2022-03-22 17:13:26,058 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg
2022-03-22 17:13:26,100 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg
2022-03-22 17:13:26,132 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg
2022-03-22 17:13:26,251 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg
2022-03-22 17:13:26,313 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg
2022-03-22 17:13:28,182 [activator-1-thread-2] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1]
2022-03-22 17:13:29,148 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform:
2022-03-22 17:13:29,149 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   Region: root
2022-03-22 17:13:29,149 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -     Bundles to install:
2022-03-22 17:13:29,150 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.activation/com.springsource.javax.activation/1.1.1
2022-03-22 17:13:29,151 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:13:29,151 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/edge-bundler-impl/3.9.1
2022-03-22 17:13:29,151 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.ws.rs/javax.ws.rs-api/2.1
2022-03-22 17:13:29,152 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:13:29,152 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:13:29,152 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:13:29,152 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0
2022-03-22 17:13:29,153 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6
2022-03-22 17:13:29,153 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:commons-io/commons-io/2.1
2022-03-22 17:13:29,153 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:13:29,153 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:13:29,154 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:13:29,154 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:13:29,154 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8
2022-03-22 17:13:29,154 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:13:29,155 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8
2022-03-22 17:13:29,155 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8
2022-03-22 17:13:29,155 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:13:29,156 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:13:29,156 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:13:29,156 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:13:29,157 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8
2022-03-22 17:13:29,157 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8
2022-03-22 17:13:29,157 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:13:29,157 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8
2022-03-22 17:13:29,157 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8
2022-03-22 17:13:29,158 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8
2022-03-22 17:13:29,158 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8
2022-03-22 17:13:29,158 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1
2022-03-22 17:13:29,158 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5
2022-03-22 17:13:29,158 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:13:29,159 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:13:29,159 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:13:29,159 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:13:29,159 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/api-bundle/3.9.1
2022-03-22 17:13:29,159 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/app-impl/3.9.1
2022-03-22 17:13:29,160 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/application-impl/3.9.1
2022-03-22 17:13:29,160 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1
2022-03-22 17:13:29,160 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/cmdline/3.9.1
2022-03-22 17:13:29,160 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/cmdline-impl/3.9.1
2022-03-22 17:13:29,160 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/command-executor-impl/3.9.1
2022-03-22 17:13:29,161 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/core-task-impl/3.9.1
2022-03-22 17:13:29,161 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/custom-graphics-internal/3.9.1
2022-03-22 17:13:29,161 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1
2022-03-22 17:13:29,161 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/ding-presentation-impl/3.9.1
2022-03-22 17:13:29,161 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/editor-impl/3.9.1
2022-03-22 17:13:29,161 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-functions-impl/3.9.1
2022-03-22 17:13:29,162 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-impl/3.9.1
2022-03-22 17:13:29,162 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/event-impl/3.9.1
2022-03-22 17:13:29,162 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/filter2-impl/3.9.1
2022-03-22 17:13:29,162 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/graphml-impl/3.9.1
2022-03-22 17:13:29,163 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/group-impl/3.9.1
2022-03-22 17:13:29,163 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1
2022-03-22 17:13:29,163 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/io-impl/3.9.1
2022-03-22 17:13:29,163 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/datasource-impl/3.9.1
2022-03-22 17:13:29,163 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/jobs-impl/3.9.1
2022-03-22 17:13:29,164 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-cytoscape-impl/3.9.1
2022-03-22 17:13:29,164 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-impl/3.9.1
2022-03-22 17:13:29,164 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-prefuse-impl/3.9.1
2022-03-22 17:13:29,164 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/linkout-impl/3.9.1
2022-03-22 17:13:29,164 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/manual-layout-impl/3.9.1
2022-03-22 17:13:29,165 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/model-impl/3.9.1
2022-03-22 17:13:29,165 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/presentation-impl/3.9.1
2022-03-22 17:13:29,165 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/property-impl/3.9.1
2022-03-22 17:13:29,165 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/scripting-impl/3.9.1
2022-03-22 17:13:29,165 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/search-impl/3.9.1
2022-03-22 17:13:29,166 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/session-impl/3.9.1
2022-03-22 17:13:29,166 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1
2022-03-22 17:13:29,166 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/swing-application-impl/3.9.1
2022-03-22 17:13:29,167 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/swing-util-impl/3.9.1
2022-03-22 17:13:29,167 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-browser-impl/3.9.1
2022-03-22 17:13:29,167 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-import-impl/3.9.1
2022-03-22 17:13:29,167 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-presentation-impl/3.9.1
2022-03-22 17:13:29,168 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/third-party/3.9.1
2022-03-22 17:13:29,168 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/util-impl/3.9.1
2022-03-22 17:13:29,168 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/vizmap-impl/3.9.1
2022-03-22 17:13:29,169 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/viewmodel-impl/3.9.1
2022-03-22 17:13:29,169 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1
2022-03-22 17:13:29,169 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/vizmap-gui-impl/3.9.1
2022-03-22 17:13:29,170 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/webservice-impl/3.9.1
2022-03-22 17:13:29,170 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/work-impl/3.9.1
2022-03-22 17:13:29,170 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/work-swing-impl/3.9.1
2022-03-22 17:13:29,170 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-builtins/3.13.2
2022-03-22 17:13:29,171 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-reader/3.13.2
2022-03-22 17:13:29,171 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-terminal/3.13.2
2022-03-22 17:13:29,171 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-terminal-jansi/3.13.2
2022-03-22 17:13:29,171 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm/7.2
2022-03-22 17:13:29,172 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-commons/7.2
2022-03-22 17:13:29,172 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-tree/7.2
2022-03-22 17:13:29,172 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-analysis/7.2
2022-03-22 17:13:29,172 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-util/7.2
2022-03-22 17:13:29,172 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6
2022-03-22 17:13:29,176 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles:
2022-03-22 17:13:29,176 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.activation/com.springsource.javax.activation/1.1.1
2022-03-22 17:13:29,204 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:13:29,227 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/edge-bundler-impl/3.9.1
2022-03-22 17:13:29,250 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.ws.rs/javax.ws.rs-api/2.1
2022-03-22 17:13:29,281 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:13:29,307 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:13:29,336 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:13:29,374 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0
2022-03-22 17:13:29,397 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6
2022-03-22 17:13:29,428 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:commons-io/commons-io/2.1
2022-03-22 17:13:29,456 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:13:29,479 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:13:29,510 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:13:29,534 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:13:29,560 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8
2022-03-22 17:13:29,582 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:13:29,603 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8
2022-03-22 17:13:29,628 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8
2022-03-22 17:13:29,663 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:13:29,686 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:13:29,710 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:13:29,734 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:13:29,791 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8
2022-03-22 17:13:29,817 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8
2022-03-22 17:13:29,840 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:13:29,863 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8
2022-03-22 17:13:29,893 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8
2022-03-22 17:13:29,941 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8
2022-03-22 17:13:29,961 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8
2022-03-22 17:13:29,992 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1
2022-03-22 17:13:30,044 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5
2022-03-22 17:13:30,146 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:13:30,174 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:13:30,210 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:13:30,231 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:13:30,254 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/api-bundle/3.9.1
2022-03-22 17:13:30,299 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/app-impl/3.9.1
2022-03-22 17:13:30,375 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/application-impl/3.9.1
2022-03-22 17:13:30,401 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1
2022-03-22 17:13:30,422 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/cmdline/3.9.1
2022-03-22 17:13:30,441 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/cmdline-impl/3.9.1
2022-03-22 17:13:30,459 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/command-executor-impl/3.9.1
2022-03-22 17:13:30,548 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/core-task-impl/3.9.1
2022-03-22 17:13:30,606 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/custom-graphics-internal/3.9.1
2022-03-22 17:13:30,646 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1
2022-03-22 17:13:30,666 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/ding-presentation-impl/3.9.1
2022-03-22 17:13:30,714 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/editor-impl/3.9.1
2022-03-22 17:13:30,745 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/equations-functions-impl/3.9.1
2022-03-22 17:13:30,769 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/equations-impl/3.9.1
2022-03-22 17:13:30,805 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/event-impl/3.9.1
2022-03-22 17:13:30,830 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/filter2-impl/3.9.1
2022-03-22 17:13:30,861 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/graphml-impl/3.9.1
2022-03-22 17:13:30,883 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/group-impl/3.9.1
2022-03-22 17:13:30,910 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1
2022-03-22 17:13:30,930 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/io-impl/3.9.1
2022-03-22 17:13:30,966 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/datasource-impl/3.9.1
2022-03-22 17:13:30,988 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/jobs-impl/3.9.1
2022-03-22 17:13:31,009 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-cytoscape-impl/3.9.1
2022-03-22 17:13:31,037 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-impl/3.9.1
2022-03-22 17:13:31,057 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-prefuse-impl/3.9.1
2022-03-22 17:13:31,083 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/linkout-impl/3.9.1
2022-03-22 17:13:31,107 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/manual-layout-impl/3.9.1
2022-03-22 17:13:31,143 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/model-impl/3.9.1
2022-03-22 17:13:31,474 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/presentation-impl/3.9.1
2022-03-22 17:13:31,497 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/property-impl/3.9.1
2022-03-22 17:13:31,520 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/scripting-impl/3.9.1
2022-03-22 17:13:31,541 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/search-impl/3.9.1
2022-03-22 17:13:31,569 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/session-impl/3.9.1
2022-03-22 17:13:31,596 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1
2022-03-22 17:13:31,618 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/swing-application-impl/3.9.1
2022-03-22 17:13:31,731 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/swing-util-impl/3.9.1
2022-03-22 17:13:31,759 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-browser-impl/3.9.1
2022-03-22 17:13:31,792 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-import-impl/3.9.1
2022-03-22 17:13:32,119 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-presentation-impl/3.9.1
2022-03-22 17:13:32,181 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/third-party/3.9.1
2022-03-22 17:13:32,596 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/util-impl/3.9.1
2022-03-22 17:13:32,629 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-impl/3.9.1
