Filter blast results


1) Menu "Filter & Sort " click on "Main Filter"



Filter settings:



Filters Types Documentation



% min of alignment coverage 0.0 to 100.0 % Set the minimum alignment coverage percentage



% min of Identity 0.0 to 100.0 % Set the minimum Identity percentage



The choice box
The above parameters are applied to the either to query or to the subject separately or to the query and/or the subject



Set the E value cut off real number You set the E value to the maximum



# max of HITS/query to keep (0=all) Integer You can choose to keep all filtered hits by setting the value to 0 or keep only the number of best hits



min. len. of the alignment (0=no limit) Integer You can set the minimum length of the alignment



include no match
If the parameter is set it keeps also the queries without any match in the blast database



include the HSPs
If the parameter is set it keeps also all HSPs for a given Hit



skip Hits when Query. ID equal Subject ID
It's used for example when a query set is "Blasted" against itself or the query definition is included in the blast database


Used for example when a query set is “Blasted” against itself or the query definition is included in the blast database



Sort by alignment Descendant
You can choose to sort the hits for a given query taking the largest alignment first




Click 'Filter Evaluation' to validate your filters

and click 'Return to main' when you have finish.