Frame = -2 Query: 137 ADDKQPYEKKAAKLKEKYE--KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 AD+K+ EKK K EK + KD K K +KK K++KSKK K E++DEE +E Sbjct: 18427 ADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSS-KSKKSKKSKREKKDEEKKE 18251 Query: 195 DEEEEEDEED---EDEEEDD 211 D+++E+D++D EDE++DD Sbjct: 18250 DDKKEDDKKDDKKEDEKKDD 18191 Score = 124 (43.7 bits), Expect = 0.00026, P = 0.00026 Identities = 29/78 (37%), Positives = 49/78 (62%), Frame = -2 Query: 137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 AD+K+ EKK K EK KD + K D K+ K++KS K K+ ++ + +++DE Sbjct: 18427 ADEKKDEEKKDDKKDEK--KD---EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDE 18263 Query: 197 EEEEDEEDEDEEEDDDDE 214 E++ED++ ED+++DD E Sbjct: 18262 EKKEDDKKEDDKKDDKKE 18209 Score = 118 (41.5 bits), Expect = 0.0013, P = 0.0013 Identities = 27/89 (30%), Positives = 52/89 (58%), Frame = -2 Query: 127 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKE 185 K E + D+K+ ++K + K+ +KD K K D K+ K++KS K K+ Sbjct: 18475 KKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKK 18296 Query: 186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ + +++DEE++ED++ ED+++DD E Sbjct: 18295 SKKSKREKKDEEKKEDDKKEDDKKDDKKE 18209 Score = 114 (40.1 bits), Expect = 0.0039, P = 0.0039 Identities = 39/131 (29%), Positives = 67/131 (51%), Frame = -2 Query: 79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138 PPK +K P AP PP+A + P P + G+ KK GE + Sbjct: 18700 PPKSASKMG-PPPPAPA-PPTAPEAAPAAPTPDAAAAAP--AEGE--KKDGEKKSEKKDG 18539 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198 DK+ EKK + K+ +K+ + K D KK K KK +E+++D++DE+ +E+ Sbjct: 18538 DKKEEEKKDEEKKDGDKKEDD--KKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEK 18365 Query: 199 EEDEEDEDEEE 209 +++++DE +E+ Sbjct: 18364 KDEKKDEKKEK 18332 Score = 105 (37.0 bits), Expect = 0.042, P = 0.042 Identities = 24/56 (42%), Positives = 38/56 (67%), Frame = -2 Query: 159 AAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 AA A+G K D KK K KK+EE++DEE ++ +++E+D++DE ++ED DE Sbjct: 18601 AAAPAEGEKKDGEKKSEKK--DGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDE 18437 Score = 97 (34.1 bits), Expect = 0.35, P = 0.29 Identities = 20/50 (40%), Positives = 35/50 (70%), Frame = -2 Query: 167 PDAAKKGVVKAEKSK-KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD-DE 214 PDAA + EK +KK E++D + +E+E+++E+++D D++EDD DE Sbjct: 18613 PDAAAAAPAEGEKKDGEKKSEKKDGDKKEEEKKDEEKKDGDKKEDDKKDE 18464 Score = 40 (14.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05 Identities = 7/20 (35%), Positives = 13/20 (65%), Frame = -3 Query: 1 GKGDPKKPRGKMSSYAFFVQ 20 GK + ++ RGK+ +F+Q Sbjct: 27072 GKLESEQERGKICEIKYFIQ 27013 >AF034569 Mus musculus anticoagulant protein C gene, complete cds. Length = 15,160 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06 Identities = 27/67 (40%), Positives = 46/67 (68%), Frame = +2 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 KK K K+K +K + K + ++ + + ++K+EEEE+EE+EE+EEEEE+EE+ Sbjct: 9749 KKKKKKKKKKKKKKKKKKKKRRRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEE 9928 Query: 205 EDEEEDD 211 E+EEE++ Sbjct: 9929 EEEEEEE 9949 Score = 135 (47.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06 Identities = 26/67 (38%), Positives = 46/67 (68%), Frame = +2 Query: 146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 K K K+K +K + K + ++ + + +++KEEEE+EE+EE+EEEEE+EE+E Sbjct: 9749 KKKKKKKKKKKKKKKKKKKKRRRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEE 9928 Query: 206 DEEEDDD 212 +EEE+++ Sbjct: 9929 EEEEEEE 9949 Score = 132 (46.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05 Identities = 26/71 (36%), Positives = 49/71 (69%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K K+K +K + K K ++ + + ++++ +EE+EE+EE+EEEEE+EE Sbjct: 9749 KKKKKKKKKKKKKK----KKKKKKRRRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEE 9916 Query: 204 DEDEEEDDDDE 214 +E+EEE++++E Sbjct: 9917 EEEEEEEEEEE 9949 Score = 91 (32.0 bits), Expect = 0.87, Sum P(2) = 0.58 Identities = 16/27 (59%), Positives = 25/27 (92%), Frame = +1 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEE 209 K EEEE+EE+EE+EEEEE+EE++ +++ Sbjct: 9742 KLEEEEEEEEEEEEEEEEEEEEKKKKK 9822 Score = 82 (28.9 bits), Expect = 8.6, Sum P(2) = 1.0 Identities = 14/20 (70%), Positives = 20/20 (100%), Frame = +1 Query: 191 EDEEDEEEEEDEEDEDEEED 210 E+EE+EEEEE+EE+E+EEE+ Sbjct: 9748 EEEEEEEEEEEEEEEEEEEE 9807 Score = 50 (17.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06 Identities = 14/41 (34%), Positives = 19/41 (46%), Frame = +3 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87 RW A KF+D K KA + + KT P G+ K + Sbjct: 873 RWSLRPAWST*KFQDSQKVPKAIQKNKNKT--KPGGKKKTR 989 Score = 47 (16.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06 Identities = 11/39 (28%), Positives = 20/39 (51%), Frame = +1 Query: 41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP 79 SKK ++ KT +E+ K + + + ER+ K +P Sbjct: 6202 SKKQKQKQKTKKERERKKGRKKERKKERKKERKRKKDLP 6318 Score = 41 (14.4 bits), Expect = 1.1, Sum P(3) = 0.68 Identities = 11/21 (52%), Positives = 11/21 (52%), Frame = +2 Query: 166 KPDAAKKGVVKAEKSKKKKEE 186 KP K K K KKKKEE Sbjct: 8528 KP-CLKTKQTKQNKKKKKKEE 8587 >X64743;S37462 G.gallus RSFR mRNA Length = 801 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06 Identities = 28/33 (84%), Positives = 31/33 (93%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDE-EDEEDEEEEEDEED 204 GV KAEKSKKKKEEEEDE EDEEDEE+EE+EE+ Sbjct: 9 GVAKAEKSKKKKEEEEDEDEDEEDEEDEEEEEN 107 Score = 131 (46.1 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 28/38 (73%), Positives = 32/38 (84%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 GV KAEKSKKKKEEEEDE+ E+EEDEEDE+EEE+ Sbjct: 9 GVAKAEKSKKKKEEEEDED-----EDEEDEEDEEEEEN 107 Score = 130 (45.8 bits), Expect = 1.7e-05, P = 1.7e-05 Identities = 29/41 (70%), Positives = 34/41 (82%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDE-EDEEDEEEEEDEEDEDE---EE 209 GV KAEKSKKKKEEEEDE EDEEDEE+EE+EE+ + +E Sbjct: 9 GVAKAEKSKKKKEEEEDEDEDEEDEEDEEEEENVEAGHPQE 131 >M14483 Human prothymosin alpha mRNA, complete cds. Length = 490 Plus Strand HSPs: Score = 123 (43.3 bits), Expect = 2.2e-06, P = 2.2e-06 Identities = 28/65 (43%), Positives = 39/65 (60%), Frame = +1 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 LKEK K++ G+ DA G E +++ + E DEE+EE EEEE+EE+ D EE Sbjct: 181 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 351 Query: 210 DDDDE 214 +D DE Sbjct: 352 EDGDE 366 Score = 93 (32.7 bits), Expect = 0.22, P = 0.20 Identities = 31/81 (38%), Positives = 42/81 (51%), Frame = +1 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE------ 203 LKEK K++ G+ DA G E +++ + E DEE+EE EEEE+EE Sbjct: 181 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 351 Query: 204 ---DEDEE----------EDDDDE 214 DEDEE EDD+D+ Sbjct: 352 EDGDEDEEAESATGKRAAEDDEDD 423 Score = 84 (29.6 bits), Expect = 3.1, P = 0.95 Identities = 22/60 (36%), Positives = 36/60 (60%), Frame = +1 Query: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE------EEDDDD 213 A G+ +A + V + E+ ++EEEE+E D E+E+ +EDEE E E+D+DD Sbjct: 247 ANEENGEQEADNE-VDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 423 Query: 214 E 214 + Sbjct: 424 D 426 >L81783 Homo sapiens (subclone 9_d11 from P1 H26) DNA sequence, complete Length = 2998 Plus Strand HSPs: Score = 140 (49.3 bits), Expect = 2.3e-06, P = 2.3e-06 Identities = 23/43 (53%), Positives = 39/43 (90%), Frame = +3 Query: 172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K + K +K K+K++EEE+EE+EE+EEEEE+EE+E+EEE+++++ Sbjct: 867 KSI*KPKKKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 995 Score = 133 (46.8 bits), Expect = 1.8e-05, P = 1.8e-05 Identities = 23/36 (63%), Positives = 34/36 (94%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 K +K K+K+EEEE+EE+EE+EEEEE+EE+E+EEE++ Sbjct: 885 KKKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 992 Score = 133 (46.8 bits), Expect = 1.8e-05, P = 1.8e-05 Identities = 22/36 (61%), Positives = 34/36 (94%), Frame = +3 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K KK+K +EE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 885 KKKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 992 Score = 125 (44.0 bits), Expect = 0.00017, P = 0.00017 Identities = 21/35 (60%), Positives = 33/35 (94%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K ++ +K++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 888 KKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 992 >U40719 Rattus norvegicus S-adenosylmethionine decarboxylase (AMDP3) Length = 3433 Plus Strand HSPs: Score = 140 (49.3 bits), Expect = 2.4e-06, P = 2.4e-06 Identities = 28/75 (37%), Positives = 51/75 (68%), Frame = +3 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K Y+ A K K+K EK+ +G+ +G + E+ ++++EEEE+EE+EE+EEEE Sbjct: 522 KS*YKIIAKKKKKKEEKEKEG-GGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEE 698 Query: 200 EDEEDEDEEEDDDDE 214 E++E E++EE++ ++ Sbjct: 699 EEQEQEEQEEEEQEQ 743 Score = 127 (44.7 bits), Expect = 9.8e-05, P = 9.8e-05 Identities = 26/58 (44%), Positives = 41/58 (70%), Frame = +3 Query: 158 IAAYRAKGKPDAAKKGVVKAEKSKKKK-EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 I A + K K + K+G + + + EEEE+EE+EE+EEEEE+EE+E+EEE+++ E Sbjct: 537 IIAKKKKKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQE 710 Score = 124 (43.7 bits), Expect = 0.00023, P = 0.00023 Identities = 23/71 (32%), Positives = 47/71 (66%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K KE + +G+ + ++ + E+ ++++EEEE+EE+E+++EE+E+EE Sbjct: 555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734 Query: 204 DEDEEEDDDDE 214 E EE++ ++E Sbjct: 735 QEQEEQEQEEE 767 Score = 111 (39.1 bits), Expect = 0.0077, P = 0.0076 Identities = 23/74 (31%), Positives = 47/74 (63%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K KE + +G+ + ++ + E+ ++++EEEE+EE+E+++EE+E+EE Sbjct: 555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734 Query: 204 DEDEEEDDDDE--- 214 E EE++ ++E Sbjct: 735 QEQEEQEQEEEQEQ 776 Score = 109 (38.4 bits), Expect = 0.013, P = 0.013 Identities = 23/75 (30%), Positives = 47/75 (62%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K KE + +G+ + ++ + E+ ++++EEEE+EE+E+++EE+E+EE Sbjct: 555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734 Query: 204 DEDEEEDDDDE---- 214 E EE++ ++E Sbjct: 735 QEQEEQEQEEEQEQQ 779 Score = 107 (37.7 bits), Expect = 0.022, P = 0.022 Identities = 23/76 (30%), Positives = 47/76 (61%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K KE + +G+ + ++ + E+ ++++EEEE+EE+E+++EE+E+EE Sbjct: 555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734 Query: 204 DEDEEEDDDDE----- 214 E EE++ ++E Sbjct: 735 QEQEEQEQEEEQEQQQ 782 Score = 105 (37.0 bits), Expect = 0.038, P = 0.037 Identities = 23/77 (29%), Positives = 47/77 (61%), Frame = +3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK K KE + +G+ + ++ + E+ ++++EEEE+EE+E+++EE+E+EE Sbjct: 555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734 Query: 204 DEDEEEDDDDE------ 214 E EE++ ++E Sbjct: 735 QEQEEQEQEEEQEQQQQ 785 Score = 81 (28.5 bits), Expect = 5.3, Sum P(2) = 0.99 Identities = 12/31 (38%), Positives = 25/31 (80%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 E+ +++++EEE++E EE E+EEE E+ + ++ Sbjct: 699 EEQEQEEQEEEEQEQEEQEQEEEQEQQQQQQ 791 Score = 47 (16.5 bits), Expect = 5.3, Sum P(2) = 0.99 Identities = 14/46 (30%), Positives = 23/46 (50%), Frame = +1 Query: 47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPN 92 R K +E+ K E+ K K + +++ K K + KKK K+ N Sbjct: 574 RRKEEEEEEEEKEEEEKKKKKKKKKKKKKKKKKKKKKKKKKKKNKN 711 Score = 45 (15.8 bits), Expect = 8.3, Sum P(2) = 1.0 Identities = 14/60 (23%), Positives = 27/60 (45%), Frame = +1 Query: 37 FSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96 F + + K +R + + + K E+ + +K E++ K K + KKK K K+ Sbjct: 517 FKKVNIKL*QRRRKRRRRRRRKEEEEEEEEKEEEEKKKKKKKKKKKKKKKKKKKKKKKKK 696 >L21693 Human (clone pHG2) prothymosin alpha gene, complete cds. Length = 333 Plus Strand HSPs: Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06 Identities = 28/65 (43%), Positives = 39/65 (60%), Frame = +1 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 LKEK K++ G+ DA G E +++ + E DEE+EE EEEE+EE+ D EE Sbjct: 49 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEE 219 Query: 210 DDDDE 214 +D DE Sbjct: 220 EDGDE 234 Score = 108 (38.0 bits), Expect = 0.00018, P = 0.00018 Identities = 28/67 (41%), Positives = 42/67 (62%), Frame = +1 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEEEEEDE---ED 204 LKEK K++ G+ DA G E +++ + E DEE+EE +EEEEE+E E+ Sbjct: 49 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEE 219 Query: 205 EDEEEDDDDE 214 ED +ED++ E Sbjct: 220 EDGDEDEEAE 249 Score = 80 (28.2 bits), Expect = 0.51, P = 0.40 Identities = 23/62 (37%), Positives = 36/62 (58%), Frame = +1 Query: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE---------DEEED 210 A G+ +A + V + E+ ++EEEE+E D E+E+ +EDEE E D+E+D Sbjct: 115 ANEENGEQEADSE-VDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESPTGKRAAEDDEDD 291 Query: 211 DDD 213 D D Sbjct: 292 DVD 300 >M14794 Human prothymosin alpha mRNA, lymphocyte clone pIF536. Length = 333 Plus Strand HSPs: Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06 Identities = 28/65 (43%), Positives = 39/65 (60%), Frame = +3 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 LKEK K++ G+ DA G E +++ + E DEE+EE EEEE+EE+ D EE Sbjct: 117 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 287 Query: 