2022-03-22 17:13:32,658 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/viewmodel-impl/3.9.1
2022-03-22 17:13:32,724 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1
2022-03-22 17:13:32,753 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-gui-impl/3.9.1
2022-03-22 17:13:32,793 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/webservice-impl/3.9.1
2022-03-22 17:13:32,818 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/work-impl/3.9.1
2022-03-22 17:13:32,846 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/work-swing-impl/3.9.1
2022-03-22 17:13:32,877 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-builtins/3.13.2
2022-03-22 17:13:32,916 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-reader/3.13.2
2022-03-22 17:13:32,958 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal/3.13.2
2022-03-22 17:13:32,988 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal-jansi/3.13.2
2022-03-22 17:13:33,015 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm/7.2
2022-03-22 17:13:33,050 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-commons/7.2
2022-03-22 17:13:33,085 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-tree/7.2
2022-03-22 17:13:33,129 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-analysis/7.2
2022-03-22 17:13:33,161 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-util/7.2
2022-03-22 17:13:33,196 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6
2022-03-22 17:13:34,673 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles:
2022-03-22 17:13:34,677 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.splash-updater-impl/3.9.1
2022-03-22 17:13:34,689 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.diagnostics-impl/3.9.1
2022-03-22 17:13:34,708 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm/7.2.0
2022-03-22 17:13:34,713 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree/7.2.0
2022-03-22 17:13:34,717 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.commons/7.2.0
2022-03-22 17:13:34,722 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.proxy/1.1.6
2022-03-22 17:13:34,739 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:13:34,745 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:13:34,808 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations
2022-03-22 17:13:35,041 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started
2022-03-22 17:13:35,043 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree.analysis/7.2.0
2022-03-22 17:13:35,047 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:13:35,079 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started
2022-03-22 17:13:35,081 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.util/7.2.0
2022-03-22 17:13:35,088 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:13:35,103 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:13:35,126 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.terminal/3.13.2
2022-03-22 17:13:35,133 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.reader/3.13.2
2022-03-22 17:13:35,141 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.builtins/3.13.2
2022-03-22 17:13:35,157 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.core/4.2.8
2022-03-22 17:13:35,222 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.console.osgi.Activator - Not starting local console. To activate set karaf.startLocalConsole=true
2022-03-22 17:13:35,357 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started
2022-03-22 17:13:35,357 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.features.command/4.2.8
2022-03-22 17:13:35,410 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:13:35,415 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.instance.core/4.2.8
2022-03-22 17:13:35,469 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:13:35,470 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.table/4.2.8
2022-03-22 17:13:35,478 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:13:35,497 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:13:35,520 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.system.core/4.2.8
2022-03-22 17:13:35,543 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:13:35,544 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:13:35,597 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:13:35,598 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.log.core/4.2.8
2022-03-22 17:13:35,628 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.log.core/4.2.8. Missing service: [org.apache.karaf.log.core.LogEventFormatter]
2022-03-22 17:13:35,628 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:13:35,633 [activator-1-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8
2022-03-22 17:13:35,653 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:13:35,654 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:13:35,676 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:13:35,695 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started
2022-03-22 17:13:35,696 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.service.core/4.2.8
2022-03-22 17:13:35,714 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:13:35,714 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:13:35,730 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:13:35,731 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:13:35,755 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:13:35,758 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:13:35,761 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:13:35,782 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.activation/1.1.1
2022-03-22 17:13:35,787 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:13:35,806 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:13:35,812 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:13:35,830 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:13:35,850 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:13:35,869 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.commons.io/2.1.0
2022-03-22 17:13:35,875 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.jaxb-impl/2.1.6.1
2022-03-22 17:13:35,880 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.third-party/3.9.1
2022-03-22 17:13:35,889 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   uk.ac.ebi.enfin.mi.cluster/1.6.0
2022-03-22 17:13:35,895 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.xmlbeans/2.4.0.5
2022-03-22 17:13:35,900 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   javax.ws.rs-api/2.1.0
2022-03-22 17:13:35,908 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline/3.9.1
2022-03-22 17:13:35,914 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.api-bundle/3.9.1
2022-03-22 17:13:35,924 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline-impl/3.9.1
2022-03-22 17:13:35,931 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.event-impl/3.9.1
2022-03-22 17:13:35,941 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.property.internal/3.9.1
2022-03-22 17:13:36,000 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.util-impl/3.9.1
2022-03-22 17:13:36,018 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-impl/3.9.1
2022-03-22 17:13:36,067 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io.datasource-impl/3.9.1
2022-03-22 17:13:36,083 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.application-impl/3.9.1
2022-03-22 17:13:36,095 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration
2022-03-22 17:13:36,096 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration
2022-03-22 17:13:36,114 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-util-impl/3.9.1
2022-03-22 17:13:36,174 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.model-impl/3.9.1
2022-03-22 17:13:36,585 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-swing-impl/3.9.1
2022-03-22 17:13:36,639 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-impl/3.9.1
2022-03-22 17:13:36,663 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.presentation-impl/3.9.1
2022-03-22 17:13:36,677 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.view.vizmap-impl/3.9.1
2022-03-22 17:13:36,760 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.viewmodel-impl/3.9.1
2022-03-22 17:13:36,813 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-impl/3.9.1
2022-03-22 17:13:36,828 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.group-impl/3.9.1
2022-03-22 17:13:37,013 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.session-impl/3.9.1
2022-03-22 17:13:37,027 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-core-impl/3.9.1
2022-03-22 17:13:37,038 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.custom-graphics-internal/3.9.1
2022-03-22 17:13:37,243 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.ding-presentation-impl/3.9.1
2022-03-22 17:13:37,419 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-presentation-impl/3.9.1
2022-03-22 17:13:37,481 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io-impl/3.9.1
2022-03-22 17:13:37,587 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.core-task-impl/3.9.1
2022-03-22 17:13:37,783 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.command-executor-impl/3.9.1
2022-03-22 17:13:37,855 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-application-impl/3.9.1
2022-03-22 17:13:39,488 [features-3-thread-1] WARN  org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist.
2022-03-22 17:13:39,774 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.jobs-impl/3.9.1
2022-03-22 17:13:39,846 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.linkout-impl/3.9.1
2022-03-22 17:13:39,883 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.search-impl/3.9.1
2022-03-22 17:13:39,914 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-impl/3.9.1
2022-03-22 17:13:40,366 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2
2022-03-22 17:13:40,367 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43
2022-03-22 17:13:40,728 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.filter2-impl/3.9.1
2022-03-22 17:13:41,002 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.webservice-impl/3.9.1
2022-03-22 17:13:41,104 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   edge-bundler/3.9.1
2022-03-22 17:13:41,118 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-browser-impl/3.9.1
2022-03-22 17:13:41,363 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-cytoscape-impl/3.9.1
2022-03-22 17:13:41,402 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.graphml-impl/3.9.1
2022-03-22 17:13:41,415 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.manual-layout-impl/3.9.1
2022-03-22 17:13:41,591 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-prefuse-impl/3.9.1
2022-03-22 17:13:41,604 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-import-impl/3.9.1
2022-03-22 17:13:42,114 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.editor-impl/3.9.1
2022-03-22 17:13:42,145 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.app-impl/3.9.1
2022-03-22 17:13:42,251 [pool-9-thread-1] INFO  org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607
2022-03-22 17:13:42,267 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:13:42,299 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1]
2022-03-22 17:13:42,300 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.gui-cmdline-parser-impl/3.9.1
2022-03-22 17:13:42,327 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-functions-impl/3.9.1
2022-03-22 17:13:42,346 [features-3-thread-1] INFO  org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener
2022-03-22 17:13:43,687 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done.
2022-03-22 17:13:43,769 [pool-8-thread-1] INFO  org.cytoscape.rest.internal.CyActivator - CyREST [3.12.3] discovered previous CyREST Version: 3.12.0.SNAPSHOT
2022-03-22 17:13:43,794 [pool-8-thread-1] WARN  org.cytoscape.rest.internal.CyActivator - Detected new installation. Restarting Cytoscape is recommended.
2022-03-22 17:13:44,182 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client
2022-03-22 17:13:44,790 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:13:44,792 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:13:44,794 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:13:44,912 [pool-8-thread-1] INFO  org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice
2022-03-22 17:13:44,964 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: BioMart Client
2022-03-22 17:13:45,081 [Thread-17] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'.
2022-03-22 17:13:45,718 [Task-Thread-1-Factory-0x244dee42] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted.  Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@429a035f
2022-03-22 17:13:45,719 [Task-Thread-1-Factory-0x244dee42] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@429a035f
2022-03-22 17:13:45,727 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Custom Graphics Metadata was not found. (This is normal for the first time.)
2022-03-22 17:13:46,568 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.839 sec.
2022-03-22 17:13:57,977 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted.  Need to check priority: org.cytoscape.io.internal.read.session.Cy3SessionReaderFactoryImpl@11e1f587
2022-03-22 17:13:57,979 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.session.Cy3SessionReaderFactoryImpl@11e1f587
2022-03-22 17:13:58,029 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/
2022-03-22 17:13:58,029 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/
2022-03-22 17:13:58,030 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
__MACOSX/CytoscapeSession-2021_08_16-13_47/._session_thumbnail.png
2022-03-22 17:13:58,189 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/networks/
2022-03-22 17:13:58,191 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/views/
2022-03-22 17:13:58,191 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/631-cc_ALL_140828_0p2.txt/
2022-03-22 17:13:58,191 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/87-87/
2022-03-22 17:13:58,192 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/563-563/
2022-03-22 17:13:58,192 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/264-264/
2022-03-22 17:13:58,192 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/359-359/
2022-03-22 17:13:58,221 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/672-cc_ALL_140828_0p2.txt_deg10_op0p5/
2022-03-22 17:13:58,222 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/536-536/
2022-03-22 17:13:58,222 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/332-332/
2022-03-22 17:13:58,222 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/128-128/
2022-03-22 17:13:58,223 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/196-196/
2022-03-22 17:13:58,223 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/604-604/
2022-03-22 17:13:58,223 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/155-155/
2022-03-22 17:13:58,224 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/495-495/
2022-03-22 17:13:58,224 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/223-223/
2022-03-22 17:13:58,225 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/291-291/
2022-03-22 17:13:58,225 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/400-400/
2022-03-22 17:13:58,226 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/427-427/
2022-03-22 17:13:58,226 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/global/
2022-03-22 17:13:58,226 [Task-Thread-3-Factory-0x244dee42] WARN  org.cytoscape.application.userlog - Unknown entry found in session zip file!
