2022-06-23 09:26:55,708 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.kar.cfg 2022-06-23 09:26:55,770 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from jmx.acl.cfg 2022-06-23 09:26:55,814 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.config.cfg 2022-06-23 09:26:55,855 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg 2022-06-23 09:26:55,891 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg 2022-06-23 09:26:55,933 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg 2022-06-23 09:26:55,983 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg 2022-06-23 09:26:56,030 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg 2022-06-23 09:26:56,076 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg 2022-06-23 09:26:57,689 [activator-1-thread-2] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1] 2022-06-23 09:26:58,583 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform: 2022-06-23 09:26:58,583 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Region: root 2022-06-23 09:26:58,584 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Bundles to install: 2022-06-23 09:26:58,584 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-06-23 09:26:58,584 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:26:58,584 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-06-23 09:26:58,584 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-06-23 09:26:58,584 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:26:58,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:26:58,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:26:58,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-06-23 09:26:58,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-06-23 09:26:58,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-06-23 09:26:58,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:26:58,586 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:26:58,586 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:26:58,586 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:26:58,586 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-06-23 09:26:58,586 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:26:58,587 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-06-23 09:26:58,587 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-06-23 09:26:58,587 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:26:58,587 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:26:58,587 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:26:58,587 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:26:58,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-06-23 09:26:58,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-06-23 09:26:58,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:26:58,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-06-23 09:26:58,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-06-23 09:26:58,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-06-23 09:26:58,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-06-23 09:26:58,589 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-06-23 09:26:58,589 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-06-23 09:26:58,589 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:26:58,589 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:26:58,589 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:26:58,589 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:26:58,590 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-06-23 09:26:58,590 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-06-23 09:26:58,590 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-06-23 09:26:58,590 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-06-23 09:26:58,590 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-06-23 09:26:58,590 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-06-23 09:26:58,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-06-23 09:26:58,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-06-23 09:26:58,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-06-23 09:26:58,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-06-23 09:26:58,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-06-23 09:26:58,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-06-23 09:26:58,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-06-23 09:26:58,592 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-06-23 09:26:58,592 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-06-23 09:26:58,592 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-06-23 09:26:58,592 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-06-23 09:26:58,592 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-06-23 09:26:58,592 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-06-23 09:26:58,593 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-06-23 09:26:58,593 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-06-23 09:26:58,593 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-06-23 09:26:58,593 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-06-23 09:26:58,593 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-06-23 09:26:58,593 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-06-23 09:26:58,594 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-06-23 09:26:58,595 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-06-23 09:26:58,595 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-06-23 09:26:58,595 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-06-23 09:26:58,596 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-06-23 09:26:58,596 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-06-23 09:26:58,596 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-06-23 09:26:58,596 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-06-23 09:26:58,597 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-06-23 09:26:58,597 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-06-23 09:26:58,597 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-06-23 09:26:58,597 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-06-23 09:26:58,597 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-06-23 09:26:58,597 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-06-23 09:26:58,598 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-06-23 09:26:58,599 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-06-23 09:26:58,599 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-06-23 09:26:58,599 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-06-23 09:26:58,599 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-06-23 09:26:58,602 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles: 2022-06-23 09:26:58,603 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-06-23 09:26:58,642 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:26:58,675 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-06-23 09:26:58,707 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-06-23 09:26:58,738 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:26:58,767 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:26:58,805 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:26:58,851 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-06-23 09:26:58,883 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-06-23 09:26:58,926 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-06-23 09:26:58,965 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:26:59,014 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:26:59,052 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:26:59,097 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:26:59,134 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-06-23 09:26:59,165 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:26:59,195 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-06-23 09:26:59,233 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-06-23 09:26:59,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:26:59,305 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:26:59,345 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:26:59,373 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:26:59,436 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-06-23 09:26:59,470 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-06-23 09:26:59,498 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:26:59,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-06-23 09:26:59,572 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-06-23 09:26:59,620 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-06-23 09:26:59,649 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-06-23 09:26:59,686 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-06-23 09:26:59,737 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-06-23 09:26:59,823 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:26:59,854 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:26:59,883 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:26:59,917 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:26:59,947 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-06-23 09:27:00,000 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-06-23 09:27:00,040 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-06-23 09:27:00,075 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-06-23 09:27:00,101 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-06-23 09:27:00,128 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-06-23 09:27:00,152 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-06-23 09:27:00,180 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-06-23 09:27:00,249 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-06-23 09:27:00,301 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-06-23 09:27:00,331 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-06-23 09:27:00,384 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-06-23 09:27:00,415 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-06-23 09:27:00,444 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-06-23 09:27:00,478 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-06-23 09:27:00,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-06-23 09:27:00,553 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-06-23 09:27:00,586 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-06-23 09:27:00,628 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-06-23 09:27:00,663 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-06-23 09:27:00,707 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-06-23 09:27:00,741 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-06-23 09:27:00,771 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-06-23 09:27:00,810 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-06-23 09:27:00,838 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-06-23 09:27:00,878 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-06-23 09:27:00,912 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-06-23 09:27:00,940 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-06-23 09:27:01,268 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-06-23 09:27:01,293 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-06-23 09:27:01,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-06-23 09:27:01,347 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-06-23 09:27:01,379 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-06-23 09:27:01,413 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-06-23 09:27:01,443 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-06-23 09:27:01,557 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-06-23 09:27:01,597 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-06-23 