210 DDDDE 214 +D DE Sbjct: 288 EDGDE 302 Score = 108 (38.0 bits), Expect = 0.00018, P = 0.00018 Identities = 28/67 (41%), Positives = 42/67 (62%), Frame = +3 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEEEEEDE---ED 204 LKEK K++ G+ DA G E +++ + E DEE+EE +EEEEE+E E+ Sbjct: 117 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 287 Query: 205 EDEEEDDDDE 214 ED +ED++ E Sbjct: 288 EDGDEDEEAE 317 >D78176 Mouse DNA for primary transcript of atrial natriuretic clearance Length = 2384 Plus Strand HSPs: Score = 138 (48.6 bits), Expect = 3.8e-06, P = 3.8e-06 Identities = 23/39 (58%), Positives = 36/39 (92%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + KK+KEEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 368 RRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 484 Score = 138 (48.6 bits), Expect = 3.8e-06, P = 3.8e-06 Identities = 23/44 (52%), Positives = 39/44 (88%), Frame = +2 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KG + + +KK++EEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 350 RKGRRRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 481 Score = 135 (47.5 bits), Expect = 9.6e-06, P = 9.6e-06 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E+ K+K+EEEE+EE+EE+EEEEE+EE+E+EEE+++++ Sbjct: 371 RREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 487 Score = 131 (46.1 bits), Expect = 3.0e-05, P = 3.0e-05 Identities = 23/44 (52%), Positives = 39/44 (88%), Frame = +2 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KG + + ++KKE+EE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 350 RKGR-RRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 478 Score = 119 (41.9 bits), Expect = 0.00082, P = 0.00082 Identities = 27/63 (42%), Positives = 42/63 (66%), Frame = +2 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 LK+K + R + K ++ K EK ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 305 LKKKKRRRRRRRRRRRKGRRRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 484 Query: 210 --- 209 Sbjct: 485 KKK 493 Score = 117 (41.2 bits), Expect = 0.0014, P = 0.0014 Identities = 27/64 (42%), Positives = 42/64 (65%), Frame = +2 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 LK+K + R + K ++ K EK ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 305 LKKKKRRRRRRRRRRRKGRRRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 484 Query: 210 ---- 209 Sbjct: 485 KKKK 496 >X79327 R.norvegicus (Sprague Dawley) calreticulin mRNA. Length = 1539 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 4.4e-06, P = 4.4e-06 Identities = 35/95 (36%), Positives = 57/95 (60%), Frame = +2 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 956 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1123 Query: 178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+EDE+D +E+EDEEDE EE+++D Sbjct: 1124 EEDKKRKEEEEAEDKEDEDDRDEDEDEEDEKEEDEED 1234 Score = 118 (41.5 bits), Expect = 0.00094, P = 0.00094 Identities = 24/53 (45%), Positives = 40/53 (75%), Frame = +2 Query: 165 GKPDAAKKGVV-KAEKSKKKKEEEEDEE--DEEDEEEEEDEEDEDEEEDDDDE 214 G AA+K + K ++ ++ KEEEED++ +EE+ E++EDE+D DE+ED++DE Sbjct: 1055 GVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDEDDRDEDEDEEDE 1213 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011 Identities = 29/90 (32%), Positives = 52/90 (57%), Frame = +2 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1028 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1165 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KE+E+D +++EDEE+E++E++ED DE Sbjct: 1166 KEDEDDRDEDEDEEDEKEEDEEDATGQAKDE 1258 >L05517 Plasmodium chabaudi DNA sequence, exon 1. Length = 1596 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 4.5e-06, P = 4.5e-06 Identities = 24/40 (60%), Positives = 36/40 (90%), Frame = +1 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K+E S ++K EEE+EE+EE+EEEEE+EE+E+EE+DD +E Sbjct: 16 MKSEDSTEEKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEE 135 Score = 115 (40.5 bits), Expect = 0.0022, P = 0.0022 Identities = 20/32 (62%), Positives = 30/32 (93%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 EK+++++EEEE+EE+EE+EEEEE+EE +D EE Sbjct: 40 EKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEE 135 Score = 104 (36.6 bits), Expect = 0.041, P = 0.041 Identities = 20/34 (58%), Positives = 30/34 (88%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-- 209 EK+++++EEEE+EE+EE+EEEEE+EE +D EE Sbjct: 40 EKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEELE 141 Score = 92 (32.4 bits), Expect = 0.98, P = 0.63 Identities = 20/42 (47%), Positives = 31/42 (73%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------D 210 EK+++++EEEE+EE+EE+EEEEE+EE +D EE + Sbjct: 40 EKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEELELIKEETEE 165 >X07699 Mouse nucleolin gene Length = 11,478 Plus Strand HSPs: Score = 138 (48.6 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 27/64 (42%), Positives = 47/64 (73%), Frame = +1 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEK-SKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 L + E+ + AKGK AK +KA+ ++++ +EEEDE+DE++++EEED+ED+DEE Sbjct: 4501 LPDSEEEVMEITTAKGKKTPAKVVPMKAKSVAEEEDDEEEDEDDEDEDDEEEDDEDDDEE 4680 Query: 209 EDDD 212 E+++ Sbjct: 4681 EEEE 4692 Score = 138 (48.6 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 28/65 (43%), Positives = 45/65 (69%), Frame = +1 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 L + E+ + AKGK AK V K+K EEE+DEE++ED+E+E+DEE++DE++ Sbjct: 4501 LPDSEEEVMEITTAKGKKTPAK---VVPMKAKSVAEEEDDEEEDEDDEDEDDEEEDDEDD 4671 Query: 210 DDDDE 214 D+++E Sbjct: 4672 DEEEE 4686 Score = 116 (40.8 bits), Expect = 0.0022, P = 0.0022 Identities = 24/59 (40%), Positives = 39/59 (66%), Frame = +2 Query: 160 AYRAKGK-PDAAKKGVV---KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 A +AK P KKG K K+ K ++E+ +EDE++E+E++ +EDED+EE+D+ E Sbjct: 3995 AAQAKALVPTPGKKGAATPAKGAKNGKNAKKEDSDEDEDEEDEDDSDEDEDDEEEDEFE 4171 Score = 114 (40.1 bits), Expect = 0.0038, P = 0.0038 Identities = 24/48 (50%), Positives = 34/48 (70%), Frame = +2 Query: 165 GKPDAAK--KGVVKAEKSKKK-KEEEEDEEDEEDEEEEEDEEDEDEEE 209 GK AA KG + +KK+ +E+EDEEDE+D +E+ED+E+EDE E Sbjct: 4028 GKKGAATPAKGAKNGKNAKKEDSDEDEDEEDEDDSDEDEDDEEEDEFE 4171 Score = 112 (39.4 bits), Expect = 0.0065, P = 0.0065 Identities = 24/55 (43%), Positives = 34/55 (61%), Frame = +2 Query: 160 AYRAKGK-PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 A +AK P KKG K K + + E+ +EDE+EE DE+D DE+EDD++E Sbjct: 3995 AAQAKALVPTPGKKGAATPAKGAKNGKNAKKEDSDEDEDEE-DEDDSDEDEDDEEE 4159 Score = 108 (38.0 bits), Expect = 0.019, P = 0.019 Identities = 21/46 (45%), Positives = 29/46 (63%), Frame = +2 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 D + +VK K K EDEED+E+E+DEED+DEEE+D + Sbjct: 4160 DEFEPPIVKGVKPAKAAPAAPASEDEEDDEDEDDEEDDDEEEEDGE 4297 Score = 105 (37.0 bits), Expect = 0.041, P = 0.041 Identities = 20/45 (44%), Positives = 34/45 (75%), Frame = +1 Query: 163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 AK P AK V + E +++ E++EDE+DEE+++E++DEE+E+E Sbjct: 4561 AKVVPMKAKS-VAEEEDDEEEDEDDEDEDDEEEDDEDDDEEEEEE 4692 Score = 98 (34.5 bits), Expect = 0.26, P = 0.23 Identities = 22/40 (55%), Positives = 29/40 (72%), Frame = +2 Query: 172 KGV--VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KGV KA + E+EED+EDE+DEE++ DEE+ED E D Sbjct: 4184 KGVKPAKAAPAAPASEDEEDDEDEDDEEDD-DEEEEDGELD 4303 Score = 84 (29.6 bits), Expect = 9.9, P = 1.0 Identities = 14/18 (77%), Positives = 18/18 (100%), Frame = +2 Query: 197 EEEEDEEDEDEEEDDDDE 214 E+EED+EDED+EEDDD+E Sbjct: 4229 EDEEDDEDEDDEEDDDEE 4282 >D78308 Rat mRNA for calreticulin, complete cds. Length = 1816 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 35/95 (36%), Positives = 57/95 (60%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 958 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1125 Query: 178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+EDE+D +E+EDEEDE EE+++D Sbjct: 1126 EEDKKRKEEEEAEDKEDEDDRDEDEDEEDEKEEDEED 1236 Score = 118 (41.5 bits), Expect = 0.0010, P = 0.0010 Identities = 24/53 (45%), Positives = 40/53 (75%), Frame = +1 Query: 165 GKPDAAKKGVV-KAEKSKKKKEEEEDEE--DEEDEEEEEDEEDEDEEEDDDDE 214 G AA+K + K ++ ++ KEEEED++ +EE+ E++EDE+D DE+ED++DE Sbjct: 1057 GVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDEDDRDEDEDEEDE 1215 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011 Identities = 29/90 (32%), Positives = 52/90 (57%), Frame = +1 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1030 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1167 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KE+E+D +++EDEE+E++E++ED DE Sbjct: 1168 KEDEDDRDEDEDEEDEKEEDEEDATGQAKDE 1260 >M92988 Mouse calregulin (ERp60) mRNA, complete cds. Length = 1873 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 32/97 (32%), Positives = 58/97 (59%), Frame = +3 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1011 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1178 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ KK+KEEEE E+ E+D++ +EDE++EDE+E+D++E Sbjct: 1179 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1289 Score = 130 (45.8 bits), Expect = 3.6e-05, P = 3.6e-05 Identities = 33/95 (34%), Positives = 57/95 (60%), Frame = +3 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1011 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1178 Query: 178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+ED++D +E+EDEEDE EE++++ Sbjct: 1179 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1289 Score = 103 (36.3 bits), Expect = 0.057, P = 0.055 Identities = 27/90 (30%), Positives = 52/90 (57%), Frame = +3 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1083 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1220 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KE+++D +++EDEE+E++E++E+ DE Sbjct: 1221 KEDDDDRDEDEDEEDEKEEDEEESPGQAKDE 1313 >X53363 Rat mRNA for calreticulin Length = 1882 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06 Identities = 35/95 (36%), Positives = 57/95 (60%), Frame = +3 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 978 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1145 Query: 178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+EDE+D +E+EDEEDE EE+++D Sbjct: 1146 EEDKKRKEEEEAEDKEDEDDRDEDEDEEDEKEEDEED 1256 Score = 118 (41.5 bits), Expect = 0.0010, P = 0.0010 Identities = 24/53 (45%), Positives = 40/53 (75%), Frame = +3 Query: 165 GKPDAAKKGVV-KAEKSKKKKEEEEDEE--DEEDEEEEEDEEDEDEEEDDDDE 214 G AA+K + K ++ ++ KEEEED++ +EE+ E++EDE+D DE+ED++DE Sbjct: 1077 GVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDEDDRDEDEDEEDE 1235 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011 Identities = 29/90 (32%), Positives = 52/90 (57%), Frame = +3 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1050 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1187 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KE+E+D +++EDEE+E++E++ED DE Sbjct: 1188 KEDEDDRDEDEDEEDEKEEDEEDATGQAKDE 1280 >X14926 Mouse mRNA for calreticulin Length = 2114 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 5.1e-06, P = 5.1e-06 Identities = 32/97 (32%), Positives = 58/97 (59%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1012 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1179 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ KK+KEEEE E+ E+D++ +EDE++EDE+E+D++E Sbjct: 1180 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1290 Score = 130 (45.8 bits), Expect = 3.8e-05, P = 3.8e-05 Identities = 33/95 (34%), Positives = 57/95 (60%), Frame = +1 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 GL + V K G +++N + + Y ++ K A + K K D ++ + + Sbjct: 1012 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1179 Query: 178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212 E+ KK+KEEEE D+ED++D +E+EDEEDE EE++++ Sbjct: 1180 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1290 Score = 103 (36.3 bits), Expect = 0.058, P = 0.057 Identities = 27/90 (30%), Positives = 52/90 (57%), Frame = +1 Query: 125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183 A++ G E W T A +KQ +K+K +++ R K + + K+ K E+ + Sbjct: 1084 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1221 Query: 184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KE+++D +++EDEE+E++E++E+ DE Sbjct: 1222 KEDDDDRDEDEDEEDEKEEDEEESPGQAKDE 1314 >S79240 Lox4=Ultrabithorax/abdominal-A homolog [Hirudo medicinalis=leeches, Length = 2336 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 37/106 (34%), Positives = 60/106 (56%), Frame = +2 Query: 109 RPKIKGEHPGLS-IGDVAK-KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166 R K+K E + + +V K K G + +NT ++ Q D + A+ + Sbjct: 740 RMKVKKEKQQIKELNEVGKGKEGSVNSNTPGNNNQNDNDNNNNNNSNLSSDTSD--AEWE 913 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEED--EEDEEEEEDEEDEDEEEDDD 212 ++K + + +K+EEE+DEED EED+EEE+DEE+EDEEE+D+ Sbjct: 914 NSVSEKEMEN*KLQLEKEEEEDDEEDDEEEDDEEEDDEEEEDEEEEDE 1057 Score = 137 (48.2 bits), Expect = 5.2e-06, P = 5.2e-06 Identities = 36/106 (33%), Positives = 61/106 (57%), Frame = +2 Query: 109 RPKIKGEHPGLS-IGDVAK-KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166 R K+K E + + +V K K G + +NT ++ Q D + A+ + Sbjct: 740 RMKVKKEKQQIKELNEVGKGKEGSVNSNTPGNNNQNDNDNNNNNNSNLSSDTSD--AEWE 913 Query: 167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++K + E K + E+EE+E+DEED+EEE+DEE++DEEE+D++E Sbjct: 914 NSVSEK---EMEN*KLQLEKEEEEDDEEDDEEEDDEEEDDEEEEDEEE 1048 >X17199 Chicken mRNA for nucleolin C23 Length = 2576 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 5.4e-06, P = 5.4e-06 Identities = 42/135 (31%), Positives = 64/135 (47%), Frame = +2 Query: 80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 139 PK + K+K P PK+ + E E G + KK + A Sbjct: 122 PKNQMKQKKMAP-PPKKVEES-----EEEESSDLEESSGEEVMVPPKKQQKAAVTPAKKA 283 Query: 140 KQPYEKKAAKLKEKY---EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196 P +K A K+ +K +A K + KK V + +K K +++E +EEDE Sbjct: 284 ATPAKKAATPAKKAVTPAKKAVATPAKKAVAPSPKKAAVVGKGAKNGKNAKKEESEEEDE 463 Query: 197 EEEEDEEDEDEEEDDDDE 214 ++E+DEEDEDEEE+ D+E Sbjct: 464 DDEDDEEDEDEEEESDEE 517 Score = 134 (47.2 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 26/49 (53%), Positives = 37/49 (75%), Frame = +2 Query: 166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KP AK KA K + E+EEDEEDE+++EE+ED+E+EDEEE +D++ Sbjct: 707 KPTPAKATPAKA---KAESEDEEDEEDEDEDEEDEDDEEEDEEESEDEK 844 Score = 127 (44.7 bits), Expect = 9.2e-05, P = 9.2e-05 Identities = 43/134 (32%), Positives = 65/134 (48%), Frame = +2 Query: 80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 139 PK + K+K P PK+ + E E G + KK + A Sbjct: 122 PKNQMKQKKMAP-PPKKVEES-----EEEESSDLEESSGEEVMVPPKKQQKAAVTPAKKA 283 Query: 140 KQPYEKKAAKLKEKY---EKDIAAYRAKGKPDAAKKGVV-----KAEKSKKKKEEEEDEE 191 P +K A K+ +K +A K + KK V K K+ KK+E EE++E Sbjct: 284 ATPAKKAATPAKKAVTPAKKAVATPAKKAVAPSPKKAAVVGKGAKNGKNAKKEESEEEDE 463 Query: 192 DEEDEEEEEDEEDEDEEEDD 211 D+ED+EE+EDEE+E +EE++ Sbjct: 464 DDEDDEEDEDEEEESDEEEE 523 Score = 126 (44.4 bits), Expect = 0.00012, P = 0.00012 Identities = 21/39 (53%), Positives = 32/39 (82%), Frame = +2 Query: 172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 KG + +KK++ EEEDE+DE+DEE+E++EE+ DEEE+ Sbjct: 407 KGAKNGKNAKKEESEEEDEDDEDDEEDEDEEEESDEEEE 523 Score = 111 (39.1 bits), Expect = 0.0073, P = 0.0072 Identities = 27/71 (38%), Positives = 41/71 (57%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE-EDE 196 DD++ E+ E + A + K P A KAE ++ EE+EDE++E ED+ Sbjct: 632 DDEEEDEEDDESEDEAMDTTPAPVK-KPTPAKATPAKAKAESEDEEDEEDEDEDEEDEDD 808 Query: 197 EEEEDEEDEDEE 208 EEE++EE EDE+ Sbjct: 809 EEEDEEESEDEK 844 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021 Identities = 32/93 (34%), Positives = 45/93 (48%), Frame = +2 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 G G AKK + +D + E + + E+ E + A K AA A Sbjct: 410 GAKNGKNAKKEESEEEDEDDEDDEEDEDEEEESDEEEEPAVPVKPAAKKSAAAVPAKKPA 589 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K++ EEE+EED+E EE+EED+E EDE D Sbjct: 590 VVPAKQESEEEEEEDDE-EEDEEDDESEDEAMD 685 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021 Identities = 37/94 (39%), Positives = 51/94 (54%), Frame = +2 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV--V 175 G G AKK E DD+ E + + +E E++ A K P AAKK V Sbjct: 410 GAKNGKNAKK--EESEEEDEDDEDDEEDEDEE-EESDEEEEPAVPVK--P-AAKKSAAAV 571 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 A+K ++E EE+EE+++EEEDEED DE ED+ Sbjct: 572 PAKKPAVVPAKQESEEEEEEDDEEEDEED-DESEDE 676 Score = 95 (33.4 bits), Expect = 0.50, P = 0.39 Identities = 35/97 (36%), Positives = 49/97 (50%), Frame = +2 Query: 118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 G G AKK E DD+ E + + +E E++ A K P AAKK A Sbjct: 410 GAKNGKNAKK--EESEEEDEDDEDDEEDEDEE-EESDEEEEPAVPVK--P-AAKKSAA-A 568 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK +E EE EEEED+E+EDEE+D+ ++ Sbjct: 569 VPAKKPAVVPAKQESEE--EEEEDDEEEDEEDDESED 673 >X16481 Rat mRNA for zinc(2+) binding protein Length = 936 Plus Strand HSPs: Score = 128 (45.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06 Identities = 33/70 (47%), Positives = 47/70 (67%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 E A LKEK KD +A G+ + KK VV+ E++ ++EEEE ED ED++E DEE Sbjct: 146 ELSAKDLKEK--KDKVEEKA-GRKER-KKEVVEEEENGAEEEEEETAEDGEDDDEG-DEE 310 Query: 204 DEDEEEDDDD 213 DE+EEE++D+ Sbjct: 311 DEEEEEEEDE 340 Score = 113 (39.8 bits), Expect = 0.00057, Sum P(2) = 0.00057 Identities = 22/58 (37%), Positives = 38/58 (65%), Frame = +2 Query: 157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +++A K K D ++ + E+ K+ EEEE+ +EE+EE ED ED+DE +++D+E Sbjct: 146 ELSAKDLKEKKDKVEEKAGRKERKKEVVEEEENGAEEEEEETAEDGEDDDEGDEEDEE 319 Score = 109 (38.4 bits), Expect = 0.0019, Sum P(2) = 0.0019 Identities = 35/80 (43%), Positives = 50/80 (62%), Frame = +2 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE-----DEEDEEDEEE 198 E A LKEK KD +A G+ + KK VV+ E++ ++EEEE +++DE DEE+ Sbjct: 146 ELSAKDLKEK--KDKVEEKA-GRKER-KKEVVEEEENGAEEEEEETAEDGEDDDEGDEED 313 Query: 199 EEDEEDEDE---------EEDDDD 213 EE+EE+EDE EED+ D Sbjct: 314 EEEEEEEDEGPVRKRTAEEEDEAD 385 Score = 40 (14.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06 Identities = 7/24 (29%), Positives = 12/24 (50%), Frame = +3 Query: 77 YIPPKGETKKKFKDPNAPKRPPSA 100 ++PP + +DP +P P A Sbjct: 42 HLPPSRAPPPRPRDPGSPPAPAPA 113 >X54171;X53282 H.sapiens NG2-6 DNA Length = 6221 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 6.3e-06, P = 6.3e-06 Identities = 29/47 (61%), Positives = 37/47 (78%), Frame = +2 Query: 171 KKGVVKAEKSKKKKEE---EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 KK + E+ KKK+EE EE+EE+EEDEEEEE+ E+E+EEED DDE Sbjct: 4994 KKKEEEEERRKKKEEEGGEEEEEEEEEDEEEEEEVEEEEEEEDFDDE 5134 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 38/119 (31%), Positives = 65/119 (54%), Frame = +2 Query: 97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT---AADDKQPYEKKAAKLKEK 153 P F L C I G+H +S+ + A+ E + + KQ + A+ +K Sbjct: 4790 PAMVFQLKCGSGPVYISGQHL-VSVEEDAESEDEEEEDVKLLSISGKQSALEVEARFHKK 4966 Query: 154 YEKDIAAYRAKGKPDAAKKGVVKAEKS--KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 E ++ + K K + ++ K E+ ++++EEEEDEE+EE+ EEEE+EED D+EE + Sbjct: 4967 -E*NLLLLKRKKKEEEEERRKKKEEEGGEEEEEEEEEDEEEEEEVEEEEEEEDFDDEETE 5143 Query: 212 D 212 + Sbjct: 5144 E 5146 Score = 115 (40.5 bits), Expect = 0.0028, P = 0.0028 Identities = 19/39 (48%), Positives = 34/39 (87%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K E+ +++K++EE+ +EE+EEEEEDEE+E+E E++++E Sbjct: 5000 KEEEEERRKKKEEEGGEEEEEEEEEDEEEEEEVEEEEEE 5116 >L13238 Rattus norvegicus polymeric immunoglobulin receptor mRNA, 3' Length = 120 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +1 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 102 Score = 124 (43.7 bits), Expect = 6.6e-06, P = 6.6e-06 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +1 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 105 Score = 123 (43.3 bits), Expect = 8.8e-06, P = 8.8e-06 Identities = 20/35 (57%), Positives = 34/35 (97%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++ Sbjct: 1 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 105 Score = 113 (39.8 bits), Expect = 0.00013, P = 0.00013 Identities = 19/32 (59%), Positives = 31/32 (96%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE+ Sbjct: 13 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 108 Score = 109 (38.4 bits), Expect = 0.00038, P = 0.00038 Identities = 18/32 (56%), Positives = 31/32 (96%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E+E++ Sbjct: 16 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKK 111 Score = 105 (37.0 bits), Expect = 0.0011, P = 0.0011 Identities = 17/32 (53%), Positives = 31/32 (96%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E++++ Sbjct: 19 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKK 114 Score = 102 (35.9 bits), Expect = 0.0024, P = 0.0024 Identities = 17/32 (53%), Positives = 30/32 (93%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E +++ Sbjct: 22 EEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKK 117 Score = 100 (35.2 bits), Expect = 0.0040, P = 0.0040 Identities = 20/37 (54%), Positives = 31/37 (83%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----- 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 10 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 120 >L13200;L18807 C. elegans cosmid ZK1236. Length = 28,878 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06 Identities = 51/192 (26%), Positives = 97/192 (50%), Frame = +1 Query: 25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTYIPPK 81 E K+ D ++ + F+++ + + + + K+K GK +KA + + T P + Sbjct: 13957 EPKENIVDPTLIEAFFTREAARKAEIKAKKDKMAAGKKGASSKASASVSKASAST--PAR 14130 Query: 82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 G K P K PP L + RP + S +K E DD++ Sbjct: 14131 GA--KAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE---EEVEDDEE 14295 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEED-----EEDEED 195 P KK +++E+ E++ + + + + + EK ++ +KEEEED E++E++ Sbjct: 14296 PVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKE 14475 Query: 196 EEEEEDEEDEDEEEDDDDE 214 EEEE+ EE ++EEE++++E Sbjct: 14476 EEEEKVEEKKEEEEEEEEE 14532 Score = 133 (46.8 bits), Expect = 2.1e-05, P = 2.1e-05 Identities = 51/193 (26%), Positives = 98/193 (50%), Frame = +1 Query: 25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTYIPPK 81 E K+ D ++ + F+++ + + + + K+K GK +KA + + T P + Sbjct: 13957 EPKENIVDPTLIEAFFTREAARKAEIKAKKDKMAAGKKGASSKASASVSKASAST--PAR 14130 Query: 82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 G K P K PP L + RP + S +K E DD++ Sbjct: 14131 GA--KAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE---EEVEDDEE 14295 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEED-----EEDEED 195 P KK +++E+ E++ + + + + + EK ++ +KEEEED E++E++ Sbjct: 14296 PVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKE 14475 Query: 196 EEEEE-DEEDEDEEEDDDDE 214 EEEE+ +E+ E+EEE++++E Sbjct: 14476 EEEEKVEEKKEEEEEEEEEE 14535 Score = 108 (38.0 bits), Expect = 0.18, Sum P(2) = 0.17 Identities = 51/193 (26%), Positives = 90/193 (46%), Frame = +1 Query: 25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTYIPPK 81 E K+ D ++ + F+++ + + + + K+K GK +KA + + T P + Sbjct: 13957 EPKENIVDPTLIEAFFTREAARKAEIKAKKDKMAAGKKGASSKASASVSKASAST--PAR 14130 Query: 82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 G K P K PP L + RP + S +K E DD++ Sbjct: 14131 GA--KAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE---EEVEDDEE 14295 Query: 142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEED-------EEDE 193 P KK +++E+ E++ + + + + + EK ++ +KEEEED E E Sbjct: 14296 PVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKE 14475 Query: 194 EDEE------EEEDEEDEDE 207 E+EE EEE+EE+E+E Sbjct: 14476 EEEEKVEEKKEEEEEEEEEE 14535 Score = 40 (14.1 bits), Expect = 0.18, Sum P(2) = 0.17 Identities = 9/23 (39%), Positives = 13/23 (56%), Frame = +2 Query: 188 EDEEDEEDEEEEEDEEDEDEEED 210 E + EDEE D E + +EE+ Sbjct: 23765 EHDNHREDEEVGIDYEQKKKEEN 23833 Minus Strand HSPs: Score = 103 (36.3 bits), Expect = 0.072, P = 0.069 Identities = 27/77 (35%), Positives = 46/77 (59%), Frame = -1 Query: 138 DDKQPYEKKAAKLKEKYEK-DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE-DEED 195 D K+ ++KAAKL+ K EK + Y + + + ++ + E+ KK+ EE EE DE+ Sbjct: 28080 DGKKIGKRKAAKLQAKEEKRQMREYEVREREERKRR---EEEREKKRDEERAKEEADEKA 27910 Query: 196 EEEEEDEEDEDEEEDDDDE 214 EEE +E E++E + +E Sbjct: 27909 EEERLRKEREEKERKEHEE 27853 >AB001489 Mus musculus DNA for polyimmunoglobulin receptor, complete cds. Length = 29,392 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06 Identities = 30/77 (38%), Positives = 50/77 (64%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D K+ E E+ +K+ R G+ G + E+ ++++EEEE+EE+EE+EE Sbjct: 28451 DSKKQEEGAGRGGVERGKKEKEKRRRGGRGGG---GGEEGEEEEEEEEEEEEEEEEEEEE 28621 Query: 198 EEEDEEDEDEEEDDDDE 214 EEE+EE+EDEEE++++E Sbjct: 28622 EEEEEEEEDEEEEEEEE 28672 Score = 136 (47.9 bits), Expect = 8.9e-06, P = 8.9e-06 Identities = 30/77 (38%), Positives = 52/77 (67%), Frame = +2 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA-KKGVVKAEKSKKKKEEEEDEEDEEDE 196 D K+ E E+ +K+ R G+ ++G + E+ ++++EEEE+EE+EE+E Sbjct: 28451 DSKKQEEGAGRGGVERGKKEKEKRRRGGRGGGGGEEG--EEEEEEEEEEEEEEEEEEEEE 28624 Query: 197 EEEEDEEDEDEEEDDDDE 214 EEEE+EEDE+EEE++++E Sbjct: 28625 EEEEEEEDEEEEEEEEEE 28678 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EEDEEEEE+EE+E+EEE++++E Sbjct: 28595 EEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEE 28705 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EEDEE+EEEEE+EE+E+EEE++++E Sbjct: 28604 EEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 28714 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEEDEE+EE+EEEEE+EE+E+EEE++++E Sbjct: 28613 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEE 28723 Score = 128 (45.1 bits), Expect = 8.7e-05, P = 8.7e-05 Identities = 28/65 (43%), Positives = 47/65 (72%), Frame = +2 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEE 208 KEK EK R G + ++ + E+ ++++EEEE+EE+EE+EEE EE+EE+E+EE Sbjct: 28505 KEK-EKRRRGGRGGGGGEEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEE 28681 Query: 209 EDDDDE 214 E++++E Sbjct: 28682 EEEEEE 28699 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE++EEEE+EE+E+EEE++++E Sbjct: 28592 EEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEE 28702 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE++E+EEEEE+EE+E+EEE++++E Sbjct: 28601 EEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEE 28711 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+E++EE+EEEEE+EE+E+EEE++++E Sbjct: 28607 EEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 28717 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE++E+EE+EEEEE+EE+E+EEE++++E Sbjct: 28610 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEE 28720 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEE++EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 28616 EEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 28726 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EE+E+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 28619 EEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 28729 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++E+EE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 28622 EEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 28732 Score = 119 (41.9 bits), Expect = 0.00087, Sum P(2) = 0.00087 Identities = 21/37 (56%), Positives = 32/37 (86%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ +++EEEE+EE+EE+EEEEE+EE+E+EEE D+ Sbjct: 28637 EEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEERQTDK 28747 Score = 117 (41.2 bits), Expect = 0.0015, Sum P(2) = 0.0015 Identities = 20/35 (57%), Positives = 31/35 (88%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE D Sbjct: 28640 EEDEEEEEEEEEEEEEEEEEEEEEEEEEEEERQTD 28744 Score = 101 (35.6 bits), Expect = 0.12, Sum P(2) = 0.11 Identities = 17/32 (53%), Positives = 29/32 (90%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E + + Sbjct: 28649 EEEEEEEEEEEEEEEEEEEEEEEEEEEERQTD 28744 Score = 50 (17.6 bits), Expect = 0.00087, Sum P(2) = 0.00087 Identities = 19/95 (20%), Positives = 38/95 (40%), Frame = +3 Query: 2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61 +G+P PR +S + + +++ + +K E + +EK K + Sbjct: 28392 QGNPWLPREFKASLGYIETWIQRSRRREQEEEE*KGGRRRRKKEEEEEEEEEEEK-KEKK 28568 Query: 62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96 K K + +++ K K + KKK K K+ Sbjct: 28569 KKKKKKKKKKKKKKKKKKKKKKKKKKMKKKKKKKK 28673 Score = 43 (15.