All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs).

Assembly                    SOAPdenovo2-1.scafSeq  SOAPdenovo2-1.scafSeq_broken
# contigs (>= 0 bp)         782321                 -                           
# contigs (>= 1000 bp)      46428                  17631                       
# contigs (>= 5000 bp)      14114                  45                          
# contigs (>= 10000 bp)     4475                   2                           
# contigs (>= 25000 bp)     347                    0                           
# contigs (>= 50000 bp)     17                     0                           
Total length (>= 0 bp)      398220071              -                           
Total length (>= 1000 bp)   226644523              24391443                    
Total length (>= 5000 bp)   137939912              294201                      
Total length (>= 10000 bp)  70173693               23847                       
Total length (>= 25000 bp)  11327696               0                           
Total length (>= 50000 bp)  1134473                0                           
# contigs                   93084                  105001                      
Largest contig              147211                 12675                       
Total length                257694728              82807957                    
GC (%)                      52.88                  53.10                       
N50                         5434                   775                         
N75                         3009                   612                         
L50                         12365                  37155                       
L75                         26991                  67423                       
# N's per 100 kbp           55922.16               13.78