#!/bin/sh

# Get BioLegato environment variables.
if [ -f $BIRCH/admin/setblenv.profile.$BIRCH_PLATFORM.source ]
   then
      . $BIRCH/admin/setblenv.profile.$BIRCH_PLATFORM.source
fi

# This is primarily a demonstration version of BioLegato, to illustrate
# what you get if you launch BioLegato with no menus and no canvas.
# It is a little like instantiating an object of the class Object.

# Special code for text editors used by bioLegato and scripts called by bioLegato
# Nedit crashes in some Linux systems due to libraries set in BIRCHLIBS.
# nedit_wrapper unsets LD_LIBRARY_PATH before calling nedit.
# gedit opens all files in a single window. gedit_wrapper.sh forces
# gedit to open each file in different window.
# choose_edit_wrapper.sh returns the name of the wrapper to use
# for each editor, or just returns BL_TextEditor if there is no
# wrapper.
#BL_TextEditor=`choose_edit_wrapper.sh`
#export BL_TextEditor   

BIOLEGATO_HOME=$BIRCH/java/bioLegato
export BIOLEGATO_HOME


# The location of anciliary data files used by bioLegato.
BL_DATA_DIR=$BIRCH/dat/blgeneric
export BL_DATA_DIR


BL_PROPERTIES=$BL_DATA_DIR/blgeneric.properties
export BL_PROPERTIES

# The -dir switch is mainly for launching bioLegato from the birch launcher. By 
# prompting the user for a working folder, we help enforce good file organization
# habits.
if [ $# -gt 0 ]
then
   if [ ${1} = "-dir" ]
   then

      # Get rid of the -dir switch, and send the remaining command line arguments to bioLegato
      shift

      #Prompt the user to choose a working directory
      CHANGEDIR=`java -cp "$BIRCH/script" DirChooser "Where do you want to work? Choose a folder."`

      if [ -d "$CHANGEDIR" ]; then
	  cd "$CHANGEDIR"
      fi
   fi
fi

#java -Xms6M -Xmx64M -jar $BIOLEGATO_HOME/biolegato.jar $*
#java -Xms6M -Xmx96M -jar $BIOLEGATO_HOME/biolegato.jar $*
#java -Xms6M -Xmx128M -jar $BIOLEGATO_HOME/biolegato.jar $*
#java -Xms6M -Xmx256M -jar $BIOLEGATO_HOME/biolegato.jar $*
java -Xms6M -Xmx384M -jar $BIOLEGATO_HOME/image.jar $* "$BIRCH/dat/blgeneric/splash.blimg"
#java -jar $BIOLEGATO_HOME/biolegato.jar $*