2022-04-06 13:43:12,090 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.config.cfg 2022-04-06 13:43:12,134 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg 2022-04-06 13:43:12,163 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg 2022-04-06 13:43:12,193 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg 2022-04-06 13:43:12,233 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg 2022-04-06 13:43:12,267 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg 2022-04-06 13:43:12,300 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg 2022-04-06 13:43:13,798 [activator-1-thread-2] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1] 2022-04-06 13:43:14,610 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform: 2022-04-06 13:43:14,611 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Region: root 2022-04-06 13:43:14,611 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Bundles to install: 2022-04-06 13:43:14,611 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-04-06 13:43:14,611 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:43:14,612 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-04-06 13:43:14,612 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-04-06 13:43:14,612 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:43:14,612 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:43:14,612 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:43:14,612 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-04-06 13:43:14,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-04-06 13:43:14,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-04-06 13:43:14,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:43:14,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:43:14,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:43:14,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:43:14,614 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-04-06 13:43:14,614 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:43:14,614 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-04-06 13:43:14,614 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-04-06 13:43:14,614 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:43:14,614 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:43:14,615 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:43:14,615 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:43:14,615 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-04-06 13:43:14,615 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-04-06 13:43:14,615 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:43:14,616 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-04-06 13:43:14,616 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-04-06 13:43:14,616 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-04-06 13:43:14,616 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-04-06 13:43:14,616 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-04-06 13:43:14,616 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-04-06 13:43:14,617 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:43:14,617 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:43:14,617 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:43:14,617 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:43:14,617 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-04-06 13:43:14,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-04-06 13:43:14,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-04-06 13:43:14,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-04-06 13:43:14,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-04-06 13:43:14,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-04-06 13:43:14,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-04-06 13:43:14,619 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-04-06 13:43:14,619 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-04-06 13:43:14,619 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-04-06 13:43:14,619 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-04-06 13:43:14,619 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-04-06 13:43:14,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-04-06 13:43:14,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-04-06 13:43:14,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-04-06 13:43:14,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-04-06 13:43:14,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-04-06 13:43:14,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-04-06 13:43:14,621 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-04-06 13:43:14,621 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-04-06 13:43:14,621 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-04-06 13:43:14,621 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-04-06 13:43:14,621 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-04-06 13:43:14,621 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-04-06 13:43:14,622 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-04-06 13:43:14,622 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-04-06 13:43:14,622 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-04-06 13:43:14,622 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-04-06 13:43:14,622 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-04-06 13:43:14,622 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-04-06 13:43:14,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-04-06 13:43:14,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-04-06 13:43:14,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-04-06 13:43:14,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-04-06 13:43:14,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-04-06 13:43:14,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-04-06 13:43:14,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-04-06 13:43:14,624 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-04-06 13:43:14,624 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-04-06 13:43:14,624 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-04-06 13:43:14,624 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-04-06 13:43:14,624 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-04-06 13:43:14,624 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-04-06 13:43:14,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-04-06 13:43:14,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-04-06 13:43:14,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-04-06 13:43:14,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-04-06 13:43:14,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-04-06 13:43:14,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-04-06 13:43:14,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-04-06 13:43:14,626 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-04-06 13:43:14,626 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-04-06 13:43:14,626 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-04-06 13:43:14,626 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-04-06 13:43:14,627 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-04-06 13:43:14,627 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-04-06 13:43:14,627 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-04-06 13:43:14,627 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-04-06 13:43:14,631 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles: 2022-04-06 13:43:14,631 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-04-06 13:43:14,666 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:43:14,692 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-04-06 13:43:14,715 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-04-06 13:43:14,748 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:43:14,771 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:43:14,796 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:43:14,832 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-04-06 13:43:14,854 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-04-06 13:43:14,886 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-04-06 13:43:14,916 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:43:14,938 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:43:14,968 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:43:14,990 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:43:15,026 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-04-06 13:43:15,086 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:43:15,118 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-04-06 13:43:15,141 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-04-06 13:43:15,169 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:43:15,193 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:43:15,220 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:43:15,244 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:43:15,291 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-04-06 13:43:15,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-04-06 13:43:15,340 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:43:15,369 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-04-06 13:43:15,398 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-04-06 13:43:15,436 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-04-06 13:43:15,461 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-04-06 13:43:15,494 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-04-06 13:43:15,563 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-04-06 13:43:15,697 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:43:15,735 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:43:15,758 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:43:15,780 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:43:15,801 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-04-06 13:43:15,842 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-04-06 13:43:15,878 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-04-06 13:43:15,898 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-04-06 13:43:15,921 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-04-06 13:43:15,943 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-04-06 13:43:15,964 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-04-06 13:43:15,989 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-04-06 13:43:16,042 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-04-06 13:43:16,079 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-04-06 13:43:16,101 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-04-06 13:43:16,148 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-04-06 13:43:16,171 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-04-06 13:43:16,192 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-04-06 13:43:16,216 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-04-06 13:43:16,236 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-04-06 13:43:16,264 