//=====================================================================
// File: PeakMgr.java
// Class: PeakMgr
// Package: AFLPcore
//
// Author: James J. Benham
// Date: August 10, 1998
// Contact: james_benham@hmc.edu
//
// Genographer v1.0 - Computer assisted scoring of gels.
// Copyright (C) 1998 Montana State University
//
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; version 2
// of the License.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU General Public License
// along with this program; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
//
// The GNU General Public License is distributed in the file GPL
//=====================================================================
package AFLPcore;
/**
* This class contains a list of PeakLocate
s which can be used
* to find peaks in the lanes/gel. Each one will implement a different
* algorithm for finding the peaks. Each filter is associated with a
* String
, which represents its name. The pairing features are
* inherited from the Manager
class.
*
*
The filters can be retrieved based on their name, and a lists of
* names can be obtained from the PeakMgr. The PeakLocate will contain
* addtional information about how it works.
*
* @see PeakLocate
* @see Manager
*
* @author James J. Benham
* @version 1.0.0
* @date August 10, 1998
*/
public class PeakMgr extends Manager
{
/**
* Creates a new PeakMgr, with a default capacity of 4 and a
* loadFactor of 1.0. Sets up the Hashtable for the String/PeakLocate
* pairs.
*/
public PeakMgr()
{
super();
}
/**
* Creates a new PeakMgr with the specified values.
*
* @param capacity the initial number of filters that can be stored.
* @param loadFactor controls memory efficiency vs. lookup speed, it
* must be between 0.0 and 1.0, where 1.0 has the greatest memory efficiency
*
* @exception IllegalArgumentException when capacitly
is less
* than zero or the loadFactor
is out of bounds.
*/
public PeakMgr(int capacity, float loadFactor)
throws IllegalArgumentException
{
super(capacity, loadFactor);
}
/**
* Checks to see if the specified operation is a PeakLocate
.
*
* @return true
if it is, false
if
* it is not.
*
* @see PeakLocate
*/
public boolean classTypeOk(Operation op)
{
return(op instanceof PeakLocate);
}
}