BLASTX 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.Query= gi|1347782|gb|G25550.1|G25550 human STS EST47652. (379 letters) Database: Non-redundant SwissProt sequences 82,258 sequences; 29,652,561 total letters
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Database: Non-redundant SwissProt sequences Posted date: Dec 18, 1999 8:26 PM Number of letters in database: 29,652,561 Number of sequences in database: 82,258 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14686001 Number of Sequences: 82258 Number of extensions: 235383 Number of successful extensions: 396 Number of sequences better than 10.0: 0 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 396 Number of HSP's gapped (non-prelim): 0 length of query: 126 length of database: 29,652,561 effective HSP length: 48 effective length of query: 77 effective length of database: 25,704,177 effective search space: 1979221629 effective search space used: 1979221629 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 60 (27.8 bits)