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-04-06 13:43:16,288 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-04-06 13:43:16,315 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-04-06 13:43:16,336 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-04-06 13:43:16,367 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-04-06 13:43:16,388 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-04-06 13:43:16,411 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-04-06 13:43:16,441 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-04-06 13:43:16,461 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-04-06 13:43:16,484 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-04-06 13:43:16,509 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-04-06 13:43:16,531 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-04-06 13:43:16,779 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-04-06 13:43:16,804 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-04-06 13:43:16,827 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-04-06 13:43:16,850 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-04-06 13:43:16,873 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-04-06 13:43:16,896 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-04-06 13:43:16,920 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-04-06 13:43:17,009 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-04-06 13:43:17,033 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-04-06 13:43:17,063 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-04-06 13:43:17,296 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-04-06 13:43:17,342 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-04-06 13:43:17,641 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-04-06 13:43:17,666 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-04-06 13:43:17,691 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-04-06 13:43:17,730 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-04-06 13:43:17,753 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-04-06 13:43:17,791 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-04-06 13:43:17,815 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-04-06 13:43:17,847 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-04-06 13:43:17,877 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-04-06 13:43:17,908 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-04-06 13:43:17,941 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-04-06 13:43:17,972 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-04-06 13:43:17,996 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-04-06 13:43:18,025 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-04-06 13:43:18,054 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-04-06 13:43:18,078 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-04-06 13:43:18,104 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-04-06 13:43:18,131 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-04-06 13:43:19,497 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles: 2022-04-06 13:43:19,501 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.splash-updater-impl/3.9.1 2022-04-06 13:43:19,510 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.diagnostics-impl/3.9.1 2022-04-06 13:43:19,524 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm/7.2.0 2022-04-06 13:43:19,528 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:43:19,533 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree/7.2.0 2022-04-06 13:43:19,537 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.commons/7.2.0 2022-04-06 13:43:19,540 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.proxy/1.1.6 2022-04-06 13:43:19,554 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:43:19,633 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations 2022-04-06 13:43:19,846 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started 2022-04-06 13:43:19,846 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:43:19,873 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started 2022-04-06 13:43:19,873 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree.analysis/7.2.0 2022-04-06 13:43:19,878 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.util/7.2.0 2022-04-06 13:43:19,885 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:43:19,899 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:43:19,919 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.terminal/3.13.2 2022-04-06 13:43:19,925 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.reader/3.13.2 2022-04-06 13:43:19,930 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.builtins/3.13.2 2022-04-06 13:43:19,935 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.table/4.2.8 2022-04-06 13:43:19,940 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.core/4.2.8 2022-04-06 13:43:20,419 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started 2022-04-06 13:43:20,420 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.log.core/4.2.8 2022-04-06 13:43:20,473 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:43:20,475 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.service.core/4.2.8 2022-04-06 13:43:20,496 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8 2022-04-06 13:43:20,497 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.features.command/4.2.8 2022-04-06 13:43:20,525 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8 2022-04-06 13:43:20,526 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.instance.core/4.2.8 2022-04-06 13:43:20,563 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-04-06 13:43:20,564 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:43:20,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:43:20,609 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started 2022-04-06 13:43:20,610 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:43:20,628 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:43:20,658 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:43:20,661 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:43:20,684 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:43:20,686 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:43:20,702 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:43:20,703 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:43:20,730 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:43:20,731 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:43:20,773 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:43:20,775 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.system.core/4.2.8 2022-04-06 13:43:20,800 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8 2022-04-06 13:43:20,800 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:43:20,842 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:43:20,849 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:43:20,871 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.xmlbeans/2.4.0.5 2022-04-06 13:43:20,878 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.commons.io/2.1.0 2022-04-06 13:43:20,885 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.activation/1.1.1 2022-04-06 13:43:20,891 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:43:20,909 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.jaxb-impl/2.1.6.1 2022-04-06 13:43:20,914 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - uk.ac.ebi.enfin.mi.cluster/1.6.0 2022-04-06 13:43:20,920 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.third-party/3.9.1 2022-04-06 13:43:20,932 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:43:20,952 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:43:20,973 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - javax.ws.rs-api/2.1.0 2022-04-06 13:43:20,981 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline/3.9.1 2022-04-06 13:43:20,987 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.api-bundle/3.9.1 2022-04-06 13:43:20,997 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.property.internal/3.9.1 2022-04-06 13:43:21,059 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline-impl/3.9.1 2022-04-06 13:43:21,068 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.event-impl/3.9.1 2022-04-06 13:43:21,081 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.util-impl/3.9.1 2022-04-06 13:43:21,101 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io.datasource-impl/3.9.1 2022-04-06 13:43:21,123 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-impl/3.9.1 2022-04-06 13:43:21,177 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.application-impl/3.9.1 2022-04-06 13:43:21,192 [features-3-thread-1] INFO org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration 2022-04-06 13:43:21,194 [features-3-thread-1] INFO org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration 2022-04-06 13:43:21,214 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-util-impl/3.9.1 2022-04-06 13:43:21,271 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-impl/3.9.1 2022-04-06 13:43:21,298 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.model-impl/3.9.1 2022-04-06 13:43:21,687 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.presentation-impl/3.9.1 2022-04-06 13:43:21,700 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-swing-impl/3.9.1 2022-04-06 13:43:21,746 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.viewmodel-impl/3.9.1 2022-04-06 13:43:21,803 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.view.vizmap-impl/3.9.1 2022-04-06 13:43:21,887 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-impl/3.9.1 2022-04-06 13:43:21,904 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.group-impl/3.9.1 2022-04-06 13:43:22,073 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-core-impl/3.9.1 2022-04-06 13:43:22,087 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.session-impl/3.9.1 2022-04-06 13:43:22,102 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.custom-graphics-internal/3.9.1 2022-04-06 13:43:22,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-presentation-impl/3.9.1 2022-04-06 13:43:22,352 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.ding-presentation-impl/3.9.1 2022-04-06 13:43:22,575 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io-impl/3.9.1 2022-04-06 13:43:22,663 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.core-task-impl/3.9.1 2022-04-06 13:43:22,828 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.command-executor-impl/3.9.1 2022-04-06 13:43:22,886 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-application-impl/3.9.1 2022-04-06 13:43:24,151 [features-3-thread-1] WARN org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist. 2022-04-06 13:43:24,410 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.jobs-impl/3.9.1 2022-04-06 13:43:24,474 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-browser-impl/3.9.1 2022-04-06 13:43:24,763 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - edge-bundler/3.9.1 2022-04-06 13:43:24,774 