09:27:01,637 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-06-23 09:27:01,977 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-06-23 09:27:02,042 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-06-23 09:27:02,456 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-06-23 09:27:02,495 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-06-23 09:27:02,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-06-23 09:27:02,580 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-06-23 09:27:02,605 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-06-23 09:27:02,650 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-06-23 09:27:02,681 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-06-23 09:27:02,720 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-06-23 09:27:02,750 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-06-23 09:27:02,786 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-06-23 09:27:02,821 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-06-23 09:27:02,860 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-06-23 09:27:02,893 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-06-23 09:27:02,938 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-06-23 09:27:02,968 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-06-23 09:27:03,003 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-06-23 09:27:03,034 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-06-23 09:27:03,070 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-06-23 09:27:04,636 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles: 2022-06-23 09:27:04,639 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.diagnostics-impl/3.9.1 2022-06-23 09:27:04,652 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.splash-updater-impl/3.9.1 2022-06-23 09:27:04,668 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm/7.2.0 2022-06-23 09:27:04,674 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree/7.2.0 2022-06-23 09:27:04,681 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree.analysis/7.2.0 2022-06-23 09:27:04,686 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.commons/7.2.0 2022-06-23 09:27:04,691 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.proxy/1.1.6 2022-06-23 09:27:04,707 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.util/7.2.0 2022-06-23 09:27:04,713 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:27:04,720 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:27:04,774 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations 2022-06-23 09:27:04,977 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started 2022-06-23 09:27:04,978 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:27:05,006 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started 2022-06-23 09:27:05,007 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:27:05,023 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:27:05,044 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:27:05,062 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.terminal/3.13.2 2022-06-23 09:27:05,069 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.reader/3.13.2 2022-06-23 09:27:05,074 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.builtins/3.13.2 2022-06-23 09:27:05,080 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.core/4.2.8 2022-06-23 09:27:05,553 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started 2022-06-23 09:27:05,553 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:27:05,623 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:27:05,627 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:27:05,660 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.features.command/4.2.8 2022-06-23 09:27:05,690 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8 2022-06-23 09:27:05,692 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:27:05,718 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:27:05,719 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:27:05,740 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:27:05,769 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:27:05,771 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:27:05,793 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:27:05,795 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:27:05,815 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started 2022-06-23 09:27:05,816 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.service.core/4.2.8 2022-06-23 09:27:05,835 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8 2022-06-23 09:27:05,835 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:27:05,855 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:27:05,855 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.system.core/4.2.8 2022-06-23 09:27:05,877 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8 2022-06-23 09:27:05,877 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.log.core/4.2.8 2022-06-23 09:27:05,909 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.log.core/4.2.8. Missing service: [org.apache.karaf.log.core.LogEventFormatter] 2022-06-23 09:27:05,910 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.instance.core/4.2.8 2022-06-23 09:27:05,911 [activator-1-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:27:05,944 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-06-23 09:27:05,945 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.table/4.2.8 2022-06-23 09:27:05,969 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.activation/1.1.1 2022-06-23 09:27:05,977 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:27:05,984 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:27:06,005 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:27:06,026 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.jaxb-impl/2.1.6.1 2022-06-23 09:27:06,032 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.third-party/3.9.1 2022-06-23 09:27:06,039 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - uk.ac.ebi.enfin.mi.cluster/1.6.0 2022-06-23 09:27:06,045 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.xmlbeans/2.4.0.5 2022-06-23 09:27:06,050 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:27:06,068 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:27:06,093 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.commons.io/2.1.0 2022-06-23 09:27:06,100 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - javax.ws.rs-api/2.1.0 2022-06-23 09:27:06,109 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline/3.9.1 2022-06-23 09:27:06,115 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.api-bundle/3.9.1 2022-06-23 09:27:06,126 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline-impl/3.9.1 2022-06-23 09:27:06,135 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.property.internal/3.9.1 2022-06-23 09:27:06,198 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.event-impl/3.9.1 2022-06-23 09:27:06,212 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.util-impl/3.9.1 2022-06-23 09:27:06,232 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-impl/3.9.1 2022-06-23 09:27:06,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io.datasource-impl/3.9.1 2022-06-23 09:27:06,294 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.application-impl/3.9.1 2022-06-23 09:27:06,307 [features-3-thread-1] INFO org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration 2022-06-23 09:27:06,308 [features-3-thread-1] INFO org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration 2022-06-23 09:27:06,324 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-util-impl/3.9.1 2022-06-23 09:27:06,380 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.model-impl/3.9.1 2022-06-23 09:27:06,764 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-swing-impl/3.9.1 2022-06-23 09:27:06,813 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-impl/3.9.1 2022-06-23 09:27:06,832 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.presentation-impl/3.9.1 2022-06-23 09:27:06,849 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.viewmodel-impl/3.9.1 2022-06-23 09:27:06,907 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.view.vizmap-impl/3.9.1 2022-06-23 09:27:06,973 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-impl/3.9.1 2022-06-23 09:27:06,986 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.group-impl/3.9.1 2022-06-23 09:27:07,150 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.session-impl/3.9.1 2022-06-23 09:27:07,165 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-core-impl/3.9.1 2022-06-23 09:27:07,174 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.custom-graphics-internal/3.9.1 2022-06-23 09:27:07,336 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-presentation-impl/3.9.1 2022-06-23 09:27:07,607 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.ding-presentation-impl/3.9.1 2022-06-23 09:27:07,831 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io-impl/3.9.1 2022-06-23 09:27:07,935 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.core-task-impl/3.9.1 2022-06-23 09:27:08,102 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.command-executor-impl/3.9.1 2022-06-23 09:27:08,170 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-application-impl/3.9.1 2022-06-23 09:27:09,503 [features-3-thread-1] WARN org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist. 2022-06-23 09:27:09,747 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.jobs-impl/3.9.1 2022-06-23 09:27:09,817 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.manual-layout-impl/3.9.1 2022-06-23 09:27:09,974 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.graphml-impl/3.9.1 2022-06-23 09:27:09,989 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-impl/3.9.1 2022-06-23 09:27:10,395 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2 2022-06-23 09:27:10,396 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43 2022-06-23 09:27:10,684 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-prefuse-impl/3.9.1 2022-06-23 09:27:10,703 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-cytoscape-impl/3.9.1 2022-06-23 09:27:10,738 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.filter2-impl/3.9.1 2022-06-23 09:27:10,954 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-browser-impl/3.9.1 2022-06-23 09:27:11,163 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.search-impl/3.9.1 2022-06-23 09:27:11,215 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.editor-impl/3.9.1 2022-06-23 09:27:11,241 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.linkout-impl/3.9.1 2022-06-23 09:27:11,270 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.webservice-impl/3.9.1 2022-06-23 09:27:11,347 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - edge-bundler/3.9.1 2022-06-23 09:27:11,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-import-impl/3.9.1 2022-06-23 09:27:11,839 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.app-impl/3.9.1 2022-06-23 09:27:11,962 [pool-10-thread-1] INFO org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607 2022-06-23 09:27:11,976 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.scripting-impl/3.9.1 2022-06-23 09:27:12,001 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1] 2022-06-23 09:27:12,002 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.gui-cmdline-parser-impl/3.9.1 2022-06-23 09:27:12,023 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-functions-impl/3.9.1 2022-06-23 09:27:12,041 [features-3-thread-1] INFO org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener 2022-06-23 09:27:13,498 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client 2022-06-23 09:27:13,534 [pool-9-thread-1] INFO org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice 2022-06-23 09:27:13,593 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: BioMart Client 2022-06-23 09:27:13,606 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done. 2022-06-23 09:27:14,184 [Thread-16] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'. 