# fasta3 -Q -n -b 20 -d 20 -m 0 -z 1 -E 1.0e-5 bio5920432747407671077.tmp.fasta @/home/psgendb/BIRCHDEV/dat/fasta/nt.nam 6 FASTA searches a protein or DNA sequence data bank version 36.3.6 Aug., 2014(preload9) Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: bio5920432747407671077.tmp.fasta 1>>>BOVPRL - 907 nt Library: @/home/psgendb/BIRCHDEV/dat/fasta/nt.nam 67548548229 residues in 24864151 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9962+/-0.00011; mu= 16.0780+/- 0.007 mean_var=82.7846+/-12.862, 0's: 43 Z-trim(106.0): 659 B-trim: 10837 in 4/93 Lambda= 0.140961 statistics sampled from 60000 (76444) to 1834820 sequences Algorithm: FASTA (3.8 Nov 2011) [optimized] Parameters: +5/-4 matrix (5:-4), open/ext: -12/-4 ktup: 6, E-join: 0.25 (0.147), E-opt: 0.05 (0.039), width: 16 Scan time: 6706.470 The best scores are: opt bits E(25038865) ref|NM_173953.2| Bos taurus prolactin (PRL), m ( 907) [f] 4535 931.7 0 ref|XM_005894272.1| PREDICTED: Bos mutus prola ( 890) [f] 4389 902.0 0 gi|BC148124.1| Bos taurus prolactin, mRNA (cDN ( 935) [f] 4369 897.9 0 ref|XM_006072861.1| PREDICTED: Bubalus bubalis ( 914) [f] 4299 883.7 0 ref|XM_005976860.1| PREDICTED: Pantholops hodg ( 905) [f] 4251 873.9 0 ref|NM_001290885.1| Bubalus bubalis prolactin- ( 862) [f] 4163 856.1 0 gi|X13483.1| Sheep mRNA for lactogenic polypep ( 880) [f] 4110 845.3 0 gi|X76050.1| O.aries ovine mammary gland prola ( 847) [f] 4032 829.4 0 gi|X76048.1| C.hircus caprine mammary gland pr ( 847) [f] 4029 828.8 0 ref|NM_001285547.1| Capra hircus PROLACTIN pro ( 845) [f] 4020 827.0 0 gi|X76049.1| C.hircus caprine pituitary gland ( 847) [f] 4020 827.0 0 gi|AY373035.1| Cervus elaphus preprolactin mRN ( 864) [f] 3999 822.7 0 ref|NM_001009306.1| Ovis aries prolactin (PRL) ( 926) [f] 3933 809.3 0 ref|XM_005976859.1| PREDICTED: Pantholops hodg ( 865) [f] 3859 794.2 0 ref|XM_004273529.1| PREDICTED: Orcinus orca pr ( 901) [f] 3320 684.6 5e-193 ref|XM_007116323.1| PREDICTED: Physeter catodo ( 896) [f] 3318 684.2 6.6e-193 ref|XM_007447055.1| PREDICTED: Lipotes vexilli ( 897) [f] 3311 682.8 1.8e-192 ref|XM_004317251.1| PREDICTED: Tursiops trunca ( 899) [f] 3301 680.7 7.3e-192 ref|XM_007197144.1| PREDICTED: Balaenoptera ac ( 894) [f] 3281 676.7 1.2e-190 ref|XM_007116322.1| PREDICTED: Physeter catodo ( 893) [f] 3274 675.3 3.3e-190 >>ref|NM_173953.2| Bos taurus prolactin (PRL (907 nt) initn: 4535 init1: 4535 opt: 4535 Z-score: 4974.6 bits: 931.7 E(25038865): 0 banded Smith-Waterman score: 4535; 100.0% identity (100.0% similar) in 907 nt overlap (1-907:1-907) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 50 60 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 70 80 90 100 110 120 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 130 140 150 160 170 180 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 190 200 210 220 230 240 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA 250 260 270 280 290 300 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA 310 320 330 340 350 360 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 370 380 390 400 410 420 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC 430 440 450 460 470 480 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 490 500 510 520 530 540 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 550 560 570 580 590 600 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT 610 620 630 640 650 660 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 670 680 690 700 710 720 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT 730 740 750 760 770 780 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT 790 800 810 820 830 840 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC 850 860 870 880 890 900 BOVPRL AAAATCT ::::::: ref|NM AAAATCT >>ref|XM_005894272.1| PREDICTED: Bos mutus (890 nt) initn: 3743 init1: 3743 opt: 4389 Z-score: 4814.3 bits: 902.0 E(25038865): 0 banded Smith-Waterman score: 4389; 99.3% identity (99.3% similar) in 891 nt overlap (14-904:1-890) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|XM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|XM TAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: ref|XM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTGCGGGGTATGAAAGGAGC 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: :::::: :::::: ref|XM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTTTCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: ref|XM AATGCATGCTTGGATCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC 830 840 850 860 870 880 BOVPRL AAAATCT :::: ref|XM AAAA 890 >>gi|BC148124.1| Bos taurus prolactin, mRNA (935 nt) initn: 3714 init1: 3714 opt: 4369 Z-score: 4791.8 bits: 897.9 E(25038865): 0 banded Smith-Waterman score: 4369; 99.3% identity (99.3% similar) in 887 nt overlap (18-904:2-887) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::::: gi|BC1 GATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|BC1 AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|BC1 TAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC ::::::::::::::::::::: :::::::::::::::::::: ::::::::::::::::: gi|BC1 GCGCTCCTGGAATGACCCTCTCTATCACCTAGTCACCGAGGTGCGGGGTATGAAAGGAGC 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|BC1 CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|BC1 TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|BC1 AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGAGTCTGTAGCGATGTC 830 840 850 860 870 880 BOVPRL AAAATCT :::: gi|BC1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA 890 900 910 920 930 >>ref|XM_006072861.1| PREDICTED: Bubalus bu (914 nt) initn: 3271 init1: 3271 opt: 4299 Z-score: 4715.1 bits: 883.7 E(25038865): 0 banded Smith-Waterman score: 4299; 98.0% identity (98.0% similar) in 897 nt overlap (14-907:17-912) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAAT :::::::::::::::::::::::::::::::::::::::::::: ref|XM CATTTGGGGAAGAGAAAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAAT 10 20 30 40 50 60 60 70 80 90 100 110 BOVPRL CATCACCACCATGGACAGCAAAGGTTCGTCGCAGAA---AGGGTCCCGCCTGCTCCTGCT :::::::::::::::::::::::::::::: ::::: ::::::: ::::::::::::: ref|XM CATCACCACCATGGACAGCAAAGGTTCGTCACAGAAAGCAGGGTCCTGCCTGCTCCTGCT 70 80 90 100 110 120 120 130 140 150 160 170 