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-prefuse-impl/3.9.1 2022-04-06 13:43:24,789 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-import-impl/3.9.1 2022-04-06 13:43:25,283 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.linkout-impl/3.9.1 2022-04-06 13:43:25,314 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-cytoscape-impl/3.9.1 2022-04-06 13:43:25,348 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.search-impl/3.9.1 2022-04-06 13:43:25,376 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.editor-impl/3.9.1 2022-04-06 13:43:25,402 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.webservice-impl/3.9.1 2022-04-06 13:43:25,494 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-impl/3.9.1 2022-04-06 13:43:25,874 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2 2022-04-06 13:43:25,875 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43 2022-04-06 13:43:26,198 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.graphml-impl/3.9.1 2022-04-06 13:43:26,209 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.manual-layout-impl/3.9.1 2022-04-06 13:43:26,354 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.filter2-impl/3.9.1 2022-04-06 13:43:26,566 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.app-impl/3.9.1 2022-04-06 13:43:26,689 [pool-10-thread-1] INFO org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607 2022-04-06 13:43:26,705 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.scripting-impl/3.9.1 2022-04-06 13:43:26,732 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1] 2022-04-06 13:43:26,733 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.gui-cmdline-parser-impl/3.9.1 2022-04-06 13:43:26,752 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-functions-impl/3.9.1 2022-04-06 13:43:26,773 [features-3-thread-1] INFO org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener 2022-04-06 13:43:27,586 [pool-9-thread-1] INFO org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice 2022-04-06 13:43:27,640 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: BioMart Client 2022-04-06 13:43:28,110 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done. 2022-04-06 13:43:28,498 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:43:28,500 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:43:28,501 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:43:28,517 [Thread-16] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'. 2022-04-06 13:43:29,365 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client 2022-04-06 13:43:29,545 [Task-Thread-1-Factory-0x51697afd] INFO org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted. Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@173292d3 2022-04-06 13:43:29,546 [Task-Thread-1-Factory-0x51697afd] INFO org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@173292d3 2022-04-06 13:43:29,559 [Task-Thread-3-Factory-0x51697afd] INFO org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3 2022-04-06 13:43:29,564 [Task-Thread-3-Factory-0x51697afd] INFO org.cytoscape.application.userlog - Image loading process finished in 0.012 sec. 2022-04-06 13:43:29,565 [Task-Thread-3-Factory-0x51697afd] INFO org.cytoscape.application.userlog - Currently, -1 images are available. 2022-04-06 13:43:30,232 [Task-Thread-3-Factory-0x51697afd] INFO org.cytoscape.application.userlog - Image saving process finished in 0.68 sec. 2022-04-06 13:43:31,934 [pool-9-thread-1] INFO org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209 2022-04-06 13:43:31,973 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server... 2022-04-06 13:43:33,641 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Examining bundle for SPI provider: org.eclipse.jetty.http 2022-04-06 13:43:33,645 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Found SPI resource: bundle://138.0:0/META-INF/services/org.eclipse.jetty.http.HttpFieldPreEncoder 2022-04-06 13:43:33,686 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Loaded SPI provider: class org.eclipse.jetty.http.Http1FieldPreEncoder 2022-04-06 13:43:33,688 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered service: org.apache.felix.framework.ServiceRegistrationImpl@696af431 2022-04-06 13:43:33,689 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered provider: org.eclipse.jetty.http.HttpFieldPreEncoder in bundle org.eclipse.jetty.http 2022-04-06 13:43:34,629 [pool-84-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.http.core/4.2.8. Missing service: [org.apache.karaf.http.core.ServletService, org.apache.karaf.http.core.ProxyService] 2022-04-06 13:43:35,004 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:43:35,013 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:43:35,039 [activator-1-thread-3] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:43:36,321 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3 2022-04-06 13:43:36,325 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - ========== Image saving process finished ============= 2022-04-06 13:43:36,342 [Task-Thread-3-Factory-0x51697afd] INFO org.cytoscape.application.userlog - Image saving process finished in 0.015 sec. 2022-04-06 13:43:36,421 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - #CiaoBello 2022-04-06 13:43:36,451 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8 2022-04-06 13:43:36,471 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1 2022-04-06 13:43:36,480 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:43:36,491 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:43:36,505 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:43:36,654 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:43:36,827 [FelixStartLevel] INFO org.apache.aries.spifly.BaseActivator - Unregistered: org.apache.felix.framework.ServiceRegistrationImpl@696af431 2022-04-06 13:43:36,910 [FelixStartLevel] INFO org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2... 2022-04-06 13:43:36,953 [FelixStartLevel] INFO org.cytoscape.rest.internal.CyActivator - Shutting down REST server... 2022-04-06 13:43:36,978 [pool-84-thread-1] ERROR org.cytoscape.rest.internal.CyActivator - Failed to initialize cyREST server. java.lang.IllegalStateException: Invalid BundleContext. at org.apache.felix.framework.BundleContextImpl.checkValidity(BundleContextImpl.java:511) ~[?:?] at org.apache.felix.framework.BundleContextImpl.registerService(BundleContextImpl.java:328) ~[?:?] at org.apache.felix.framework.BundleContextImpl.registerService(BundleContextImpl.java:322) ~[?:?] at org.cytoscape.rest.internal.task.ResourceManager.registerResourceServices(ResourceManager.java:74) ~[!/:?] at org.cytoscape.rest.internal.CyActivator.lambda$startCyREST$0(CyActivator.java:327) [!/:?] at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) [?:?] at java.util.concurrent.FutureTask.run(FutureTask.java:264) [?:?] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) [?:?] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) [?:?] at java.lang.Thread.run(Thread.java:829) [?:?] 2022-04-06 13:43:37,571 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8 2022-04-06 13:43:37,586 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:43:37,587 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8 2022-04-06 13:43:37,588 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:43:37,589 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:43:37,591 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-04-06 13:43:37,592 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:43:37,594 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:43:37,596 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8 2022-04-06 13:52:43,976 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg 2022-04-06 13:52:44,031 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg 2022-04-06 13:52:44,136 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg 2022-04-06 13:52:44,181 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg 2022-04-06 13:52:44,225 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg 2022-04-06 13:52:44,258 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg 2022-04-06 13:52:45,699 [activator-1-thread-2] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1] 2022-04-06 13:52:46,512 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform: 2022-04-06 13:52:46,513 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Region: root 2022-04-06 13:52:46,513 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Bundles to install: 2022-04-06 13:52:46,513 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-04-06 13:52:46,513 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:52:46,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-04-06 13:52:46,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-04-06 13:52:46,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:52:46,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:52:46,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:52:46,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-04-06 13:52:46,515 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-04-06 13:52:46,515 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-04-06 13:52:46,515 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:52:46,515 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:52:46,515 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:52:46,515 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:52:46,516 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-04-06 13:52:46,516 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:52:46,516 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-04-06 13:52:46,516 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-04-06 13:52:46,516 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:52:46,517 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:52:46,517 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:52:46,517 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:52:46,517 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-04-06 13:52:46,517 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-04-06 13:52:46,518 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:52:46,518 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-04-06 13:52:46,518 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-04-06 13:52:46,518 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-04-06 13:52:46,518 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-04-06 13:52:46,518 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-04-06 13:52:46,519 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-04-06 13:52:46,519 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:52:46,519 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:52:46,519 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:52:46,519 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:52:46,520 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-04-06 13:52:46,520 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-04-06 13:52:46,520 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-04-06 