2022-06-23 09:27:14,491 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:27:14,492 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:27:14,493 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:27:15,173 [Task-Thread-1-Factory-0x6b2a5eca] INFO org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted. Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@11e6de9 2022-06-23 09:27:15,174 [Task-Thread-1-Factory-0x6b2a5eca] INFO org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@11e6de9 2022-06-23 09:27:15,188 [Task-Thread-3-Factory-0x6b2a5eca] INFO org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3 2022-06-23 09:27:15,192 [Task-Thread-3-Factory-0x6b2a5eca] INFO org.cytoscape.application.userlog - Image loading process finished in 0.009 sec. 2022-06-23 09:27:15,193 [Task-Thread-3-Factory-0x6b2a5eca] INFO org.cytoscape.application.userlog - Currently, -1 images are available. 2022-06-23 09:27:16,018 [Task-Thread-3-Factory-0x6b2a5eca] INFO org.cytoscape.application.userlog - Image saving process finished in 0.84 sec. 2022-06-23 09:27:17,294 [pool-9-thread-1] INFO org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209 2022-06-23 09:27:18,098 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server... 2022-06-23 09:27:20,065 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Examining bundle for SPI provider: org.eclipse.jetty.http 2022-06-23 09:27:20,069 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Found SPI resource: bundle://138.0:0/META-INF/services/org.eclipse.jetty.http.HttpFieldPreEncoder 2022-06-23 09:27:20,106 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Loaded SPI provider: class org.eclipse.jetty.http.Http1FieldPreEncoder 2022-06-23 09:27:20,108 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered service: org.apache.felix.framework.ServiceRegistrationImpl@30ce643e 2022-06-23 09:27:20,108 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered provider: org.eclipse.jetty.http.HttpFieldPreEncoder in bundle org.eclipse.jetty.http 2022-06-23 09:27:21,099 [pool-84-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.http.core/4.2.8. Missing service: [org.apache.karaf.http.core.ProxyService, org.apache.karaf.http.core.ServletService] 2022-06-23 09:27:21,443 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:27:21,450 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:27:21,479 [activator-1-thread-3] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:27:23,930 [pool-84-thread-1] INFO org.cytoscape.rest.internal.task.ResourceManager - ========== Cytoscape RESTful API registered core resources in (908) milliseconds. 2022-06-23 09:27:23,931 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - cyREST API Server initialized in 5832msec 2022-06-23 09:27:25,838 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3 2022-06-23 09:27:25,841 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - ========== Image saving process finished ============= 2022-06-23 09:27:25,853 [Task-Thread-3-Factory-0x6b2a5eca] INFO org.cytoscape.application.userlog - Image saving process finished in 0.009 sec. 2022-06-23 09:27:25,955 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - #CiaoBello 2022-06-23 09:27:25,973 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8 2022-06-23 09:27:25,988 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1 2022-06-23 09:27:25,994 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:27:26,004 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:27:26,015 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:27:26,159 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:27:26,271 [FelixStartLevel] INFO org.apache.aries.spifly.BaseActivator - Unregistered: org.apache.felix.framework.ServiceRegistrationImpl@30ce643e 2022-06-23 09:27:26,350 [FelixStartLevel] INFO org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2... 2022-06-23 09:27:26,394 [FelixStartLevel] INFO org.cytoscape.rest.internal.CyActivator - Shutting down REST server... 2022-06-23 09:27:27,471 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8 2022-06-23 09:27:27,488 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:27:27,491 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8 2022-06-23 09:27:27,492 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8 2022-06-23 09:27:27,494 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:27:27,495 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:27:27,496 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:27:27,497 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:27:27,499 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-06-23 09:49:47,870 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.kar.cfg 2022-06-23 09:49:47,921 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from jmx.acl.cfg 2022-06-23 09:49:47,957 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.config.cfg 2022-06-23 09:49:48,008 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg 2022-06-23 09:49:48,043 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg 2022-06-23 09:49:48,080 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg 2022-06-23 09:49:48,118 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg 2022-06-23 09:49:48,154 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg 2022-06-23 09:49:48,191 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg 2022-06-23 09:49:49,567 [activator-1-thread-2] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1] 2022-06-23 09:49:50,315 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform: 2022-06-23 09:49:50,316 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Region: root 2022-06-23 09:49:50,316 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Bundles to install: 2022-06-23 09:49:50,316 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-06-23 09:49:50,316 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:49:50,316 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-06-23 09:49:50,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-06-23 09:49:50,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:49:50,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:49:50,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:49:50,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-06-23 09:49:50,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-06-23 09:49:50,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-06-23 09:49:50,318 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:49:50,318 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:49:50,318 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:49:50,318 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:49:50,318 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-06-23 09:49:50,318 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:49:50,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-06-23 09:49:50,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-06-23 09:49:50,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:49:50,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:49:50,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:49:50,320 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:49:50,320 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-06-23 09:49:50,320 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-06-23 09:49:50,320 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:49:50,320 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-06-23 09:49:50,320 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-06-23 09:49:50,321 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-06-23 09:49:50,321 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-06-23 09:49:50,321 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-06-23 09:49:50,321 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-06-23 09:49:50,321 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:49:50,322 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:49:50,322 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:49:50,322 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:49:50,322 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-06-23 09:49:50,322 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-06-23 09:49:50,322 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-06-23 09:49:50,322 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-06-23 09:49:50,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-06-23 09:49:50,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-06-23 09:49:50,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-06-23 09:49:50,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-06-23 09:49:50,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-06-23 09:49:50,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-06-23 09:49:50,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-06-23 09:49:50,324 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-06-23 09:49:50,324 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-06-23 09:49:50,324 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-06-23 09:49:50,324 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-06-23 09:49:50,324 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-06-23 09:49:50,325 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-06-23 09:49:50,325 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-06-23 09:49:50,325 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-06-23 09:49:50,325 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-06-23 09:49:50,325 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-06-23 09:49:50,325 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-06-23 09:49:50,326 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-06-23 09:49:50,326 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-06-23 09:49:50,327 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-06-23 09:49:50,327 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-06-23 09:49:50,327 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-06-23 09:49:50,327 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-06-23 09:49:50,327 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-06-23 09:49:50,327 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-06-23 09:49:50,328 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-06-23 09:49:50,328 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-06-23 09:49:50,328 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-06-23 09:49:50,328 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-06-23 09:49:50,328 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-06-23 09:49:50,328 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-06-23 09:49:50,329 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-06-23 09:49:50,329 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-06-23 09:49:50,329 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-06-23 09:49:50,329 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-06-23 09:49:50,329 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-06-23 09:49:50,329 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-06-23 09:49:50,330 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-06-23 09:49:50,330 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-06-23 09:49:50,330 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-06-23 09:49:50,330 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-06-23 