CytoscapeSession-2021_08_16-13_47/tables/468-468/
2022-03-22 17:13:58,270 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 83
2022-03-22 17:13:58,271 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 124
2022-03-22 17:13:58,287 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 151
2022-03-22 17:13:58,287 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 192
2022-03-22 17:13:58,302 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 219
2022-03-22 17:13:58,303 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 260
2022-03-22 17:13:58,316 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 287
2022-03-22 17:13:58,317 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 328
2022-03-22 17:13:58,329 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 355
2022-03-22 17:13:58,329 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 396
2022-03-22 17:13:58,343 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 423
2022-03-22 17:13:58,344 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 464
2022-03-22 17:13:58,358 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 491
2022-03-22 17:13:58,359 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 532
2022-03-22 17:13:58,373 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 559
2022-03-22 17:13:58,374 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 600
2022-03-22 17:13:58,387 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 627
2022-03-22 17:13:58,387 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 668
2022-03-22 17:14:03,533 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@1ced1e21) progress: 0%
2022-03-22 17:14:03,538 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@1ced1e21) title: Load Styles from File
2022-03-22 17:14:03,540 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@1ced1e21) status: Looking for a reader...
2022-03-22 17:14:03,543 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted.  Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@429a035f
2022-03-22 17:14:03,544 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@429a035f
2022-03-22 17:14:03,544 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@1ced1e21) progress: 90%
2022-03-22 17:14:03,548 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@1ced1e21) progress: 100%
2022-03-22 17:14:03,549 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@4c5b83af) progress: 0%
2022-03-22 17:14:03,577 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@4c5b83af) progress: 10%
2022-03-22 17:14:03,578 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@4c5b83af) progress: 20%
2022-03-22 17:14:03,586 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@4c5b83af) progress: 70%
2022-03-22 17:14:03,597 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@4c5b83af) progress: 80%
2022-03-22 17:14:03,597 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@4c5b83af) progress: 100%
2022-03-22 17:14:03,598 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@5e7dcd25) progress: 0%
2022-03-22 17:14:03,599 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@5e7dcd25) title: Add Styles
2022-03-22 17:14:03,599 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@5e7dcd25) status: Adding styles...
2022-03-22 17:14:03,602 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@5e7dcd25) status: 1 of 1: size_rank
2022-03-22 17:14:03,603 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@5e7dcd25) progress: 100%
2022-03-22 17:14:03,604 [Task-Thread-3-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@5e7dcd25) progress: 100%
2022-03-22 17:14:07,038 [Task-Thread-1-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/3/karaf_data/tmp
2022-03-22 17:14:07,041 [Task-Thread-1-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Image loading process finished in 0.005 sec.
2022-03-22 17:14:07,041 [Task-Thread-1-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Currently,  23 images are available.
2022-03-22 17:14:07,042 [Task-Thread-1-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.006 sec.
2022-03-22 17:14:16,173 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3
2022-03-22 17:14:16,177 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - ========== Image saving process finished =============
2022-03-22 17:14:16,185 [Task-Thread-4-Factory-0x244dee42] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.004 sec.
2022-03-22 17:14:16,234 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - #CiaoBello
2022-03-22 17:14:16,254 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:14:16,260 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:14:16,268 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8
2022-03-22 17:14:16,278 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:14:16,286 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:14:16,346 [FelixStartLevel] INFO  org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2...
2022-03-22 17:14:16,488 [FelixStartLevel] INFO  org.cytoscape.rest.internal.CyActivator - Shutting down REST server...
2022-03-22 17:14:17,392 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:14:17,400 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:14:17,401 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:14:17,402 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:14:17,403 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:14:17,405 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8
2022-03-22 17:14:17,406 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:14:17,407 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:14:17,408 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:15:20,581 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg
2022-03-22 17:15:20,648 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg
2022-03-22 17:15:20,679 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg
2022-03-22 17:15:20,714 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg
2022-03-22 17:15:20,741 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg
2022-03-22 17:15:20,769 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg
2022-03-22 17:15:22,341 [activator-1-thread-2] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1]
2022-03-22 17:15:23,306 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform:
2022-03-22 17:15:23,307 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   Region: root
2022-03-22 17:15:23,307 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -     Bundles to install:
2022-03-22 17:15:23,308 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.activation/com.springsource.javax.activation/1.1.1
2022-03-22 17:15:23,308 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:15:23,308 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/edge-bundler-impl/3.9.1
2022-03-22 17:15:23,308 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.ws.rs/javax.ws.rs-api/2.1
2022-03-22 17:15:23,309 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:15:23,309 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:15:23,309 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:15:23,309 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0
2022-03-22 17:15:23,310 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6
2022-03-22 17:15:23,310 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:commons-io/commons-io/2.1
2022-03-22 17:15:23,310 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:15:23,310 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:15:23,311 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:15:23,311 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:15:23,311 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8
2022-03-22 17:15:23,311 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:15:23,312 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8
2022-03-22 17:15:23,312 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8
2022-03-22 17:15:23,312 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:15:23,312 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:15:23,313 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:15:23,313 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:15:23,313 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8
2022-03-22 17:15:23,313 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8
2022-03-22 17:15:23,313 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:15:23,314 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8
2022-03-22 17:15:23,314 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8
2022-03-22 17:15:23,314 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8
2022-03-22 17:15:23,314 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8
2022-03-22 17:15:23,314 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1
2022-03-22 17:15:23,315 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5
2022-03-22 17:15:23,315 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:15:23,315 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:15:23,315 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:15:23,315 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:15:23,316 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/api-bundle/3.9.1
2022-03-22 17:15:23,316 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/app-impl/3.9.1
2022-03-22 17:15:23,316 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/application-impl/3.9.1
2022-03-22 17:15:23,316 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1
2022-03-22 17:15:23,316 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/cmdline/3.9.1
2022-03-22 17:15:23,317 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/cmdline-impl/3.9.1
2022-03-22 17:15:23,317 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/command-executor-impl/3.9.1
2022-03-22 17:15:23,317 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/core-task-impl/3.9.1
2022-03-22 17:15:23,318 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/custom-graphics-internal/3.9.1
2022-03-22 17:15:23,318 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1
2022-03-22 17:15:23,318 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/ding-presentation-impl/3.9.1
2022-03-22 17:15:23,318 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/editor-impl/3.9.1
2022-03-22 17:15:23,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-functions-impl/3.9.1
2022-03-22 17:15:23,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-impl/3.9.1
2022-03-22 17:15:23,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/event-impl/3.9.1
2022-03-22 17:15:23,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/filter2-impl/3.9.1
2022-03-22 17:15:23,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/graphml-impl/3.9.1
2022-03-22 17:15:23,320 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/group-impl/3.9.1
2022-03-22 17:15:23,320 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1
2022-03-22 17:15:23,320 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/io-impl/3.9.1
2022-03-22 17:15:23,320 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/datasource-impl/3.9.1
2022-03-22 17:15:23,321 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/jobs-impl/3.9.1
2022-03-22 17:15:23,321 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-cytoscape-impl/3.9.1
2022-03-22 17:15:23,321 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-impl/3.9.1
2022-03-22 17:15:23,321 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-prefuse-impl/3.9.1
2022-03-22 17:15:23,322 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/linkout-impl/3.9.1
2022-03-22 17:15:23,322 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/manual-layout-impl/3.9.1
2022-03-22 17:15:23,322 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/model-impl/3.9.1
2022-03-22 17:15:23,323 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/presentation-impl/3.9.1
2022-03-22 17:15:23,323 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/property-impl/3.9.1
2022-03-22 17:15:23,323 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/scripting-impl/3.9.1
2022-03-22 17:15:23,323 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/search-impl/3.9.1
2022-03-22 17:15:23,323 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/session-impl/3.9.1
2022-03-22 17:15:23,324 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1
2022-03-22 17:15:23,324 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/swing-application-impl/3.9.1
2022-03-22 17:15:23,324 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/swing-util-impl/3.9.1
2022-03-22 17:15:23,324 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-browser-impl/3.9.1
2022-03-22 17:15:23,325 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-import-impl/3.9.1
2022-03-22 17:15:23,325 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-presentation-impl/3.9.1
2022-03-22 17:15:23,325 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/third-party/3.9.1
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2022-03-22 17:15:23,327 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/webservice-impl/3.9.1
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2022-03-22 17:15:23,327 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/work-swing-impl/3.9.1
2022-03-22 17:15:23,328 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-builtins/3.13.2
2022-03-22 17:15:23,328 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-reader/3.13.2
2022-03-22 17:15:23,329 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-terminal/3.13.2
2022-03-22 17:15:23,329 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-terminal-jansi/3.13.2
2022-03-22 17:15:23,330 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm/7.2
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2022-03-22 17:15:23,330 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-tree/7.2
2022-03-22 17:15:23,330 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-analysis/7.2
2022-03-22 17:15:23,331 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-util/7.2
2022-03-22 17:15:23,331 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6
2022-03-22 17:15:23,334 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles:
2022-03-22 17:15:23,335 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.activation/com.springsource.javax.activation/1.1.1
2022-03-22 17:15:23,362 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:15:23,385 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/edge-bundler-impl/3.9.1
2022-03-22 17:15:23,452 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.ws.rs/javax.ws.rs-api/2.1
2022-03-22 17:15:23,502 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:15:23,527 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:15:23,552 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:15:23,588 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0
2022-03-22 17:15:23,616 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6
2022-03-22 17:15:23,648 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:commons-io/commons-io/2.1
2022-03-22 17:15:23,678 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:15:23,715 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:15:23,750 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:15:23,773 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:15:23,801 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8
2022-03-22 17:15:23,826 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:15:23,847 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8
2022-03-22 17:15:23,875 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8
2022-03-22 17:15:23,906 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:15:23,937 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:15:23,964 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:15:24,000 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:15:24,060 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8
2022-03-22 17:15:24,095 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8
2022-03-22 17:15:24,131 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:15:24,174 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8
2022-03-22 17:15:24,225 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8
2022-03-22 17:15:24,269 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8
