Package Groups {BiocInstaller} | R Documentation |
Returns character vectors of packages associated with Bioconductor publications,
which can then be passed to biocLite()
monograph_group() RBioinf_group() biocases_group() all_group()
character()
of package names.
biocLite
Installs/updates Bioconductor/CRAN packages.
biocinstallRepos
returns the Bioconductor and CRAN
repositories used by biocLite
.
install.packages
installs the packages themselves.
chooseBioCmirror
lets you choose from a list of all
public Bioconductor mirror URLs.
chooseCRANmirror
lets you choose from a list of all
public CRAN mirror URLs.
## Get the names of packages used in the book ## "Bioconductor Case Studies": biocases_group() ## Get the names of packages used in the book ## "R Programming for Bioinformatics": RBioinf_group() ## Get the names of packages used in the monograph ## "Bioinformatics and Computational Biology Solutions ## Using R and Bioconductor": monograph_group() ## Get the names of all Bioconductor software packages all_group()