09:49:50,330 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-06-23 09:49:50,330 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-06-23 09:49:50,331 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-06-23 09:49:50,331 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-06-23 09:49:50,331 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-06-23 09:49:50,331 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-06-23 09:49:50,331 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-06-23 09:49:50,331 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-06-23 09:49:50,332 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-06-23 09:49:50,332 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-06-23 09:49:50,332 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-06-23 09:49:50,332 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-06-23 09:49:50,335 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles: 2022-06-23 09:49:50,336 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-06-23 09:49:50,371 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:49:50,401 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-06-23 09:49:50,433 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-06-23 09:49:50,471 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:49:50,505 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:49:50,538 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:49:50,584 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-06-23 09:49:50,612 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-06-23 09:49:50,650 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-06-23 09:49:50,684 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:49:50,716 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:49:50,748 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:49:50,776 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:49:50,801 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-06-23 09:49:50,828 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:49:50,862 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-06-23 09:49:50,890 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-06-23 09:49:50,923 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:49:50,951 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:49:50,977 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:49:51,002 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:49:51,048 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-06-23 09:49:51,078 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-06-23 09:49:51,107 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:49:51,137 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-06-23 09:49:51,173 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-06-23 09:49:51,210 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-06-23 09:49:51,241 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-06-23 09:49:51,271 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-06-23 09:49:51,317 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-06-23 09:49:51,383 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:49:51,412 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:49:51,441 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:49:51,468 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:49:51,497 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-06-23 09:49:51,539 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-06-23 09:49:51,579 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-06-23 09:49:51,608 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-06-23 09:49:51,631 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-06-23 09:49:51,657 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-06-23 09:49:51,689 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-06-23 09:49:51,716 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-06-23 09:49:51,769 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-06-23 09:49:51,812 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-06-23 09:49:51,839 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-06-23 09:49:51,896 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-06-23 09:49:51,930 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-06-23 09:49:51,958 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-06-23 09:49:51,987 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-06-23 09:49:52,014 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-06-23 09:49:52,050 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-06-23 09:49:52,094 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-06-23 09:49:52,142 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-06-23 09:49:52,170 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-06-23 09:49:52,209 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-06-23 09:49:52,239 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-06-23 09:49:52,265 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-06-23 09:49:52,301 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-06-23 09:49:52,334 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-06-23 09:49:52,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-06-23 09:49:52,391 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-06-23 09:49:52,427 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-06-23 09:49:52,661 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-06-23 09:49:52,689 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-06-23 09:49:52,717 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-06-23 09:49:52,748 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-06-23 09:49:52,781 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-06-23 09:49:52,805 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-06-23 09:49:52,830 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-06-23 09:49:52,911 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-06-23 09:49:52,943 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-06-23 09:49:52,976 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-06-23 09:49:53,222 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-06-23 09:49:53,269 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-06-23 09:49:53,573 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-06-23 09:49:53,606 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-06-23 09:49:53,638 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-06-23 09:49:53,684 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-06-23 09:49:53,710 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-06-23 09:49:53,746 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-06-23 09:49:53,775 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-06-23 09:49:53,805 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-06-23 09:49:53,835 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-06-23 09:49:53,868 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-06-23 09:49:53,901 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-06-23 09:49:53,928 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-06-23 09:49:53,958 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-06-23 09:49:54,009 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-06-23 09:49:54,038 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-06-23 09:49:54,064 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-06-23 09:49:54,092 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-06-23 09:49:54,126 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-06-23 09:49:55,577 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles: 2022-06-23 09:49:55,581 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.splash-updater-impl/3.9.1 2022-06-23 09:49:55,591 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.diagnostics-impl/3.9.1 2022-06-23 09:49:55,605 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:49:55,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm/7.2.0 2022-06-23 09:49:55,619 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree/7.2.0 2022-06-23 09:49:55,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.commons/7.2.0 2022-06-23 09:49:55,628 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.proxy/1.1.6 2022-06-23 09:49:55,644 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:49:55,698 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations 2022-06-23 09:49:55,889 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started 2022-06-23 09:49:55,890 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:49:55,915 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started 2022-06-23 09:49:55,916 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree.analysis/7.2.0 2022-06-23 09:49:55,921 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.util/7.2.0 2022-06-23 09:49:55,927 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:49:55,941 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:49:55,960 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.terminal/3.13.2 2022-06-23 09:49:55,966 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.reader/3.13.2 2022-06-23 09:49:55,971 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.builtins/3.13.2 2022-06-23 09:49:55,977 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.core/4.2.8 2022-06-23 09:49:56,455 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started 2022-06-23 09:49:56,456 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:49:56,499 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:49:56,501 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:49:56,549 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.service.core/4.2.8 2022-06-23 09:49:56,571 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8 2022-06-23 09:49:56,572 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.system.core/4.2.8 2022-06-23 09:49:56,600 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8 2022-06-23 09:49:56,600 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:49:56,652 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:49:56,665 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.table/4.2.8 2022-06-23 09:49:56,671 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.log.core/4.2.8 2022-06-23 09:49:56,705 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:49:56,705 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:49:56,705 [activator-1-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:49:56,709 [activator-1-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:49:56,721 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:49:56,721 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:49:56,739 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:49:56,763 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:49:56,783 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started 2022-06-23 09:49:56,784 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.features.command/4.2.8 2022-06-23 09:49:56,808 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8 2022-06-23 09:49:56,810 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:49:56,833 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:49:56,835 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:49:56,838 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:49:56,839 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.instance.core/4.2.8 2022-06-23 09:49:56,876 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-06-23 09:49:56,893 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:49:56,914 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:49:56,920 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.xmlbeans/2.4.0.5 2022-06-23 09:49:56,927 