2022-03-22 17:15:24,290 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8
2022-03-22 17:15:24,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1
2022-03-22 17:15:24,366 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5
2022-03-22 17:15:24,444 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:15:24,505 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:15:24,540 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:15:24,579 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:15:24,618 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/api-bundle/3.9.1
2022-03-22 17:15:24,680 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/app-impl/3.9.1
2022-03-22 17:15:24,756 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/application-impl/3.9.1
2022-03-22 17:15:24,816 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1
2022-03-22 17:15:24,859 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/cmdline/3.9.1
2022-03-22 17:15:24,912 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/cmdline-impl/3.9.1
2022-03-22 17:15:24,945 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/command-executor-impl/3.9.1
2022-03-22 17:15:25,012 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/core-task-impl/3.9.1
2022-03-22 17:15:25,103 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/custom-graphics-internal/3.9.1
2022-03-22 17:15:25,164 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1
2022-03-22 17:15:25,205 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/ding-presentation-impl/3.9.1
2022-03-22 17:15:25,277 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/editor-impl/3.9.1
2022-03-22 17:15:25,336 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/equations-functions-impl/3.9.1
2022-03-22 17:15:25,367 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/equations-impl/3.9.1
2022-03-22 17:15:25,395 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/event-impl/3.9.1
2022-03-22 17:15:25,418 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/filter2-impl/3.9.1
2022-03-22 17:15:25,450 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/graphml-impl/3.9.1
2022-03-22 17:15:25,505 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/group-impl/3.9.1
2022-03-22 17:15:25,542 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1
2022-03-22 17:15:25,583 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/io-impl/3.9.1
2022-03-22 17:15:25,656 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/datasource-impl/3.9.1
2022-03-22 17:15:25,689 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/jobs-impl/3.9.1
2022-03-22 17:15:25,742 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-cytoscape-impl/3.9.1
2022-03-22 17:15:25,790 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-impl/3.9.1
2022-03-22 17:15:25,813 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-prefuse-impl/3.9.1
2022-03-22 17:15:25,837 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/linkout-impl/3.9.1
2022-03-22 17:15:25,862 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/manual-layout-impl/3.9.1
2022-03-22 17:15:25,899 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/model-impl/3.9.1
2022-03-22 17:15:26,155 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/presentation-impl/3.9.1
2022-03-22 17:15:26,179 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/property-impl/3.9.1
2022-03-22 17:15:26,209 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/scripting-impl/3.9.1
2022-03-22 17:15:26,236 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/search-impl/3.9.1
2022-03-22 17:15:26,272 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/session-impl/3.9.1
2022-03-22 17:15:26,304 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1
2022-03-22 17:15:26,328 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/swing-application-impl/3.9.1
2022-03-22 17:15:26,443 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/swing-util-impl/3.9.1
2022-03-22 17:15:26,497 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-browser-impl/3.9.1
2022-03-22 17:15:26,552 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-import-impl/3.9.1
2022-03-22 17:15:26,828 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-presentation-impl/3.9.1
2022-03-22 17:15:26,897 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/third-party/3.9.1
2022-03-22 17:15:27,256 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/util-impl/3.9.1
2022-03-22 17:15:27,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-impl/3.9.1
2022-03-22 17:15:27,404 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/viewmodel-impl/3.9.1
2022-03-22 17:15:27,468 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1
2022-03-22 17:15:27,558 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-gui-impl/3.9.1
2022-03-22 17:15:27,635 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/webservice-impl/3.9.1
2022-03-22 17:15:27,723 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/work-impl/3.9.1
2022-03-22 17:15:27,807 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/work-swing-impl/3.9.1
2022-03-22 17:15:27,888 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-builtins/3.13.2
2022-03-22 17:15:27,944 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-reader/3.13.2
2022-03-22 17:15:28,012 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal/3.13.2
2022-03-22 17:15:28,085 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal-jansi/3.13.2
2022-03-22 17:15:28,154 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm/7.2
2022-03-22 17:15:28,242 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-commons/7.2
2022-03-22 17:15:28,333 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-tree/7.2
2022-03-22 17:15:28,358 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-analysis/7.2
2022-03-22 17:15:28,384 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-util/7.2
2022-03-22 17:15:28,407 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6
2022-03-22 17:15:30,355 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles:
2022-03-22 17:15:30,359 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.splash-updater-impl/3.9.1
2022-03-22 17:15:30,372 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.diagnostics-impl/3.9.1
2022-03-22 17:15:30,389 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:15:30,393 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm/7.2.0
2022-03-22 17:15:30,401 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree/7.2.0
2022-03-22 17:15:30,409 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.commons/7.2.0
2022-03-22 17:15:30,413 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.proxy/1.1.6
2022-03-22 17:15:30,437 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:15:30,509 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations
2022-03-22 17:15:30,751 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started
2022-03-22 17:15:30,752 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:15:30,785 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started
2022-03-22 17:15:30,786 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree.analysis/7.2.0
2022-03-22 17:15:30,792 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.util/7.2.0
2022-03-22 17:15:30,805 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:15:30,820 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:15:30,843 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.terminal/3.13.2
2022-03-22 17:15:30,850 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.reader/3.13.2
2022-03-22 17:15:30,855 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.builtins/3.13.2
2022-03-22 17:15:30,860 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.core/4.2.8
2022-03-22 17:15:30,920 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.console.osgi.Activator - Not starting local console. To activate set karaf.startLocalConsole=true
2022-03-22 17:15:31,047 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started
2022-03-22 17:15:31,048 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.system.core/4.2.8
2022-03-22 17:15:31,093 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:15:31,096 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.features.command/4.2.8
2022-03-22 17:15:31,133 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:15:31,136 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.service.core/4.2.8
2022-03-22 17:15:31,158 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:15:31,158 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:15:31,203 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:15:31,204 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:15:31,230 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:15:31,260 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:15:31,292 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:15:31,295 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:15:31,299 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:15:31,301 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:15:31,321 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.instance.core/4.2.8
2022-03-22 17:15:31,378 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:15:31,380 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:15:31,405 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:15:31,406 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:15:31,433 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started
2022-03-22 17:15:31,435 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.table/4.2.8
2022-03-22 17:15:31,444 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:15:31,470 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:15:31,471 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.log.core/4.2.8
2022-03-22 17:15:31,504 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.log.core/4.2.8. Missing service: [org.apache.karaf.log.core.LogEventFormatter]
2022-03-22 17:15:31,508 [activator-1-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8
2022-03-22 17:15:31,533 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.commons.io/2.1.0
2022-03-22 17:15:31,542 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:15:31,569 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:15:31,577 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.xmlbeans/2.4.0.5
2022-03-22 17:15:31,584 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.activation/1.1.1
2022-03-22 17:15:31,591 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:15:31,619 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.jaxb-impl/2.1.6.1
2022-03-22 17:15:31,627 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.third-party/3.9.1
2022-03-22 17:15:31,639 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   uk.ac.ebi.enfin.mi.cluster/1.6.0
2022-03-22 17:15:31,653 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:15:31,676 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:15:31,697 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   javax.ws.rs-api/2.1.0
2022-03-22 17:15:31,743 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline/3.9.1
2022-03-22 17:15:31,799 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.api-bundle/3.9.1
2022-03-22 17:15:31,862 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline-impl/3.9.1
2022-03-22 17:15:31,913 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.event-impl/3.9.1
2022-03-22 17:15:31,931 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.property.internal/3.9.1
2022-03-22 17:15:32,013 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.util-impl/3.9.1
2022-03-22 17:15:32,042 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-impl/3.9.1
2022-03-22 17:15:32,092 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io.datasource-impl/3.9.1
2022-03-22 17:15:32,127 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.application-impl/3.9.1
2022-03-22 17:15:32,148 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration
2022-03-22 17:15:32,156 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration
2022-03-22 17:15:32,187 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-util-impl/3.9.1
2022-03-22 17:15:32,293 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-swing-impl/3.9.1
2022-03-22 17:15:32,357 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-impl/3.9.1
2022-03-22 17:15:32,390 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.model-impl/3.9.1
2022-03-22 17:15:32,818 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.presentation-impl/3.9.1
2022-03-22 17:15:32,831 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.viewmodel-impl/3.9.1
2022-03-22 17:15:32,877 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.view.vizmap-impl/3.9.1
2022-03-22 17:15:32,966 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-impl/3.9.1
2022-03-22 17:15:32,992 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.group-impl/3.9.1
2022-03-22 17:15:33,221 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-core-impl/3.9.1
2022-03-22 17:15:33,235 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.session-impl/3.9.1
2022-03-22 17:15:33,276 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.custom-graphics-internal/3.9.1
2022-03-22 17:15:33,502 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-presentation-impl/3.9.1
2022-03-22 17:15:33,619 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.ding-presentation-impl/3.9.1
2022-03-22 17:15:33,792 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io-impl/3.9.1
2022-03-22 17:15:33,892 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.core-task-impl/3.9.1
2022-03-22 17:15:34,100 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.command-executor-impl/3.9.1
2022-03-22 17:15:34,174 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-application-impl/3.9.1
2022-03-22 17:15:35,758 [features-3-thread-1] WARN  org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist.
2022-03-22 17:15:36,021 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.jobs-impl/3.9.1
2022-03-22 17:15:36,107 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.linkout-impl/3.9.1
2022-03-22 17:15:36,140 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-import-impl/3.9.1
2022-03-22 17:15:36,666 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-browser-impl/3.9.1
2022-03-22 17:15:36,969 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-prefuse-impl/3.9.1
2022-03-22 17:15:36,983 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.filter2-impl/3.9.1
2022-03-22 17:15:37,289 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.search-impl/3.9.1
2022-03-22 17:15:37,319 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.editor-impl/3.9.1
2022-03-22 17:15:37,345 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-impl/3.9.1
2022-03-22 17:15:37,766 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2
2022-03-22 17:15:37,768 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43
2022-03-22 17:15:38,264 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-cytoscape-impl/3.9.1
2022-03-22 17:15:38,316 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.graphml-impl/3.9.1
2022-03-22 17:15:38,333 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.manual-layout-impl/3.9.1
2022-03-22 17:15:38,518 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.webservice-impl/3.9.1
2022-03-22 17:15:38,588 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   edge-bundler/3.9.1
2022-03-22 17:15:38,602 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.app-impl/3.9.1
2022-03-22 17:15:38,699 [pool-9-thread-1] INFO  org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607
2022-03-22 17:15:38,714 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:15:38,745 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1]
2022-03-22 17:15:38,747 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.gui-cmdline-parser-impl/3.9.1
2022-03-22 17:15:38,768 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-functions-impl/3.9.1
2022-03-22 17:15:38,787 [features-3-thread-1] INFO  org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener
2022-03-22 17:15:40,615 [Thread-17] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'.
2022-03-22 17:15:40,645 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done.
