#include "CommonHelp.h" void fisher_help(void) { cerr << "\nTool: bedtools fisher (aka fisher)" << endl; cerr << "Version: " << VERSION << "\n"; cerr << "Summary: Calculate Fisher statistic b/w two feature files." << endl << endl; cerr << "Usage: " << "bedtools fisher" << " [OPTIONS] -a -b -g " << endl << endl; cerr << "Options: " << endl; cerr << "\t-m\t" << "Merge overlapping intervals before" << endl; cerr << "\t\t- looking at overlap." << endl << endl; IntersectCommonHelp(); allToolsCommonHelp(); cerr << "Notes: " << endl; cerr << "\t(1) Input files must be sorted by chrom, then start position." << endl << endl; }