13:52:46,520 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-04-06 13:52:46,520 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-04-06 13:52:46,520 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-04-06 13:52:46,521 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-04-06 13:52:46,521 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-04-06 13:52:46,521 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-04-06 13:52:46,521 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-04-06 13:52:46,521 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-04-06 13:52:46,522 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-04-06 13:52:46,522 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-04-06 13:52:46,522 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-04-06 13:52:46,522 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-04-06 13:52:46,522 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-04-06 13:52:46,523 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-04-06 13:52:46,523 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-04-06 13:52:46,523 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-04-06 13:52:46,523 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-04-06 13:52:46,523 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-04-06 13:52:46,524 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-04-06 13:52:46,524 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-04-06 13:52:46,524 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-04-06 13:52:46,524 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-04-06 13:52:46,524 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-04-06 13:52:46,524 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-04-06 13:52:46,525 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-04-06 13:52:46,525 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-04-06 13:52:46,525 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-04-06 13:52:46,525 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-04-06 13:52:46,525 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-04-06 13:52:46,525 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-04-06 13:52:46,526 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-04-06 13:52:46,526 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-04-06 13:52:46,526 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-04-06 13:52:46,526 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-04-06 13:52:46,526 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-04-06 13:52:46,526 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-04-06 13:52:46,527 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-04-06 13:52:46,527 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-04-06 13:52:46,528 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-04-06 13:52:46,528 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-04-06 13:52:46,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-04-06 13:52:46,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-04-06 13:52:46,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-04-06 13:52:46,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-04-06 13:52:46,530 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-04-06 13:52:46,530 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-04-06 13:52:46,530 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-04-06 13:52:46,530 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-04-06 13:52:46,530 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-04-06 13:52:46,530 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-04-06 13:52:46,531 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-04-06 13:52:46,531 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-04-06 13:52:46,531 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-04-06 13:52:46,531 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-04-06 13:52:46,531 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-04-06 13:52:46,534 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles: 2022-04-06 13:52:46,535 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-04-06 13:52:46,562 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:52:46,593 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-04-06 13:52:46,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-04-06 13:52:46,649 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:52:46,681 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:52:46,712 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:52:46,750 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-04-06 13:52:46,776 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-04-06 13:52:46,819 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-04-06 13:52:46,856 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:52:46,884 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:52:46,918 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:52:46,946 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:52:46,970 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-04-06 13:52:46,993 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:52:47,021 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-04-06 13:52:47,046 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-04-06 13:52:47,076 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:52:47,104 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:52:47,130 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:52:47,159 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:52:47,211 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-04-06 13:52:47,240 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-04-06 13:52:47,268 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:52:47,294 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-04-06 13:52:47,326 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-04-06 13:52:47,370 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-04-06 13:52:47,399 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-04-06 13:52:47,428 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-04-06 13:52:47,472 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-04-06 13:52:47,550 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:52:47,579 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:52:47,608 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:52:47,632 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:52:47,657 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-04-06 13:52:47,700 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-04-06 13:52:47,737 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-04-06 13:52:47,762 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-04-06 13:52:47,798 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-04-06 13:52:47,822 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-04-06 13:52:47,847 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-04-06 13:52:47,876 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-04-06 13:52:47,928 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-04-06 13:52:47,972 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-04-06 13:52:47,999 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-04-06 13:52:48,050 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-04-06 13:52:48,078 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-04-06 13:52:48,104 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-04-06 13:52:48,137 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-04-06 13:52:48,161 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-04-06 13:52:48,194 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-04-06 13:52:48,224 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-04-06 13:52:48,256 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-04-06 13:52:48,281 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-04-06 13:52:48,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-04-06 13:52:48,344 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-04-06 13:52:48,368 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-04-06 13:52:48,400 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-04-06 13:52:48,424 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-04-06 13:52:48,450 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-04-06 13:52:48,474 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-04-06 13:52:48,498 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-04-06 13:52:48,728 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-04-06 13:52:48,751 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-04-06 13:52:48,771 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-04-06 13:52:48,807 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-04-06 13:52:48,833 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-04-06 13:52:48,860 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-04-06 13:52:48,883 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-04-06 13:52:48,975 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-04-06 13:52:49,016 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-04-06 13:52:49,051 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-04-06 13:52:49,296 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-04-06 13:52:49,343 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-04-06 13:52:49,655 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-04-06 13:52:49,683 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-04-06 13:52:49,709 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-04-06 13:52:49,748 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-04-06 13:52:49,771 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-04-06 13:52:49,831 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-04-06 13:52:49,854 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-04-06 13:52:49,885 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-04-06 13:52:49,915 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-04-06 13:52:49,946 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-04-06 13:52:49,985 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-04-06 13:52:50,019 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-04-06 13:52:50,043 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-04-06 13:52:50,073 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-04-06 13:52:50,098 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-04-06 13:52:50,124 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-04-06 13:52:50,149 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-04-06 13:52:50,174 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-04-06 13:52:51,810 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles: 2022-04-06 13:52:51,814 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.splash-updater-impl/3.9.1 2022-04-06 13:52:51,824 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.diagnostics-impl/3.9.1 2022-04-06 13:52:51,839 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm/7.2.0 2022-04-06 13:52:51,844 