2022-03-22 17:15:41,497 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client
2022-03-22 17:15:41,549 [pool-8-thread-1] INFO  org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice
2022-03-22 17:15:41,608 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: BioMart Client
2022-03-22 17:15:41,934 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:15:41,936 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:15:41,938 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:15:42,186 [Task-Thread-1-Factory-0x70c3197f] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted.  Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@39467756
2022-03-22 17:15:42,187 [Task-Thread-1-Factory-0x70c3197f] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@39467756
2022-03-22 17:15:42,197 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3
2022-03-22 17:15:42,202 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Image loading process finished in 0.006 sec.
2022-03-22 17:15:42,204 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Currently,  -1 images are available.
2022-03-22 17:15:43,232 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Image saving process finished in 1.038 sec.
2022-03-22 17:15:45,527 [pool-8-thread-1] INFO  org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209
2022-03-22 17:15:45,963 [pool-83-thread-1] INFO  org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server...
2022-03-22 17:15:47,664 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: ID = 83
2022-03-22 17:15:47,665 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - CyNetwork w/ public tables created: Base Graph ID = 124
2022-03-22 17:15:47,696 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Examining bundle for SPI provider: org.eclipse.jetty.http
2022-03-22 17:15:47,700 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Found SPI resource: bundle://138.0:0/META-INF/services/org.eclipse.jetty.http.HttpFieldPreEncoder
2022-03-22 17:15:47,755 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Loaded SPI provider: class org.eclipse.jetty.http.Http1FieldPreEncoder
2022-03-22 17:15:47,758 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Registered service: org.apache.felix.framework.ServiceRegistrationImpl@44f69907
2022-03-22 17:15:47,758 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Registered provider: org.eclipse.jetty.http.HttpFieldPreEncoder in bundle org.eclipse.jetty.http
2022-03-22 17:15:48,444 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@13481532) progress: 0%
2022-03-22 17:15:48,446 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@13481532) title: Load Styles from File
2022-03-22 17:15:48,447 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@13481532) status: Looking for a reader...
2022-03-22 17:15:48,450 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted.  Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@39467756
2022-03-22 17:15:48,451 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@39467756
2022-03-22 17:15:48,452 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@13481532) progress: 90%
2022-03-22 17:15:48,456 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask@13481532) progress: 100%
2022-03-22 17:15:48,457 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@9e129d5) progress: 0%
2022-03-22 17:15:48,489 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@9e129d5) progress: 10%
2022-03-22 17:15:48,490 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@9e129d5) progress: 20%
2022-03-22 17:15:48,501 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@9e129d5) progress: 70%
2022-03-22 17:15:48,513 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@9e129d5) progress: 80%
2022-03-22 17:15:48,514 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.io.internal.read.vizmap.VizmapXMLReader@9e129d5) progress: 100%
2022-03-22 17:15:48,514 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@45dd74f0) progress: 0%
2022-03-22 17:15:48,515 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@45dd74f0) title: Add Styles
2022-03-22 17:15:48,515 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@45dd74f0) status: Adding styles...
2022-03-22 17:15:48,517 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@45dd74f0) status: 1 of 1: size_rank
2022-03-22 17:15:48,519 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@45dd74f0) progress: 100%
2022-03-22 17:15:48,520 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Task (org.cytoscape.task.internal.vizmap.LoadVizmapFileTask$AddVisualStylesTask@45dd74f0) progress: 100%
2022-03-22 17:15:48,905 [pool-83-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.http.core/4.2.8. Missing service: [org.apache.karaf.http.core.ServletService, org.apache.karaf.http.core.ProxyService]
2022-03-22 17:15:49,504 [activator-1-thread-2] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8
2022-03-22 17:15:49,515 [activator-1-thread-2] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8
2022-03-22 17:15:49,573 [activator-1-thread-3] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8
2022-03-22 17:15:53,031 [pool-83-thread-1] INFO  org.cytoscape.rest.internal.task.ResourceManager - ========== Cytoscape RESTful API registered core resources in (2068) milliseconds.
2022-03-22 17:15:53,031 [pool-83-thread-1] INFO  org.cytoscape.rest.internal.CyActivator - cyREST API Server initialized in 7068msec
2022-03-22 17:16:27,231 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3
2022-03-22 17:16:27,234 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - ========== Image saving process finished =============
2022-03-22 17:16:27,243 [Task-Thread-3-Factory-0x70c3197f] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.005 sec.
2022-03-22 17:16:27,319 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - #CiaoBello
2022-03-22 17:16:27,332 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8
2022-03-22 17:16:27,344 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:16:27,348 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:16:27,354 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:16:27,363 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:16:27,536 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8
2022-03-22 17:16:27,692 [FelixStartLevel] INFO  org.apache.aries.spifly.BaseActivator - Unregistered: org.apache.felix.framework.ServiceRegistrationImpl@44f69907
2022-03-22 17:16:27,774 [FelixStartLevel] INFO  org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2...
2022-03-22 17:16:27,842 [FelixStartLevel] INFO  org.cytoscape.rest.internal.CyActivator - Shutting down REST server...
2022-03-22 17:16:29,057 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:16:29,061 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:16:29,062 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:16:29,064 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:16:29,065 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:16:29,067 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:16:29,068 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:16:29,070 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:16:29,072 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8
2022-03-22 17:19:31,665 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg
2022-03-22 17:19:31,721 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg
2022-03-22 17:19:31,761 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg
2022-03-22 17:19:31,798 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg
2022-03-22 17:19:31,834 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg
2022-03-22 17:19:31,866 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg
2022-03-22 17:19:33,467 [activator-1-thread-2] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1]
2022-03-22 17:19:34,437 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform:
2022-03-22 17:19:34,437 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   Region: root
2022-03-22 17:19:34,437 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -     Bundles to install:
2022-03-22 17:19:34,438 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.activation/com.springsource.javax.activation/1.1.1
2022-03-22 17:19:34,438 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:19:34,438 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/edge-bundler-impl/3.9.1
2022-03-22 17:19:34,438 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.ws.rs/javax.ws.rs-api/2.1
2022-03-22 17:19:34,439 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:19:34,439 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:19:34,439 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:19:34,439 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0
2022-03-22 17:19:34,440 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6
2022-03-22 17:19:34,440 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:commons-io/commons-io/2.1
2022-03-22 17:19:34,440 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:19:34,440 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:19:34,440 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:19:34,441 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:19:34,441 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8
2022-03-22 17:19:34,441 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:19:34,441 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8
2022-03-22 17:19:34,442 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8
2022-03-22 17:19:34,442 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:19:34,442 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:19:34,443 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:19:34,443 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:19:34,443 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8
2022-03-22 17:19:34,443 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8
2022-03-22 17:19:34,444 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:19:34,444 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8
2022-03-22 17:19:34,444 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8
2022-03-22 17:19:34,444 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8
2022-03-22 17:19:34,445 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8
2022-03-22 17:19:34,445 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1
2022-03-22 17:19:34,445 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5
2022-03-22 17:19:34,445 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:19:34,446 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:19:34,446 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:19:34,446 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:19:34,446 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/api-bundle/3.9.1
2022-03-22 17:19:34,446 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/app-impl/3.9.1
2022-03-22 17:19:34,447 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/application-impl/3.9.1
2022-03-22 17:19:34,447 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1
2022-03-22 17:19:34,447 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/cmdline/3.9.1
2022-03-22 17:19:34,447 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/cmdline-impl/3.9.1
2022-03-22 17:19:34,447 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/command-executor-impl/3.9.1
2022-03-22 17:19:34,448 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/core-task-impl/3.9.1
2022-03-22 17:19:34,448 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/custom-graphics-internal/3.9.1
2022-03-22 17:19:34,448 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1
2022-03-22 17:19:34,449 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/ding-presentation-impl/3.9.1
2022-03-22 17:19:34,449 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/editor-impl/3.9.1
2022-03-22 17:19:34,449 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-functions-impl/3.9.1
2022-03-22 17:19:34,449 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-impl/3.9.1
2022-03-22 17:19:34,449 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/event-impl/3.9.1
2022-03-22 17:19:34,450 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/filter2-impl/3.9.1
2022-03-22 17:19:34,450 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/graphml-impl/3.9.1
2022-03-22 17:19:34,450 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/group-impl/3.9.1
2022-03-22 17:19:34,450 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1
2022-03-22 17:19:34,451 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/io-impl/3.9.1
2022-03-22 17:19:34,451 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/datasource-impl/3.9.1
2022-03-22 17:19:34,451 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/jobs-impl/3.9.1
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2022-03-22 17:19:37,505 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/work-swing-impl/3.9.1
2022-03-22 17:19:37,538 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-builtins/3.13.2
2022-03-22 17:19:37,568 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-reader/3.13.2
2022-03-22 17:19:37,594 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal/3.13.2
2022-03-22 17:19:37,620 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal-jansi/3.13.2
2022-03-22 17:19:37,638 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm/7.2
2022-03-22 17:19:37,662 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-commons/7.2
2022-03-22 17:19:37,685 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-tree/7.2
2022-03-22 17:19:37,707 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-analysis/7.2
2022-03-22 17:19:37,729 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-util/7.2
2022-03-22 17:19:37,751 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6
2022-03-22 17:19:39,259 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles:
