# Starting IndelFinder. # Computing sample stats. # sample=HWI-BRUNOP20X 993 1 # offset min=37 max=208 mean=122.699461 sd=28.485715 se=0.138448 # Finding good singletons. Num good shadow reads : 531 Num semi-aligned reads : 96 Num insertion cand reads : 0 not semi-aligned : 0 Num deletion cand reads : 8 not semi-aligned : 8 Num duplication cand reads: 1213 not semi-aligned : 1154 Num inversion cand reads : 28 not semi-aligned : 27 Num chimeric pair reads : 0 not semi-aligned : 0