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.activation/1.1.1 2022-06-23 09:49:56,932 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:49:56,951 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:49:56,971 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:49:56,991 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.jaxb-impl/2.1.6.1 2022-06-23 09:49:56,997 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.third-party/3.9.1 2022-06-23 09:49:57,008 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - uk.ac.ebi.enfin.mi.cluster/1.6.0 2022-06-23 09:49:57,016 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.commons.io/2.1.0 2022-06-23 09:49:57,024 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - javax.ws.rs-api/2.1.0 2022-06-23 09:49:57,033 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline/3.9.1 2022-06-23 09:49:57,037 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.api-bundle/3.9.1 2022-06-23 09:49:57,048 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline-impl/3.9.1 2022-06-23 09:49:57,057 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.property.internal/3.9.1 2022-06-23 09:49:57,109 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.event-impl/3.9.1 2022-06-23 09:49:57,120 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.util-impl/3.9.1 2022-06-23 09:49:57,139 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-impl/3.9.1 2022-06-23 09:49:57,183 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io.datasource-impl/3.9.1 2022-06-23 09:49:57,202 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.application-impl/3.9.1 2022-06-23 09:49:57,216 [features-3-thread-1] INFO org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration 2022-06-23 09:49:57,218 [features-3-thread-1] INFO org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration 2022-06-23 09:49:57,234 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-util-impl/3.9.1 2022-06-23 09:49:57,292 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-impl/3.9.1 2022-06-23 09:49:57,318 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.presentation-impl/3.9.1 2022-06-23 09:49:57,332 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-swing-impl/3.9.1 2022-06-23 09:49:57,403 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.model-impl/3.9.1 2022-06-23 09:49:57,831 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.view.vizmap-impl/3.9.1 2022-06-23 09:49:57,974 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.viewmodel-impl/3.9.1 2022-06-23 09:49:58,023 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-impl/3.9.1 2022-06-23 09:49:58,037 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.group-impl/3.9.1 2022-06-23 09:49:58,202 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.session-impl/3.9.1 2022-06-23 09:49:58,217 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-core-impl/3.9.1 2022-06-23 09:49:58,225 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.custom-graphics-internal/3.9.1 2022-06-23 09:49:58,448 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.ding-presentation-impl/3.9.1 2022-06-23 09:49:58,618 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-presentation-impl/3.9.1 2022-06-23 09:49:58,686 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io-impl/3.9.1 2022-06-23 09:49:58,774 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.core-task-impl/3.9.1 2022-06-23 09:49:58,933 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.command-executor-impl/3.9.1 2022-06-23 09:49:58,996 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-application-impl/3.9.1 2022-06-23 09:50:00,366 [features-3-thread-1] WARN org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist. 2022-06-23 09:50:00,611 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.jobs-impl/3.9.1 2022-06-23 09:50:00,682 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - edge-bundler/3.9.1 2022-06-23 09:50:00,704 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-import-impl/3.9.1 2022-06-23 09:50:01,201 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.graphml-impl/3.9.1 2022-06-23 09:50:01,215 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.editor-impl/3.9.1 2022-06-23 09:50:01,245 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.search-impl/3.9.1 2022-06-23 09:50:01,277 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.manual-layout-impl/3.9.1 2022-06-23 09:50:01,446 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-prefuse-impl/3.9.1 2022-06-23 09:50:01,463 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-impl/3.9.1 2022-06-23 09:50:01,862 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2 2022-06-23 09:50:01,864 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43 2022-06-23 09:50:02,141 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.linkout-impl/3.9.1 2022-06-23 09:50:02,180 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.webservice-impl/3.9.1 2022-06-23 09:50:02,281 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.filter2-impl/3.9.1 2022-06-23 09:50:02,469 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-cytoscape-impl/3.9.1 2022-06-23 09:50:02,501 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-browser-impl/3.9.1 2022-06-23 09:50:02,691 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.app-impl/3.9.1 2022-06-23 09:50:02,803 [pool-10-thread-1] INFO org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607 2022-06-23 09:50:02,822 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.scripting-impl/3.9.1 2022-06-23 09:50:02,852 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1] 2022-06-23 09:50:02,853 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.gui-cmdline-parser-impl/3.9.1 2022-06-23 09:50:02,876 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-functions-impl/3.9.1 2022-06-23 09:50:02,898 [features-3-thread-1] INFO org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener 2022-06-23 09:50:03,788 [pool-9-thread-1] INFO org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice 2022-06-23 09:50:03,840 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: BioMart Client 2022-06-23 09:50:04,470 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done. 2022-06-23 09:50:04,848 [Thread-16] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'. 2022-06-23 09:50:05,142 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:50:05,144 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:50:05,145 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:50:05,644 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client 2022-06-23 09:50:05,974 [Task-Thread-1-Factory-0x20eb5050] INFO org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted. Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@787ec3e6 2022-06-23 09:50:05,975 [Task-Thread-1-Factory-0x20eb5050] INFO org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@787ec3e6 2022-06-23 09:50:05,984 [Task-Thread-3-Factory-0x20eb5050] INFO org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3 2022-06-23 09:50:05,990 [Task-Thread-3-Factory-0x20eb5050] INFO org.cytoscape.application.userlog - Image loading process finished in 0.008 sec. 2022-06-23 09:50:05,990 [Task-Thread-3-Factory-0x20eb5050] INFO org.cytoscape.application.userlog - Currently, -1 images are available. 2022-06-23 09:50:06,678 [Task-Thread-3-Factory-0x20eb5050] INFO org.cytoscape.application.userlog - Image saving process finished in 0.697 sec. 2022-06-23 09:50:07,377 [pool-9-thread-1] INFO org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209 2022-06-23 09:50:08,684 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server... 2022-06-23 09:50:10,374 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Examining bundle for SPI provider: org.eclipse.jetty.http 2022-06-23 09:50:10,378 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Found SPI resource: bundle://138.0:0/META-INF/services/org.eclipse.jetty.http.HttpFieldPreEncoder 2022-06-23 09:50:10,414 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Loaded SPI provider: class org.eclipse.jetty.http.Http1FieldPreEncoder 2022-06-23 09:50:10,417 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered service: org.apache.felix.framework.ServiceRegistrationImpl@738f719f 2022-06-23 09:50:10,417 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered provider: org.eclipse.jetty.http.HttpFieldPreEncoder in bundle org.eclipse.jetty.http 2022-06-23 09:50:11,359 [pool-84-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.http.core/4.2.8. Missing service: [org.apache.karaf.http.core.ServletService, org.apache.karaf.http.core.ProxyService] 2022-06-23 09:50:11,729 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:50:11,735 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:50:11,753 [activator-1-thread-3] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:50:14,024 [pool-84-thread-1] INFO org.cytoscape.rest.internal.task.ResourceManager - ========== Cytoscape RESTful API registered core resources in (902) milliseconds. 2022-06-23 09:50:14,024 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - cyREST API Server initialized in 5339msec 2022-06-23 09:50:14,652 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3 2022-06-23 09:50:14,655 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - ========== Image saving process finished ============= 2022-06-23 09:50:14,673 [Task-Thread-3-Factory-0x20eb5050] INFO org.cytoscape.application.userlog - Image saving process finished in 0.012 sec. 2022-06-23 09:50:14,768 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - #CiaoBello 2022-06-23 09:50:14,790 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8 2022-06-23 09:50:14,805 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1 2022-06-23 09:50:14,811 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:50:14,819 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:50:14,830 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:50:14,976 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:50:15,089 [FelixStartLevel] INFO org.apache.aries.spifly.BaseActivator - Unregistered: org.apache.felix.framework.ServiceRegistrationImpl@738f719f 2022-06-23 09:50:15,151 [FelixStartLevel] INFO org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2... 2022-06-23 09:50:15,227 [FelixStartLevel] INFO org.cytoscape.rest.internal.CyActivator - Shutting down REST server... 