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree/7.2.0 2022-04-06 13:52:51,849 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree.analysis/7.2.0 2022-04-06 13:52:51,855 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.util/7.2.0 2022-04-06 13:52:51,860 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:52:51,865 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.commons/7.2.0 2022-04-06 13:52:51,869 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.proxy/1.1.6 2022-04-06 13:52:51,884 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:52:51,942 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations 2022-04-06 13:52:52,157 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started 2022-04-06 13:52:52,157 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:52:52,188 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started 2022-04-06 13:52:52,190 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:52:52,212 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:52:52,234 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.terminal/3.13.2 2022-04-06 13:52:52,239 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.reader/3.13.2 2022-04-06 13:52:52,247 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.builtins/3.13.2 2022-04-06 13:52:52,253 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.core/4.2.8 2022-04-06 13:52:52,856 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started 2022-04-06 13:52:52,857 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.log.core/4.2.8 2022-04-06 13:52:52,918 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:52:52,921 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.system.core/4.2.8 2022-04-06 13:52:52,951 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8 2022-04-06 13:52:52,951 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:52:53,002 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:52:53,004 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:52:53,027 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:52:53,028 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:52:53,052 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:52:53,077 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.features.command/4.2.8 2022-04-06 13:52:53,114 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8 2022-04-06 13:52:53,116 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.instance.core/4.2.8 2022-04-06 13:52:53,157 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-04-06 13:52:53,159 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:52:53,179 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started 2022-04-06 13:52:53,180 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.service.core/4.2.8 2022-04-06 13:52:53,198 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8 2022-04-06 13:52:53,198 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:52:53,221 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:52:53,245 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:52:53,247 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:52:53,249 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:52:53,251 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.table/4.2.8 2022-04-06 13:52:53,258 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:52:53,282 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:52:53,295 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:52:53,301 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.activation/1.1.1 2022-04-06 13:52:53,308 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:52:53,329 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:52:53,349 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.commons.io/2.1.0 2022-04-06 13:52:53,356 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:52:53,374 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:52:53,392 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.jaxb-impl/2.1.6.1 2022-04-06 13:52:53,399 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - uk.ac.ebi.enfin.mi.cluster/1.6.0 2022-04-06 13:52:53,405 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.third-party/3.9.1 2022-04-06 13:52:53,413 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.xmlbeans/2.4.0.5 2022-04-06 13:52:53,419 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - javax.ws.rs-api/2.1.0 2022-04-06 13:52:53,425 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline/3.9.1 2022-04-06 13:52:53,430 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.api-bundle/3.9.1 2022-04-06 13:52:53,440 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline-impl/3.9.1 2022-04-06 13:52:53,449 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.event-impl/3.9.1 2022-04-06 13:52:53,461 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.property.internal/3.9.1 2022-04-06 13:52:53,520 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.util-impl/3.9.1 2022-04-06 13:52:53,539 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io.datasource-impl/3.9.1 2022-04-06 13:52:53,559 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-impl/3.9.1 2022-04-06 13:52:53,608 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.application-impl/3.9.1 2022-04-06 13:52:53,623 [features-3-thread-1] INFO org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration 2022-04-06 13:52:53,625 [features-3-thread-1] INFO org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration 2022-04-06 13:52:53,639 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-util-impl/3.9.1 2022-04-06 13:52:53,700 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-swing-impl/3.9.1 2022-04-06 13:52:53,754 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.model-impl/3.9.1 2022-04-06 13:52:54,175 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.presentation-impl/3.9.1 2022-04-06 13:52:54,190 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-impl/3.9.1 2022-04-06 13:52:54,214 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.view.vizmap-impl/3.9.1 2022-04-06 13:52:54,300 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.viewmodel-impl/3.9.1 2022-04-06 13:52:54,359 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-impl/3.9.1 2022-04-06 13:52:54,373 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.group-impl/3.9.1 2022-04-06 13:52:54,549 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-core-impl/3.9.1 2022-04-06 13:52:54,556 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.session-impl/3.9.1 2022-04-06 13:52:54,570 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.custom-graphics-internal/3.9.1 2022-04-06 13:52:54,761 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.ding-presentation-impl/3.9.1 2022-04-06 13:52:54,923 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-presentation-impl/3.9.1 2022-04-06 13:52:55,000 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io-impl/3.9.1 2022-04-06 13:52:55,092 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.core-task-impl/3.9.1 2022-04-06 13:52:55,256 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.command-executor-impl/3.9.1 2022-04-06 13:52:55,325 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-application-impl/3.9.1 2022-04-06 13:52:56,664 [features-3-thread-1] WARN org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist. 2022-04-06 13:52:56,962 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.jobs-impl/3.9.1 2022-04-06 13:52:57,035 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-impl/3.9.1 2022-04-06 13:52:57,479 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2 2022-04-06 13:52:57,480 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43 2022-04-06 13:52:57,829 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.graphml-impl/3.9.1 2022-04-06 13:52:57,841 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.filter2-impl/3.9.1 2022-04-06 13:52:58,086 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - edge-bundler/3.9.1 2022-04-06 13:52:58,102 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.webservice-impl/3.9.1 2022-04-06 13:52:58,200 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.editor-impl/3.9.1 2022-04-06 13:52:58,225 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-browser-impl/3.9.1 2022-04-06 13:52:58,470 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.linkout-impl/3.9.1 2022-04-06 13:52:58,501 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.manual-layout-impl/3.9.1 2022-04-06 13:52:58,671 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-cytoscape-impl/3.9.1 2022-04-06 13:52:58,702 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.search-impl/3.9.1 2022-04-06 13:52:58,728 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-prefuse-impl/3.9.1 2022-04-06 13:52:58,837 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-import-impl/3.9.1 2022-04-06 13:52:59,347 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.app-impl/3.9.1 2022-04-06 13:52:59,474 [pool-10-thread-1] INFO org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607 2022-04-06 13:52:59,489 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.scripting-impl/3.9.1 2022-04-06 13:52:59,517 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1] 2022-04-06 13:52:59,519 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.gui-cmdline-parser-impl/3.9.1 2022-04-06 13:52:59,540 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-functions-impl/3.9.1 2022-04-06 13:52:59,558 [features-3-thread-1] INFO org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener 2022-04-06 13:53:01,191 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done. 2022-04-06 13:53:01,770 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client 2022-04-06 13:53:02,205 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:53:02,207 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:53:02,208 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:53:02,236 [pool-9-thread-1] INFO org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice 2022-04-06 13:53:02,288 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: BioMart Client 2022-04-06 13:53:02,443 [Thread-16] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'. 2022-04-06 13:53:02,637 [Task-Thread-1-Factory-0x46568903] INFO org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted. Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@4d8a785d 2022-04-06 13:53:02,637 [Task-Thread-1-Factory-0x46568903] INFO org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@4d8a785d 2022-04-06 13:53:02,650 [Task-Thread-3-Factory-0x46568903] INFO org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3 2022-04-06 13:53:02,659 [Task-Thread-3-Factory-0x46568903] INFO org.cytoscape.application.userlog - Image loading process finished in 0.012 sec. 2022-04-06 13:53:02,660 [Task-Thread-3-Factory-0x46568903] INFO org.cytoscape.application.userlog - Currently, -1 images are available. 2022-04-06 13:53:03,239 [Task-Thread-3-Factory-0x46568903] INFO org.cytoscape.application.userlog - Image saving process finished in 0.592 sec. 2022-04-06 13:53:04,464 [pool-9-thread-1] INFO org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209 2022-04-06 13:53:05,193 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server... 