BOVPRL GCTGGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM GCTGGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAA 130 140 150 160 170 180 180 190 200 210 220 230 BOVPRL TGGGCCTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTC ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: ref|XM TGGGCCTGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTC 190 200 210 220 230 240 240 250 260 270 280 290 BOVPRL CCACTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CCACTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCA 250 260 270 280 290 300 300 310 320 330 340 350 BOVPRL GGGCAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM GGGCAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCC 310 320 330 340 350 360 360 370 380 390 400 410 BOVPRL GGAAGATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGG ::::: ::::::::::::::::::::::: ::::::::::::::::::::::::::::: ref|XM TGAAGACAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGG 370 380 390 400 410 420 420 430 440 450 460 470 BOVPRL GTTGCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAA :::::::::::::::::::::::::::::::::::::::::: ::::: ::::::::::: ref|XM GTTGCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAA 430 440 450 460 470 480 480 490 500 510 520 530 BOVPRL AGGAGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGGAGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACT 490 500 510 520 530 540 540 550 560 570 580 590 BOVPRL TCTGGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TCTGGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCC 550 560 570 580 590 600 600 610 620 630 640 650 BOVPRL CTACCCTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTC :::::::::::::::::::::::: ::::::::::::::::::::::: :: :::::::: ref|XM CTACCCTGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCGCGTTATTC 610 620 630 640 650 660 660 670 680 690 700 710 BOVPRL TGCTTTTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCT :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: ref|XM TGCTTTTTATAACCTGCTTCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCT 670 680 690 700 710 720 720 730 740 750 760 770 BOVPRL TAAGCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTA :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: ref|XM TAAGCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTA 730 740 750 760 770 780 790 800 810 820 830 BOVPRL TCCATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TCCATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAG 780 790 800 810 820 830 840 850 860 870 880 890 BOVPRL CTTTGTAATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGC ::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: ref|XM CTTTGTAATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTATAGA 840 850 860 870 880 890 900 BOVPRL GATGTCAAAATCT ::::::::::::: ref|XM GATGTCAAAATCTAA 900 910 >>ref|XM_005976860.1| PREDICTED: Pantholops (905 nt) initn: 3606 init1: 3606 opt: 4251 Z-score: 4662.5 bits: 873.9 E(25038865): 0 banded Smith-Waterman score: 4251; 97.4% identity (97.4% similar) in 894 nt overlap (14-907:11-903) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::: ::::::::::::::::::::::::::::::::::::::::::: ref|XM GGGAAGAGAAAGCTATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 50 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|XM CACCACCATGGACAGCAAAGGTTCATCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 60 70 80 90 100 110 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::: ::::::::::::::::::::::::::: ref|XM GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGCCTCCACCCCCGTCTGTCCCAATGGGCC 120 130 140 150 160 170 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: ref|XM TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 180 190 200 210 220 230 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::::::::::::::::::::: ::::::::::: ref|XM CATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCAA 240 250 260 270 280 290 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|XM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 300 310 320 330 340 350 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|XM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 360 370 380 390 400 410 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: ref|XM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 420 430 440 450 460 470 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 480 490 500 510 520 530 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 540 550 560 570 580 590 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: :: ::::::::::::::::::::::::::: :::::::::: ref|XM TGTGTGGTCAGGACTCCCATCTCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTT 600 610 620 630 640 650 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM TTACAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 660 670 680 690 700 710 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: ref|XM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 720 730 740 750 760 770 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ref|XM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 780 790 800 810 820 830 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC :::::::::::::::::::::::::::::::::::::::::::::::: ::: ::::: ref|XM AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCCATAGAAATGTC 840 850 860 870 880 890 BOVPRL AAAATCT ::::::: ref|XM AAAATCTAA 900 >>ref|NM_001290885.1| Bubalus bubalis prola (862 nt) initn: 3936 init1: 3646 opt: 4163 Z-score: 4566.2 bits: 856.1 E(25038865): 0 banded Smith-Waterman score: 4163; 98.4% identity (98.4% similar) in 865 nt overlap (9-873:1-862) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::: :::::::::::::::::::::::::::::::::::::::::: ref|NM TGAGGAGCC-TAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 50 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: ref|NM CACCACCATGGACAGCAAAGGTTCGTCACAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 60 70 80 90 100 110 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 120 130 140 150 160 170 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 180 190 200 210 220 230 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA 240 250 260 270 280 290 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|NM AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 300 310 320 330 340 350 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 360 370 380 390 400 410 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: ::::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGC 420 430 440 450 460 470 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATCCTACCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 480 490 500 510 520 530 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 540 550 560 570 580 590 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: ::::::::::::::::::::::: :: :::::::::::::: ref|NM TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCGCGTTATTCTGCTTT 600 610 620 630 640 650 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 660 670 680 690 700 710 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 720 730 740 750 760 770 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCT-GCAAACTTCTCTGAGCTTTATAGCTTTGT 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::::::::::::::::::::::: ref|NM AATGCATGCTTGGCTCTAATGGGTTTCATCTTA 830 840 850 860 BOVPRL AAAATCT >>gi|X13483.1| Sheep mRNA for lactogenic polypep (880 nt) initn: 3458 init1: 3458 opt: 4110 Z-score: 4507.8 bits: 845.3 E(25038865): 0 banded Smith-Waterman score: 4110; 97.5% identity (97.5% similar) in 864 nt overlap (44-907:2-864) 20 30 40 50 60 70 BOVPRL AGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCATCACCACCATGGAC :::::::::::::::::::::::::::::: gi|X13 CGTGTTTCTTGAAATCATCACCACCATGGAC 10 20 30 80 90 100 110 120 130 BOVPRL AGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTA ::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|X13 AGCAAAGGTTCAGCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTA 40 50 60 70 80 90 140 150 160 170 180 190 BOVPRL CTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCCTGGCAACTGCCAG :::::::: :::::::::::::::::::: :::::::::::::::::::::::::::::: gi|X13 CTCTTGTGTCAGGGTGTGGTCTCCACCCCTGTCTGTCCCAATGGGCCTGGCAACTGCCAG 100 110 120 130 140 150 200 210 220 230 240 250 BOVPRL GTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATGACCTC :: ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|X13 GTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATAACCTC 160 170 180 190 200 210 260 270 280 290 300 310 BOVPRL TCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAAAGGGTTCATTACC ::::::::::::::::: :::::::::::: ::::::::::::::::::::::::::::: gi|X13 TCCTCGGAAATGTTCAATGAATTTGATAAAAGGTATGCCCAGGGCAAAGGGTTCATTACC 220 230 240 250 260 270 320 330 340 350 360 370 BOVPRL ATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGATAAAGAACAAGCC :::::::::::::::::::: :::::::::::::::::::: ::::: :::::::::::: gi|X13 ATGGCCCTCAACAGCTGCCACACCTCCTCCCTTCCTACCCCTGAAGACAAAGAACAAGCC 280 290 300 310 320 330 380 390 400 410 420 430 BOVPRL CAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAAT ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|X13 CAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAAT 340 350 360 370 380 390 440 450 460 470 480 490 BOVPRL GACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGCCCCAGATGCTATC ::::::::::::::::::::::: ::::: :::::::::::::::: ::::::::::::: gi|X13 GACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGTCCCAGATGCTATC 400 410 420 430 440 450 500 510 520 530 540 550 BOVPRL CTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X13 CTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATG 460 470 480 490 500 510 560 570 580 590 600 610 BOVPRL ATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X13 ATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGA 520 530 540 550 560 570 620 630 640 650 660 670 BOVPRL CTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTTTTATAACCTGCTC ::::: :::::::::::::::::::::::::::::: ::::::::::::: ::::::::: gi|X13 CTCCCATCCCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTTTTACAACCTGCTC 580 590 600 610 620 630 680 690 700 710 720 730 BOVPRL CACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X13 CACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGA 640 650 660 670 680 690 740 750 760 770 780 790 BOVPRL ATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATTTCTGAGATGGTTC ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|X13 ATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATTTCTGAGATGGTTC 700 710 720 730 740 750 800 810 820 830 840 850 BOVPRL TTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGTAATGCATGCTTGG ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|X13 TTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTTAATGCATGCTTGG 760 770 780 790 800 810 860 870 880 890 900 BOVPRL CTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTCAAAATCT :::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|X13 CTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGAAATGTCAAAATCTAAAAAA 820 830 840 850 860 870 gi|X13 AAAAAAAAAA 880 >>gi|X76050.1| O.aries ovine mammary gland pro (847 nt) initn: 3572 init1: 3572 opt: 4032 Z-score: 4422.4 bits: 829.4 E(25038865): 0 banded Smith-Waterman score: 4032; 97.5% identity (97.5% similar) in 846 nt overlap (20-865:3-847) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::: gi|X76 GGAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|X76 CACCACCATGGACAGCAAAGGTTCAGCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: ::::::::::::::::: :: ::::::::::::::::: gi|X76 GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGTCTCCACTCCTGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|X76 TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|X76 CATCCATAACCTCTCCTCGGAAATGTTCAATGAATTTGATAAACGGTATGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::::::::::::::::::::::::::::::: :::::::::::::::::::: ::::: gi|X76 AGGGTTCATTACCATGGCCCTCAACAGCTGCCACACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::: :::::::::::::: ::::::::::::::::::::::::::::::::::: gi|X76 CAAAGAACANGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: gi|X76 GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: :::::::::::::::::::::::::::::: :::::::::: gi|X76 TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 TTACAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|X76 CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|X76 TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::::::::::::::: gi|X76 AATGCATGCTTGGCTCTAATGGGTT 830 840 >>gi|X76048.1| C.hircus caprine mammary gland (847 nt) initn: 3569 init1: 3569 opt: 4029 Z-score: 4419.1 bits: 828.8 E(25038865): 0 banded Smith-Waterman score: 4029; 97.5% identity (97.5% similar) in 846 nt overlap (20-865:3-847) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::: gi|X76 GGAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::: : :::::::::::::::::::::::::::::::: gi|X76 CACCACCATGGACAGCAAAGGTTCAGCACAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|X76 GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|X76 TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::: ::::::::::::::::: ::::::::::: gi|X76 CATCCATAACCTCTCCTCGGAAATGTTCAATGAATTTGATAAACGGTACGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::: :::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|X76 AGGGTACATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|X76 CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: gi|X76 GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: ::::::::::::::::::::::: :::::: :::::::::: gi|X76 TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCACGTCATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 TTACAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|X76 CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|X76 TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::::::::::::::: gi|X76 AATGCATGCTTGGCTCTAATGGGTT 830 840 >>ref|NM_001285547.1| Capra hircus PROLACTI (845 nt) initn: 3569 init1: 3569 opt: 4020 Z-score: 4409.3 bits: 827.0 E(25038865): 0 banded Smith-Waterman score: 4020; 97.4% identity (97.4% similar) in 846 nt overlap (20-865:1-845) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::: ref|NM AGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: ref|NM CACCACCATGGACAGCAAAGGTTCAGCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::: ::::::::::::::::: ::::::::::: ref|NM CATCCATAACCTCTCCTCGGAAATGTTCAATGAATTTGATAAACGGTACGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::: :::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|NM AGGGTACATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTGGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: ::::::::::::::::::::::: :::::: :::::::::: ref|NM TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCACGTCATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTACAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC :::::::::::::::::::::: :: ref|NM AATGCATGCTTGGCTCTAATGGTTT 830 840 >>gi|X76049.1| C.hircus caprine pituitary glan (847 nt) initn: 3569 init1: 3569 opt: 4020 Z-score: 4409.2 bits: 827.0 E(25038865): 0 banded Smith-Waterman score: 4020; 97.4% identity (97.4% similar) in 846 nt overlap (20-865:3-847) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT ::::::::::::::::::::::::::::::::::::::::: gi|X76 GGAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|X76 CACCACCATGGACAGCAAAGGTTCAGCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|X76 GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|X76 TGGCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::: ::::::::::::::::: ::::::::::: gi|X76 CATCCATAACCTCTCCTCGGAAATGTTCAATGAATTTGATAAACGGTACGCCCAGGGCAA 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::: :::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|X76 AGGGTACATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|X76 CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: gi|X76 GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|X76 AGGCATGGAGATGATATTGGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: ::::::::::::::::::::::: :::::: :::::::::: gi|X76 TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGAGGCACGTCATTCTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|X76 TTACAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|X76 CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|X76 TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 770 780 790 800 810 820 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC :::::::::::::::::::::: :: gi|X76 AATGCATGCTTGGCTCTAATGGTTT 830 840 >>gi|AY373035.1| Cervus elaphus preprolactin (864 nt) initn: 3438 init1: 3367 opt: 3999 Z-score: 4386.0 bits: 822.7 E(25038865): 0 banded Smith-Waterman score: 3999; 96.7% identity (96.7% similar) in 855 nt overlap (53-907:1-852) 30 40 50 60 70 80 BOVPRL ACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCATCACCACCATGGACAGCAAAGGT :::::::::::: ::::::::::::::: : gi|AY3 GAAATCATCACCGCCATGGACAGCAAAGTT 10 20 30 90 100 110 120 130 140 BOVPRL TCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTACTCTTGTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|AY3 TCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTACTCTTGTGC 40 50 60 70 80 90 150 160 170 180 190 200 BOVPRL CAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCCTGGCAACTGCCAGGTATCCCTT ::::::::::::::::: :: ::::::::::::::: :::::::::::::::: :::::: gi|AY3 CAGGGTGTGGTCTCCACTCCTGTCTGTCCCAATGGGGCTGGCAACTGCCAGGTGTCCCTT 100 110 120 130 140 150 210 220 230 240 250 260 BOVPRL CGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATGACCTCTCCTCGGAA ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|AY3 CGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATAACCTCTCCTCGGAA 160 170 180 190 200 210 270 280 290 300 310 320 BOVPRL ATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAAAGGGTTCATTACCATGGCCCTC :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|AY3 ATGTTCAACGAATTTGATAAACGGTATGCCCAAGGCAAAGGGTTCATTACCATGGCCCTC 220 230 240 250 260 270 330 340 350 360 370 380 BOVPRL AACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGATAAAGAACAAGCCCAACAGACC :::::::::::::::::::::::::::::::: ::::: ::::::::::::::::::::: gi|AY3 AACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGACAAAGAACAAGCCCAACAGACC 280 290 300 310 320 330 390 400 410 420 430 440 BOVPRL CATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAATGACCCTCTG :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|AY3 CACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAATGACCCTCTG 340 350 360 370 380 390 450 460 470 480 490 500 BOVPRL TATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGCCCCAGATGCTATCCTATCGAGG :::::::::::::: ::::: ::::::::::::::::::::::::: :::::: :::::: gi|AY3 TATCACCTAGTCACGGAGGTGCGGGGTATGAAAGGAGCCCCAGATGGTATCCTGTCGAGG 400 410 420 430 440 450 510 520 530 540 550 560 BOVPRL GCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATGATATTTGGC ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|AY3 GCCATAGAGATTGAGGAAGAAAACAAACGGCTTCTGGAAGGCATGGAGATGATATTTGGC 460 470 480 490 500 510 570 580 590 600 610 620 BOVPRL CAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGACTCCCGTCC ::::: ::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|AY3 CAGGTACTTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGACTCCCTTCC 520 530 540 550 560 570 630 640 650 660 670 680 BOVPRL CTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTTTTATAACCTGCTCCACTGCCTG :::::::: :::::::::::::: ::::::::::::::::::::: :::::::::::::: gi|AY3 CTGCAAACCAAGGATGAAGATGCGCGTTATTCTGCTTTTTATAACTTGCTCCACTGCCTG 580 590 600 610 620 630 690 700 710 720 730 740 BOVPRL CGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGAATCATCTAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|AY3 CGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGAATCATCTAC 640 650 660 670 680 690 750 760 770 780 790 800 BOVPRL AACAACAACTGCTAAGCCCACATTCCATCCTATCCATTTCTGAGATGGTTCTTAATGATC :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|AY3 AACAACAACTGCTAAGCCCACA-TCCATCCTATCCATTTCTGAGATGGTTCTTAATGATC 700 710 720 730 740 810 820 830 840 850 860 BOVPRL CATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGTAATGCATGCTTGGCTCTAATGG :::::::::::::::::::::::::::::::::::: ::::::::::::::::: ::::: gi|AY3 CATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTTAATGCATGCTTGGCTCCAATGG 750 760 770 780 790 800 870 880 890 900 BOVPRL GTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTCAAAATCT ::::::::::::::::::::::: :::::: ::::::::::::: gi|AY3 GTTTCATCTTAAATAAAAACAGA--CTGTAGAGATGTCAAAATCTAAAAAAAAAAAA 810 820 830 840 850 860 >>ref|NM_001009306.1| Ovis aries prolactin ( (926 nt) initn: 3886 init1: 3886 opt: 3933 Z-score: 4312.7 bits: 809.3 E(25038865): 0 banded Smith-Waterman score: 3933; 94.8% identity (94.8% similar) in 870 nt overlap (31-900:58-926) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT : : ::::: : :::: :::: ref|NM AAACACACTTTCTGCGCTGAACCTTTGCTGTCCATGGTGGTGATGATTTCAAGAAACACA 30 40 50 60 70 80 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT : ::::: ::::::::::::::: :::::::::::::::::::::::::::::::::: ref|NM CTTCACCA-GGACAGCAAAGGTTCAGCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT 90 100 110 120 130 140 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC ::::::::::::::::::::: :::::::::::::::::::: ::::::::::::::::: ref|NM GGTGTCAAATCTACTCTTGTGTCAGGGTGTGGTCTCCACCCCTGTCTGTCCCAATGGGCC 150 160 170 180 190 200 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :::: :::: ::::: :::::::::::::::::::::::::::::::::::::::::::: ref|NM TGGCGACTGTCAGGTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA 210 220 230 240 250 260 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::: ::: :::::::::::::::::::::: :::::::::::: :::::::::::::::: ref|NM CATTCATAACCTCTCCTCGGAAATGTTCAATGAATTTGATAAAAGGTATGCCCAGGGCAA 270 280 290 300 310 320 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA ::::::::::::::::::::::::::::::::: :::::::::::::::::::: ::::: ref|NM AGGGTTCATTACCATGGCCCTCAACAGCTGCCACACCTCCTCCCTTCCTACCCCTGAAGA 330 340 350 360 370 380 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CAAAGAACAAGCCCAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT 390 400 410 420 430 440 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::::::::::::::::::::::::::::::::: ::::: :::::::::::::::: ref|NM GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGT 450 460 470 480 490 500 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::: ::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM CCCAGATGCTATTCTATCGAGGGCTATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA 510 520 530 540 550 560 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: ref|NM AGGCATGGAGATGATATTTGGCCAAGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC 570 580 590 600 610 620 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::::::::::::: :::::::::::::::::::::::::::::: :::::::::: ref|NM TGTGTGGTCAGGACTCCCATCCCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTT 630 640 650 660 670 680 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::: :::::::: ::::::::::::::::::::::::::::::::::::::::::::::: ref|NM TTACAACCTGCTTCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT 690 700 710 720 730 740 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|NM CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT 750 760 770 780 790 800 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ref|NM TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTT 810 820 830 840 850 860 850 860 870 880 890 900 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTC ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|NM AATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGAAATGTC 870 880 890 900 910 920 BOVPRL AAAATCT >>ref|XM_005976859.1| PREDICTED: Pantholops (865 nt) initn: 3225 init1: 3225 opt: 3859 Z-score: 4232.1 bits: 794.2 E(25038865): 0 banded Smith-Waterman score: 4017; 96.4% identity (96.4% similar) in 864 nt overlap (53-907:1-863) 30 40 50 60 70 80 BOVPRL ACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCATCACCACCATGGACAGCAAAGGT :::::::::::::::::::::::::::::: ref|XM GAAATCATCACCACCATGGACAGCAAAGGT 10 20 30 90 100 110 120 130 BOVPRL TCGTCGCAGAAAG---------GGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTA :: :::::::::: :::::::::::::::::::::::::::::::::::::: ref|XM TCATCGCAGAAAGGTATGTACAGGTCCCGCCTGCTCCTGCTGCTGGTGGTGTCAAATCTA 40 50 60 70 80 90 140 150 160 170 180 190 BOVPRL CTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCCTGGCAACTGCCAG :::::::: :::::::::: :::::::::::::::::::::::::::::::::::::::: ref|XM CTCTTGTGTCAGGGTGTGGCCTCCACCCCCGTCTGTCCCAATGGGCCTGGCAACTGCCAG 100 110 120 130 140 150 200 210 220 230 240 250 BOVPRL GTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATGACCTC :: ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: ref|XM GTGTCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTACATCCATAACCTC 160 170 180 190 200 210 260 270 