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05 Identities = 9/23 (39%), Positives = 13/23 (56%), Frame = +1 Query: 67 KARYEREMKTYIPPKGETKKKFK 89 + RY TY+P + +TK K K Sbjct: 17107 QVRYTLNTFTYMPRQNKTKHKTK 17175 >U59897 Macropus robustus hypoxanthine phosphoribosyltransferase (Hprt) Length = 1228 Plus Strand HSPs: Score = 135 (47.5 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 24/70 (34%), Positives = 50/70 (71%), Frame = +3 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 +K + + K + +R + + + ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+ Sbjct: 960 RKRRRRRRKRRRRRWRWRMRREVEEIEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1139 Query: 205 EDEEEDDDDE 214 E+EEE++++E Sbjct: 1140 EEEEEEEEEE 1169 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1062 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1172 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1065 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1175 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1068 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1178 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1071 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1181 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1074 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1184 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 1077 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1187 Score = 129 (45.4 bits), Expect = 3.9e-05, P = 3.9e-05 Identities = 21/36 (58%), Positives = 35/36 (97%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++D Sbjct: 1083 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 1190 Score = 129 (45.4 bits), Expect = 3.9e-05, P = 3.9e-05 Identities = 29/65 (44%), Positives = 42/65 (64%), Frame = +2 Query: 155 EKDIAAYRAK--GKPDAAKKGVVKAEK---SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+D+ K P AK+ + + SKK K EEDEEDE++EEEEE+EE+ED++E Sbjct: 737 EEDVEENNVKLVNLPLPAKRAASEIDDKIPSKKVKLSEEDEEDEDEEEEEEEEEEEDDDE 916 Query: 210 DDDDE 214 +D+E Sbjct: 917 AEDEE 931 Score = 124 (43.7 bits), Expect = 0.00016, P = 0.00015 Identities = 29/66 (43%), Positives = 43/66 (65%), Frame = +2 Query: 155 EKDIAAYRAK--GKPDAAKKGVVKAEK---SKKKK--EEEEDEEDEEDEEEEEDEEDEDE 207 E+D+ K P AK+ + + SKK K EE+E++EDEE+EEEEE+EED+DE Sbjct: 737 EEDVEENNVKLVNLPLPAKRAASEIDDKIPSKKVKLSEEDEEDEDEEEEEEEEEEEDDDE 916 Query: 208 EEDDDD 213 ED+++ Sbjct: 917 AEDEEE 934 Score = 117 (41.2 bits), Expect = 0.0011, P = 0.0011 Identities = 41/119 (34%), Positives = 60/119 (50%), Frame = +2 Query: 97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN-----NTAA---DDKQPYEKKAA 148 PP L C I G+H DV + ++ N AA DDK P +K Sbjct: 665 PPVVLRLKCGSGPVYISGQHLVALEEDVEENNVKLVNLPLPAKRAASEIDDKIPSKK--V 838 Query: 149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE-EDEDE 207 KL E+ E+D + + + + E+ ++ +EEE+EE+EE+EEEEE+E E EDE Sbjct: 839 KLSEEDEEDEDEEEEEEEEEEEDDDEAEDEEEIEEVDEEEEEEEEEEEEEEEEEVEVEDE 1018 Query: 208 E 208 E Sbjct: 1019 E 1021 Score = 116 (40.8 bits), Expect = 0.0014, P = 0.0014 Identities = 31/72 (43%), Positives = 44/72 (61%), Frame = +2 Query: 155 EKDIAAYRAK--GKPDAAKKGVVKAEK---SKKKK--EEEEDEEDEEDEEEEEDEEDEDE 207 E+D+ K P AK+ + + SKK K EE+E++EDEE+EEEEE+EED+DE Sbjct: 737 EEDVEENNVKLVNLPLPAKRAASEIDDKIPSKKVKLSEEDEEDEDEEEEEEEEEEEDDDE 916 Query: 208 EEDDD-----DE 214 ED++ DE Sbjct: 917 AEDEEEIEEVDE 952 >Z97055 Human DNA sequence from PAC 388M5 on chromosome 22. Length = 177,568 Minus Strand HSPs: Score = 137 (48.2 bits), Expect = 6.9e-06, P = 6.9e-06 Identities = 28/72 (38%), Positives = 49/72 (68%), Frame = -3 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ E++ + K+K E+ R + + ++ + + +KKKEEEE+EE+EE+EEEE Sbjct: 166970 KKKEEERRRRRKKKEEEGRRRRRRRRRRRRRRR---RRRRRRKKKEEEEEEEEEEEEEEE 166800 Query: 200 EDEEDEDEEEDD 211 E+EE+E+EEE++ Sbjct: 166799 EEEEEEEEEEEE 166764 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 25/68 (36%), Positives = 47/68 (69%), Frame = -3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +K+ + + + +K+ R + + ++ + + +KKKEEEE+EE+EE+EEEEE+EE Sbjct: 166967 KKEEERRRRRKKKEEEGRRRRRRRRRRRRRRRRRRRRRKKKEEEEEEEEEEEEEEEEEEE 166788 Query: 204 DEDEEEDD 211 +E+EEE++ Sbjct: 166787 EEEEEEEE 166764 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05 Identities = 24/69 (34%), Positives = 47/69 (68%), Frame = -3 Query: 144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203 +KK + + + +K R + + ++ + + ++KK+EEE+EE+EE+EEEEE+EE Sbjct: 166970 KKKEEERRRRRKKKEEEGRRRRRRRRRRRRRRRRRRRRRKKKEEEEEEEEEEEEEEEEEE 166791 Query: 204 DEDEEEDDD 212 +E+EEE+++ Sbjct: 166790 EEEEEEEEE 166764 Score = 114 (40.1 bits), Expect = 0.0040, P = 0.0040 Identities = 28/68 (41%), Positives = 46/68 (67%), Frame = -1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K P E++ + KEK E+ R + K KK + E+ +++K++EE+EE+EE+EEEE Sbjct: 167026 KTPSEEEERRKKEKEEE-----RRRRKK---KK---EEEEGRRRKKKEEEEEEEEEEEEE 166880 Query: 200 EDEEDEDE 207 E+EE+E+E Sbjct: 166879 EEEEEEEE 166856 Score = 113 (39.8 bits), Expect = 0.0051, P = 0.0051 Identities = 20/36 (55%), Positives = 30/36 (83%), Frame = -1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + KKKKEEEE ++ EEEEE+EE+E+EEE++++E Sbjct: 166969 RRKKKKEEEEGRRRKKKEEEEEEEEEEEEEEEEEEE 166862 Score = 113 (39.8 bits), Expect = 0.0051, P = 0.0051 Identities = 27/87 (31%), Positives = 50/87 (57%), Frame = -3 Query: 126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 KK GE +++ ++ K +E + R + + ++ K E+ ++++E Sbjct: 167000 KKEGERRRKKKKKEEERRRRRKKKEEEGRRRRRRRRRRRRRRRRRRRRRKKKEEEEEEEE 166821 Query: 186 EEEDEEDEEDEEEEEDEED--EDEEED 210 EEE+EE+EE+EEEEE+EE+ E+EE + Sbjct: 166820 EEEEEEEEEEEEEEEEEEEVVEEEERN 166740 Score = 111 (39.1 bits), Expect = 0.0088, P = 0.0088 Identities = 21/38 (55%), Positives = 32/38 (84%), Frame = -1 Query: 179 KSKKKKEEEEDE--EDEEDEEEEEDEEDEDEEEDDDDE 214 + KKKKEEEE + +E+EEEEE+EE+E+EEE++++E Sbjct: 166969 RRKKKKEEEEGRRRKKKEEEEEEEEEEEEEEEEEEEEE 166856 >L21696 Human (clone pHG5) prothymosin alpha gene, complete cds. Length = 333 Plus Strand HSPs: Score = 120 (42.2 bits), Expect = 7.2e-06, P = 7.2e-06 Identities = 26/64 (40%), Positives = 36/64 (56%), Frame = +1 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K+ EK A+ DA G E +++ + E DEE+EE EEEE+EE+ D EE+ Sbjct: 43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222 Query: 211 DDDE 214 D DE Sbjct: 223 DGDE 234 Score = 105 (37.0 bits), Expect = 0.00039, P = 0.00039 Identities = 26/69 (37%), Positives = 39/69 (56%), Frame = +1 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEEEEEDE---EDE 205 K+ EK A+ DA G E +++ + E DEE+EE +EEEEE+E E+E Sbjct: 43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222 Query: 206 DEEEDDDDE 214 D +ED++ E Sbjct: 223 DGDEDEEAE 249 Score = 90 (31.7 bits), Expect = 0.019, P = 0.019 Identities = 24/83 (28%), Positives = 44/83 (53%), Frame = +1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K EKK + + +D A + + ++ + ++ +++ EEE+EE+E D EEE Sbjct: 43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222 Query: 200 EDEEDEDEE--------EDDDDE 214 + +EDE+ E EDD+D+ Sbjct: 223 DGDEDEEAESATGKRAAEDDEDD 291 Score = 85 (29.9 bits), Expect = 0.070, P = 0.068 Identities = 25/84 (29%), Positives = 44/84 (52%), Frame = +1 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K EKK + + +D A + + ++ + ++ +++ EEE+EE+E D EEE Sbjct: 43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222 Query: 200 EDEEDEDEE--------EDD-DDE 214 + +EDE+ E EDD DD+ Sbjct: 223 DGDEDEEAESATGKRAAEDDEDDD 294 Score = 80 (28.2 bits), Expect = 0.51, P = 0.40 Identities = 23/62 (37%), Positives = 36/62 (58%), Frame = +1 Query: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE---------DEEED 210 A G+ +A + V + E+ ++EEEE+E D E+E+ +EDEE E D+E+D Sbjct: 115 ANEENGEQEADSE-VDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 291 Query: 211 DDD 213 D D Sbjct: 292 DVD 300 >U93275 Mus musculus glucokinase gene, 5' flanking region. Length = 2623 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 7.2e-06, P = 7.2e-06 Identities = 24/37 (64%), Positives = 34/37 (91%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K KK+KEEEE+EE+EE EEEEE EE+E+EEE++++E Sbjct: 892 KKKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEE 1002 Score = 131 (46.1 bits), Expect = 3.0e-05, P = 3.0e-05 Identities = 22/39 (56%), Positives = 36/39 (92%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +K K+++EEEE+EE EE+EE+EE+EE+E+EEE++++E Sbjct: 895 KKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEE 1011 Score = 130 (45.8 bits), Expect = 4.0e-05, P = 4.0e-05 Identities = 22/36 (61%), Positives = 34/36 (94%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K KKKKE+EE+EE+EE+E EEE+E++E+EEE++++E Sbjct: 889 KKKKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEE 996 Score = 123 (43.3 bits), Expect = 0.00028, P = 0.00028 Identities = 20/39 (51%), Positives = 36/39 (92%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K EK ++++EEEE+ E+EE++EEEE+EE+E+EEE+++++ Sbjct: 901 KKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEK 1017 Score = 122 (42.9 bits), Expect = 0.00037, P = 0.00037 Identities = 24/44 (54%), Positives = 36/44 (81%), Frame = +1 Query: 171 KKGVVKAEKSKKKKEE-EEDEEDEEDEEEEEDEEDEDEEEDDDD 213 KK K E+ ++++EE EE+EE EE+EEEEE+EE+E+EEE ++D Sbjct: 895 KKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED 1026 Score = 118 (41.5 bits), Expect = 0.0011, P = 0.0011 Identities = 23/48 (47%), Positives = 36/48 (75%), Frame = +1 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + K K + ++ + E+ ++K+EEEE+EE+EE+EEEEE EED +EEE Sbjct: 898 KKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED*EEEE 1041 Score = 110 (38.7 bits), Expect = 0.0095, P = 0.0094 Identities = 23/53 (43%), Positives = 38/53 (71%), Frame = +1 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + K K + ++ + E+ ++K+EEEE+EE+EE+EEEEE EED +EEE + + Sbjct: 898 KKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED*EEEEKKE-K 1053 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021 Identities = 24/51 (47%), Positives = 37/51 (72%), Frame = +1 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED-EDEE--E 209 + K K + ++ + E+ ++K+EEEE+EE+EE+EEEEE EED E+EE E Sbjct: 898 KKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED*EEEEKKE 1050 >U52064 Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene, Length = 3489 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 7.7e-06, P = 7.7e-06 Identities = 30/97 (30%), Positives = 58/97 (59%), Frame = +1 Query: 119 LSIGDVAKKLGEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 +SIG + G ++TA ++A+K +++ ++ A G + +K+ V Sbjct: 790 ISIGSSSPSEGSWGDDTAMLVLLAEIAEEASKNEKECSENNQAGEDNGDNEISKESQVDK 969 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + K +EEE E DEEDEE++E++++ED+EEDD+++ Sbjct: 970 DDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEED 1080 Score = 134 (47.2 bits), Expect = 1.4e-05, P = 1.4e-05 Identities = 27/82 (32%), Positives = 48/82 (58%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 +N DD++ E ++ E D + D + E+ ++ +EE+DEED Sbjct: 973 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 1152 Query: 193 EEDEEEEEDEEDEDEEEDDDDE 214 +E+E+EEEDEE+++EEED++D+ Sbjct: 1153 DEEEDEEEDEEEDEEEEDEEDD 1218 Score = 132 (46.5 bits), Expect = 2.5e-05, P = 2.5e-05 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++ +EE+DEE++E+E+EEEDEE+EDEE+DDD++ Sbjct: 1120 EEDDEEDDEEDDEEEDEEEDEEEDEEEEDEEDDDDED 1230 Score = 132 (46.5 bits), Expect = 2.5e-05, P = 2.5e-05 Identities = 30/85 (35%), Positives = 48/85 (56%), Frame = +1 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 +N DD++ E ++ E D + D + E+ ++ +EE+DEED Sbjct: 973 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 1152 Query: 193 EEDEEEEEDEEDEDEEED---DDDE 214 +E+E+EEEDEE+++EEED