All statistics are based on contigs of size >= 500 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs).

Assembly                    SOAPdenovo2-1.scafSeq  SOAPdenovo2-1.scafSeq_broken
# contigs (>= 0 bp)         482749                 -                           
# contigs (>= 1000 bp)      58578                  46216                       
# contigs (>= 5000 bp)      12704                  2717                        
# contigs (>= 10000 bp)     3535                   789                         
# contigs (>= 25000 bp)     327                    80                          
# contigs (>= 50000 bp)     39                     11                          
Total length (>= 0 bp)      341262488              -                           
Total length (>= 1000 bp)   228456580              101401077                   
Total length (>= 5000 bp)   119830723              26636781                    
Total length (>= 10000 bp)  57145040               13519626                    
Total length (>= 25000 bp)  11730301               3021111                     
Total length (>= 50000 bp)  2507623                745302                      
# contigs                   98478                  128070                      
Largest contig              110960                 110960                      
Total length                255861695              157968718                   
GC (%)                      54.82                  54.98                       
N50                         4611                   1364                        
N75                         2309                   807                         
L50                         14391                  26861                       
L75                         34701                  65279                       
# N's per 100 kbp           29451.44               18.54