Index of /~psgendb/birchhomedir/BIRCHDEV/public_html/doc/local/pkg/brassica_rnaseq_scripts/programs/picard

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory   -  
[ ]ViewSam.jar 2014-03-25 10:25 919K 
[ ]ValidateSamFile.jar 2014-03-25 10:25 1.0M 
[ ]VcfFormatConverter.jar 2014-03-25 10:25 1.6M 
[ ]SplitVcfs.jar 2014-03-25 10:25 1.6M 
[ ]SortSam.jar 2014-03-25 10:25 920K 
[ ]SamToFastq.jar 2014-03-25 10:25 933K 
[ ]SamFormatConverter.jar 2014-03-25 10:25 920K 
[ ]RevertOriginalBaseQu..>2014-03-25 10:25 1.0M 
[ ]MarkIlluminaAdapters..>2014-03-25 10:25 931K 
[ ]RevertSam.jar 2014-03-25 10:25 926K 
[ ]ReplaceSamHeader.jar 2014-03-25 10:25 920K 
[ ]ReorderSam.jar 2014-03-25 10:25 937K 
[ ]QualityScoreDistribu..>2014-03-25 10:25 950K 
[ ]NormalizeFasta.jar 2014-03-25 10:25 934K 
[ ]MergeVcfs.jar 2014-03-25 10:25 1.6M 
[ ]ExtractSequences.jar 2014-03-25 10:25 942K 
[ ]MergeSamFiles.jar 2014-03-25 10:25 941K 
[ ]MergeBamAlignment.jar 2014-03-25 10:25 1.0M 
[ ]MeanQualityByCycle.jar 2014-03-25 10:25 952K 
[ ]MarkDuplicates.jar 2014-03-25 10:25 1.0M 
[ ]MakeSitesOnlyVcf.jar 2014-03-25 10:25 1.5M 
[ ]IntervalListTools.jar 2014-03-25 10:25 928K 
[ ]IlluminaBasecallsToS..>2014-03-25 10:25 1.1M 
[ ]IlluminaBasecallsToF..>2014-03-25 10:25 1.1M 
[ ]FixMateInformation.jar 2014-03-25 10:25 947K 
[ ]CheckIlluminaDirecto..>2014-03-25 10:25 1.1M 
[ ]FilterSamReads.jar 2014-03-25 10:25 932K 
[ ]FastqToSam.jar 2014-03-25 10:25 941K 
[ ]ExtractIlluminaBarco..>2014-03-25 10:25 1.1M 
[ ]EstimateLibraryCompl..>2014-03-25 10:25 937K 
[ ]DownsampleSam.jar 2014-03-25 10:25 921K 
[ ]CreateSequenceDictio..>2014-03-25 10:25 936K 
[ ]CompareSAMs.jar 2014-03-25 10:25 885K 
[ ]CollectTargetedPcrMe..>2014-03-25 10:25 1.0M 
[ ]CollectRnaSeqMetrics..>2014-03-25 10:25 1.0M 
[ ]CollectMultipleMetri..>2014-03-25 10:25 1.0M 
[ ]CollectInsertSizeMet..>2014-03-25 10:25 970K 
[ ]CollectGcBiasMetrics..>2014-03-25 10:25 953K 
[ ]CollectAlignmentSumm..>2014-03-25 10:25 968K 
[ ]CleanSam.jar 2014-03-25 10:25 970K 
[ ]CalculateHsMetrics.jar 2014-03-25 10:25 1.0M 
[ ]BuildBamIndex.jar 2014-03-25 10:25 918K 
[ ]BamToBfq.jar 2014-03-25 10:25 933K 
[ ]BamIndexStats.jar 2014-03-25 10:25 920K 
[ ]AddOrReplaceReadGrou..>2014-03-25 10:25 921K 
[ ]variant-1.110.jar 2014-03-25 10:25 578K 
[ ]tribble-1.110.jar 2014-03-25 10:25 332K 
[ ]snappy-java-1.0.3-rc..>2014-03-25 10:25 967K 
[ ]picard-1.110.jar 2014-03-25 10:25 1.8M 
[ ]commons-logging-1.1...>2014-03-25 10:25 59K 
[ ]commons-jexl-2.1.1.jar 2014-03-25 10:25 261K 
[ ]apache-ant-1.8.2-bzi..>2014-03-25 10:25 30K 
[ ]sam-1.110.jar 2014-03-25 10:25 698K 
[ ]libIntelDeflater.so 2014-03-25 10:16 465K