DDDE Sbjct: 1153 DEEEDEEEDEEEDEEEEDEEDDDDE 1227 Score = 132 (46.5 bits), Expect = 2.5e-05, P = 2.5e-05 Identities = 25/87 (28%), Positives = 55/87 (63%), Frame = +1 Query: 128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187 L E+ + ++K+ E A ++ + +I+ K D K + +++ ++ EE+ Sbjct: 856 LAEIAEEASKNEKECSENNQAG-EDNGDNEISKESQVDKDDNDNKDDEEEQETDEEDEED 1032 Query: 188 EDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++E+DEED+EE+++E+DE+++E+DD+E Sbjct: 1033 DEEDDEEDDEEDDEEDDEEDDEEDDEE 1113 Score = 129 (45.4 bits), Expect = 5.7e-05, P = 5.7e-05 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEDEE++E+EE+EED++DED E+++DDE Sbjct: 1144 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDE 1254 Score = 128 (45.1 bits), Expect = 7.5e-05, P = 7.5e-05 Identities = 21/37 (56%), Positives = 33/37 (89%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E ++ EEE++EEDEE++EEEEDEED+D+E+++D+E Sbjct: 1135 EDDEEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEE 1245 Score = 125 (44.0 bits), Expect = 0.00017, P = 0.00017 Identities = 21/38 (55%), Positives = 35/38 (92%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDED-EEEDDDDE 214 E+ ++++EEEDEE++E+EE+EED++DED E+E+DD+E Sbjct: 1144 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEE 1257 Score = 120 (42.2 bits), Expect = 0.00068, P = 0.00068 Identities = 21/38 (55%), Positives = 34/38 (89%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD 213 E+ +++ EEEEDEED++DE E+EED+E+ED++ED++D Sbjct: 1171 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEED 1284 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020 Identities = 16/37 (43%), Positives = 35/37 (94%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ + ++E+EE++E+EEDEE+++DE++EDEE+D++++ Sbjct: 1153 DEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEED 1263 Score = 114 (40.1 bits), Expect = 0.0034, P = 0.0034 Identities = 18/37 (48%), Positives = 32/37 (86%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E ++ +EE+E+EEDEED+++E++E++ED+EE+D E Sbjct: 1162 EDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKE 1272 Score = 107 (37.7 bits), Expect = 0.022, P = 0.022 Identities = 21/41 (51%), Positives = 34/41 (82%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD--- 213 E+ +++ EEEEDEED++DE E+EED+E+ED++ED++D Sbjct: 1171 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEEDGGD 1293 Score = 106 (37.3 bits), Expect = 0.029, P = 0.029 Identities = 15/77 (19%), Positives = 51/77 (66%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D++Q E++ + ++ ++ + + + D ++ + ++ ++ ++E++DE++++DE+ Sbjct: 1957 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQEQQDEQEQQDEQ 2136 Query: 198 EEEDEEDEDEEEDDDDE 214 E++DE+ +DE++ D++ Sbjct: 2137 EQQDEQQQDEQQQQDEQ 2187 Score = 94 (33.1 bits), Expect = 0.68, P = 0.49 Identities = 15/85 (17%), Positives = 51/85 (60%), Frame = +1 Query: 130 EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 E + D+Q + + + E+ ++D + + D ++ + ++ ++++++E+ Sbjct: 2065 EQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQQ 2244 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDDE 214 ++DE++++EE+++++E E+E ++ E Sbjct: 2245 QQDEQEQQEEQEQQEEQEQELEEQE 2319 Score = 93 (32.7 bits), Expect = 0.88, P = 0.58 Identities = 14/77 (18%), Positives = 51/77 (66%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D++Q E++ + ++ ++ + + + D ++ + ++ +++ E+++DE++++DE+ Sbjct: 1942 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDE-QQQDEQQQDEQEQQDEQ 2118 Query: 198 EEEDEEDEDEEEDDDDE 214 E++DE+++ +E+ D++ Sbjct: 2119 EQQDEQEQQDEQQQDEQ 2169 Score = 92 (32.4 bits), Expect = 1.1, P = 0.68 Identities = 14/77 (18%), Positives = 49/77 (63%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D++Q E++ + +++ E++ + + + + E+ ++ +++++DE+ ++DE+ Sbjct: 2062 DEQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQ 2241 Query: 198 EEEDEEDEDEEEDDDDE 214 +++DE+++ EE++ +E Sbjct: 2242 QQQDEQEQQEEQEQQEE 2292 Score = 87 (30.6 bits), Expect = 4.2, P = 0.99 Identities = 10/37 (27%), Positives = 29/37 (78%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ +++ E+++DE+ ++DE++++DE+ + +E+ DE Sbjct: 2128 DEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDE 2238 Score = 86 (30.3 bits), Expect = 5.4, P = 1.0 Identities = 20/77 (25%), Positives = 44/77 (57%), Frame = +1 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE-EDEEDEEDEE 197 D+Q + + + E+ ++D + + + ++ + E+ +++E+E ED+E E +E+ Sbjct: 2179 DEQQQQDEQQQQDEQQQQDEQQQQDEQEQQEEQEQQEEQEQELEEQEQELEDQEQELEEQ 2358 Query: 198 EEEDEEDEDEEEDDDDE 214 E+E EE E E E+ + E Sbjct: 2359 EQELEEQEQELEEQEQE 2409 >U08110 Mus musculus RNA1 homolog (Fug1) mRNA, complete cds. Length = 2981 Plus Strand HSPs: Score = 125 (44.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06 Identities = 21/37 (56%), Positives = 32/37 (86%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ + + EEEE EED+E+EE+EEDEED+DEEE++ +E Sbjct: 1352 DEGEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEE 1462 Score = 117 (41.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05 Identities = 18/39 (46%), Positives = 34/39 (87%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E +++E EED+E+EEDEE+EED+++E+EE+++++E Sbjct: 1355 EGEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEE 1471 Score = 113 (39.8 bits), Expect = 0.00027, Sum P(2) = 0.00027 Identities = 20/41 (48%), Positives = 31/41 (75%), Frame = +2 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + K S E E+++E+EE EE++E+EEDE++EEDDD+E Sbjct: 1322 MAKVLASLSDDEGEDEDEEEEGEEDDEEEEDEEDEEDDDEE 1444 Score = 111 (39.1 bits), Expect = 0.00047, Sum P(2) = 0.00047 Identities = 19/31 (61%), Positives = 28/31 (90%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 E+ ++ EEEEDEEDEED++EEE+E++E+EE Sbjct: 1379 EEGEEDDEEEEDEEDEEDDDEEEEEQEEEEE 1471 Score = 52 (18.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06 Identities = 25/94 (26%), Positives = 38/94 (40%), Frame = +2 Query: 103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKL----------KE 152 LFC YRP + ++ D+AK + A + ++ K KL KE Sbjct: 227 LFCFVYRPAGEPATAAMASEDIAKLAETLAKTQVAGGQLSFKGKGLKLNTAEDAKDVIKE 406 Query: 153 KYEKD-IAAYRAKGKPDAAKKGVVKAEKSKKKKE 185 E D + A R +G + V A+ +KK E Sbjct: 407 IEEFDGLEALRLEGNTVGVEAARVIAKALEKKSE 508 >D38613 Mouse 921-L mRNA for presynaptic protein, complete cds. Length = 1080 Plus Strand HSPs: Score = 122 (42.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06 Identities = 23/47 (48%), Positives = 36/47 (76%), Frame = +3 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +G+ + +G + E + +EEEE+EE+EE+EEEEE+EE+E+EEED Sbjct: 900 EGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEED 1040 Score = 115 (40.5 bits), Expect = 0.0017, P = 0.0017 Identities = 22/51 (43%), Positives = 39/51 (76%), Frame = +3 Query: 164 KGKPDAAKKGVVKAE-KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 +G+ + +G + E + + + E EE+EE+EE+EEEEE+EE+E+EEE+++D Sbjct: 888 EGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEED 1040 Score = 113 (39.8 bits), Expect = 0.0030, P = 0.0029 Identities = 31/99 (31%), Positives = 58/99 (58%), Frame = +1 Query: 117 PGLSI---GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173 PG + VA K E ++++ E++ K KEK EK+ + K K +K Sbjct: 664 PGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEK-EKEKEKEKEKEKEKEKEKE 840 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K EK K+K++E+E E+++E E+E+E E+++++E++ + E Sbjct: 841 KEK-EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 960 Score = 112 (39.4 bits), Expect = 0.0039, P = 0.0039 Identities = 21/51 (41%), Positives = 37/51 (72%), Frame = +3 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +G+ + +G + E + + E E EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 882 EGEGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEE 1034 Score = 111 (39.1 bits), Expect = 0.0051, P = 0.0051 Identities = 24/72 (33%), Positives = 48/72 (66%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ EK+ K KEK EK+ + K K +K K ++ +K+KE+E+++E E+++E Sbjct: 748 EEEEEEEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 924 Query: 198 EEEDEEDEDEEE 209 +E+++E E E+E Sbjct: 925 KEKEKEKEKEKE 960 Score = 109 (38.4 bits), Expect = 0.0088, P = 0.0088 Identities = 21/52 (40%), Positives = 39/52 (75%), Frame = +3 Query: 164 KGKPDAAKKGVVKAE-KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +G+ + +G + E + + + E E +EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 882 EGEGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEE 1037 Score = 107 (37.7 bits), Expect = 0.015, P = 0.015 Identities = 25/72 (34%), Positives = 48/72 (66%), Frame = +1 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 ++++ EK+ K KEK EK+ + K K +K K EK K+K++E+E E+++E E+ Sbjct: 754 EEEEEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEK 927 Query: 198 EEEDEEDEDEEE 209 E+E E+++++E+ Sbjct: 928 EKEKEKEKEKEK 963 Score = 105 (37.0 bits), Expect = 0.026, P = 0.026 Identities = 18/34 (52%), Positives = 30/34 (88%), Frame = +1 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K++EEEE+EE+EE+EEEEE++E E E+E + ++ Sbjct: 706 RKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEK 807 Score = 101 (35.6 bits), Expect = 0.077, P = 0.074 Identities = 37/119 (31%), Positives = 64/119 (53%), Frame = +1 Query: 91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 P+A P RP P LF S+ K K E + ++ E + ++ EK+ Sbjct: 634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEE------EEEEEEEEEEEEEEEEKEKEKEKEK 795 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K KEK EK+ + K K +K K EK K+K++E+E E+++E E+E+E E+++ + Sbjct: 796 EKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEKEKEKEKKK 969 Query: 208 EE 209 ++ Sbjct: 970 KK 975 Score = 100 (35.2 bits), Expect = 0.099, P = 0.095 Identities = 21/52 (40%), Positives = 36/52 (69%), Frame = +3 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDE-EDEEDEEEEEDEEDEDEEEDDDDE 214 +G+ + +G + E + + E E E E EE+EEEEE+EE+E+EEE++++E Sbjct: 870 EGEGEGEGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEE 1025 Score = 99 (34.8 bits), Expect = 0.13, P = 0.12 Identities = 35/119 (29%), Positives = 63/119 (52%), Frame = +1 Query: 91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 P+A P RP P LF S+ K K E + ++ E + ++ EK+ Sbjct: 634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEK 813 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K KEK EK+ + K K +K + EK K+K++E+E E+++E E+E+E ++ + + Sbjct: 814 EKEKEK-EKEKEKEKEKEKEKEKEK---EKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKK 981 Query: 208 EE 209 ++ Sbjct: 982 KK 987 Score = 99 (34.8 bits), Expect = 0.13, P = 0.12 Identities = 36/119 (30%), Positives = 62/119 (52%), Frame = +1 Query: 91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 P+A P RP P LF S+ K K E + ++ E + ++ EK+ Sbjct: 634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEK 813 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K KEK EK+ + K K +K EK K+K++E+E E+++E E+E+E E+ + + Sbjct: 814 EKEKEK-EKEKEKEKEKEKEKEKEK-----EKEKEKEKEKEKEKEKEKEKEKEKEKKKKK 975 Query: 208 EE 209 ++ Sbjct: 976 KK 981 Score = 98 (34.5 bits), Expect = 0.17, P = 0.16 Identities = 35/120 (29%), Positives = 63/120 (52%), Frame = +1 Query: 91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147 P+A P RP P LF S+ K K E + ++ E + ++ EK+ Sbjct: 634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEK 813 Query: 148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K KEK EK+ + K K +K K EK K+K++E+E E+++E E+E++ ++ + + Sbjct: 814 EKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEKKKKKKKKK 987 Query: 208 EE 209 ++ Sbjct: 988 KK 993 Score = 48 (16.