BiocUpgrade {BiocInstaller} | R Documentation |
Downloads the latest version of the BiocInstaller package, and upgrades all currently installed packages to the latest repositories for this version of R.
To upgrade, use:
## 'http' if 'https' unavailable source("https://bioconductor.org/biocLite.R") biocLite("BiocUpgrade")
biocLite
Installs/updates Bioconductor/CRAN packages.
chooseBioCmirror
lets you choose from a list of all
public Bioconductor mirror URLs.
chooseCRANmirror
lets you choose from a list of all
public CRAN mirror URLs.
biocinstallRepos
returns the Bioconductor and CRAN
repositories used by biocLite
.
install.packages
installs the packages themselves.
## Not run: source("https://bioconductor.org/biocLite.R") biocLite("BiocUpgrade") ## End(Not run)