2022-03-22 17:19:39,263 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.splash-updater-impl/3.9.1
2022-03-22 17:19:39,272 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.diagnostics-impl/3.9.1
2022-03-22 17:19:39,287 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm/7.2.0
2022-03-22 17:19:39,291 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree/7.2.0
2022-03-22 17:19:39,294 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree.analysis/7.2.0
2022-03-22 17:19:39,298 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.util/7.2.0
2022-03-22 17:19:39,302 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:19:39,305 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.commons/7.2.0
2022-03-22 17:19:39,309 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.proxy/1.1.6
2022-03-22 17:19:39,324 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:19:39,385 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations
2022-03-22 17:19:39,610 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started
2022-03-22 17:19:39,612 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:19:39,643 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started
2022-03-22 17:19:39,645 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:19:39,774 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:19:39,848 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.terminal/3.13.2
2022-03-22 17:19:39,871 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.reader/3.13.2
2022-03-22 17:19:39,876 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.builtins/3.13.2
2022-03-22 17:19:39,880 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.core/4.2.8
2022-03-22 17:19:39,953 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.console.osgi.Activator - Not starting local console. To activate set karaf.startLocalConsole=true
2022-03-22 17:19:40,101 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started
2022-03-22 17:19:40,102 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:19:40,150 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:19:40,155 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.service.core/4.2.8
2022-03-22 17:19:40,175 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:19:40,177 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:19:40,196 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:19:40,215 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started
2022-03-22 17:19:40,215 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:19:40,273 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:19:40,274 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:19:40,303 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.features.command/4.2.8
2022-03-22 17:19:40,333 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:19:40,335 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.instance.core/4.2.8
2022-03-22 17:19:40,378 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:19:40,381 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:19:40,397 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:19:40,398 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.log.core/4.2.8
2022-03-22 17:19:40,427 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.log.core/4.2.8. Missing service: [org.apache.karaf.log.core.LogEventFormatter, org.apache.karaf.log.core.LogService]
2022-03-22 17:19:40,427 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:19:40,428 [activator-1-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8
2022-03-22 17:19:40,450 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:19:40,478 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:19:40,481 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:19:40,485 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:19:40,488 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.table/4.2.8
2022-03-22 17:19:40,493 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.system.core/4.2.8
2022-03-22 17:19:40,517 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:19:40,530 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:19:40,555 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.activation/1.1.1
2022-03-22 17:19:40,560 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:19:40,580 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:19:40,598 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.commons.io/2.1.0
2022-03-22 17:19:40,603 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:19:40,607 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:19:40,629 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.jaxb-impl/2.1.6.1
2022-03-22 17:19:40,633 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   uk.ac.ebi.enfin.mi.cluster/1.6.0
2022-03-22 17:19:40,640 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.third-party/3.9.1
2022-03-22 17:19:40,648 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.xmlbeans/2.4.0.5
2022-03-22 17:19:40,654 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   javax.ws.rs-api/2.1.0
2022-03-22 17:19:40,659 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.api-bundle/3.9.1
2022-03-22 17:19:40,667 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline/3.9.1
2022-03-22 17:19:40,672 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.property.internal/3.9.1
2022-03-22 17:19:40,739 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline-impl/3.9.1
2022-03-22 17:19:40,747 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.event-impl/3.9.1
2022-03-22 17:19:40,758 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.util-impl/3.9.1
2022-03-22 17:19:40,777 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io.datasource-impl/3.9.1
2022-03-22 17:19:40,796 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-impl/3.9.1
2022-03-22 17:19:40,846 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.application-impl/3.9.1
2022-03-22 17:19:40,865 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration
2022-03-22 17:19:40,866 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration
2022-03-22 17:19:40,881 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-util-impl/3.9.1
2022-03-22 17:19:40,931 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.presentation-impl/3.9.1
2022-03-22 17:19:40,947 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-swing-impl/3.9.1
2022-03-22 17:19:41,019 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-impl/3.9.1
2022-03-22 17:19:41,041 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.model-impl/3.9.1
2022-03-22 17:19:41,483 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.viewmodel-impl/3.9.1
2022-03-22 17:19:41,530 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.view.vizmap-impl/3.9.1
2022-03-22 17:19:41,606 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-impl/3.9.1
2022-03-22 17:19:41,620 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.group-impl/3.9.1
2022-03-22 17:19:41,815 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-core-impl/3.9.1
2022-03-22 17:19:41,822 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.session-impl/3.9.1
2022-03-22 17:19:41,839 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.custom-graphics-internal/3.9.1
2022-03-22 17:19:42,042 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.ding-presentation-impl/3.9.1
2022-03-22 17:19:42,216 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-presentation-impl/3.9.1
2022-03-22 17:19:42,288 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io-impl/3.9.1
2022-03-22 17:19:42,390 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.core-task-impl/3.9.1
2022-03-22 17:19:42,572 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.command-executor-impl/3.9.1
2022-03-22 17:19:42,637 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-application-impl/3.9.1
2022-03-22 17:19:44,029 [features-3-thread-1] WARN  org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist.
2022-03-22 17:19:44,315 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.jobs-impl/3.9.1
2022-03-22 17:19:44,397 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-impl/3.9.1
2022-03-22 17:19:44,899 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2
2022-03-22 17:19:44,900 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43
2022-03-22 17:19:45,256 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-prefuse-impl/3.9.1
2022-03-22 17:19:45,267 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-import-impl/3.9.1
2022-03-22 17:19:45,774 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.webservice-impl/3.9.1
2022-03-22 17:19:45,876 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.graphml-impl/3.9.1
2022-03-22 17:19:45,886 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.manual-layout-impl/3.9.1
2022-03-22 17:19:46,077 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-browser-impl/3.9.1
2022-03-22 17:19:46,426 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-cytoscape-impl/3.9.1
2022-03-22 17:19:46,475 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.search-impl/3.9.1
2022-03-22 17:19:46,575 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.linkout-impl/3.9.1
2022-03-22 17:19:46,610 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   edge-bundler/3.9.1
2022-03-22 17:19:46,623 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.editor-impl/3.9.1
2022-03-22 17:19:46,649 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.filter2-impl/3.9.1
2022-03-22 17:19:46,867 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.app-impl/3.9.1
2022-03-22 17:19:46,968 [pool-9-thread-1] INFO  org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607
2022-03-22 17:19:46,985 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:19:47,012 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1]
2022-03-22 17:19:47,014 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.gui-cmdline-parser-impl/3.9.1
2022-03-22 17:19:47,032 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-functions-impl/3.9.1
2022-03-22 17:19:47,049 [features-3-thread-1] INFO  org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener
2022-03-22 17:19:48,216 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done.
2022-03-22 17:19:48,514 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:19:48,517 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:19:48,518 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:19:48,741 [pool-8-thread-1] INFO  org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice
2022-03-22 17:19:48,804 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: BioMart Client
2022-03-22 17:19:49,110 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client
2022-03-22 17:19:49,147 [Thread-17] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'.
2022-03-22 17:19:49,875 [Task-Thread-1-Factory-0x520fa562] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted.  Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@7b906437
2022-03-22 17:19:49,877 [Task-Thread-1-Factory-0x520fa562] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@7b906437
2022-03-22 17:19:49,921 [Task-Thread-3-Factory-0x520fa562] INFO  org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3
2022-03-22 17:19:49,956 [Task-Thread-3-Factory-0x520fa562] INFO  org.cytoscape.application.userlog - Image loading process finished in 0.056 sec.
2022-03-22 17:19:49,957 [Task-Thread-3-Factory-0x520fa562] INFO  org.cytoscape.application.userlog - Currently,  -1 images are available.
2022-03-22 17:19:50,566 [Task-Thread-3-Factory-0x520fa562] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.683 sec.
2022-03-22 17:19:52,622 [pool-8-thread-1] INFO  org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209
2022-03-22 17:19:52,767 [pool-83-thread-1] INFO  org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server...
2022-03-22 17:19:54,354 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3
2022-03-22 17:19:54,358 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - ========== Image saving process finished =============
2022-03-22 17:19:54,376 [Task-Thread-3-Factory-0x520fa562] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.015 sec.
2022-03-22 17:19:54,479 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - #CiaoBello
2022-03-22 17:19:54,521 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8
2022-03-22 17:19:54,538 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:19:54,545 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:19:54,556 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:19:54,569 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:19:54,708 [FelixStartLevel] INFO  org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2...
2022-03-22 17:19:54,729 [pool-83-thread-1] ERROR org.cytoscape.rest.internal.CyActivator - Failed to initialize cyREST server.
org.osgi.framework.BundleException: The framework has been shutdown.
	at org.apache.felix.framework.Felix.installBundle(Felix.java:2995) ~[?:?]
	at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:167) ~[?:?]
	at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:140) ~[?:?]
	at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installFeature(OSGiJAXRSManager.java:156) ~[!/:?]
	at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installOSGiJAXRSBundles(OSGiJAXRSManager.java:114) ~[!/:?]
	at org.cytoscape.rest.internal.CyActivator.lambda$startCyREST$0(CyActivator.java:325) [!/:?]
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) [?:?]
	at java.util.concurrent.FutureTask.run(FutureTask.java:264) [?:?]
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) [?:?]
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) [?:?]
	at java.lang.Thread.run(Thread.java:834) [?:?]
2022-03-22 17:19:54,795 [FelixStartLevel] INFO  org.cytoscape.rest.internal.CyActivator - Shutting down REST server...
