BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.Query= gi|1709271|sp|P54929|NIFA_AZOLI NIF-SPECIFIC REGULATORY PROTEIN. (624 letters) Database: PDB protein sequences 7378 sequences; 1,543,095 total letters
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Database: PDB protein sequences Posted date: Dec 29, 1999 5:21 PM Number of letters in database: 1,543,095 Number of sequences in database: 7378 Lambda K H 0.320 0.138 0.399 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1512037 Number of Sequences: 7378 Number of extensions: 54573 Number of successful extensions: 81 Number of sequences better than 10.0: 0 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81 Number of HSP's gapped (non-prelim): 0 length of query: 624 length of database: 1,543,095 effective HSP length: 46 effective length of query: 578 effective length of database: 1,203,707 effective search space: 695742646 effective search space used: 695742646 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.8 bits) S2: 56 (26.2 bits)