280 290 300 310 BOVPRL TCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAAAGGGTTCATTACC ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: ref|XM TCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCAAAGGGTTCATTACC 220 230 240 250 260 270 320 330 340 350 360 370 BOVPRL ATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGATAAAGAACAAGCC ::::::::::::::::::::::::::::::::::::::::: ::::: :::::::::::: ref|XM ATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCTGAAGACAAAGAACAAGCC 280 290 300 310 320 330 380 390 400 410 420 430 BOVPRL CAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAAT ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CAACAGACCCACCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCTGCGCTCCTGGAAT 340 350 360 370 380 390 440 450 460 470 480 490 BOVPRL GACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGCCCCAGATGCTATC ::::::::::::::::::::::: ::::: :::::::::::::::: ::::::::::::: ref|XM GACCCTCTGTATCACCTAGTCACAGAGGTGCGGGGTATGAAAGGAGTCCCAGATGCTATC 400 410 420 430 440 450 500 510 520 530 540 550 BOVPRL CTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGAAGGCATGGAGATG 460 470 480 490 500 510 560 570 580 590 600 610 BOVPRL ATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM ATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCCTGTGTGGTCAGGA 520 530 540 550 560 570 620 630 640 650 660 670 BOVPRL CTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTTTTATAACCTGCTC ::::: :: ::::::::::::::::::::::::::: ::::::::::::: ::::::::: ref|XM CTCCCATCTCTGCAAACTAAGGATGAAGATGCACGTCATTCTGCTTTTTACAACCTGCTC 580 590 600 610 620 630 680 690 700 710 720 730 BOVPRL CACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ref|XM CACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCTCCTGAATTGCAGA 640 650 660 670 680 690 740 750 760 770 780 790 BOVPRL ATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATTTCTGAGATGGTTC ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: ref|XM ATCATCTACAACAACAACTGCTAAGCCCACATT-CATCCTATCCATTTCTGAGATGGTTC 700 710 720 730 740 800 810 820 830 840 850 BOVPRL TTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGTAATGCATGCTTGG ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: ref|XM TTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTTTAATGCATGCTTGG 750 760 770 780 790 800 860 870 880 890 900 BOVPRL CTCTAATGGGTTTCATCTTAAATAAAAACAGACTCTGTAGCGATGTCAAAATCT ::::::::::::::::::::::::::::::::::: ::: :::::::::::: ref|XM CTCTAATGGGTTTCATCTTAAATAAAAACAGACTCCATAGAAATGTCAAAATCTAA 810 820 830 840 850 860 >>ref|XM_004273529.1| PREDICTED: Orcinus or (901 nt) initn: 3176 init1: 2809 opt: 3320 Z-score: 3639.3 bits: 684.6 E(25038865): 5e-193 banded Smith-Waterman score: 3320; 86.4% identity (86.4% similar) in 889 nt overlap (23-907:12-899) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM GCTGTAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: :::::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTGCTCTTGTGCAAGAGTGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :: ::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCTCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGCGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTGTACCACCTGGTCACTGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::: ::::::::::: :: :::::::::::::::::: : :::::::::::::: : ref|XM CCCCAGAGGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::::: ref|XM CGGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::::::::: ::: ::::::::::::::::: :::: : :: ::: ref|XM TCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-GCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::::::::::::::::::::: :: : ::: ::::: : :: ::::::::::: ref|XM TTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : :::::::: ::::::: :::::::::::::::: :: :: ref|XM TAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGAGA 830 840 850 860 870 880 900 BOVPRL TGTCAAAATCT ::::::::::: ref|XM TGTCAAAATCTAA 890 900 >>ref|XM_007116323.1| PREDICTED: Physeter c (896 nt) initn: 3172 init1: 2805 opt: 3318 Z-score: 3637.1 bits: 684.2 E(25038865): 6.6e-193 banded Smith-Waterman score: 3318; 86.3% identity (86.3% similar) in 888 nt overlap (23-907:8-894) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT :: ::: :: :::::::::::::::: : :::::::: ref|XM TAGGACTACCAGATCTCTCTGGTGAAGTGTGTTTTTCGAAATCAT 10 20 30 40 70 80 90 100 110 120 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGGT :::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: : ref|XM CACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGCT 50 60 70 80 90 100 130 140 150 160 170 180 BOVPRL GGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGCC : :::::::::: ::::::::: :: : :::: :::: ::: ::::::::: ::: : ref|XM GATGTCAAATCTGCTCTTGTGCAAGAGCGTGGCCTCCCTTCCCATCTGTCCCAGCGGGGC 110 120 130 140 150 160 190 200 210 220 230 240 BOVPRL TGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACTA :: :::::::::::: ::::::::::::::::::::::: :::::::: :::::::::: ref|XM TGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACTA 170 180 190 200 210 220 250 260 270 280 290 300 BOVPRL CATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCAA ::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM CATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCAG 230 240 250 260 270 280 310 320 330 340 350 360 BOVPRL AGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAGA :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: ::::: ref|XM AGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAGA 290 300 310 320 330 340 370 380 390 400 410 420 BOVPRL TAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGCT :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: :::: ref|XM CAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGAGTGCT 350 360 370 380 390 400 430 440 450 460 470 480 BOVPRL GCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAGC :::::: ::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: ::: ref|XM GCGCTCTTGGAATGACCCTCTGTACCACCTGGTCACGGAGGTGCGGGGTATGCAAGAAGC 410 420 430 440 450 460 490 500 510 520 530 540 BOVPRL CCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGGA :::::::::::::::::: :: :::::::::::::::::: : :::::::::::::: :: ref|XM CCCAGATGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAGA 470 480 490 500 