/* * Bed6Interval.h * * Created on: Nov 13, 2012 * Author: nek3d */ #ifndef BED6INTERVAL_H_ #define BED6INTERVAL_H_ #include "Bed3Interval.h" class SingleLineDelimTextFileReader; class Bed6Interval : public Bed3Interval { public: friend class FreeList; Bed6Interval(); virtual bool initFromFile(SingleLineDelimTextFileReader *); virtual void print(string &outBuf) const; virtual void print(string &outBuf, int start, int end) const; virtual void print(string &outBuf, const string & start, const string & end) const; virtual void printNull(string &outBuf) const; virtual FileRecordTypeChecker::RECORD_TYPE getType() const { return FileRecordTypeChecker::BED6_RECORD_TYPE; } virtual const string &getField(int fieldNum) const; virtual int getNumFields() const { return 6; } static bool isNumericField(int fieldNum); protected: virtual ~Bed6Interval(); }; #endif /* BED6INTERVAL_H_ */