LOCUS       NZ_ACVX01000066         3611 bp    DNA     linear   CON 10-NOV-2010
DEFINITION  Clostridium thermocellum DSM 2360 ctg00005, whole genome shotgun
            sequence.
ACCESSION   NZ_ACVX01000066 NZ_ACVX00000000
VERSION     NZ_ACVX01000066.1  GI:256006119
KEYWORDS    WGS.
SOURCE      Clostridium thermocellum DSM 2360
  ORGANISM  Clostridium thermocellum DSM 2360
            Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
            Clostridium.
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            ACVX01000066.
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Clostridium thermocellum DSM 2360"
                     /mol_type="genomic DNA"
                     /strain="DSM 2360"
                     /isolation_source="contaminant of Clostridium thermocellum
                     strain LQ8"
                     /db_xref="taxon:572545"
     gene            complement(<1..184)
                     /locus_tag="ClothDRAFT_2908"
     CDS             complement(<1..184)
                     /locus_tag="ClothDRAFT_2908"
                     /inference="ab initio prediction:Prodigal:1.4"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="ZP_05431047.1"
                     /db_xref="GI:256006120"
                     /translation="MPEASVTTSSIARYALEKYVSDHIAKRDGTKILIEINTADATEE
                     DIKNLYDLLSKLFDETK"
     gene            complement(532..1131)
                     /locus_tag="ClothDRAFT_2909"
     CDS             complement(532..1131)
                     /locus_tag="ClothDRAFT_2909"
                     /inference="ab initio prediction:Prodigal:1.4"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="ZP_05431048.1"
                     /db_xref="GI:256006121"
                     /translation="MPRGVASVFSTLQNIDMFKQIEVLFNTKGIRLELPNTNKVQVWT
                     TEGEMLNIEKKELLQNTSDISDYLIQFWWPQMDDVAIKLTCQGYLCVCDIYLDGLDES
                     QTKVILDLLIIMTLQRFEIVGFVIDREELVSEFEWNKFFSNKEYLDSHYLELCGLKIF
                     KKYELKEYKTEQLIDFKRDCVYVAIPNRERSTITLYLLC"
     gene            complement(1147..2103)
                     /locus_tag="ClothDRAFT_2910"
     CDS             complement(1147..2103)
                     /locus_tag="ClothDRAFT_2910"
                     /inference="protein motif:SMART:SM00306"
                     /note="SMART: Hedgehog/intein hint domain protein;
                     KEGG: hch:HCH_02073 rhs family protein"
                     /codon_start=1
                     /transl_table=11
                     /product="Hedgehog/intein hint domain protein"
                     /protein_id="ZP_05431049.1"
                     /db_xref="GI:256006122"
                     /db_xref="InterPro:IPR003587"
                     /db_xref="InterPro:IPR006141"
                     /translation="MTTALSFSMDGFDMLAMGISLFEPSNALVEFNRKLHSNALYNGF
                     QIAVNALAVFSAGAASTMNCFVAGTMILTATGLVAIENIKAGDKVIATNPETFEVAEK
                     TVLETYVRDTTELLHLTINGEVIKTTFEHPFYVKDVGFVEAGKLQIGDRLVDSRGNVL
                     VLEGKKLEITDKPVKVYNFKVDNFHTYHVGENRVLVHNANKYVKGTSSTTGKQAQIIG
                     ATREQKVANITGGQVSGAKIKSSAGGTDIDVIGANGELIMVGGPAKANDLGKLGQVIK
                     IYQDEAAIRGVGVKAYFAEGTPQNVIDFAIKKLGTDNVVIFK"
     misc_feature    complement(1510..1914)
                     /locus_tag="ClothDRAFT_2910"
                     /note="Hedgehog/Intein domain, found in Hedgehog proteins
                     as well as proteins which contain inteins and undergo
                     protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In
                     protein splicing an intervening polypeptide sequence - the
