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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| DE_graph_to_dot.pl | 2023-02-05 12:46 | 1.0K | |
| DTE_to_DTU.pl | 2023-02-05 12:46 | 3.8K | |
| GOplot.Rscript | 2023-02-05 12:46 | 2.9K | |
| Glimma.Trinity.Rscript | 2023-02-05 12:46 | 3.1K | |
| PtR | 2023-02-05 12:46 | 87K | |
| R/ | 2023-02-05 12:46 | - | |
| ROKU.pl | 2023-02-05 12:46 | 875 | |
| TissueEnrichment/ | 2023-02-05 12:46 | - | |
| add_annot_to_trans_i..> | 2023-02-05 12:46 | 1.7K | |
| add_annotations_to_G..> | 2023-02-05 12:46 | 2.7K | |
| add_blastx_hit_to_tr..> | 2023-02-05 12:46 | 1.0K | |
| analyze_diff_expr.pl | 2023-02-05 12:46 | 19K | |
| assign_tissue_specif..> | 2023-02-05 12:46 | 1.0K | |
| cluster_sample_data/ | 2023-02-05 12:46 | - | |
| compare_gene_trans_D..> | 2023-02-05 12:46 | 5.8K | |
| cut_tree_into_cluste..> | 2023-02-05 12:46 | 3.7K | |
| define_clusters_by_c..> | 2023-02-05 12:46 | 6.6K | |
| deprecated/ | 2023-02-05 12:46 | - | |
| diff_expr_analysis_t..> | 2023-02-05 12:46 | 3.8K | |
| diff_express.cgi | 2023-02-05 12:46 | 5.9K | |
| downsample_count_mat..> | 2023-02-05 12:46 | 3.2K | |
| extract_GO_enriched_..> | 2023-02-05 12:46 | 3.8K | |
| filter_diff_expr.pl | 2023-02-05 12:46 | 1.0K | |
| filter_matrix_min_su..> | 2023-02-05 12:46 | 518 | |
| get_tissue_enriched_..> | 2023-02-05 12:46 | 1.8K | |
| get_transcript_lengt..> | 2023-02-05 12:46 | 519 | |
| identify_diff_isofor..> | 2023-02-05 12:46 | 6.3K | |
| log2_transform_matri..> | 2023-02-05 12:46 | 957 | |
| log2_transform_media..> | 2023-02-05 12:46 | 1.0K | |
| matrix_to_gene_plots.pl | 2023-02-05 12:46 | 2.9K | |
| merge_matrices.pl | 2023-02-05 12:46 | 2.2K | |
| merge_subclusters.pl | 2023-02-05 12:46 | 494 | |
| pairwise_summaries/ | 2023-02-05 12:46 | - | |
| plot_all_DE_MAplots...> | 2023-02-05 12:46 | 932 | |
| plot_all_DE_volcanos..> | 2023-02-05 12:46 | 934 | |
| plot_expression_patt..> | 2023-02-05 12:46 | 3.1K | |
| plot_log2FC_hist.Rsc..> | 2023-02-05 12:46 | 239 | |
| prune_isoforms_fasta.pl | 2023-02-05 12:46 | 8.5K | |
| prune_isoforms_gtf.pl | 2023-02-05 12:46 | 1.9K | |
| rank_roku_by_expr.pl | 2023-02-05 12:46 | 1.2K | |
| remove_batch_effects..> | 2023-02-05 12:46 | 3.3K | |
| rename_matrix_column..> | 2023-02-05 12:46 | 1.3K | |
| rename_matrix_featur..> | 2023-02-05 12:46 | 1.3K | |
| replicates_to_sample..> | 2023-02-05 12:46 | 4.5K | |
| run_DE_analysis.pl | 2023-02-05 12:46 | 29K | |
| run_GOseq.pl | 2023-02-05 12:46 | 9.9K | |
| run_TMM_normalizatio..> | 2023-02-05 12:46 | 6.9K | |
| stratify_diff_expres..> | 2023-02-05 12:46 | 838 | |
| subcluster_to_canvas..> | 2023-02-05 12:46 | 537 | |
| subcluster_to_canvas..> | 2023-02-05 12:46 | 3.6K | |
| summarize_diff_expr_..> | 2023-02-05 12:46 | 1.4K | |
| validate_UP_subset.R..> | 2023-02-05 12:46 | 1.6K | |