2022-03-22 17:19:55,641 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:19:55,648 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:19:55,649 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:19:55,650 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:19:55,652 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:19:55,653 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:19:55,654 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:19:55,655 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8
2022-03-22 17:19:55,656 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:02,209 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg
2022-03-22 17:22:02,258 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg
2022-03-22 17:22:02,287 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg
2022-03-22 17:22:02,323 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg
2022-03-22 17:22:02,351 [FelixStartLevel] INFO  org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg
2022-03-22 17:22:04,051 [activator-1-thread-2] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1]
2022-03-22 17:22:05,028 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform:
2022-03-22 17:22:05,029 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   Region: root
2022-03-22 17:22:05,029 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -     Bundles to install:
2022-03-22 17:22:05,029 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.activation/com.springsource.javax.activation/1.1.1
2022-03-22 17:22:05,029 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:22:05,030 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/edge-bundler-impl/3.9.1
2022-03-22 17:22:05,030 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:javax.ws.rs/javax.ws.rs-api/2.1
2022-03-22 17:22:05,030 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:22:05,030 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:22:05,031 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:22:05,031 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0
2022-03-22 17:22:05,031 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6
2022-03-22 17:22:05,031 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:commons-io/commons-io/2.1
2022-03-22 17:22:05,032 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:22:05,032 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:22:05,032 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:22:05,032 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:22:05,033 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8
2022-03-22 17:22:05,033 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:22:05,033 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8
2022-03-22 17:22:05,036 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8
2022-03-22 17:22:05,036 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:22:05,037 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:05,037 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:22:05,037 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:22:05,037 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8
2022-03-22 17:22:05,038 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8
2022-03-22 17:22:05,038 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:22:05,038 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8
2022-03-22 17:22:05,038 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8
2022-03-22 17:22:05,039 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8
2022-03-22 17:22:05,039 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8
2022-03-22 17:22:05,039 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1
2022-03-22 17:22:05,039 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5
2022-03-22 17:22:05,039 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:22:05,040 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:22:05,040 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:22:05,040 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:22:05,040 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/api-bundle/3.9.1
2022-03-22 17:22:05,040 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/app-impl/3.9.1
2022-03-22 17:22:05,041 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/application-impl/3.9.1
2022-03-22 17:22:05,041 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1
2022-03-22 17:22:05,041 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/cmdline/3.9.1
2022-03-22 17:22:05,041 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/cmdline-impl/3.9.1
2022-03-22 17:22:05,041 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/command-executor-impl/3.9.1
2022-03-22 17:22:05,042 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/core-task-impl/3.9.1
2022-03-22 17:22:05,042 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/custom-graphics-internal/3.9.1
2022-03-22 17:22:05,042 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1
2022-03-22 17:22:05,042 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/ding-presentation-impl/3.9.1
2022-03-22 17:22:05,042 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/editor-impl/3.9.1
2022-03-22 17:22:05,043 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-functions-impl/3.9.1
2022-03-22 17:22:05,043 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/equations-impl/3.9.1
2022-03-22 17:22:05,043 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/event-impl/3.9.1
2022-03-22 17:22:05,043 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/filter2-impl/3.9.1
2022-03-22 17:22:05,043 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/graphml-impl/3.9.1
2022-03-22 17:22:05,043 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/group-impl/3.9.1
2022-03-22 17:22:05,044 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1
2022-03-22 17:22:05,044 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/io-impl/3.9.1
2022-03-22 17:22:05,044 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/datasource-impl/3.9.1
2022-03-22 17:22:05,044 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/jobs-impl/3.9.1
2022-03-22 17:22:05,044 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-cytoscape-impl/3.9.1
2022-03-22 17:22:05,045 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-impl/3.9.1
2022-03-22 17:22:05,045 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/layout-prefuse-impl/3.9.1
2022-03-22 17:22:05,045 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/linkout-impl/3.9.1
2022-03-22 17:22:05,045 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/manual-layout-impl/3.9.1
2022-03-22 17:22:05,045 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/model-impl/3.9.1
2022-03-22 17:22:05,046 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/presentation-impl/3.9.1
2022-03-22 17:22:05,046 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/property-impl/3.9.1
2022-03-22 17:22:05,046 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/scripting-impl/3.9.1
2022-03-22 17:22:05,046 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/search-impl/3.9.1
2022-03-22 17:22:05,047 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/session-impl/3.9.1
2022-03-22 17:22:05,047 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1
2022-03-22 17:22:05,047 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/swing-application-impl/3.9.1
2022-03-22 17:22:05,047 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/swing-util-impl/3.9.1
2022-03-22 17:22:05,047 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-browser-impl/3.9.1
2022-03-22 17:22:05,048 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-import-impl/3.9.1
2022-03-22 17:22:05,048 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/table-presentation-impl/3.9.1
2022-03-22 17:22:05,049 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape.distribution/third-party/3.9.1
2022-03-22 17:22:05,049 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/util-impl/3.9.1
2022-03-22 17:22:05,049 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/vizmap-impl/3.9.1
2022-03-22 17:22:05,049 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/viewmodel-impl/3.9.1
2022-03-22 17:22:05,049 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1
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2022-03-22 17:22:05,050 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/webservice-impl/3.9.1
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2022-03-22 17:22:05,050 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.cytoscape/work-swing-impl/3.9.1
2022-03-22 17:22:05,050 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-builtins/3.13.2
2022-03-22 17:22:05,051 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-reader/3.13.2
2022-03-22 17:22:05,051 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-terminal/3.13.2
2022-03-22 17:22:05,051 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.jline/jline-terminal-jansi/3.13.2
2022-03-22 17:22:05,051 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm/7.2
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2022-03-22 17:22:05,052 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-tree/7.2
2022-03-22 17:22:05,052 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-analysis/7.2
2022-03-22 17:22:05,052 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:org.ow2.asm/asm-util/7.2
2022-03-22 17:22:05,052 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -       mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6
2022-03-22 17:22:05,056 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles:
2022-03-22 17:22:05,056 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.activation/com.springsource.javax.activation/1.1.1
2022-03-22 17:22:05,085 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:22:05,109 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/edge-bundler-impl/3.9.1
2022-03-22 17:22:05,137 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:javax.ws.rs/javax.ws.rs-api/2.1
2022-03-22 17:22:05,172 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:22:05,202 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:22:05,234 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:22:05,284 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0
2022-03-22 17:22:05,317 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6
2022-03-22 17:22:05,375 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:commons-io/commons-io/2.1
2022-03-22 17:22:05,412 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:22:05,442 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:22:05,474 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:22:05,505 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:22:05,534 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8
2022-03-22 17:22:05,562 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:22:05,594 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8
2022-03-22 17:22:05,628 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8
2022-03-22 17:22:05,677 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:22:05,717 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:05,752 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:22:05,782 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:22:05,838 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8
2022-03-22 17:22:05,874 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8
2022-03-22 17:22:05,904 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:22:05,941 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8
2022-03-22 17:22:05,976 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8
2022-03-22 17:22:06,016 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8
2022-03-22 17:22:06,045 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8
2022-03-22 17:22:06,087 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1
2022-03-22 17:22:06,135 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5
2022-03-22 17:22:06,212 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:22:06,245 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:22:06,272 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:22:06,303 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:22:06,332 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/api-bundle/3.9.1
2022-03-22 17:22:06,377 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/app-impl/3.9.1
2022-03-22 17:22:06,413 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/application-impl/3.9.1
2022-03-22 17:22:06,445 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1
2022-03-22 17:22:06,476 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/cmdline/3.9.1
2022-03-22 17:22:06,504 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/cmdline-impl/3.9.1
2022-03-22 17:22:06,532 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/command-executor-impl/3.9.1
2022-03-22 17:22:06,565 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/core-task-impl/3.9.1
2022-03-22 17:22:06,623 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/custom-graphics-internal/3.9.1
2022-03-22 17:22:06,668 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1
2022-03-22 17:22:06,695 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/ding-presentation-impl/3.9.1
2022-03-22 17:22:06,741 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/editor-impl/3.9.1
2022-03-22 17:22:06,767 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/equations-functions-impl/3.9.1
2022-03-22 17:22:06,805 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/equations-impl/3.9.1
2022-03-22 17:22:06,844 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/event-impl/3.9.1
2022-03-22 17:22:06,868 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/filter2-impl/3.9.1
2022-03-22 17:22:06,902 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/graphml-impl/3.9.1
2022-03-22 17:22:06,931 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/group-impl/3.9.1
2022-03-22 17:22:06,964 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1
2022-03-22 17:22:06,992 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/io-impl/3.9.1
2022-03-22 17:22:07,037 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/datasource-impl/3.9.1
2022-03-22 17:22:07,060 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/jobs-impl/3.9.1
2022-03-22 17:22:07,090 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-cytoscape-impl/3.9.1
2022-03-22 17:22:07,145 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-impl/3.9.1
2022-03-22 17:22:07,169 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/layout-prefuse-impl/3.9.1
2022-03-22 17:22:07,193 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/linkout-impl/3.9.1
2022-03-22 17:22:07,219 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/manual-layout-impl/3.9.1
2022-03-22 17:22:07,242 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/model-impl/3.9.1
2022-03-22 17:22:07,494 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/presentation-impl/3.9.1
2022-03-22 17:22:07,522 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/property-impl/3.9.1
2022-03-22 17:22:07,542 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/scripting-impl/3.9.1
2022-03-22 17:22:07,571 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/search-impl/3.9.1
2022-03-22 17:22:07,596 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/session-impl/3.9.1
2022-03-22 17:22:07,618 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1
2022-03-22 17:22:07,647 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/swing-application-impl/3.9.1
2022-03-22 17:22:07,749 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/swing-util-impl/3.9.1
2022-03-22 17:22:07,780 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-browser-impl/3.9.1
2022-03-22 17:22:07,817 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-import-impl/3.9.1
2022-03-22 17:22:08,070 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/table-presentation-impl/3.9.1
2022-03-22 17:22:08,121 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape.distribution/third-party/3.9.1
2022-03-22 17:22:08,428 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/util-impl/3.9.1
2022-03-22 17:22:08,457 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-impl/3.9.1
2022-03-22 17:22:08,486 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/viewmodel-impl/3.9.1
2022-03-22 17:22:08,535 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1
2022-03-22 17:22:08,565 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/vizmap-gui-impl/3.9.1
2022-03-22 17:22:08,601 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/webservice-impl/3.9.1
2022-03-22 17:22:08,629 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/work-impl/3.9.1
2022-03-22 17:22:08,652 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.cytoscape/work-swing-impl/3.9.1
2022-03-22 17:22:08,689 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-builtins/3.13.2
2022-03-22 17:22:08,718 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-reader/3.13.2