2022-04-06 13:53:06,233 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3 2022-04-06 13:53:06,236 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - ========== Image saving process finished ============= 2022-04-06 13:53:06,256 [Task-Thread-3-Factory-0x46568903] INFO org.cytoscape.application.userlog - Image saving process finished in 0.014 sec. 2022-04-06 13:53:06,343 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - #CiaoBello 2022-04-06 13:53:06,363 [pool-84-thread-1] ERROR org.cytoscape.rest.internal.CyActivator - Failed to initialize cyREST server. org.osgi.framework.BundleException: The framework has been shutdown. at org.apache.felix.framework.Felix.installBundle(Felix.java:2995) ~[?:?] at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:167) ~[?:?] at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:140) ~[?:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installFeature(OSGiJAXRSManager.java:156) ~[!/:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installOSGiJAXRSBundles(OSGiJAXRSManager.java:113) ~[!/:?] at org.cytoscape.rest.internal.CyActivator.lambda$startCyREST$0(CyActivator.java:325) [!/:?] at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) [?:?] at java.util.concurrent.FutureTask.run(FutureTask.java:264) [?:?] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) [?:?] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) [?:?] at java.lang.Thread.run(Thread.java:829) [?:?] 2022-04-06 13:53:06,386 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8 2022-04-06 13:53:06,404 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1 2022-04-06 13:53:06,413 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:53:06,424 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:53:06,439 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:53:06,496 [FelixStartLevel] INFO org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2... 2022-04-06 13:53:06,578 [FelixStartLevel] INFO org.cytoscape.rest.internal.CyActivator - Shutting down REST server... 2022-04-06 13:53:07,256 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8 2022-04-06 13:53:07,272 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:53:07,275 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-04-06 13:53:07,276 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8 2022-04-06 13:53:07,277 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:53:07,279 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8 2022-04-06 13:53:07,283 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:53:07,284 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:53:07,285 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:55:03,709 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.config.cfg 2022-04-06 13:55:03,742 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg 2022-04-06 13:55:03,771 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg 2022-04-06 13:55:03,803 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg 2022-04-06 13:55:03,835 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg 2022-04-06 13:55:03,871 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg 2022-04-06 13:55:03,908 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg 2022-04-06 13:55:05,401 [activator-1-thread-2] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1] 2022-04-06 13:55:06,271 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform: 2022-04-06 13:55:06,272 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Region: root 2022-04-06 13:55:06,272 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Bundles to install: 2022-04-06 13:55:06,272 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-04-06 13:55:06,272 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:55:06,272 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-04-06 13:55:06,273 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-04-06 13:55:06,273 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:55:06,273 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:55:06,273 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:55:06,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-04-06 13:55:06,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-04-06 13:55:06,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-04-06 13:55:06,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:55:06,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:55:06,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:55:06,275 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:55:06,275 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-04-06 13:55:06,275 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:55:06,275 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-04-06 13:55:06,275 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-04-06 13:55:06,276 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:55:06,276 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:55:06,276 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:55:06,276 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:55:06,276 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-04-06 13:55:06,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-04-06 13:55:06,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:55:06,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-04-06 13:55:06,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-04-06 13:55:06,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-04-06 13:55:06,278 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-04-06 13:55:06,278 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-04-06 13:55:06,278 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-04-06 13:55:06,278 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:55:06,278 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:55:06,279 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:55:06,279 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:55:06,279 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-04-06 13:55:06,279 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-04-06 13:55:06,279 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-04-06 13:55:06,280 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-04-06 13:55:06,280 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-04-06 13:55:06,280 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-04-06 13:55:06,280 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-04-06 13:55:06,280 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-04-06 13:55:06,281 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-04-06 13:55:06,281 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-04-06 13:55:06,281 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-04-06 13:55:06,281 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-04-06 13:55:06,281 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-04-06 13:55:06,282 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-04-06 13:55:06,282 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-04-06 13:55:06,282 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-04-06 13:55:06,282 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-04-06 13:55:06,282 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-04-06 13:55:06,282 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-04-06 13:55:06,283 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-04-06 13:55:06,283 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-04-06 13:55:06,283 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-04-06 13:55:06,283 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-04-06 13:55:06,283 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-04-06 13:55:06,283 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-04-06 13:55:06,284 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-04-06 13:55:06,284 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-04-06 13:55:06,284 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-04-06 13:55:06,284 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-04-06 13:55:06,284 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-04-06 13:55:06,284 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-04-06 13:55:06,285 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-04-06 13:55:06,285 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-04-06 13:55:06,285 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-04-06 13:55:06,285 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-04-06 13:55:06,285 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-04-06 13:55:06,285 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-04-06 13:55:06,286 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-04-06 13:55:06,286 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-04-06 13:55:06,286 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-04-06 13:55:06,286 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-04-06 13:55:06,286 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-04-06 13:55:06,286 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-04-06 13:55:06,287 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-04-06 13:55:06,287 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-04-06 13:55:06,287 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-04-06 13:55:06,287 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-04-06 13:55:06,287 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-04-06 13:55:06,287 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-04-06 13:55:06,288 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-04-06 13:55:06,288 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-04-06 13:55:06,288 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-04-06 13:55:06,288 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-04-06 13:55:06,289 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-04-06 13:55:06,289 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-04-06 13:55:06,289 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-04-06 13:55:06,290 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-04-06 13:55:06,290 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-04-06 13:55:06,293 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles: 2022-04-06 13:55:06,294 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-04-06 13:55:06,332 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:55:06,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-04-06 13:55:06,387 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-04-06 13:55:06,422 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:55:06,446 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:55:06,473 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:55:06,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-04-06 13:55:06,554 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-04-06 13:55:06,587 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-04-06 