2022-06-23 09:50:16,265 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8 2022-06-23 09:50:16,280 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:50:16,281 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8 2022-06-23 09:50:16,282 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:50:16,282 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:50:16,283 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:50:16,284 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8 2022-06-23 09:50:16,286 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:50:16,287 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-06-23 09:58:41,963 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from jmx.acl.cfg 2022-06-23 09:58:42,013 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.config.cfg 2022-06-23 09:58:42,047 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.jaas.cfg 2022-06-23 09:58:42,103 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.shell.cfg 2022-06-23 09:58:42,143 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.ops4j.pax.url.mvn.cfg 2022-06-23 09:58:42,179 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.jaas.cfg 2022-06-23 09:58:42,220 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.feature.cfg 2022-06-23 09:58:42,263 [FelixStartLevel] INFO org.apache.felix.fileinstall - Creating configuration from org.apache.karaf.command.acl.bundle.cfg 2022-06-23 09:58:43,603 [activator-1-thread-2] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Adding features: cytoscape-karaf/[3.9.1,3.9.1],cytoscape-gui/[3.9.1,3.9.1] 2022-06-23 09:58:44,353 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Changes to perform: 2022-06-23 09:58:44,353 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Region: root 2022-06-23 09:58:44,353 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Bundles to install: 2022-06-23 09:58:44,354 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-06-23 09:58:44,354 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:58:44,354 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-06-23 09:58:44,354 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-06-23 09:58:44,354 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:58:44,354 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:58:44,355 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:58:44,355 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-06-23 09:58:44,355 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-06-23 09:58:44,355 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-06-23 09:58:44,355 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:58:44,356 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:58:44,356 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:58:44,356 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:58:44,356 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-06-23 09:58:44,356 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:58:44,356 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-06-23 09:58:44,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-06-23 09:58:44,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:58:44,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:58:44,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:58:44,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:58:44,357 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-06-23 09:58:44,358 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-06-23 09:58:44,358 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:58:44,358 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-06-23 09:58:44,358 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-06-23 09:58:44,358 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-06-23 09:58:44,359 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-06-23 09:58:44,359 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-06-23 09:58:44,359 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-06-23 09:58:44,359 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:58:44,359 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:58:44,359 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:58:44,360 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:58:44,360 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-06-23 09:58:44,360 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-06-23 09:58:44,360 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-06-23 09:58:44,360 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-06-23 09:58:44,360 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-06-23 09:58:44,361 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-06-23 09:58:44,361 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-06-23 09:58:44,361 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-06-23 09:58:44,361 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-06-23 09:58:44,361 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-06-23 09:58:44,361 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-06-23 09:58:44,362 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-06-23 09:58:44,362 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-06-23 09:58:44,362 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-06-23 09:58:44,362 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-06-23 09:58:44,362 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-06-23 09:58:44,362 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-06-23 09:58:44,363 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-06-23 09:58:44,363 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-06-23 09:58:44,363 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-06-23 09:58:44,363 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-06-23 09:58:44,363 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-06-23 09:58:44,363 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-06-23 09:58:44,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-06-23 09:58:44,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-06-23 09:58:44,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-06-23 09:58:44,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-06-23 09:58:44,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-06-23 09:58:44,364 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-06-23 09:58:44,365 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-06-23 09:58:44,365 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-06-23 09:58:44,365 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-06-23 09:58:44,365 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-06-23 09:58:44,365 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-06-23 09:58:44,365 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-06-23 09:58:44,365 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-06-23 09:58:44,366 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-06-23 09:58:44,366 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-06-23 09:58:44,366 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-06-23 09:58:44,366 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-06-23 09:58:44,366 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-06-23 09:58:44,366 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-06-23 09:58:44,367 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-06-23 09:58:44,367 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-06-23 09:58:44,367 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-06-23 09:58:44,367 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-06-23 09:58:44,367 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-06-23 09:58:44,367 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-06-23 09:58:44,368 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-06-23 09:58:44,368 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-06-23 09:58:44,369 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-06-23 09:58:44,369 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-06-23 09:58:44,369 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-06-23 09:58:44,370 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-06-23 09:58:44,370 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-06-23 09:58:44,370 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-06-23 09:58:44,371 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-06-23 09:58:44,371 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-06-23 09:58:44,374 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Installing bundles: 2022-06-23 09:58:44,375 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.activation/com.springsource.javax.activation/1.1.1 2022-06-23 09:58:44,410 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.xml.stream/com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:58:44,441 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/edge-bundler-impl/3.9.1 2022-06-23 09:58:44,474 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:javax.ws.rs/javax.ws.rs-api/2.1 2022-06-23 09:58:44,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:58:44,547 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:58:44,577 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:58:44,617 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.blueprint/org.apache.aries.blueprint.core.compatibility/1.0.0 2022-06-23 09:58:44,644 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.aries.proxy/org.apache.aries.proxy/1.1.6 2022-06-23 09:58:44,675 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:commons-io/commons-io/2.1 2022-06-23 09:58:44,706 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:58:44,731 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.bundle/org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:58:44,765 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:58:44,795 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.deployer/org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:58:44,820 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.boot/4.2.8 2022-06-23 09:58:44,846 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.diagnostic/org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:58:44,874 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.features/org.apache.karaf.features.command/4.2.8 2022-06-23 09:58:44,906 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.instance/org.apache.karaf.instance.core/4.2.8 2022-06-23 09:58:44,942 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas.blueprint/org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:58:44,972 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:58:45,002 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:58:45,074 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.jaas/org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:58:45,156 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.log/org.apache.karaf.log.core/4.2.8 2022-06-23 09:58:45,186 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.service/org.apache.karaf.service.core/4.2.8 2022-06-23 09:58:45,216 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:58:45,245 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.console/4.2.8 2022-06-23 09:58:45,274 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.core/4.2.8 2022-06-23 09:58:45,316 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.shell/org.apache.karaf.shell.table/4.2.8 2022-06-23 09:58:45,341 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.karaf.system/org.apache.karaf.system.core/4.2.8 2022-06-23 09:58:45,371 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.jaxb-impl/2.1.6_1 2022-06-23 09:58:45,414 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.bundles/org.apache.servicemix.bundles.xmlbeans/2.4.0_5 2022-06-23 09:58:45,483 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:58:45,508 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:58:45,537 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:58:45,564 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.apache.servicemix.specs/org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:58:45,589 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/api-bundle/3.9.1 2022-06-23 09:58:45,628 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/app-impl/3.9.1 2022-06-23 09:58:45,668 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/application-impl/3.9.1 2022-06-23 09:58:45,705 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/application-metadata-impl/3.9.1 2022-06-23 09:58:45,730 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/cmdline/3.9.1 2022-06-23 09:58:45,751 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/cmdline-impl/3.9.1 2022-06-23 09:58:45,772 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/command-executor-impl/3.9.1 2022-06-23 09:58:45,800 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/core-task-impl/3.9.1 2022-06-23 09:58:45,853 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/custom-graphics-internal/3.9.1 2022-06-23 09:58:45,894 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/diagnostics-impl/3.9.1 2022-06-23 09:58:45,919 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/ding-presentation-impl/3.9.1 