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06 Identities = 19/73 (26%), Positives = 33/73 (45%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSA-KEKGKFEDMAKADKARYEREMKTYIPPK 81 +EE +++ + E +K E+ K KEK K ++ K + E+E K K Sbjct: 709 KEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE-KEKEKEK 885 Query: 82 GETKKKFKDPNAPK 95 + K+K K+ K Sbjct: 886 EKEKEKEKEKEKEK 927 >U02506 Rattus norvegicus clone 7 polymeric immunoglobulin receptor mRNA, Length = 648 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 8.9e-06, P = 8.9e-06 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 239 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 349 Score = 125 (44.0 bits), Expect = 4.2e-05, P = 4.2e-05 Identities = 22/32 (68%), Positives = 31/32 (96%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEE 239 Score = 122 (42.9 bits), Expect = 0.00010, P = 0.00010 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3 Query: 170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KK K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E Sbjct: 102 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 236 Score = 120 (42.2 bits), Expect = 0.00019, P = 0.00019 Identities = 23/63 (36%), Positives = 45/63 (71%), Frame = +3 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 +K+ K I Y +P + +V ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++ Sbjct: 33 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 209 Query: 212 DDE 214 ++E Sbjct: 210 EEE 218 Score = 117 (41.2 bits), Expect = 0.00046, P = 0.00046 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E Sbjct: 99 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 221 Score = 116 (40.8 bits), Expect = 0.00061, P = 0.00061 Identities = 22/33 (66%), Positives = 31/33 (93%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEK 242 Score = 109 (38.4 bits), Expect = 0.0047, P = 0.0047 Identities = 21/47 (44%), Positives = 37/47 (78%), Frame = +2 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214 G + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ ++ + Sbjct: 236 GEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEIRRRKEEGQ 376 Score = 100 (35.2 bits), Expect = 0.059, P = 0.057 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 266 Score = 98 (34.5 bits), Expect = 0.10, P = 0.098 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKK 269 Score = 96 (33.8 bits), Expect = 0.18, P = 0.16 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKK 272 Score = 86 (30.3 bits), Expect = 2.8, P = 0.94 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209 E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 287 >U35323 Mus musculus H2-M alpha chain (H2-Ma) gene, H2-M beta 2 chain Length = 53,419 Plus Strand HSPs: Score = 107 (37.7 bits), Expect = 0.052, Sum P(2) = 0.050 Identities = 25/71 (35%), Positives = 45/71 (63%), Frame = +2 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA-EKSKKKKEEEEDEEDEEDEEE 198 K+ +KK K K+K EK + K K +K K EK K+K++E+E E+++E E+E Sbjct: 23834 KKKRKKKKKKKKKKKEKKKEXEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 24013 Query: 199 EEDEEDEDEEE 209 +E E+++++E+ Sbjct: 24014 KETEKEKEKEK 24046 Score = 97 (34.1 bits), Expect = 0.72, Sum P(2) = 0.52 Identities = 19/51 (37%), Positives = 35/51 (68%), Frame = +2 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K K KK K +K +KKKE E+++E E+++E+E+++E E E+E + ++ Sbjct: 23828 KKKKKRKKKKKKKKKKKEKKKEXEKEKEKEKEKEKEKEKEKEKEKEKEKEK 23980 Score = 96 (33.8 bits), Expect = 0.93, Sum P(2) = 0.61 Identities = 19/51 (37%), Positives = 35/51 (68%), Frame = +2 Query: 164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K K KK K +K KKK+ E+E E+++E E+E+E E+++++E++ + E Sbjct: 23831 KKKKRKKKKKKKKKKKEKKKEXEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 23983 Score = 94 (33.1 bits), Expect = 1.6, Sum P(2) = 0.79 Identities = 24/70 (34%), Positives = 44/70 (62%), Frame = +2 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ EKK KEK EK+ + K K +K + EK K+K++E+E E+++E E+E+ Sbjct: 23867 KKKKEKKKEXEKEK-EKEKEKEKEKEKEKEKEK---EKEKEKEKEKEKEKEKEKETEKEK 24034 Query: 200 EDEEDEDEEE 209 E E+ +++++ Sbjct: 24035 EKEKKKEKKK 24064 Score = 88 (31.0 bits), Expect = 7.2, Sum P(2) = 1.0 Identities = 24/69 (34%), Positives = 41/69 (59%), Frame = +2 Query: 140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199 K+ +K+ K KEK EK+ + K K +K K EK K+K++E+E E ++E E+E+ Sbjct: 23873 KKEKKKEXEKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKETEKEKEKEK 24046 Query: 200 EDEEDEDEE 208 + E+ + E Sbjct: 24047 KKEKKKKTE 24073 Score = 49 (17.2 bits), Expect = 0.052, Sum P(2) = 0.050 Identities = 18/48 (37%), Positives = 25/48 (52%), Frame = +2 Query: 100 AFFLFCSEYRPKIK---------GEHPGLSIGDVAKKLGEMWNNTAADDKQ 141 AFF FC + P IK G H G+++G+ KKL +W + KQ Sbjct: 7790 AFFFFCHKMWP*IKTICAEEEAEGLH-GMNLGNA*KKL--IWLRPPSHGKQ 7933 Minus Strand HSPs: Score = 136 (47.9 bits), Expect = 9.0e-06, P = 9.0e-06 Identities = 28/51 (54%), Positives = 38/51 (74%), Frame = -3 Query: 167 PDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 P A KGV + KKKEEEE+EE+EE+EEEEE+EE+E+EEE+++D Sbjct: 43643 PSAGIKGVRHHRPAN**ILKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEED 43491 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 22/31 (70%), Positives = 31/31 (100%), Frame = -3 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 KK++EEEE+EE+EE+EEEEE+EE+E+EEE+D Sbjct: 43583 KKEEEEEEEEEEEEEEEEEEEEEEEEEEEED 43491 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 28/51 (54%), Positives = 38/51 (74%), Frame = -3 Query: 167 PDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 P A KGV + KKKEEEE+EE+EE+EEEEE+EE+E+EEE+++D Sbjct: 43643 PSAGIKGVRHHRPAN**ILKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEED- 43491 >AD000092 Homo sapiens DNA from chromosome 19p13.2 cosmids R31240, R30272 and Length = 110,096 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06 Identities = 32/92 (34%), Positives = 55/92 (59%), Frame = +1 Query: 123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 DV + GE W+ + + A L+ A + K K D ++ + + E+ KK Sbjct: 90172 DVGRNKGEAWSWS*CRGRAGLAGGKA-LRCVLCLQAAEKQMKDKQDEEQR-LKEEEEDKK 90345 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KEEEE E+ E+DE+++EDEEDE+++E+D++E Sbjct: 90346 RKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 90441 Score = 127 (44.7 bits), Expect = 0.00012, P = 0.00012 Identities = 34/91 (37%), Positives = 55/91 (60%), Frame = +1 Query: 123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182 DV + GE W+ + + A L+ A + K K D ++ + + E+ KK Sbjct: 90172 DVGRNKGEAWSWS*CRGRAGLAGGKA-LRCVLCLQAAEKQMKDKQDEEQR-LKEEEEDKK 90345 Query: 183 KKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212 +KEEEE D+ED+ED +E+EEDEED++E+E++D Sbjct: 90346 RKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 90444 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070 Identities = 22/63 (34%), Positives = 38/63 (60%), Frame = +1 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 EK KD + K + K + E+++ K+++E+ +EDEEDEE++E++E+ED Sbjct: 90280 EKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQA 90459 Query: 212 DDE 214 DE Sbjct: 90460 KDE 90468 Score = 44 (15.5 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05 Identities = 10/20 (50%), Positives = 11/20 (55%), Frame = +1 Query: 78 IPPKGETKKKFKDPNAPKRP 97 +PP G TKK P AP P Sbjct: 21346 VPPAGLTKKGVSSP-APPGP 21402 Score = 42 (14.8 bits), Expect = 0.00012, Sum P(2) = 0.00012 Identities = 9/25 (36%), Positives = 16/25 (64%), Frame = +1 Query: 102 FLFCSEYRPKIKGEHPGLSIGDVAK 126 FL+ RP+ +GE S+G++A+ Sbjct: 48913 FLYLFY*RPRQQGEEFKTSLGNIAR 48987 Score = 41 (14.4 bits), Expect = 0.00015, Sum P(2) = 0.00015 Identities = 7/16 (43%), Positives = 11/16 (68%), Frame = +2 Query: 89 KDPNAPKRPPSAFFLF 104 K P+ P++ S F+LF Sbjct: 75728 KSPHKPRKEGSFFYLF 75775 Score = 40 (14.1 bits), Expect = 0.00019, Sum P(2) = 0.00019 Identities = 8/19 (42%), Positives = 12/19 (63%), Frame = +1 Query: 84 TKKKFKDPNAPKRPPSAFF 102 T +K+ +PN P P +FF Sbjct: 83455 T*RKW*NPNFPVHSPPSFF 83511 >U75698 Kaposi's sarcoma-associated herpesvirus long unique region, 80 Length = 137,508 Minus Strand HSPs: Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06 Identities = 30/97 (30%), Positives = 58/97 (59%), Frame = -3 Query: 119 LSIGDVAKKLGEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177 +SIG + G ++TA ++A+K +++ ++ A G + +K+ V Sbjct: 126508 ISIGSSSPSEGSWGDDTAMLVLLAEIAEEASKNEKECSENNQAGEDNGDNEISKESQVDK 126329 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + K +EEE E DEEDEE++E++++ED+EEDD+++ Sbjct: 126328 DDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEED 126218 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05 Identities = 27/82 (32%), Positives = 48/82 (58%), Frame = -3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 +N DD++ E ++ E D + D + E+ ++ +EE+DEED Sbjct: 126325 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 126146 Query: 193 EEDEEEEEDEEDEDEEEDDDDE 214 +E+E+EEEDEE+++EEED++D+ Sbjct: 126145 DEEEDEEEDEEEDEEEEDEEDD 126080 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++ +EE+DEE++E+E+EEEDEE+EDEE+DDD++ Sbjct: 126178 EEDDEEDDEEDDEEEDEEEDEEEDEEEEDEEDDDDED 126068 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05 Identities = 30/85 (35%), Positives = 48/85 (56%), Frame = -3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 +N DD++ E ++ E D + D + E+ ++ +EE+DEED Sbjct: 126325 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 126146 Query: 193 EEDEEEEEDEEDEDEEED---DDDE 214 +E+E+EEEDEE+++EEED DDDE Sbjct: 126145 DEEEDEEEDEEEDEEEEDEEDDDDE 126071 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05 Identities = 25/87 (28%), Positives = 55/87 (63%), Frame = -3 Query: 128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187 L E+ + ++K+ E A ++ + +I+ K D K + +++ ++ EE+ Sbjct: 126442 LAEIAEEASKNEKECSENNQAG-EDNGDNEISKESQVDKDDNDNKDDEEEQETDEEDEED 126266 Query: 188 EDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++E+DEED+EE+++E+DE+++E+DD+E Sbjct: 126265 DEEDDEEDDEEDDEEDDEEDDEEDDEE 126185 Score = 129 (45.4 bits), Expect = 6.7e-05, P = 6.7e-05 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEDEE++E+EE+EED++DED E+++DDE Sbjct: 126154 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDE 126044 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05 Identities = 21/37 (56%), Positives = 33/37 (89%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E ++ EEE++EEDEE++EEEEDEED+D+E+++D+E Sbjct: 126163 EDDEEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEE 126053 Score = 125 (44.0 bits), Expect = 0.00020, P = 0.00020 Identities = 21/38 (55%), Positives = 35/38 (92%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDED-EEEDDDDE 214 E+ ++++EEEDEE++E+EE+EED++DED E+E+DD+E Sbjct: 126154 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEE 126041 Score = 120 (42.2 bits), Expect = 0.00079, P = 0.00079 Identities = 21/38 (55%), Positives = 34/38 (89%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD 213 E+ +++ EEEEDEED++DE E+EED+E+ED++ED++D Sbjct: 126127 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEED 126014 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023 Identities = 16/37 (43%), Positives = 35/37 (94%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ + ++E+EE++E+EEDEE+++DE++EDEE+D++++ Sbjct: 126145 DEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEED 126035 Score = 114 (40.1 bits), Expect = 0.0040, P = 0.0040 Identities = 18/37 (48%), Positives = 32/37 (86%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E ++ +EE+E+EEDEED+++E++E++ED+EE+D E Sbjct: 126136 EDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKE 126026 Score = 107 (37.7 bits), Expect = 0.025, P = 0.025 Identities = 21/41 (51%), Positives = 34/41 (82%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD--- 213 E+ +++ EEEEDEED++DE E+EED+E+ED++ED++D Sbjct: 126127 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEEDGGD 126005 Score = 106 (37.3 bits), Expect = 0.033, P = 0.033 Identities = 15/77 (19%), Positives = 51/77 (66%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D++Q E++ + ++ ++ + + + D ++ + ++ ++ ++E++DE++++DE+ Sbjct: 125341 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQEQQDEQEQQDEQ 125162 Query: 198 EEEDEEDEDEEEDDDDE 214 E++DE+ +DE++ D++ Sbjct: 125161 EQQDEQQQDEQQQQDEQ 125111 Score = 94 (33.1 bits), Expect = 0.76, P = 0.53 Identities = 15/85 (17%), Positives = 51/85 (60%), Frame = -3 Query: 130 EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189 E + D+Q + + + E+ ++D + + D ++ + ++ ++++++E+ Sbjct: 125233 EQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQQ 125054 Query: 190 EEDEEDEEEEEDEEDEDEEEDDDDE 214 ++DE++++EE+++++E E+E ++ E Sbjct: 125053 QQDEQEQQEEQEQQEEQEQELEEQE 124979 Score = 93 (32.7 bits), Expect = 0.98, P = 0.63 Identities = 14/77 (18%), Positives = 51/77 (66%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D++Q E++ + ++ ++ + + + D ++ + ++ +++ E+++DE++++DE+ Sbjct: 125356 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDE-QQQDEQQQDEQEQQDEQ 125180 Query: 198 EEEDEEDEDEEEDDDDE 214 E++DE+++ +E+ D++ Sbjct: 125179 EQQDEQEQQDEQQQDEQ 125129 Score = 92 (32.4 bits), Expect = 1.3, P = 0.72 Identities = 14/77 (18%), Positives = 49/77 (63%), Frame = -3 Query: 138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197 D++Q E++ + +++ E++ + + + + E+ ++ +++++DE+ ++DE+ Sbjct: 125236 DEQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQ 125057 Query: 198 EEEDEEDEDEEEDDDDE 214 +++DE+++ EE++ +E Sbjct: 125056 QQQDEQEQQEEQEQQEE 125006 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99 Identities = 17/35 (48%), Positives = 25/35 (71%), Frame = -2 Query: 175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + ++S + E +EDEEDE DEEE +D ++EDE E Sbjct: 68333 ISPDQSSGESEYDEDEEDE-DEEENDDVQEEDEPE 68232 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99 Identities = 10/37 (27%), Positives = 29/37 (78%), Frame = -3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++ +++ E+++DE+ ++DE++++DE+ + +E+ DE Sbjct: 125170 DEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDE 125060 Score = 86 (30.3 bits), Expect = 6.0, P = 1.0 Identities = 20/77 (25%), Positives = 44/77 (57%), Frame = -3 Query: 139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE-EDEEDEEDEE 197 D+Q + + + E+ ++D + + + ++ + E+ +++E+E ED+E E +E+ Sbjct: 125119 DEQQQQDEQQQQDEQQQQDEQQQQDEQEQQEEQEQQEEQEQELEEQEQELEDQEQELEEQ 124940 Query: 198 EEEDEEDEDEEEDDDDE 214 E+E EE E E E+ + E Sbjct: 124939 EQELEEQEQELEEQEQE 124889 >AC004015 Human BAC clone RG333F24 from 7q11.2-q21, complete sequence. Length = 144,239 Minus Strand HSPs: Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06 Identities = 25/60 (41%), Positives = 46/60 (76%), Frame = -2 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+D +G+ + +G + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 113305 EEDSVEEEEEGEGEG--EGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 113132 Score = 119 (41.9 bits), Expect = 0.0010, P = 0.0010 Identities = 21/41 (51%), Positives = 35/41 (85%), Frame = -2 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 V + E+ + + E EE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 113293 VEEEEEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEE 113171 >M35983 Rat ID-A element in the S-100 