#!/usr/bin/env python # Copyright 2004 by Michael Hoffman. All rights reserved. This code is # part of the Biopython distribution and governed by its license. # Please see the LICENSE file that should have been included as part # of this package. from Bio import MissingExternalDependencyError import sys if sys.platform == "win32": # Someone needs to find out if dnal works nicely on windows, # and if so where it is typically installed. raise MissingExternalDependencyError( "Don't know how to find the Wise2 tool dnal on Windows.") from Bio._py3k import getoutput not_found_types = ["command not found", "dnal: not found", "not recognized"] dnal_output = getoutput("dnal") for not_found in not_found_types: if not_found in dnal_output: raise MissingExternalDependencyError( "Install Wise2 (dnal) if you want to use Bio.Wise.")