2022-06-23 09:58:45,965 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/editor-impl/3.9.1 2022-06-23 09:58:45,992 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-functions-impl/3.9.1 2022-06-23 09:58:46,018 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/equations-impl/3.9.1 2022-06-23 09:58:46,054 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/event-impl/3.9.1 2022-06-23 09:58:46,083 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/filter2-impl/3.9.1 2022-06-23 09:58:46,116 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/graphml-impl/3.9.1 2022-06-23 09:58:46,147 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/group-impl/3.9.1 2022-06-23 09:58:46,177 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/gui-cmdline-parser-impl/3.9.1 2022-06-23 09:58:46,201 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/io-impl/3.9.1 2022-06-23 09:58:46,239 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/datasource-impl/3.9.1 2022-06-23 09:58:46,263 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/jobs-impl/3.9.1 2022-06-23 09:58:46,290 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-cytoscape-impl/3.9.1 2022-06-23 09:58:46,323 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-impl/3.9.1 2022-06-23 09:58:46,355 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/layout-prefuse-impl/3.9.1 2022-06-23 09:58:46,388 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/linkout-impl/3.9.1 2022-06-23 09:58:46,420 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/manual-layout-impl/3.9.1 2022-06-23 09:58:46,459 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/model-impl/3.9.1 2022-06-23 09:58:46,700 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/presentation-impl/3.9.1 2022-06-23 09:58:46,727 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/property-impl/3.9.1 2022-06-23 09:58:46,756 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/scripting-impl/3.9.1 2022-06-23 09:58:46,790 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/search-impl/3.9.1 2022-06-23 09:58:46,821 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/session-impl/3.9.1 2022-06-23 09:58:46,853 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/splash-updater-impl/3.9.1 2022-06-23 09:58:46,880 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-application-impl/3.9.1 2022-06-23 09:58:46,965 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/swing-util-impl/3.9.1 2022-06-23 09:58:47,002 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-browser-impl/3.9.1 2022-06-23 09:58:47,039 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-import-impl/3.9.1 2022-06-23 09:58:47,272 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/table-presentation-impl/3.9.1 2022-06-23 09:58:47,321 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape.distribution/third-party/3.9.1 2022-06-23 09:58:47,621 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/util-impl/3.9.1 2022-06-23 09:58:47,651 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-impl/3.9.1 2022-06-23 09:58:47,680 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/viewmodel-impl/3.9.1 2022-06-23 09:58:47,721 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-core-impl/3.9.1 2022-06-23 09:58:47,749 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/vizmap-gui-impl/3.9.1 2022-06-23 09:58:47,787 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/webservice-impl/3.9.1 2022-06-23 09:58:47,818 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-impl/3.9.1 2022-06-23 09:58:47,849 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.cytoscape/work-swing-impl/3.9.1 2022-06-23 09:58:47,885 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-builtins/3.13.2 2022-06-23 09:58:47,922 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-reader/3.13.2 2022-06-23 09:58:47,957 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal/3.13.2 2022-06-23 09:58:47,987 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.jline/jline-terminal-jansi/3.13.2 2022-06-23 09:58:48,013 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm/7.2 2022-06-23 09:58:48,043 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-commons/7.2 2022-06-23 09:58:48,070 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-tree/7.2 2022-06-23 09:58:48,094 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-analysis/7.2 2022-06-23 09:58:48,124 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:org.ow2.asm/asm-util/7.2 2022-06-23 09:58:48,153 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - mvn:cytoscape-temp/uk.ac.ebi.enfin.mi.cluster.micluster/1.6 2022-06-23 09:58:49,592 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Starting bundles: 2022-06-23 09:58:49,596 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.splash-updater-impl/3.9.1 2022-06-23 09:58:49,609 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.diagnostics-impl/3.9.1 2022-06-23 09:58:49,623 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.api/1.0.1 2022-06-23 09:58:49,629 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm/7.2.0 2022-06-23 09:58:49,634 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree/7.2.0 2022-06-23 09:58:49,639 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.commons/7.2.0 2022-06-23 09:58:49,644 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.proxy/1.1.6 2022-06-23 09:58:49,659 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:58:49,713 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintExtender - No quiesce support is available, so blueprint components will not participate in quiesce operations 2022-06-23 09:58:49,909 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.core/1.10.2 has been started 2022-06-23 09:58:49,910 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:58:49,938 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.aries.blueprint.cm/1.3.1 has been started 2022-06-23 09:58:49,938 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.tree.analysis/7.2.0 2022-06-23 09:58:49,944 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.objectweb.asm.util/7.2.0 2022-06-23 09:58:49,952 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.blueprint/4.2.8 2022-06-23 09:58:49,967 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.deployer.features/4.2.8 2022-06-23 09:58:49,986 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.terminal/3.13.2 2022-06-23 09:58:49,991 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.reader/3.13.2 2022-06-23 09:58:49,997 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.jline.builtins/3.13.2 2022-06-23 09:58:50,002 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.core/4.2.8 2022-06-23 09:58:50,527 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.shell.core/4.2.8 has been started 2022-06-23 09:58:50,528 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:58:50,565 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:58:50,567 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.config/4.2.8 2022-06-23 09:58:50,585 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.modules/4.2.8 2022-06-23 09:58:50,613 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:58:50,648 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:58:50,652 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:58:50,654 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Updating commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:58:50,656 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.system.core/4.2.8 2022-06-23 09:58:50,683 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.system.core/4.2.8 2022-06-23 09:58:50,684 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.log.core/4.2.8 2022-06-23 09:58:50,714 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.log.core/4.2.8. Missing service: [org.apache.karaf.log.core.LogEventFormatter] 2022-06-23 09:58:50,715 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:58:50,717 [activator-1-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:58:50,737 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:58:50,738 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:58:50,791 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.bundle.core/4.2.8 2022-06-23 09:58:50,793 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.features.command/4.2.8 2022-06-23 09:58:50,819 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.features.command/4.2.8 2022-06-23 09:58:50,820 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.bundle.blueprintstate/4.2.8 2022-06-23 09:58:50,844 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.service.core/4.2.8 2022-06-23 09:58:50,861 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.service.core/4.2.8 2022-06-23 09:58:50,861 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.instance.core/4.2.8 2022-06-23 09:58:50,896 [features-3-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-06-23 09:58:50,897 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.shell.table/4.2.8 2022-06-23 09:58:50,903 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:58:50,922 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 has been started 2022-06-23 09:58:50,939 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.activation/1.1.1 2022-06-23 09:58:50,945 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - com.springsource.javax.xml.stream/1.0.1 2022-06-23 09:58:50,950 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.stax-api-1.0/2.9.0 2022-06-23 09:58:50,969 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxb-api-2.1/1.2.0 2022-06-23 09:58:50,988 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.jaxb-impl/2.1.6.1 2022-06-23 09:58:50,994 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - uk.ac.ebi.enfin.mi.cluster/1.6.0 2022-06-23 09:58:51,001 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.third-party/3.9.1 2022-06-23 09:58:51,010 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.bundles.xmlbeans/2.4.0.5 2022-06-23 09:58:51,015 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.commons.io/2.1.0 2022-06-23 09:58:51,025 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.saaj-api-1.3/2.9.0 2022-06-23 09:58:51,042 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.apache.servicemix.specs.jaxws-api-2.2/2.9.0 2022-06-23 09:58:51,062 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - javax.ws.rs-api/2.1.0 2022-06-23 09:58:51,070 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline/3.9.1 2022-06-23 09:58:51,075 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.api-bundle/3.9.1 2022-06-23 09:58:51,086 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.property.internal/3.9.1 2022-06-23 09:58:51,137 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.cmdline-impl/3.9.1 2022-06-23 09:58:51,145 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.event-impl/3.9.1 2022-06-23 09:58:51,156 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.util-impl/3.9.1 2022-06-23 09:58:51,174 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-impl/3.9.1 2022-06-23 09:58:51,214 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io.datasource-impl/3.9.1 2022-06-23 09:58:51,231 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.application-impl/3.9.1 2022-06-23 09:58:51,245 [features-3-thread-1] INFO org.cytoscape.application.userlog - Setting file directory = /home/psgendb/CytoscapeConfiguration 2022-06-23 09:58:51,246 [features-3-thread-1] INFO org.cytoscape.application.userlog - Write tracker.active.session into /home/psgendb/CytoscapeConfiguration 2022-06-23 09:58:51,262 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-util-impl/3.9.1 2022-06-23 09:58:51,319 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.model-impl/3.9.1 2022-06-23 09:58:51,708 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-impl/3.9.1 2022-06-23 09:58:51,733 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.presentation-impl/3.9.1 2022-06-23 09:58:51,747 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.work-swing-impl/3.9.1 2022-06-23 09:58:51,802 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.viewmodel-impl/3.9.1 2022-06-23 09:58:51,864 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.view.vizmap-impl/3.9.1 2022-06-23 09:58:51,939 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-impl/3.9.1 2022-06-23 09:58:51,954 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.group-impl/3.9.1 2022-06-23 09:58:52,121 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-core-impl/3.9.1 2022-06-23 09:58:52,129 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.session-impl/3.9.1 2022-06-23 09:58:52,144 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.custom-graphics-internal/3.9.1 2022-06-23 09:58:52,311 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.ding-presentation-impl/3.9.1 2022-06-23 09:58:52,456 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-presentation-impl/3.9.1 2022-06-23 09:58:52,529 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.io-impl/3.9.1 2022-06-23 09:58:52,624 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.core-task-impl/3.9.1 2022-06-23 09:58:52,779 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.command-executor-impl/3.9.1 2022-06-23 09:58:52,839 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.swing-application-impl/3.9.1 2022-06-23 09:58:54,190 [features-3-thread-1] WARN org.cytoscape.application.userlog - The virtual key 'VK_?' does not exist. 