beta-subunit gene. Length = 198 Plus Strand HSPs: Score = 121 (42.6 bits), Expect = 9.2e-06, P = 9.2e-06 Identities = 21/33 (63%), Positives = 31/33 (93%), Frame = +3 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 +K KKKKE+EE+EE+EE+EEEEE+EE+E+E+ + Sbjct: 96 KKEKKKKEKEEEEEEEEEEEEEEEEEEEEEKRN 194 Score = 120 (42.2 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 22/30 (73%), Positives = 28/30 (93%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205 K EK KK+KEEEE+EE+EE+EEEEE+EE+E Sbjct: 96 KKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185 Score = 113 (39.8 bits), Expect = 7.9e-05, P = 7.9e-05 Identities = 19/31 (61%), Positives = 30/31 (96%), Frame = +3 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 + K+KK++E++EE+EE+EEEEE+EE+E+EEE Sbjct: 93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185 Score = 106 (37.3 bits), Expect = 0.00051, P = 0.00051 Identities = 17/31 (54%), Positives = 30/31 (96%), Frame = +3 Query: 182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 +KKE+++ E++EE+EEEEE+EE+E+EEE+++ Sbjct: 93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185 Score = 104 (36.6 bits), Expect = 0.00087, P = 0.00087 Identities = 16/31 (51%), Positives = 31/31 (100%), Frame = +3 Query: 181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 +KK+++++++E+EE+EEEEE+EE+E+EEE++ Sbjct: 93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185 Score = 101 (35.6 bits), Expect = 0.0019, P = 0.0019 Identities = 16/32 (50%), Positives = 30/32 (93%), Frame = +3 Query: 183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +K+E++ +E EE+EEEEE+EE+E+EEE+++++ Sbjct: 93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEEK 188 >L21694 Human (clone pHG3) prothymosin alpha gene, complete cds. Length = 330 Plus Strand HSPs: Score = 119 (41.9 bits), Expect = 9.4e-06, P = 9.4e-06 Identities = 27/65 (41%), Positives = 37/65 (56%), Frame = +1 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K+ EK A+ DA G E +++ + E DEE+EE EEEE+EE + EEED Sbjct: 43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEGDGEEED 222 Query: 211 -DDDE 214 D+DE Sbjct: 223 GDEDE 237 Score = 106 (37.3 bits), Expect = 0.00030, P = 0.00030 Identities = 26/68 (38%), Positives = 36/68 (52%), Frame = +1 Query: 151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K+ EK A+ DA G E +++ + E DEE+EE EEEE+EE + EEED Sbjct: 43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEGDGEEED 222 Query: 211 DDD----E 214 D+ E Sbjct: 223 GDEDEEAE 246 Score = 82 (28.9 bits), Expect = 0.15, P = 0.14 Identities = 22/59 (37%), Positives = 35/59 (59%), Frame = +1 Query: 160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE------EEDDDD 213 A G+ +A + V E+ + +EEEE+E D E+E+ +EDEE E E+D+DD Sbjct: 115 ANEENGEQEADNE--VDEEEEEGGEEEEEEEGDGEEEDGDEDEEAETATGKRAAEDDEDD 288 Query: 214 E 214 + Sbjct: 289 D 291 >U08273 Rattus norvegicus Wistar polymeric immunoglobulin receptor (PIGR) Length = 999 Plus Strand HSPs: Score = 133 (46.8 bits), Expect = 9.8e-06, P = 9.8e-06 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + +++KEEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 428 RRRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 544 Score = 132 (46.5 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + ++K+EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 431 RRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 547 Score = 131 (46.1 bits), Expect = 1.8e-05, P = 1.8e-05 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + +K++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 434 RRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 550 Score = 130 (45.8 bits), Expect = 2.3e-05, P = 2.3e-05 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + K+++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 437 RRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 553 Score = 127 (44.7 bits), Expect = 5.5e-05, P = 5.5e-05 Identities = 20/39 (51%), Positives = 36/39 (92%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 440 RRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 556 Score = 126 (44.4 bits), Expect = 7.5e-05, P = 7.5e-05 Identities = 19/39 (48%), Positives = 36/39 (92%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + + +++++EEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 425 RRRRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 541 Score = 123 (43.3 bits), Expect = 0.00018, P = 0.00017 Identities = 21/35 (60%), Positives = 33/35 (94%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 452 KEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 556 Score = 117 (41.2 bits), Expect = 0.00093, P = 0.00093 Identities = 20/32 (62%), Positives = 31/32 (96%), Frame = +2 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE Sbjct: 461 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 556 Score = 111 (39.1 bits), Expect = 0.0048, P = 0.0048 Identities = 22/60 (36%), Positives = 42/60 (70%), Frame = +1 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 +K+ K I Y +P + +V ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++ Sbjct: 262 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 438 Score = 110 (38.7 bits), Expect = 0.0063, P = 0.0063 Identities = 18/35 (51%), Positives = 32/35 (91%), Frame = +1 Query: 180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 SKK++E+EE E++EE EE+++EE+E+EEE++++E Sbjct: 331 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEE 435 Score = 108 (38.0 bits), Expect = 0.011, P = 0.011 Identities = 22/61 (36%), Positives = 44/61 (72%), Frame = +1 Query: 152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 +K+ K I Y +P A + + ++K ++K+E+E++EE E+++EEE+EE+E+EEE++ Sbjct: 262 QKF-KVILGYLVSVRP-AWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEE 435 Query: 212 D 212 + Sbjct: 436 E 438 Score = 107 (37.7 bits), Expect = 0.014, P = 0.014 Identities = 21/46 (45%), Positives = 36/46 (78%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED-------DDDE 214 K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ ++ + Sbjct: 452 KEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEIEIRRRKEEGQ 589 Score = 106 (37.3 bits), Expect = 0.019, P = 0.019 Identities = 16/36 (44%), Positives = 33/36 (91%), Frame = +1 Query: 179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +++KEE+E EE++ +E++EE+EE+E+EEE+++++ Sbjct: 334 KKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEK 441 Score = 106 (37.3 bits), Expect = 0.019, P = 0.019 Identities = 18/37 (48%), Positives = 31/37 (83%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E KK+EE+E++E EE++ EE+ EE+E+EEE++++E Sbjct: 322 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEE 432 Score = 104 (36.6 bits), Expect = 0.033, P = 0.032 Identities = 18/32 (56%), Positives = 29/32 (90%), Frame = +1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 EK ++++EEE+ EE +E+EEEEE+EE+E+EE+ Sbjct: 346 EKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEK 441 >Z69727 S.pombe chromosome I cosmid c4G9. Length = 40,915 Minus Strand HSPs: Score = 125 (44.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05 Identities = 36/124 (29%), Positives = 63/124 (50%), Frame = -3 Query: 54 KEKGKFEDMAKADKARYEREMKTYIPPK--GETKKKFKD-------------PNAPKRPP 98 K K K ++ A+K R+ ++++ P + E +++ K+ P+ PK+P Sbjct: 22691 KYKNKLQEQFDAEKKRFMETLRSFTPTEIDSENRRRSKEAHSTGSRYYRLRHPDVPKKPS 22512 Query: 99 SAFFLFCSEYR--PKIKGEH--P-GLS-IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 152 SAF LF E R PK++ E P +S + + + + W A D K+P+ K+ LKE Sbjct: 22511 SAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKE 22332 Query: 153 KYEK 156 +Y+K Sbjct: 22331 QYDK 22320 Score = 85 (29.9 bits), Expect = 0.10, Sum P(3) = 0.096 Identities = 23/72 (31%), Positives = 38/72 (52%), Frame = -3 Query: 5 PKKPRGKMSSYAFFVQTCREEHKKKH----PDASVNFSEFSKKCSERWKTMSAKEKGKFE 60 PKKP S++ F + R K + P+A E ++ S+ WK ++ +K F Sbjct: 22526 PKKPS---SAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFI 22356 Query: 61 DMAKADKARYEREMK 75 D +KA K +Y++ MK Sbjct: 22355 DKSKALKEQYDKFMK 22311 Score = 60 (21.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05 Identities = 15/45 (33%), Positives = 24/45 (53%), Frame = -2 Query: 174 VVKAEKSKKKKEE--EE---DEEDEEDEEEEEDEEDEDEEEDDDD 213 + K K++K K E+ D +DEED+ + +D E +D DD Sbjct: 9078 ITKTNKNRKGKGRAIEDLIPDIDDEEDDVDFQDLSSSGESDDSDD 8944 Score = 60 (21.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05 Identities = 17/51 (33%), Positives = 27/51 (52%), Frame = -2 Query: 166 KPDAAKKGVVKA-EKSKKKKEEEEDEEDEED--EEEEEDEEDEDEEEDDDD 213 K + +KG +A E ++EED+ D +D E D+ D+ +ED DD Sbjct: 9072 KTNKNRKGKGRAIEDLIPDIDDEEDDVDFQDLSSSGESDDSDDSMQEDYDD 8920 Score = 57 (20.1 bits), Expect = 0.10, Sum P(3) = 0.096 Identities = 16/46 (34%), Positives = 24/46 (52%), Frame = -3 Query: 115 EHPGLSIGDVAKKLGEMWNNTAADD--KQPYEKKAAKLKEKYEKDI 158 E GL G+ KK+ ++ + D KQP+ K KLK K K++ Sbjct: 18599 EKGGLINGETKKKISSIYLDREYDGLMKQPWVKYGTKLKIKEIKEL 18462 Score = 48 (16.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05 Identities = 8/23 (34%), Positives = 13/23 (56%), Frame = -2 Query: 36 NFSEFSKKCSERWKTMSAKEKGK 58 N S+ SK +RW+ + KG+ Sbjct: 28137 NLSKLSKPSKQRWQKSPVRPKGR 28069 Score = 47 (16.5 bits), Expect = 0.00021, Sum P(3) = 0.00021 Identities = 9/15 (60%), Positives = 11/15 (73%), Frame = -1 Query: 198 EEEDEEDEDEEEDDD 212 EE ED+ EEED+D Sbjct: 8752 EEGQNEDDFEEEDED 8708 Score = 47 (16.5 bits), Expect = 0.00021, Sum P(3) = 0.00021 Identities = 9/33 (27%), Positives = 21/33 (63%), Frame = -1 Query: 174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206 ++ + ++++KK + +E E++ +EEDED Sbjct: 8806 IMCSTRTRRKKIDFTKVLEEGQNEDDFEEEDED 8708 Score = 44 (15.5 bits), Expect = 0.00040, Sum P(3) = 0.00040 Identities = 7/15 (46%), Positives = 12/15 (80%), Frame = -1 Query: 199 EEDEEDEDEEEDDDD 213 EE + ++D EE+D+D Sbjct: 8752 EEGQNEDDFEEEDED 8708 Score = 43 (15.1 bits), Expect = 0.00050, Sum P(3) = 0.00050 Identities = 7/15 (46%), Positives = 13/15 (86%), Frame = -1 Query: 197 EEEEDEEDEDEEEDD 211 EE ++E+D +EE++D Sbjct: 8752 EEGQNEDDFEEEDED 8708 Score = 42 (14.8 bits), Expect = 0.00063, Sum P(3) = 0.00063 Identities = 7/15 (46%), Positives = 12/15 (80%), Frame = -1 Query: 194 EDEEEEEDEEDEDEE 208 E+ + E+D E+EDE+ Sbjct: 8752 EEGQNEDDFEEEDED 8708 Score = 40 (14.1 bits), Expect = 0.00099, Sum P(3) = 0.00099 Identities = 8/15 (53%), Positives = 13/15 (86%), Frame = -1 Query: 197 EEEEDEED-EDEEED 210 EE ++E+D E+E+ED Sbjct: 8752 EEGQNEDDFEEEDED 8708 >M60665 Rat prothymosin-alpha mRNA, 5' end. Length = 446 Plus Strand HSPs: Score = 117 (41.2 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 26/65 (40%), Positives = 37/65 (56%), Frame = +3 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 LKEK K++ G+ A E +++ + E DEE+EE EEEE+EE+ D EE Sbjct: 234 LKEK--KEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 407 Query: 210 DDDDE 214 +D DE Sbjct: 408 EDGDE 422 Score = 108 (38.0 bits), Expect = 0.00013, P = 0.00013 Identities = 27/66 (40%), Positives = 39/66 (59%), Frame = +3 Query: 150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED-EEEEEDEEDEDEE 208 LKEK K++ G+ A E +++ + E DEE+EE EEEEE+EE + EE Sbjct: 234 LKEK--KEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 407 Query: 209 ED--DDDE 214 ED +D+E Sbjct: 408 EDGDEDEE 431 Score = 98 (34.5 bits), Expect = 0.027, P = 0.027 Identities = 25/81 (30%), Positives = 42/81 (51%), Frame = +3 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYR---AKGKPDAAKKGVVKAEKSKKKKEEEED 189 ++ A D K K K++ ++ R A G + G +A+ ++EEE Sbjct: 189 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGG 368 Query: 190 EEDEEDEEEEEDEEDEDEEED 210 EE+EE+EE + +EED DE+E+ Sbjct: 369 EEEEEEEEGDGEEEDGDEDEE 431 >U95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete Length = 192,730 Plus Strand HSPs: Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 28/66 (42%), Positives = 43/66 (65%), Frame = +1 Query: 145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204 KK K K K+++ R K K ++ + EK KKKKEEEE+EE+EE+EE++ +D Sbjct: 89611 KKKRKNKRKWKRRKRKRRKKRKERKEREEEEEKEKKKKKKEEEEEEEEEEEEEDKNKRKD 89790 Query: 205 EDEEED 210 ++EEE+ Sbjct: 89791 KEEEEE 89808 Score = 117 (41.2 bits), Expect = 0.0018, P = 0.0018 Identities = 25/80 (31%), Positives = 49/80 (61%), Frame = +1 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 T + K EK+ + +E+ + R K + + K K ++ KK+KE +E EE+EE Sbjct: 89527 TKSKAKTEKEKERERERERERRKRKRERKKKRKNKRKWKRRKRKRRKKRKERKEREEEEE 89706 Query: 195 DEEEEEDEEDEDEEEDDDDE 214 E++++ +E+E+EEE++++E Sbjct: 89707 KEKKKKKKEEEEEEEEEEEE 89766 Score = 117 (41.2 bits), Expect = 0.0018, P = 0.0018 Identities = 24/80 (30%), Positives = 51/80 (63%), Frame = +1 Query: 135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194 T + ++ E++ + K K E+ + K K ++ + +K K++KE EE+EE E+ Sbjct: 89545 TEKEKERERERERERRKRKRERK---KKRKNKRKWKRRKRKRRKKRKERKEREEEEEKEK 89715 Query: 195 DEEEEEDEEDEDEEEDDDDE 214 ++++E+EE+E+EEE+++D+ Sbjct: 89716 KKKKKEEEEEEEEEEEEEDK 89775 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011 Identities = 21/48 (43%), Positives = 35/48 (72%), Frame = +3 Query: 165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 G+ + +G + E+ +++ EEEE+EE EE EEEEE+EE+E+E E+ + Sbjct: 89547 GEGEGEGEGEGEGEEEEEEGEEEEEEEQEEVEEEEEEEEEEEEGEEGE 89690 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070 Identities = 19/42 (45%), Positives = 32/42 (76%), Frame = +3 Query: 173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 G + E + + EEE+EE