                     intein - is excised from a...; Region: Hint; cd00081"
                     /db_xref="CDD:73181"
     misc_feature    complement(order(1510..1515,1711..1713,1912..1914))
                     /locus_tag="ClothDRAFT_2910"
                     /note="protein-splicing catalytic site; other site"
                     /db_xref="CDD:73181"
     misc_feature    complement(order(1711..1713,1720..1722,1912..1914))
                     /locus_tag="ClothDRAFT_2910"
                     /note="thioester formation/cholesterol transfer; other
                     site"
                     /db_xref="CDD:73181"
     misc_feature    complement(1507..1896)
                     /locus_tag="ClothDRAFT_2910"
                     /note="Protein of unknown function (DUF1557); Region:
                     DUF1557; pfam07591"
                     /db_xref="CDD:148935"
     gene            complement(2317..2934)
                     /locus_tag="ClothDRAFT_2911"
     CDS             complement(2317..2934)
                     /locus_tag="ClothDRAFT_2911"
                     /inference="ab initio prediction:Prodigal:1.4"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="ZP_05431050.1"
                     /db_xref="GI:256006123"
                     /translation="MIDLIKLEITRTKFIKIYLPCEKKNIKPFDIISIKYLKDQIEYD
                     LYVDDFATEAIQILKNLLKKALNFDLQIQRKYIDKGIGYYYNIYANELWTTDDENVIQ
                     SLVDPSQNFSLWSTPTHIGIETFMYNIDDKIYIEISPIYKWNCDYPENESKYETFDNF
                     LNNYKPIDIVSIDRSVAVRWLDFCCDMIKIFKENDKKYLKEDNTN"
     gene            complement(3038..>3611)
                     /locus_tag="ClothDRAFT_2912"
     CDS             complement(3038..>3611)
                     /locus_tag="ClothDRAFT_2912"
                     /inference="similar to AA sequence:KEGG:NMB0655"
                     /note="KEGG: nme:NMB0655 hypothetical protein"
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="ZP_05431051.1"
                     /db_xref="GI:256006124"
                     /db_xref="InterPro:IPR006141"
                     /translation="GFVEAGKLQVGDKLLDSKGNVLVVEEKKIKITDKPIKVYNFQVA
                     DFHTYHVGNNEVLVHNVKYNSPDGKYTYKNGIYEDADYHGKVDDSIKSKKPQDGQFAL
                     DNSVDIRDTSKRRVGIDINGDFVVLDHTGGEKFHGHVRPWSKGTPDLPPLTDRMKNAL
                     KKAGYVKEVAKKPKLTSKIIDMINEISKSN"
     misc_feature    complement(3431..>3611)
                     /locus_tag="ClothDRAFT_2912"
                     /note="Protein of unknown function (DUF1557); Region:
                     DUF1557; pfam07591"
                     /db_xref="CDD:148935"
ORIGIN      
        1 cttttgtttc gtcaaacagc ttggaaagaa ggtcgtagag attctttatg tcctcttctg
       61 tggcatctgc ggtgttgatt tcaattaaaa tttttgttcc atcacgcttg gcgatatggt
      121 cgctcacata cttctccaaa gcgtatcttg ctatgcttga tgtggtaacg cttgcttccg
      181 gcatttgcgc ttaaagttca tcgatgatag cgtccaattc atccgactgc ctttgtgtaa
      241 gccttacccg taacatacta tccttttctg tagacattat tatacctcct gtatttctta
      301 ttggtttaat tgtatcacaa tgtattataa tttgccaagc ttggataaag aagatagcca
      361 caccagccga aacggtgtgg ccttaaaaga ttttctattc ttctgactta tagactttta
      421 ttgttttatg attaccgtgc tcaaagacat aaattctttc tcatttagga caacgccaat
      481 ttatttaaca tctcatgtac caataaaaac ttctctgcat cctttgaact tctagcagag
      541 taagtataga gttattgtac tccgttcgcg atttggtata gcaacataaa cacaatctct
      601 tttaaagtct atcaactgct ctgttttata ttctttgagc tcatacttct taaatatttt
      661 taaaccgcat agttccaaat aatgactatc caaatactct ttgttactaa aaaatttgtt
      721 ccattcgaat tctgaaacga gttcctctct atcaatgaca aacccaacta tttcgaatct
