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\begin{table}[ht]
\begin{center}
\caption{All statistics are based on contigs of size $\geq$ 500 bp, unless otherwise noted (e.g., "\# contigs ($\geq$ 0 bp)" and "Total length ($\geq$ 0 bp)" include all contigs).}
\begin{tabular}{|l*{2}{|r}|}
\hline
Assembly & meta\_contigs\_1 & meta\_contigs\_2 \\ \hline
\# contigs ($\geq$ 1000 bp) & 6 & 4 \\ \hline
\# contigs ($\geq$ 5000 bp) & 3 & 4 \\ \hline
\# contigs ($\geq$ 10000 bp) & 3 & 3 \\ \hline
\# contigs ($\geq$ 25000 bp) & 1 & 1 \\ \hline
\# contigs ($\geq$ 50000 bp) & 0 & 0 \\ \hline
Total length ($\geq$ 1000 bp) & {\bf 64988} & 60775 \\ \hline
Total length ($\geq$ 5000 bp) & 56606 & {\bf 60775} \\ \hline
Total length ($\geq$ 10000 bp) & {\bf 56606} & 53787 \\ \hline
Total length ($\geq$ 25000 bp) & {\bf 27969} & 27260 \\ \hline
Total length ($\geq$ 50000 bp) & 0 & 0 \\ \hline
\# contigs & 11 & 8 \\ \hline
Largest contig & {\bf 27969} & 27260 \\ \hline
Total length & {\bf 69110} & 63778 \\ \hline
Reference length & 64999 & 64999 \\ \hline
GC (\%) & 40.75 & 40.78 \\ \hline
Reference GC (\%) & 40.73 & 40.73 \\ \hline
N50 & {\bf 17535} & 16099 \\ \hline
NG50 & {\bf 17535} & 16099 \\ \hline
N90 & 3427 & {\bf 6988} \\ \hline
NG90 & 3898 & {\bf 6988} \\ \hline
auN & 18007.5 & {\bf 18221.4} \\ \hline
auNG & {\bf 19146.5} & 17879.1 \\ \hline
L50 & 2 & 2 \\ \hline
LG50 & 2 & 2 \\ \hline
L90 & 5 & {\bf 4} \\ \hline
LG90 & 4 & 4 \\ \hline
\# misassemblies & {\bf 0} & 3 \\ \hline
\# misassembled contigs & {\bf 0} & 1 \\ \hline
Misassembled contigs length & {\bf 0} & 763 \\ \hline
\# local misassemblies & 0 & 0 \\ \hline
\# scaffold gap ext. mis. & 0 & 0 \\ \hline
\# scaffold gap loc. mis. & 0 & 0 \\ \hline
\# unaligned mis. contigs & 0 & 0 \\ \hline
\# unaligned contigs & 0 + 0 part & 0 + 0 part \\ \hline
Unaligned length & 0 & 0 \\ \hline
Genome fraction (\%) & {\bf 98.397} & 96.609 \\ \hline
Duplication ratio & 1.081 & {\bf 1.015} \\ \hline
\# N's per 100 kbp & 18.81 & {\bf 0.00} \\ \hline
\# mismatches per 100 kbp & {\bf 54.99} & 65.89 \\ \hline
\# indels per 100 kbp & {\bf 7.24} & 9.41 \\ \hline
Largest alignment & {\bf 27969} & 27260 \\ \hline
Total aligned length & {\bf 69108} & 63741 \\ \hline
NA50 & {\bf 17534} & 16099 \\ \hline
NGA50 & {\bf 17534} & 16099 \\ \hline
NA90 & 3427 & {\bf 6988} \\ \hline
NGA90 & 3898 & {\bf 6988} \\ \hline
auNA & 18006.7 & {\bf 18214.4} \\ \hline
auNGA & {\bf 19145.6} & 17872.2 \\ \hline
LA50 & 2 & 2 \\ \hline
LGA50 & 2 & 2 \\ \hline
LA90 & 5 & {\bf 4} \\ \hline
LGA90 & 4 & 4 \\ \hline
\end{tabular}
\end{center}
\end{table}
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