510 520 550 560 570 580 590 600 BOVPRL AGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACCC ::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: : ref|XM AGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACTC 530 540 550 560 570 580 610 620 630 640 650 660 BOVPRL TGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTTT :::::::: ::::: :: :::::::: : ::::::::: : :: :: :::::: ref|XM CGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTTT 590 600 610 620 630 640 670 680 690 700 710 720 BOVPRL TTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGCT ::::::::::::::::::::: :::::::::::: :::::::::: ::: :: ::::: ref|XM TTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGCT 650 660 670 680 690 700 730 740 750 760 770 780 BOVPRL CCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCATT :::::: ::: ::::::::::: ::: ::::::::::::::::: ::::: : :: :::: ref|XM CCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-TCCATTCCATTCATT 710 720 730 740 750 760 790 800 810 820 830 840 BOVPRL TCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTGT ::::::::::::::::::::::::: :: : ::: ::::: : :: ::::::::::: : ref|XM TCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTTT 770 780 790 800 810 820 850 860 870 880 890 BOVPRL AATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGAT ::::::::::::: : :::::::: ::::::: :::::::::::::::: :: ::: ref|XM AATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGAGAT 830 840 850 860 870 880 900 BOVPRL GTCAAAATCT :::::::::: ref|XM GTCAAAATCTAA 890 >>ref|XM_007447055.1| PREDICTED: Lipotes ve (897 nt) initn: 3157 init1: 2799 opt: 3311 Z-score: 3629.4 bits: 682.8 E(25038865): 1.8e-192 banded Smith-Waterman score: 3311; 86.3% identity (86.3% similar) in 889 nt overlap (23-907:8-895) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM TAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: :::::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTGCTCTTGTGCAAGAGTGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGCGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG :::::::::::::::::::::: :: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTCTACCACCTGGTCACTGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::::::::::::::: :: :::::::::::::::::: : :::::::::::::: : ref|XM CCCCAGATGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::::: ref|XM CCGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::: ::::: ::: ::::::::::::::: : ::::: : :: ::: ref|XM TCCTGAAGTGCCGAATCGTCTACGACAGCAACTGCTAAGCCCATA-TCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::: ::::::::::::::::: :: : ::: ::::: : :: ::::::::::: ref|XM TTCTGAGACGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : :::::::: ::::::: :::::::::::::::: :: :: ref|XM TAATGCATGCTTGGGTATAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGAGA 830 840 850 860 870 880 900 BOVPRL TGTCAAAATCT ::::::::::: ref|XM TGTCAAAATCTAA 890 >>ref|XM_004317251.1| PREDICTED: Tursiops t (899 nt) initn: 2817 init1: 2817 opt: 3301 Z-score: 3618.4 bits: 680.7 E(25038865): 7.3e-192 banded Smith-Waterman score: 3301; 86.2% identity (86.2% similar) in 887 nt overlap (23-907:12-897) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM GCTGTAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::: ::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAACAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: :::::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTGCTCTTGTGCAAGAGTGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGCGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTGTACCACCTGGTCACTGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::: :::::::::: :: :::::::::::::::::: : :::::::::::::: : ref|XM CCCCAGAGTCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTAG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::::: ref|XM CGGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::::::::: ::: ::::::::::::::::: :::: : :: ::: ref|XM TCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-GCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::::::::::::::::::::: :: : ::: ::::: : :: ::::::::::: ref|XM TTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTTAAATAA-AAACAGACTCTGTAGCGATG ::::::::::::: : :::::::: :::::::::: :: ::: :::::: :: :::: ref|XM GAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAAGACTCCACAGAGATG 830 840 850 860 870 880 900 BOVPRL TCAAAATCT ::::::::: ref|XM TCAAAATCTAA 890 >>ref|XM_007197144.1| PREDICTED: Balaenopte (894 nt) initn: 2990 init1: 2823 opt: 3281 Z-score: 3596.5 bits: 676.7 E(25038865): 1.2e-190 banded Smith-Waterman score: 3281; 86.1% identity (86.1% similar) in 889 nt overlap (23-907:8-892) 10 20 30 40 50 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTC-CTGGTGAAGTGTGTTTCTTGAAATCA :: ::: :::: :::::::::::::::: : ::::::: ref|XM TAGGACTACCAGATCTTCTCTGGTGAAGTGTGTTTTTCGAAATCA 10 20 30 40 60 70 80 90 100 110 BOVPRL TCACCACCATGGACAGCAAAGGTTCGTCGCAGAAAGGGTCCCGCCTGCTCCTGCTGCTGG ::::::::::::::::::::::::: :: ::::::::::: : ::::::::::::: :: ref|XM TCACCACCATGGACAGCAAAGGTTCATCACAGAAAGGGTCACTCCTGCTCCTGCTGTTGC 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL TGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGGGC ::::::::::::: ::::::::: :: : :::: :::: ::: ::::::::: ::: ref|XM TGGTGTCAAATCTCCTCTTGTGCAAGAGCGTGGCCTCCCTTCCCATCTGTCCCAGCGGGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL CTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCACT ::: :::::::::::: ::::::::::::::::::::::: :::::::: :::: :::: ref|XM CTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCTCACT 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL ACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGGCA :::::::: :::::::::::::::::::::::::::::::::::::::: :::::::::: ref|XM ACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGGCA 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL AAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGAAG :::::::::::::: :::: ::::::::::::: ::::::::::: : ::::: :::: ref|XM GAGGGTTCATTACCAAGGCCATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGAAG 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL ATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTTGC : :::::::::::::::::: :::::: ::::::::: ::::: :::: :: :: ::: ref|XM