#ifndef INCLUDED_NJN_DYNPROGPROBPROTO #define INCLUDED_NJN_DYNPROGPROBPROTO /* $Id: $ * =========================================================================== * * PUBLIC DOMAIN NOTICE * National Center for Biotechnology Information * * This software/database is a "United States Government Work" under the * terms of the United States Copyright Act. It was written as part of * the author's offical duties as a United States Government employee and * thus cannot be copyrighted. This software/database is freely available * to the public for use. The National Library of Medicine and the U.S. * Government have not placed any restriction on its use or reproduction. * * Although all reasonable efforts have been taken to ensure the accuracy * and reliability of the software and data, the NLM and the U.S. * Government do not and cannot warrant the performance or results that * may be obtained by using this software or data. The NLM and the U.S. * Government disclaim all warranties, express or implied, including * warranties of performance, merchantability or fitness for any particular * purpose. * * Please cite the author in any work or product based on this material. * * ===========================================================================*/ /***************************************************************************** File name: njs_dynprogprobproto.hpp Author: John Spouge Contents: ******************************************************************************/ #include #include namespace Njn { class DynProgProbProto { // DynProgProbProto performs updates for probabilities in a dynamic programming computation. // The object behaves as follows: // // Default: // (1) The initial state of the dynamic programming computation is 0 with probability 1.0. // // Behavior: // (2) If input_ is the computation's input, it replaces oldValue_ with NewValueFct (oldValue_, input_) // (3) The dynamic programming function can be reset with setValueFct (...). // (4) The probability for the input can be reset with setInput (...). // (5) The probability of input_ = [0, dimInputProb_) is inputProb_ [input_]. // (6) getProb (long int i_) returns the probability corresponding to the long int value i_. public: typedef long int ValueFct (long int oldValue_, size_t input_); // function for producing new value from old value and input state virtual ~DynProgProbProto (); virtual inline operator bool () const = 0; // ? is the object ready for computation ? virtual void clear () = 0; // restarts the computation virtual void update () = 0; // updates dynamic prog probs virtual inline double getProb (long int value_) const = 0; // probability value virtual inline size_t getStep () const = 0; // current index : starts at 0 virtual inline long int getValueLower () const = 0; // present lower long int value in the array virtual inline long int getValueUpper () const = 0; // one beyond present upper long int value in the array }; } #endif