2022-03-22 17:22:08,747 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal/3.13.2
2022-03-22 17:22:08,776 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.jline/jline-terminal-jansi/3.13.2
2022-03-22 17:22:08,802 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm/7.2
2022-03-22 17:22:08,831 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-commons/7.2
2022-03-22 17:22:08,857 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-tree/7.2
2022-03-22 17:22:08,881 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-analysis/7.2
2022-03-22 17:22:08,906 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:org.ow2.asm/asm-util/7.2
2022-03-22 17:22:08,933 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6
2022-03-22 17:22:10,481 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles:
2022-03-22 17:22:10,488 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.splash-updater-impl/3.9.1
2022-03-22 17:22:10,500 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.diagnostics-impl/3.9.1
2022-03-22 17:22:10,517 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.api/1.0.1
2022-03-22 17:22:10,521 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm/7.2.0
2022-03-22 17:22:10,526 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree/7.2.0
2022-03-22 17:22:10,531 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.commons/7.2.0
2022-03-22 17:22:10,534 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.proxy/1.1.6
2022-03-22 17:22:10,553 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.tree.analysis/7.2.0
2022-03-22 17:22:10,557 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.objectweb.asm.util/7.2.0
2022-03-22 17:22:10,561 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:22:10,630 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations
2022-03-22 17:22:10,891 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started
2022-03-22 17:22:10,892 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:22:10,920 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started
2022-03-22 17:22:10,923 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.blueprint/4.2.8
2022-03-22 17:22:10,942 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.deployer.features/4.2.8
2022-03-22 17:22:11,058 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.terminal/3.13.2
2022-03-22 17:22:11,079 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.reader/3.13.2
2022-03-22 17:22:11,089 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.config/4.2.8
2022-03-22 17:22:11,131 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:22:11,155 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started
2022-03-22 17:22:11,156 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.jline.builtins/3.13.2
2022-03-22 17:22:11,160 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.core/4.2.8
2022-03-22 17:22:11,234 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.console.osgi.Activator - Not starting local console. To activate set karaf.startLocalConsole=true
2022-03-22 17:22:11,384 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started
2022-03-22 17:22:11,385 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.features.command/4.2.8
2022-03-22 17:22:11,443 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:22:11,448 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.instance.core/4.2.8
2022-03-22 17:22:11,492 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:22:11,493 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:22:11,539 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:22:11,541 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.bundle.blueprintstate/4.2.8
2022-03-22 17:22:11,565 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.modules/4.2.8
2022-03-22 17:22:11,585 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:11,610 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:11,612 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:11,615 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:11,618 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.service.core/4.2.8
2022-03-22 17:22:11,639 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:22:11,640 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:22:11,658 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:22:11,658 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.table/4.2.8
2022-03-22 17:22:11,665 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.system.core/4.2.8
2022-03-22 17:22:11,685 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:22:11,686 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:22:11,745 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:22:11,747 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.karaf.log.core/4.2.8
2022-03-22 17:22:11,779 [features-3-thread-1] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8
2022-03-22 17:22:11,802 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.commons.io/2.1.0
2022-03-22 17:22:11,807 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.xml.stream/1.0.1
2022-03-22 17:22:11,812 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.stax-api-1.0/2.9.0
2022-03-22 17:22:11,836 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.xmlbeans/2.4.0.5
2022-03-22 17:22:11,843 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   com.springsource.javax.activation/1.1.1
2022-03-22 17:22:11,848 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxb-api-2.1/1.2.0
2022-03-22 17:22:11,870 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.bundles.jaxb-impl/2.1.6.1
2022-03-22 17:22:11,876 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.third-party/3.9.1
2022-03-22 17:22:11,884 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   uk.ac.ebi.enfin.mi.cluster/1.6.0
2022-03-22 17:22:11,891 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.saaj-api-1.3/2.9.0
2022-03-22 17:22:11,910 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.apache.servicemix.specs.jaxws-api-2.2/2.9.0
2022-03-22 17:22:11,930 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   javax.ws.rs-api/2.1.0
2022-03-22 17:22:11,940 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.api-bundle/3.9.1
2022-03-22 17:22:11,950 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline/3.9.1
2022-03-22 17:22:11,954 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.property.internal/3.9.1
2022-03-22 17:22:12,024 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.cmdline-impl/3.9.1
2022-03-22 17:22:12,032 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.event-impl/3.9.1
2022-03-22 17:22:12,045 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.util-impl/3.9.1
2022-03-22 17:22:12,066 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-impl/3.9.1
2022-03-22 17:22:12,118 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io.datasource-impl/3.9.1
2022-03-22 17:22:12,142 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.application-impl/3.9.1
2022-03-22 17:22:12,163 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration
2022-03-22 17:22:12,164 [features-3-thread-1] INFO  org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration
2022-03-22 17:22:12,181 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-util-impl/3.9.1
2022-03-22 17:22:12,239 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.model-impl/3.9.1
2022-03-22 17:22:12,680 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.presentation-impl/3.9.1
2022-03-22 17:22:12,694 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-impl/3.9.1
2022-03-22 17:22:12,731 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.work-swing-impl/3.9.1
2022-03-22 17:22:12,799 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.view.vizmap-impl/3.9.1
2022-03-22 17:22:12,897 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.viewmodel-impl/3.9.1
2022-03-22 17:22:12,954 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-impl/3.9.1
2022-03-22 17:22:12,973 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.group-impl/3.9.1
2022-03-22 17:22:13,186 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.session-impl/3.9.1
2022-03-22 17:22:13,202 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-core-impl/3.9.1
2022-03-22 17:22:13,209 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.custom-graphics-internal/3.9.1
2022-03-22 17:22:13,414 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.ding-presentation-impl/3.9.1
2022-03-22 17:22:13,613 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-presentation-impl/3.9.1
2022-03-22 17:22:13,681 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.io-impl/3.9.1
2022-03-22 17:22:13,783 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.core-task-impl/3.9.1
2022-03-22 17:22:13,976 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.command-executor-impl/3.9.1
2022-03-22 17:22:14,055 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.swing-application-impl/3.9.1
2022-03-22 17:22:15,638 [features-3-thread-1] WARN  org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist.
2022-03-22 17:22:15,933 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.jobs-impl/3.9.1
2022-03-22 17:22:16,003 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-browser-impl/3.9.1
2022-03-22 17:22:16,324 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.table-import-impl/3.9.1
2022-03-22 17:22:16,836 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.webservice-impl/3.9.1
2022-03-22 17:22:16,942 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-prefuse-impl/3.9.1
2022-03-22 17:22:16,954 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.graphml-impl/3.9.1
2022-03-22 17:22:16,965 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.filter2-impl/3.9.1
2022-03-22 17:22:17,192 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.manual-layout-impl/3.9.1
2022-03-22 17:22:17,525 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.linkout-impl/3.9.1
2022-03-22 17:22:17,554 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   edge-bundler/3.9.1
2022-03-22 17:22:17,567 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.editor-impl/3.9.1
2022-03-22 17:22:17,594 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.vizmap-gui-impl/3.9.1
2022-03-22 17:22:18,004 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2
2022-03-22 17:22:18,005 [features-3-thread-1] INFO  org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43
2022-03-22 17:22:18,302 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.search-impl/3.9.1
2022-03-22 17:22:18,326 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.layout-cytoscape-impl/3.9.1
2022-03-22 17:22:18,358 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.app-impl/3.9.1
2022-03-22 17:22:18,466 [pool-9-thread-1] INFO  org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607
2022-03-22 17:22:18,488 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:22:18,526 [features-3-thread-1] INFO  org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1]
2022-03-22 17:22:18,527 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.gui-cmdline-parser-impl/3.9.1
2022-03-22 17:22:18,552 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl -   org.cytoscape.equations-functions-impl/3.9.1
2022-03-22 17:22:18,579 [features-3-thread-1] INFO  org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener
2022-03-22 17:22:19,385 [pool-8-thread-1] INFO  org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice
2022-03-22 17:22:19,446 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: BioMart Client
2022-03-22 17:22:19,667 [features-3-thread-1] INFO  org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done.
2022-03-22 17:22:19,834 [pool-8-thread-1] INFO  org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client
2022-03-22 17:22:20,475 [Thread-17] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'.
2022-03-22 17:22:21,233 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:22:21,235 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:22:21,236 [pool-8-thread-1] WARN  org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION)
2022-03-22 17:22:21,616 [Task-Thread-1-Factory-0x30edddd9] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted.  Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@4f19ed4f
2022-03-22 17:22:21,617 [Task-Thread-1-Factory-0x30edddd9] INFO  org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@4f19ed4f
2022-03-22 17:22:21,629 [Task-Thread-3-Factory-0x30edddd9] INFO  org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3
2022-03-22 17:22:21,634 [Task-Thread-3-Factory-0x30edddd9] INFO  org.cytoscape.application.userlog - Image loading process finished in 0.008 sec.
2022-03-22 17:22:21,635 [Task-Thread-3-Factory-0x30edddd9] INFO  org.cytoscape.application.userlog - Currently,  -1 images are available.
2022-03-22 17:22:22,251 [Task-Thread-3-Factory-0x30edddd9] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.627 sec.
2022-03-22 17:22:22,524 [pool-8-thread-1] INFO  org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209
2022-03-22 17:22:24,017 [pool-83-thread-1] INFO  org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server...
2022-03-22 17:22:25,478 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3
2022-03-22 17:22:25,483 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - ========== Image saving process finished =============
2022-03-22 17:22:25,500 [Task-Thread-3-Factory-0x30edddd9] INFO  org.cytoscape.application.userlog - Image saving process finished in 0.013 sec.
2022-03-22 17:22:25,586 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Examining bundle for SPI provider: org.eclipse.jetty.http
2022-03-22 17:22:25,587 [AWT-EventQueue-0] INFO  org.cytoscape.application.userlog - #CiaoBello
2022-03-22 17:22:25,590 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Found SPI resource: bundle://138.0:0/META-INF/services/org.eclipse.jetty.http.HttpFieldPreEncoder
2022-03-22 17:22:25,621 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8
2022-03-22 17:22:25,644 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Loaded SPI provider: class org.eclipse.jetty.http.Http1FieldPreEncoder
2022-03-22 17:22:25,647 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Registered service: org.apache.felix.framework.ServiceRegistrationImpl@e344451
2022-03-22 17:22:25,648 [pool-83-thread-1] INFO  org.apache.aries.spifly.BaseActivator - Registered provider: org.eclipse.jetty.http.HttpFieldPreEncoder in bundle org.eclipse.jetty.http
2022-03-22 17:22:25,649 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1
2022-03-22 17:22:25,657 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8
2022-03-22 17:22:25,670 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1
2022-03-22 17:22:25,684 [FelixShutdown] INFO  org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2
2022-03-22 17:22:25,733 [FelixStartLevel] INFO  org.apache.aries.spifly.BaseActivator - Unregistered: org.apache.felix.framework.ServiceRegistrationImpl@e344451
2022-03-22 17:22:25,806 [FelixStartLevel] INFO  org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2...
2022-03-22 17:22:25,811 [pool-83-thread-1] ERROR org.cytoscape.rest.internal.CyActivator - Failed to initialize cyREST server.
org.osgi.framework.BundleException: The framework has been shutdown.
	at org.apache.felix.framework.Felix.installBundle(Felix.java:2995) ~[?:?]
	at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:167) ~[?:?]
	at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:140) ~[?:?]
	at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installFeature(OSGiJAXRSManager.java:156) ~[!/:?]
	at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installOSGiJAXRSBundles(OSGiJAXRSManager.java:114) ~[!/:?]
	at org.cytoscape.rest.internal.CyActivator.lambda$startCyREST$0(CyActivator.java:325) [!/:?]
	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) [?:?]
	at java.util.concurrent.FutureTask.run(FutureTask.java:264) [?:?]
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) [?:?]
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) [?:?]
	at java.lang.Thread.run(Thread.java:834) [?:?]
2022-03-22 17:22:25,887 [FelixStartLevel] INFO  org.cytoscape.rest.internal.CyActivator - Shutting down REST server...
2022-03-22 17:22:26,743 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8
2022-03-22 17:22:26,752 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8
2022-03-22 17:22:26,753 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8
2022-03-22 17:22:26,754 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8
2022-03-22 17:22:26,755 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8
2022-03-22 17:22:26,756 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8
2022-03-22 17:22:26,758 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8
2022-03-22 17:22:26,759 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8
2022-03-22 17:22:26,760 [FelixStartLevel] INFO  org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8