ACAAAGAACAAGCCCAACAGGTCCATCACGAAGTCCTTCTGAGCGTGATCCTGGGAGTGC 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL TGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGGAG ::::::::::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: :: ref|XM TGCGCTCCTGGAATGACCCTCTGTACCACCTGGTCACGGAGGTGCGGGGTATGCAAGAAG 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL CCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCTGG ::::::: ::::::::::: :: :::::::::::::::::: : :::::::::::::::: ref|XM CCCCAGACGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCTGG 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL AAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTACC :::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: :::: ref|XM AAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTACT 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGCTT : :::::::: ::::: ::::::::::: : ::::::::: : :: :: ::::: ref|XM CCGTGTGGTCGGGACTTCCGTCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGCTT 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAAGC :::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :::: ref|XM TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAAGC 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL TCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCCAT ::::::: ::: ::::::::::: ::: ::::::::::::::::: ::::: : :: ::: ref|XM TCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-TCCATTCCATTCAT 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL TTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTTTG :::::::::::::::::::::::::: :: : ::: ::: : :: :::::::::: ref|XM TTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGGCTT---TTAGTGTTATAGCTTTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGCGA :::::::::::::: : ::: ::: ::::::: :::::::::::::::: :: :: ref|XM TAATGCATGCTTGGGTGTAACGGGCCTCATCTTAAAAAATAAAAACAGACTCCACAGAGA 830 840 850 860 870 880 900 BOVPRL TGTCAAAATCT ::::::::::: ref|XM TGTCAAAATCTAA 890 >>ref|XM_007116322.1| PREDICTED: Physeter c (893 nt) initn: 2917 init1: 2550 opt: 3274 Z-score: 3588.8 bits: 675.3 E(25038865): 3.3e-190 banded Smith-Waterman score: 3274; 85.9% identity (85.9% similar) in 887 nt overlap (23-903:8-893) 10 20 30 40 50 60 BOVPRL TGCTTGGCTGAGGAGCCATAGGACGAGAGCTTCCTGGTGAAGTGTGTTTCTTGAAATCAT :: ::: :: :::::::::::::::: : :::::::: ref|XM TAGGACTACCAGATCTCTCTGGTGAAGTGTGTTTTTCGAAATCAT 10 20 30 40 70 80 90 100 110 BOVPRL CACCACCATGGACAGCAAAGGTTCGTCGCAGAA---AGGGTCCCGCCTGCTCCTGCTGCT :::::::::::::: ::::::::: :: ::::: :::::: : ::::::::::::: : ref|XM CACCACCATGGACAACAAAGGTTCATCACAGAAAGCAGGGTCACTCCTGCTCCTGCTGTT 50 60 70 80 90 100 120 130 140 150 160 170 BOVPRL GGTGGTGTCAAATCTACTCTTGTGCCAGGGTGTGGTCTCCACCCCCGTCTGTCCCAATGG : :: :::::::::: ::::::::: :: : :::: :::: ::: ::::::::: :: ref|XM GCTGATGTCAAATCTGCTCTTGTGCAAGAGCGTGGCCTCCCTTCCCATCTGTCCCAGCGG 110 120 130 140 150 160 180 190 200 210 220 230 BOVPRL GCCTGGCAACTGCCAGGTATCCCTTCGAGACCTGTTTGACCGGGCAGTCATGGTGTCCCA : ::: :::::::::::: ::::::::::::::::::::::: :::::::: ::::::: ref|XM GGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTTGACCGCGCAGTCATCCTGTCCCA 170 180 190 200 210 220 240 250 260 270 280 290 BOVPRL CTACATCCATGACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTATGCCCAGGG :::::::::: :::::::::::::::::::::::::::::::::::::::: :::::::: ref|XM CTACATCCATAACCTCTCCTCGGAAATGTTCAACGAATTTGATAAACGGTACGCCCAGGG 230 240 250 260 270 280 300 310 320 330 340 350 BOVPRL CAAAGGGTTCATTACCATGGCCCTCAACAGCTGCCATACCTCCTCCCTTCCTACCCCGGA :: :::::::::::::: ::: ::::::::::::: ::::::::::: : ::::: :: ref|XM CAGAGGGTTCATTACCAAGGCTATCAACAGCTGCCACACCTCCTCCCTCTCCACCCCTGA 290 300 310 320 330 340 360 370 380 390 400 410 BOVPRL AGATAAAGAACAAGCCCAACAGACCCATCATGAAGTCCTTATGAGCTTGATTCTTGGGTT ::: :::::::::::::::::: :::::::::::::::: ::::: :::: ::::: : ref|XM AGACAAAGAACAAGCCCAACAGGTCCATCATGAAGTCCTTCTGAGCATGATCCTTGGAGT 350 360 370 380 390 400 420 430 440 450 460 470 BOVPRL GCTGCGCTCCTGGAATGACCCTCTGTATCACCTAGTCACCGAGGTACGGGGTATGAAAGG ::::::::: ::::::::::::::::: ::::: ::::: ::::: ::::::::: ::: ref|XM GCTGCGCTCTTGGAATGACCCTCTGTACCACCTGGTCACGGAGGTGCGGGGTATGCAAGA 410 420 430 440 450 460 480 490 500 510 520 530 BOVPRL AGCCCCAGATGCTATCCTATCGAGGGCCATAGAGATTGAGGAAGAAAACAAACGACTTCT ::::::::::::::::::::: :: :::::::::::::::::: : :::::::::::::: ref|XM AGCCCCAGATGCTATCCTATCAAGAGCCATAGAGATTGAGGAACAGAACAAACGACTTCT 470 480 490 500 510 520 540 550 560 570 580 590 BOVPRL GGAAGGCATGGAGATGATATTTGGCCAGGTTATTCCTGGAGCCAAAGAGACTGAGCCCTA ::::::::::::: :::: ::::::::::: :::::::: ::: :::: :::: ::: ref|XM AGAAGGCATGGAGAAGATAGTTGGCCAGGTTCATCCTGGAGTCAAGGAGAATGAGGTCTA 530 540 550 560 570 580 600 610 620 630 640 650 BOVPRL CCCTGTGTGGTCAGGACTCCCGTCCCTGCAAACTAAGGATGAAGATGCACGTTATTCTGC : : :::::::: ::::: :: :::::::: : ::::::::: : :: :: ::: ref|XM CTCCGTGTGGTCGGGACTTCCATCCCTGCAGATGGCCGATGAAGATACGCGCCTTTTTGC 590 600 610 620 630 640 660 670 680 690 700 710 BOVPRL TTTTTATAACCTGCTCCACTGCCTGCGCAGGGATTCAAGCAAGATTGACACTTACCTTAA :::::::::::::::::::::::: :::::::::::: :::::::::: ::: :: :: ref|XM TTTTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAGTTATCTCAA 650 660 670 680 690 700 720 730 740 750 760 770 BOVPRL GCTCCTGAATTGCAGAATCATCTACAACAACAACTGCTAAGCCCACATTCCATCCTATCC ::::::::: ::: ::::::::::: ::: ::::::::::::::::: ::::: : :: : ref|XM GCTCCTGAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACA-TCCATTCCATTC 710 720 730 740 750 760 780 790 800 810 820 830 BOVPRL ATTTCTGAGATGGTTCTTAATGATCCATTCCCTGGCAAACTTCTCTGAGCTTTATAGCTT :::::::::::::::::::::::::::: :: : ::: ::::: : :: :::::::::: ref|XM ATTTCTGAGATGGTTCTTAATGATCCATCCCATAGCAGTCTTCTTTTAGTTTTATAGCTT 770 780 790 800 810 820 840 850 860 870 880 890 BOVPRL TGTAATGCATGCTTGGCTCTAATGGGTTTCATCTT---AAATAAAAACAGACTCTGTAGC : :::::::::::::: : :::::::: ::::::: :::::::::::::::: :: ref|XM TTTAATGCATGCTTGGGTGTAATGGGTCTCATCTTAAAAAATAAAAACAGACTCCACAGA 830 840 850 860 870 880 900 BOVPRL GATGTCAAAATCT ::::::::: ref|XM GATGTCAAA 890 907 residues in 1 query sequences 67548548229 residues in 24864151 library sequences Tcomplib [36.3.6 Aug., 2014(preload9)] (64 proc in memory [7G]) start: Tue Sep 30 15:09:55 2014 done: Tue Sep 30 15:19:33 2014 Total Scan time: 6706.470 Total Display time: 0.570 Function used was FASTA [36.3.6 Aug., 2014(preload9)]