      781 ttggagagtc ataatgatta ataagtcaag aataactttt gtttgacttt catctaatcc
      841 gtctaaataa atatcacata cacataaata cccttgacaa gttagtttta ttgcaacatc
      901 atccatctgg ggccaccaaa attgtattaa atagtcactt atatctgatg tgttttgaag
      961 taattctttt ttctcaatat ttagcatttc accttctgta gtccatactt gcactttatt
     1021 tgtattaggc aattcaagtc ttatcccctt agtgttaaaa agaacttcta tttgtttaaa
     1081 catatcaata ttttgaagtg tagaaaatac gctagcaaca ccccttggca taagcaacct
     1141 cctattctat ttaaatatta caacattatc tgtgcccagt ttttttatag caaaatcaat
     1201 tacattttgt ggtgtacctt ctgcaaaata cgccttaaca ccaactcctc ttatggctgc
     1261 ttcatcttga tatatcttaa taacttgacc caatttacca agatcatttg ctttcgctgg
     1321 tccaccaacc attattaatt cgccattagc tccaattaca tctatatctg ttcctccagc
     1381 acttgatttt atttttgctc cactaacttg tccacctgtt atatttgcaa ctttctgttc
     1441 tctagtcgca cctataattt gagcttgttt tcctgtagta ctactcgttc ccttaacata
     1501 cttattcgca ttatgaacca ataccctatt ttcgccaaca tgatacgtat gaaaattatc
     1561 aaccttaaaa ttgtaaacct ttacaggctt atctgttatt tcaagctttt taccttccaa
     1621 tactaaaaca ttacctcttg aatcaaccaa cctgtctcct atctgcagtt ttcccgcttc
     1681 aacaaaaccc acatctttta cataaaacgg atgctcaaag gttgtcttga ttacctctcc
     1741 attgattgtc aaatgcaaaa gctccgtcgt atctctcaca tatgtctcaa gcactgtctt
     1801 ttccgctact tcaaaagtct ccggattcgt cgcaattacc ttgtcccctg ccttgatatt
     1861 ctctatcgca accaagcctg tcgcagtcaa tatcattgta cctgcaacaa agcagttcat
     1921 tgtcgatgcc gccccggcac tgaaaacagc cagcgcgttt acagcaatct ggaatccgtt
     1981 ataaagtgca ttggaatgca gcttccggtt aaattcaacc aatgcattgg atggttcaaa
     2041 caacgatatt cccattgcca gcatgtcaaa tccatccata ctaaaagaaa gtgctgtggt
     2101 catataacat aaaacattcc actacctttg tacaacttgt aatgtgtttc ctgtctctga
     2161 atataattga attaatatat aaatataata tatattaaac aaaaaggtca cattagttga
     2221 aattacgtga cctgcaaatt ctccctatcc cttaagctta agttttttat gattcgttag
     2281 tagctttgta caaataaaaa attgccatat aaaaagctaa tttgtgttat cttcttttaa
     2341 gtacttttta tcgttttctt taaatatctt tatcatatca caacaaaagt ctagccatct
     2401 cacagcaaca cttctgtcaa ttgaaacaat atcaattggt ttgtaattat ttagaaaatt
     2461 gtcaaaagtt tcatatttac tttcattctc aggataatcg cagttccact tgtaaattgg
     2521 acttatttca atatatattt tatcatcaat attatacata aaagtttcaa tacctatatg
     2581 agttggagtt gaccaaaggc taaaattttg tgatggatca acaagacttt gaataacatt
     2641 ttcgtcatca gttgtccaca attcatttgc ataaatatta tagtaatatc caattccctt
     2701 atctatatat tttctctgta tttgtaagtc aaaatttaat gctttcttta gtaaattctt
     2761 taatatttgt attgcctccg ttgcaaaatc atcaacatat aaatcatatt ctatttggtc
     2821 tttcagatac tttatagata taatatcaaa tggctttata tttttctttt cacatggtaa
     2881 gtatatttta ataaattttg ttcttgtaat ttctaattta attaaatcaa tcatttcttc
     2941 aatcatcctt tactttttat ttgcacgaat ttcgtaaatt tcataaacta ctgctgaatt
     3001 actctattat tgttgtaatt cggaaaacgt tttgttttta atttgatttt gatatttcat
     3061 ttatcatatc aattatttta cttgtcaact taggtttttt agctacctcc ttaacatatc
     3121 ctgccttttt gagagcattt ttcatcctgt cagtcaaagg cggaagatct ggagtacctt
     3181 tactccaagg tctaacatgt ccatgaaact tttcaccacc tgtatgatct aacacaacaa
     3241 aatctccatt tatgtcaatt ccaactcttc tttttgatgt atctcttata tcaacagagt
     3301 tgtctaaagc aaactgaccg tcttgcggtt ttttactttt tatactatca tcaacttttc
     3361 cgtgataatc agcatcttca tatattccat ttttatatgt gtatttacca tctggtgaat
     3421 tatactttac gttatgaacc agcacttcat tattgccaac atgataagta tgaaaatcag
     3481 ctacttgaaa gttgtaaact ttaatcggtt tatcagttat ttttattttt ttctcttcca
     3541 ccaccaaaac attgcctttt gaatctagca gcttatctcc tacttgcagt tttcccgctt
     3601 caacaaaacc c
//