EE+EEEE++E +E+EEE++++E Sbjct: 89547 GEGEGEGEGEGEGEEEEEEGEEEEEEEQEEVEEEEEEEEEEE 89672 Score = 93 (32.7 bits), Expect = 1.6, Sum P(2) = 0.79 Identities = 25/83 (30%), Positives = 42/83 (50%), Frame = +2 Query: 132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191 W T D + +KK K K + K+ R K K KK K E+ +K+KE E + Sbjct: 116801 WE-TEQDSVKKKKKKERKRKRERRKEGRGKRKKNKE--RKKERKKKERKRKRKESNEGRK 116971 Query: 192 DEEDEEEEEDEEDEDEEEDDDDE 214 + E +EEE ++++ +E++ E Sbjct: 116972 EGERKEEERKKKEKRKEKEGRKE 117040 Score = 55 (19.4 bits), Expect = 1.6, Sum P(2) = 0.79 Identities = 22/81 (27%), Positives = 36/81 (44%), Frame = +2 Query: 24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83 +E K+ +AS S+ ++ +ER K KE+ K + K + ERE + K E Sbjct: 94028 KEMKEMQKEASKQGSKQDRQ-TERRKERKKKERKKERERKKEREKEREREREK--ERKKE 94198 Query: 84 TKKKFKDPNAPKRPPSAFFLF 104 KK+ K R + F + Sbjct: 94199 RKKERKKERVQNRLSNRAFCY 94261 Score = 51 (18.0 bits), Expect = 3.8, Sum P(2) = 0.98 Identities = 19/71 (26%), Positives = 30/71 (42%), Frame = +1 Query: 23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82 R E K + + + + ER K KE+ + ++ + K ERE K K Sbjct: 94030 RNERNAKGSKQTRKQARQTDRKKEREKEERKKERERKKERKRERKRERERERKK--ERKK 94203 Query: 83 ETKKKFKDPNA 93 E KK+ K P + Sbjct: 94204 ERKKERKSPKS 94236 Score = 44 (15.5 bits), Expect = 0.00018, Sum P(2) = 0.00018 Identities = 7/15 (46%), Positives = 12/15 (80%), Frame = +3 Query: 83 ETKKKFKDPNAPKRP 97 ETK+ +K+PN ++P Sbjct: 35181 ETKRFYKNPNLAQKP 35225 Score = 41 (14.4 bits), Expect = 0.00036, Sum P(2) = 0.00036 Identities = 7/9 (77%), Positives = 8/9 (88%), Frame = +1 Query: 96 RPPSAFFLF 104 RPP+ FFLF Sbjct: 49384 RPPALFFLF 49410 >X69986 R.norvegicus gene for GABAA receptor delta subunit Length = 3500 Plus Strand HSPs: Score = 134 (47.2 bits), Expect = 1.4e-05, P = 1.4e-05 Identities = 26/58 (44%), Positives = 42/58 (72%), Frame = +1 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 E++ R + + + KK K K +K+EEEE+EE+EE+EEEEE+EE+E+EEE+++ Sbjct: 931 EREREREREREREEEGKK---KGRKEGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1095 Score = 127 (44.7 bits), Expect = 9.9e-05, P = 9.9e-05 Identities = 26/59 (44%), Positives = 43/59 (72%), Frame = +1 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 E++ R + + + KK K K + +KEEEE+EE+EE+EEEEE+EE+E+EEE++++ Sbjct: 931 EREREREREREREEEGKK---KGRK-EGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1095 Score = 126 (44.4 bits), Expect = 0.00013, P = 0.00013 Identities = 24/43 (55%), Positives = 36/43 (83%), Frame = +1 Query: 168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210 + KKG + E K+++EEEE+EE+EE+EEEEE+EE+E+EEE+ Sbjct: 973 EGKKKG--RKEGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1095 Score = 126 (44.4 bits), Expect = 0.00013, P = 0.00013 Identities = 27/60 (45%), Positives = 42/60 (70%), Frame = +1 Query: 155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E++ R + + + KK K K +K+EEEE+EE+EE+EEEEE+EE+E+EEE++ E Sbjct: 931 EREREREREREREEEGKK---KGRKEGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE--E 1095 Score = 93 (32.7 bits), Expect = 0.88, P = 0.58 Identities = 20/39 (51%), Positives = 29/39 (74%), Frame = +1 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + E+ KKK +E +E+EE+EEEEE+EE+E+EEE E Sbjct: 964 REEEGKKKGRKEGRKEEEEEEEEEEEEEEEEEEE----E 1068 Score = 92 (32.4 bits), Expect = 1.1, P = 0.68 Identities = 17/42 (40%), Positives = 32/42 (76%), Frame = +1 Query: 178 EKSKKKKEEEEDE-----EDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++ EEE + E ++EEEEE+EE+E+EEE++++E Sbjct: 943 EREREREREEEGKKKGRKEGRKEEEEEEEEEEEEEEEEEEEE 1068 Score = 85 (29.9 bits), Expect = 3.8, Sum P(2) = 0.98 Identities = 17/32 (53%), Positives = 22/32 (68%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207 K EK ++KKEEEE+EED+ EE E E +E Sbjct: 1176 KKEKKERKKEEEEEEEDDRGEERGERRERGEE 1271 Score = 84 (29.6 bits), Expect = 5.0, Sum P(2) = 0.99 Identities = 18/35 (51%), Positives = 23/35 (65%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEE-EEDEEDEDEEE 209 K EK ++KKEEEE+EED+ EE E E E+ E Sbjct: 1176 KKEKKERKKEEEEEEEDDRGEERGERRERGEERGE 1280 Score = 83 (29.2 bits), Expect = 6.4, Sum P(2) = 1.0 Identities = 16/34 (47%), Positives = 24/34 (70%), Frame = +3 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209 K +K KK++++EE+EE+E+D EE E E EE Sbjct: 1170 KKKKEKKERKKEEEEEEEDDRGEERGERRERGEE 1271 Score = 44 (15.5 bits), Expect = 3.8, Sum P(2) = 0.98 Identities = 12/44 (27%), Positives = 22/44 (50%), Frame = +2 Query: 46 ERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFK 89 ER + +++G+ E K K + +++ K K + KKK K Sbjct: 959 ERERKKERRKEGRKEGRKKKKKKKKKKKKKKKKKKKKKKKKKKK 1090 >X07453;X66268 Plasmodium falciparum 11-1 gene part 1 Length = 4630 Plus Strand HSPs: Score = 134 (47.2 bits), Expect = 1.4e-05, P = 1.4e-05 Identities = 56/200 (28%), Positives = 90/200 (45%), Frame = +2 Query: 25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMK-TYI-PPK 81 + K + VN + +K + K + KEK + E D K ++ + +RE K +Y+ K Sbjct: 1127 KRKSRRKKVKVNLKDNLEKREGKMKRRNKKEKRRKEKDNKKMNELKLKREYKESYLLDNK 1306 Query: 82 GET----KKKFKDPNAPKRP--PSA--FFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 + KF K P++ +FL Y + KG I + ++ + Sbjct: 1307 SDMDVIRNDKFSYFTLYKNNLFPNSNNYFLHMLKTYDEENKGIDENTDINENVEENEYVD 1486 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 NT D K E K E + +A + G + K + K K+ +D++D Sbjct: 1487 KNTEGD-KDGVEDKGGGENEGGDGHGSAGDSAGGDRGGDENKDKDNEENKDKKGNKDDDD 1663 Query: 193 EEDEEEEEDEEDEDEEEDDDDE 214 EE+EEEEED+E E EE+DD DE Sbjct: 1664 EEEEEEEEDDE-EKEEKDDKDE 1726 Score = 130 (45.8 bits), Expect = 4.4e-05, P = 4.4e-05 Identities = 54/203 (26%), Positives = 92/203 (45%), Frame = +2 Query: 25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMK-TYI-PPK 81 + K + VN + +K + K + KEK + E D K ++ + +RE K +Y+ K Sbjct: 1127 KRKSRRKKVKVNLKDNLEKREGKMKRRNKKEKRRKEKDNKKMNELKLKREYKESYLLDNK 1306 Query: 82 GET----KKKFKDPNAPKRP--PSA--FFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132 + KF K P++ +FL Y + KG I + ++ + Sbjct: 1307 SDMDVIRNDKFSYFTLYKNNLFPNSNNYFLHMLKTYDEENKGIDENTDINENVEENEYVD 1486 Query: 133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192 NT D K E K E + +A + G + K + K K+ +D++D Sbjct: 1487 KNTEGD-KDGVEDKGGGENEGGDGHGSAGDSAGGDRGGDENKDKDNEENKDKKGNKDDDD 1663 Query: 193 EEDEEEEEDEEDEDEEEDDD--DE 214 EE+EEEEED+E+++E++D D DE Sbjct: 1664 EEEEEEEEDDEEKEEKDDKDEKDE 1735 Score = 110 (38.7 bits), Expect = 0.010, P = 0.010 Identities = 17/39 (43%), Positives = 33/39 (84%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 K +K K ++EE+EE+EED+EE+E+++D+DE+++ D++ Sbjct: 1631 KDKKGNKDDDDEEEEEEEEDDEEKEEKDDKDEKDEKDEK 1747 Score = 110 (38.7 bits), Expect = 0.010, P = 0.010 Identities = 20/41 (48%), Positives = 33/41 (80%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE--EEDDDDE 214 K +K K ++EE+EE+EED+EE+E+++D+DE E+D+ DE Sbjct: 1631 KDKKGNKDDDDEEEEEEEEDDEEKEEKDDKDEKDEKDEKDE 1753 Score = 106 (37.3 bits), Expect = 0.030, P = 0.030 Identities = 20/41 (48%), Positives = 31/41 (75%), Frame = +2 Query: 176 KAEKSKKKKEEEEDEEDEEDEEEEED--EEDEDEEEDDDDE 214 K K +EEEE+EED+E++EE++D E+DE +E+D+ DE Sbjct: 1640 KGNKDDDDEEEEEEEEDDEEKEEKDDKDEKDEKDEKDEKDE 1762 Score = 93 (32.7 bits), Expect = 0.90, P = 0.59 Identities = 30/95 (31%), Positives = 53/95 (55%), Frame = +2 Query: 114 GEHPGLSIGDVA--KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171 G+ G S GD A + G+ N D+++ +KK K + E++ + K + Sbjct: 1547 GDGHG-SAGDSAGGDRGGD--ENKDKDNEENKDKKGNKDDDDEEEEEEEEDDEEKEEKDD 1717 Query: 172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208 K K EK +K +++E+DE+DE+DE+ E+DE +E+ Sbjct: 1718 KDE-KDEKDEKDEKDEKDEKDEKDEKGEKDESKGEEK 1825 >D14636 Mouse mRNA for PEBP2a1 protein, complete cds. Length = 6518 Minus Strand HSPs: Score = 134 (47.2 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 23/44 (52%), Positives = 39/44 (88%), Frame = -1 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 +KG K + ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5435 RKGDFKP*EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5304 Score = 133 (46.8 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 22/36 (61%), Positives = 35/36 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++DD Sbjct: 5348 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDD 5241 Score = 133 (46.8 bits), Expect = 2.0e-05, P = 2.0e-05 Identities = 25/55 (45%), Positives = 44/55 (80%), Frame = -1 Query: 162 RAKG--KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 + KG KP ++ + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5438 KRKGDFKP*EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5274 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5381 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5271 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5378 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5268 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5375 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5265 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5372 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5262 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5369 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5259 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5366 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5256 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5363 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5253 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5360 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5250 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5357 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5247 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = -1 Query: 178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++++ Sbjct: 5354 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 5244 Score = 120 (42.2 bits), Expect = 0.00073, P = 0.00073 Identities = 20/30 (66%), Positives = 30/30 (100%), Frame = -1 Query: 185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 EEEE+EE+EE+EEEEE+EE+E+EEE++++E Sbjct: 5411 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5322 >A42910 Sequence 42 from Patent WO9502701. Length = 275 Plus Strand HSPs: Score = 118 (41.5 bits), Expect = 1.5e-05, P = 1.5e-05 Identities = 21/50 (42%), Positives = 35/50 (70%), Frame = +3 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211 R +G+ + + G + K ++KKE E + E E +EEEEE+EE+E+EEE++ Sbjct: 126 RKEGRKEGRQVGRQEERKKERKKEREREREREREEEEEEEEEEEEEEEEE 275 Score = 115 (40.5 bits), Expect = 3.4e-05, P = 3.4e-05 Identities = 24/54 (44%), Positives = 39/54 (72%), Frame = +3 Query: 162 RAKGKPDAAKKG--VVKAEKSKK-KKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212 R +G+ + K+G V + E+ KK +K+E E E + E EEEEE+EE+E+EEE+++ Sbjct: 114 RKEGRKEGRKEGRQVGRQEERKKERKKEREREREREREEEEEEEEEEEEEEEEE 275 Score = 106 (37.3 bits), Expect = 0.00036, P = 0.00036 Identities = 22/50 (44%), Positives = 34/50 (68%), Frame = +3 Query: 162 RAKGKPDAAKKGVVKAEKSKKKKEEE---EDEEDEEDEEEEEDEEDEDEE 208 R +G+ + + G + K ++KKE E E E +EE+EEEEE+EE+E+EE Sbjct: 126 RKEGRKEGRQVGRQEERKKERKKEREREREREREEEEEEEEEEEEEEEEE 275 >AF025664 Bos taurus Na-Ca+K exchanger (BOSNCKX) mRNA, partial cds. Length = 1576 Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05 Identities = 29/104 (27%), Positives = 57/104 (54%), Frame = +3 Query: 111 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170 ++KG+ + G+ + GE +D+ + E E+++ A +G+ Sbjct: 558 EVKGDEGEIQAGEAGEVEGEDGEVEGGEDEGEIQAGEGGEGETGEQELNA-EIQGEAKDD 734 Query: 171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214 ++GV E+E+EEDEE+E+EEE+EE+E+EEE+++++ Sbjct: 735 EEGVDGEGGGDGGDSEDEEEEDEEEEDEEEEEEEEEEEEEENEQ 866 Score = 44 (15.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05 Identities = 17/54 (31%), Positives = 25/54 (46%), Frame = +1 Query: 47 RWKTMSAKEK------GKFEDMAKADKARYERE-----MKTYIPPKGETKKKFK 89 +WK M K K GK++ M K+R E+ MKT + + E K+K Sbjct: 304 KWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKVGKWK 465 Score = 44 (15.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05 Identities = 17/54 (31%), Positives = 25/54 (46%), Frame = +1 Query: 47 RWKTMSAKEK------GKFEDMAKADKARYERE-----MKTYIPPKGETKKKFK 89 +WK M K K GK++ M K+R E+ MKT + + E K+K Sbjct: 355 KWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKLGKWK 516 Score = 42 (14.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05 Identities = 12/35 (34%), Positives = 18/35 (51%), Frame = +1 Query: 47 RWKTMSAKEK------GKFEDMAKADKARYEREMK 75 +WK M K K GK++ M K+R E+ +K Sbjct: 457 KWKVMKTKVKSRQEKLGKWKVMKTKVKSRQEKVVK 561 WARNING: HSPs involving 1888 database sequences were not reported due to the limiting value of parameter B = 250. Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.304 0.127 0.357 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 214 214 10. 78 3 13 23 0.059 38 31 0.068 40 Statistics: Database: /dbEST1/wublast/database/embl/embl.fas Title: embl Release date: unknown Posted date: 12:04 PM GMT Feb 21, 2000 Format: BLAST # of letters in database: 675,252,082 # of sequences in database: 442,729 # of database sequences satisfying E: 2138 No. of states in DFA: 446 (48 KB) Total size of DFA: 68 KB (128 KB) Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 391.98u 1.82s 393.80t Elapsed: 00:03:30 Total cpu time: 392.97u 1.98s 394.95t Elapsed: 00:03:32 Start: Mon Feb 21 12:14:11 2000 End: Mon Feb 21 12:17:43 2000 WARNINGS ISSUED: 2