2022-06-23 09:58:54,443 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.jobs-impl/3.9.1 2022-06-23 09:58:54,514 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-cytoscape-impl/3.9.1 2022-06-23 09:58:54,550 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.manual-layout-impl/3.9.1 2022-06-23 09:58:54,723 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-import-impl/3.9.1 2022-06-23 09:58:55,217 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.filter2-impl/3.9.1 2022-06-23 09:58:55,465 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.vizmap-gui-impl/3.9.1 2022-06-23 09:58:55,817 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: ID = 2 2022-06-23 09:58:55,818 [features-3-thread-1] INFO org.cytoscape.application.userlog - CyNetwork w/ private tables created: Base Graph ID = 43 2022-06-23 09:58:56,077 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.webservice-impl/3.9.1 2022-06-23 09:58:56,150 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.layout-prefuse-impl/3.9.1 2022-06-23 09:58:56,164 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.editor-impl/3.9.1 2022-06-23 09:58:56,187 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.table-browser-impl/3.9.1 2022-06-23 09:58:56,461 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.search-impl/3.9.1 2022-06-23 09:58:56,543 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.linkout-impl/3.9.1 2022-06-23 09:58:56,572 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - edge-bundler/3.9.1 2022-06-23 09:58:56,588 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.graphml-impl/3.9.1 2022-06-23 09:58:56,600 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.app-impl/3.9.1 2022-06-23 09:58:56,744 [pool-10-thread-1] INFO org.cytoscape.application.userlog - Server socket started on 127.0.0.1:2607 2022-06-23 09:58:56,761 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.scripting-impl/3.9.1 2022-06-23 09:58:56,807 [features-3-thread-1] INFO org.apache.aries.blueprint.container.BlueprintContainerImpl - Blueprint bundle org.cytoscape.scripting-impl/3.9.1 is waiting for namespace handlers [http://karaf.apache.org/xmlns/shell/v1.0.1, http://www.osgi.org/xmlns/blueprint/v1.0.1] 2022-06-23 09:58:56,808 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.gui-cmdline-parser-impl/3.9.1 2022-06-23 09:58:56,831 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - org.cytoscape.equations-functions-impl/3.9.1 2022-06-23 09:58:56,853 [features-3-thread-1] INFO org.apache.karaf.deployer.features.osgi.Activator - Deployment finished. Registering FeatureDeploymentListener 2022-06-23 09:58:58,189 [pool-9-thread-1] INFO org.cytoscape.io.webservice.biomart.rest.BiomartRestClient - Biomart Service URL is: http://www.ensembl.org/biomart/martservice 2022-06-23 09:58:58,244 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: BioMart Client 2022-06-23 09:58:58,384 [features-3-thread-1] INFO org.apache.karaf.features.internal.service.FeaturesServiceImpl - Done. 2022-06-23 09:58:58,570 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:58:58,571 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:58:58,572 [pool-9-thread-1] WARN org.cytoscape.application.userlog - Specified factory is null or has wrong DataCategory (SESSION) 2022-06-23 09:58:59,014 [pool-9-thread-1] INFO org.cytoscape.application.userlog - New network import client registered: Universal Interaction Database Client 2022-06-23 09:58:59,070 [Thread-16] ERROR org.cytoscape.opencl.layout.CyActivator - No OpenCL compatible device found. Cannot register 'Prefuse Force Directed OpenCL Layout'. 2022-06-23 09:58:59,623 [Task-Thread-1-Factory-0x657119aa] INFO org.cytoscape.io.internal.read.GenericReaderManager - Filter returns Accepted. Need to check priority: org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@40b0763b 2022-06-23 09:58:59,624 [Task-Thread-1-Factory-0x657119aa] INFO org.cytoscape.io.internal.read.GenericReaderManager - Successfully found compatible ReaderFactory org.cytoscape.io.internal.read.vizmap.VizmapXMLReaderFactory@40b0763b 2022-06-23 09:58:59,632 [Task-Thread-3-Factory-0x657119aa] INFO org.cytoscape.application.userlog - Custom Graphics Image property file loaded from: /home/psgendb/CytoscapeConfiguration/images3 2022-06-23 09:58:59,638 [Task-Thread-3-Factory-0x657119aa] INFO org.cytoscape.application.userlog - Image loading process finished in 0.007 sec. 2022-06-23 09:58:59,639 [Task-Thread-3-Factory-0x657119aa] INFO org.cytoscape.application.userlog - Currently, -1 images are available. 2022-06-23 09:59:00,255 [Task-Thread-3-Factory-0x657119aa] INFO org.cytoscape.application.userlog - Image saving process finished in 0.626 sec. 2022-06-23 09:59:01,487 [pool-9-thread-1] INFO org.cytoscape.diffusion.internal.rest.RemoteLogger - No property set for cytoscape.remotelogging.senderaddressservicehostname; setting logger sender address service hostname to: http://35.197.44.209 2022-06-23 09:59:02,100 [pool-84-thread-1] INFO org.cytoscape.rest.internal.CyActivator - Initializing cyREST API server... 2022-06-23 09:59:04,062 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Examining bundle for SPI provider: org.eclipse.jetty.http 2022-06-23 09:59:04,066 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Found SPI resource: bundle://138.0:0/META-INF/services/org.eclipse.jetty.http.HttpFieldPreEncoder 2022-06-23 09:59:04,102 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Loaded SPI provider: class org.eclipse.jetty.http.Http1FieldPreEncoder 2022-06-23 09:59:04,104 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered service: org.apache.felix.framework.ServiceRegistrationImpl@593a30ae 2022-06-23 09:59:04,105 [pool-84-thread-1] INFO org.apache.aries.spifly.BaseActivator - Registered provider: org.eclipse.jetty.http.HttpFieldPreEncoder in bundle org.eclipse.jetty.http 2022-06-23 09:59:05,073 [pool-84-thread-1] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Command registration delayed for bundle org.apache.karaf.http.core/4.2.8. Missing service: [org.apache.karaf.http.core.ProxyService, org.apache.karaf.http.core.ServletService] 2022-06-23 09:59:05,379 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:59:05,386 [activator-1-thread-2] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:59:05,400 [activator-1-thread-3] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Registering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:59:05,941 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - Start Saving images to: /home/psgendb/CytoscapeConfiguration/images3 2022-06-23 09:59:05,944 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - ========== Image saving process finished ============= 2022-06-23 09:59:05,960 [Task-Thread-3-Factory-0x657119aa] INFO org.cytoscape.application.userlog - Image saving process finished in 0.011 sec. 2022-06-23 09:59:06,057 [AWT-EventQueue-0] INFO org.cytoscape.application.userlog - #CiaoBello 2022-06-23 09:59:06,080 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.shell.core/4.2.8 2022-06-23 09:59:06,094 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.cytoscape.scripting-impl/3.9.1 2022-06-23 09:59:06,099 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.karaf.jaas.blueprint.config/4.2.8 2022-06-23 09:59:06,106 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.cm/1.3.1 2022-06-23 09:59:06,116 [FelixShutdown] INFO org.apache.aries.blueprint.container.BlueprintExtender - Destroying container for blueprint bundle org.apache.aries.blueprint.core/1.10.2 2022-06-23 09:59:06,174 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.http.core/4.2.8 2022-06-23 09:59:06,167 [pool-84-thread-1] ERROR org.cytoscape.rest.internal.CyActivator - Failed to initialize cyREST server. org.osgi.framework.BundleException: The framework has been shutdown. at org.apache.felix.framework.Felix.installBundle(Felix.java:2995) ~[?:?] at org.apache.felix.framework.BundleContextImpl.installBundle(BundleContextImpl.java:167) ~[?:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installBundleFromResource(OSGiJAXRSManager.java:266) ~[!/:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installBundlesFromResources(OSGiJAXRSManager.java:238) ~[!/:?] at org.cytoscape.rest.internal.task.OSGiJAXRSManager.installOSGiJAXRSBundles(OSGiJAXRSManager.java:130) ~[!/:?] at org.cytoscape.rest.internal.CyActivator.lambda$startCyREST$0(CyActivator.java:325) [!/:?] at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) [?:?] at java.util.concurrent.FutureTask.run(FutureTask.java:264) [?:?] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) [?:?] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) [?:?] at java.lang.Thread.run(Thread.java:829) [?:?] 2022-06-23 09:59:06,225 [FelixStartLevel] INFO org.apache.aries.spifly.BaseActivator - Unregistered: org.apache.felix.framework.ServiceRegistrationImpl@593a30ae 2022-06-23 09:59:06,296 [FelixStartLevel] INFO org.cytoscape.cyndex2.internal.CyActivator - Shutting down CyNDEx-2... 2022-06-23 09:59:06,356 [FelixStartLevel] INFO org.cytoscape.rest.internal.CyActivator - Shutting down REST server... 2022-06-23 09:59:06,936 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.system.core/4.2.8 2022-06-23 09:59:06,951 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.features.command/4.2.8 2022-06-23 09:59:06,953 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.diagnostic.core/4.2.8 2022-06-23 09:59:06,954 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.jaas.command/4.2.8 2022-06-23 09:59:06,956 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.service.core/4.2.8 2022-06-23 09:59:06,957 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.instance.core/4.2.8 2022-06-23 09:59:06,958 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.log.core/4.2.8 2022-06-23 09:59:06,960 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.shell.commands/4.2.8 2022-06-23 09:59:06,961 [FelixStartLevel] INFO org.apache.karaf.shell.impl.action.osgi.CommandExtension - Unregistering commands for bundle org.apache.karaf.bundle.core/4.2.8