13:55:06,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:55:06,644 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:55:06,682 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:55:06,707 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:55:06,733 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-04-06 13:55:06,756 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:55:06,782 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-04-06 13:55:06,811 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-04-06 13:55:06,841 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:55:06,865 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:55:06,892 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:55:06,916 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:55:06,973 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-04-06 13:55:07,005 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-04-06 13:55:07,034 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:55:07,065 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-04-06 13:55:07,103 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-04-06 13:55:07,150 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-04-06 13:55:07,179 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-04-06 13:55:07,222 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-04-06 13:55:07,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-04-06 13:55:07,344 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:55:07,368 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:55:07,393 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:55:07,420 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:55:07,442 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-04-06 13:55:07,484 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-04-06 13:55:07,517 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-04-06 13:55:07,540 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-04-06 13:55:07,570 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-04-06 13:55:07,599 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-04-06 13:55:07,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-04-06 13:55:07,654 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-04-06 13:55:07,707 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-04-06 13:55:07,747 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-04-06 13:55:07,771 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-04-06 13:55:07,824 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-04-06 13:55:07,849 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-04-06 13:55:07,873 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-04-06 13:55:07,899 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-04-06 13:55:07,924 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-04-06 13:55:07,957 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-04-06 13:55:07,984 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-04-06 13:55:08,010 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-04-06 13:55:08,034 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-04-06 13:55:08,075 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-04-06 13:55:08,096 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-04-06 13:55:08,123 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-04-06 13:55:08,154 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-04-06 13:55:08,181 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-04-06 13:55:08,206 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-04-06 13:55:08,230 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-04-06 13:55:08,262 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-04-06 13:55:08,492 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-04-06 13:55:08,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-04-06 13:55:08,539 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-04-06 13:55:08,562 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-04-06 13:55:08,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-04-06 13:55:08,606 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-04-06 13:55:08,627 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-04-06 13:55:08,709 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-04-06 13:55:08,736 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-04-06 13:55:08,764 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-04-06 13:55:09,003 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-04-06 13:55:09,050 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-04-06 13:55:09,370 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-04-06 13:55:09,397 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-04-06 13:55:09,420 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-04-06 13:55:09,459 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-04-06 13:55:09,486 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-04-06 13:55:09,521 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-04-06 13:55:09,553 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-04-06 13:55:09,578 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-04-06 13:55:09,609 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-04-06 13:55:09,641 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-04-06 13:55:09,672 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-04-06 13:55:09,703 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-04-06 13:55:09,725 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-04-06 13:55:09,754 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-04-06 13:55:09,777 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-04-06 13:55:09,802 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-04-06 13:55:09,829 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-04-06 13:55:09,853 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-04-06 13:55:11,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles: 2022-04-06 13:55:11,590 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.splash-updater-impl/3.9.1 2022-04-06 13:55:11,600 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.diagnostics-impl/3.9.1 2022-04-06 13:55:11,614 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm/7.2.0 2022-04-06 13:55:11,619 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree/7.2.0 2022-04-06 13:55:11,625 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree.analysis/7.2.0 2022-04-06 13:55:11,632 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.commons/7.2.0 2022-04-06 13:55:11,638 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.api/1.0.1 2022-04-06 13:55:11,643 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.proxy/1.1.6 2022-04-06 13:55:11,660 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:55:11,721 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations 2022-04-06 13:55:11,942 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started 2022-04-06 13:55:11,943 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:55:12,075 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started 2022-04-06 13:55:12,075 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.util/7.2.0 2022-04-06 13:55:12,143 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.blueprint/4.2.8 2022-04-06 13:55:12,200 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.features/4.2.8 2022-04-06 13:55:12,224 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.terminal/3.13.2 2022-04-06 13:55:12,230 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.reader/3.13.2 2022-04-06 13:55:12,235 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.builtins/3.13.2 2022-04-06 13:55:12,241 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.core/4.2.8 2022-04-06 13:55:12,831 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started 2022-04-06 13:55:12,832 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:55:12,909 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:55:12,912 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.features.command/4.2.8 2022-04-06 13:55:12,946 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8 2022-04-06 13:55:12,948 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.instance.core/4.2.8 2022-04-06 13:55:12,992 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-04-06 13:55:12,993 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.config/4.2.8 2022-04-06 13:55:13,008 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:55:13,033 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started 2022-04-06 13:55:13,033 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.table/4.2.8 2022-04-06 13:55:13,040 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.system.core/4.2.8 2022-04-06 13:55:13,064 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8 2022-04-06 13:55:13,065 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:55:13,085 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:55:13,085 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.modules/4.2.8 2022-04-06 13:55:13,105 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:55:13,141 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:55:13,144 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:55:13,146 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:55:13,148 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.service.core/4.2.8 2022-04-06 13:55:13,166 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8 2022-04-06 13:55:13,166 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.blueprintstate/4.2.8 2022-04-06 13:55:13,196 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:55:13,220 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:55:13,221 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.log.core/4.2.8 2022-04-06 13:55:13,250 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:55:13,252 [activator-1-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:55:13,257 [activator-1-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:55:13,272 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.commons.io/2.1.0 2022-04-06 13:55:13,278 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.activation/1.1.1 2022-04-06 13:55:13,286 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-04-06 13:55:13,313 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.xml.stream/1.0.1 2022-04-06 13:55:13,321 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-04-06 13:55:13,341 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.jaxb-impl/2.1.6.1 2022-04-06 13:55:13,351 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - uk.ac.ebi.enfin.mi.cluster/1.6.0 2022-04-06 13:55:13,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.third-party/3.9.1 2022-04-06 13:55:13,366 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-04-06 13:55:13,392 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.xmlbeans/2.4.0.5 2022-04-06 13:55:13,400 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-04-06 13:55:13,424 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - javax.ws.rs-api/2.1.0 2022-04-06 