#!/bin/bash # Wrapper for NCBI tbl2asn. Binaries from NCBI require libraries that # may not be present on all Linux systems, so we include those in the # LD_LIBRARY_PATH case $BIRCH_PLATFORM in "linux-x86_64") LD_LIBRARY_PATH="$BIRCH/lib-$BIRCH_PLATFORM/tbl2asn" export LD_LIBRARY_PATH ;; "osx-x86_64") DYLD_LIBRARY_PATH=$LD_LIBRARY_PATH export DYLD_LIBRARY_PATH #echo DYLD_LIBRARY_PATH $DYLD_LIBRARY_PATH ;; *) ;; esac ARGUMENTS=`echo $* | tr '^' '"'` echo Running tbl2asn $ARGUMENTS $BIRCH/bin-$BIRCH_PLATFORM/tbl2asn $ARGUMENTS