13:55:13,433 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline/3.9.1 2022-04-06 13:55:13,439 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.api-bundle/3.9.1 2022-04-06 13:55:13,451 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.event-impl/3.9.1 2022-04-06 13:55:13,464 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.property.internal/3.9.1 2022-04-06 13:55:13,537 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline-impl/3.9.1 2022-04-06 13:55:13,548 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.util-impl/3.9.1 2022-04-06 13:55:13,568 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io.datasource-impl/3.9.1 2022-04-06 13:55:13,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-impl/3.9.1 2022-04-06 13:55:13,634 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.application-impl/3.9.1 2022-04-06 13:55:13,651 [features-3-thread-1] INFO org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration 2022-04-06 13:55:13,653 [features-3-thread-1] INFO org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration 2022-04-06 13:55:13,668 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-util-impl/3.9.1 2022-04-06 13:55:13,725 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.model-impl/3.9.1 2022-04-06 13:55:14,125 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.presentation-impl/3.9.1 2022-04-06 13:55:14,142 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-swing-impl/3.9.1 2022-04-06 13:55:14,198 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-impl/3.9.1 2022-04-06 13:55:14,229 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.view.vizmap-impl/3.9.1 2022-04-06 13:55:14,400 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.viewmodel-impl/3.9.1 2022-04-06 13:55:14,457 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-impl/3.9.1 2022-04-06 13:55:14,476 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.group-impl/3.9.1 2022-04-06 13:55:14,642 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-core-impl/3.9.1 2022-04-06 13:55:14,651 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.session-impl/3.9.1 2022-04-06 13:55:14,668 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.custom-graphics-internal/3.9.1 2022-04-06 13:55:14,840 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-presentation-impl/3.9.1 2022-04-06 13:55:14,920 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.ding-presentation-impl/3.9.1 2022-04-06 13:55:15,066 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io-impl/3.9.1 2022-04-06 13:55:15,168 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.core-task-impl/3.9.1 2022-04-06 13:55:15,348 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.command-executor-impl/3.9.1 2022-04-06 13:55:15,416 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-application-impl/3.9.1 2022-04-06 13:55:16,755 [features-3-thread-1] WARN org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist. 2022-04-06 13:55:17,011 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.jobs-impl/3.9.1 2022-04-06 13:55:17,082 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.linkout-impl/3.9.1 2022-04-06 13:55:17,113 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-cytoscape-impl/3.9.1 2022-04-06 13:55:17,148 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - edge-bundler/3.9.1 2022-04-06 13:55:17,170 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.manual-layout-impl/3.9.1 2022-04-06 13:55:17,348 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-prefuse-impl/3.9.1 2022-04-06 13:55:17,370 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.filter2-impl/3.9.1 2022-04-06 13:55:17,692 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.editor-impl/3.9.1 2022-04-06 13:55:17,723 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-import-impl/3.9.1 2022-04-06 13:55:18,221 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-browser-impl/3.9.1 2022-04-06 13:55:18,535 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.webservice-impl/3.9.1 2022-04-06 13:55:18,635 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-impl/3.9.1 2022-04-06 13:55:19,028 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2 2022-04-06 13:55:19,030 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43 2022-04-06 13:55:19,314 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.graphml-impl/3.9.1 2022-04-06 13:55:19,324 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.search-impl/3.9.1 2022-04-06 13:55:19,355 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.app-impl/3.9.1 2022-04-06 13:55:19,467 [pool-10-thread-1] INFO org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607 2022-04-06 13:55:19,482 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.scripting-impl/3.9.1 2022-04-06 13:55:19,509 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1] 2022-04-06 13:55:19,511 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.gui-cmdline-parser-impl/3.9.1 2022-04-06 13:55:19,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-functions-impl/3.9.1 2022-04-06 13:55:19,546 [features-3-thread-1] INFO org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener 2022-04-06 13:55:20,599 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client 2022-04-06 13:55:20,775 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done. 2022-04-06 13:55:20,949 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:55:20,951 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:55:20,952 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-04-06 13:55:21,789 [pool-9-thread-1] INFO org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice 2022-04-06 13:55:21,847 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: BioMart Client 2022-04-06 13:55:22,564 [Thread-16] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'. 2022-04-06 13:55:22,790 [Task-Thread-1-Factory-0x27eb893f] INFO org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted. Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@7bf4c3fb 2022-04-06 13:55:22,791 [Task-Thread-1-Factory-0x27eb893f] INFO org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@7bf4c3fb 2022-04-06 13:55:22,806 [Task-Thread-3-Factory-0x27eb893f] INFO org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3 2022-04-06 13:55:22,812 [Task-Thread-3-Factory-0x27eb893f] INFO org.cytoscape.application.userlog - Image loading process finished in 0.01 sec. 2022-04-06 13:55:22,813 [Task-Thread-3-Factory-0x27eb893f] INFO org.cytoscape.application.userlog - Currently, -1 images are available. 2022-04-06 13:55:23,431 [Task-Thread-3-Factory-0x27eb893f] INFO org.cytoscape.application.userlog - Image saving process finished in 0.633 sec. 2022-04-06 13:55:24,975 [pool-9-thread-1] INFO org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209 2022-04-06 13:55:25,220 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server... 2022-04-06 13:55:26,920 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Examining bundle for SPI provider: org.eclipse.jetty.http 2022-04-06 13:55:26,924 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Found SPI resource: bundle://138.0:0/META-INF/services/org.eclipse.jetty.http.HttpFieldPreEncoder 2022-04-06 13:55:26,964 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Loaded SPI provider: class org.eclipse.jetty.http.Http1FieldPreEncoder 2022-04-06 13:55:26,967 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered service: org.apache.felix.framework.ServiceRegistrationImpl@3800b6a2 2022-04-06 13:55:26,967 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered provider: org.eclipse.jetty.http.HttpFieldPreEncoder in bundle org.eclipse.jetty.http 2022-04-06 13:55:27,941 [pool-84-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.http.core/4.2.8. Missing service: [org.apache.karaf.http.core.ProxyService, org.apache.karaf.http.core.ServletService] 2022-04-06 13:55:28,329 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:55:28,336 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:55:28,377 [activator-1-thread-3] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:55:28,724 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3 2022-04-06 13:55:28,727 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - ========== Image saving process finished ============= 2022-04-06 13:55:28,750 [Task-Thread-3-Factory-0x27eb893f] INFO org.cytoscape.application.userlog - Image saving process finished in 0.017 sec. 2022-04-06 13:55:28,826 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - #CiaoBello 2022-04-06 13:55:28,849 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8 2022-04-06 13:55:28,864 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1 2022-04-06 13:55:28,869 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 2022-04-06 13:55:28,878 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1 2022-04-06 13:55:28,890 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2 2022-04-06 13:55:28,950 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-04-06 13:55:28,966 [pool-84-thread-1] ERROR org.cytoscape.rest.internal.CyActivator - Failed to initialize cyREST server. org.osgi.framework.BundleException: The framework has been shutdown. at org.apache.felix.framework.Felix.installBundle(Felix.java:2995) ~[?:?] at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:167) ~[?:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installBundleFromResource(OSGiJAXRSManager.java:266) ~[!/:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installBundlesFromResources(OSGiJAXRSManager.java:238) ~[!/:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installOSGiJAXRSBundles(OSGiJAXRSManager.java:130) ~[!/:?] at org.cytoscape.rest.internal.CyActivator.lambda$startCyREST$0(CyActivator.java:325) [!/:?] at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) [?:?] at java.util.concurrent.FutureTask.run(FutureTask.java:264) [?:?] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) [?:?] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) [?:?] at java.lang.Thread.run(Thread.java:829) [?:?] 2022-04-06 13:55:29,009 [FelixStartLevel] INFO org.apache.aries.spifly.BaseActivator - Unregistered: org.apache.felix.framework.ServiceRegistrationImpl@3800b6a2 2022-04-06 13:55:29,099 [FelixStartLevel] INFO org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2... 2022-04-06 13:55:29,126 [FelixStartLevel] INFO org.cytoscape.rest.internal.CyActivator - Shutting down REST server... 2022-04-06 13:55:29,795 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8 2022-04-06 13:55:29,815 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-04-06 13:55:29,823 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-04-06 13:55:29,824 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-04-06 13:55:29,825 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-04-06 13:55:29,826 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-04-06 13:55:29,827 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-04-06 13:55:29,829 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8 2022-04-06 13:55:29,830 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8