BLASTX 2.0.10 [Aug-26-1999]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|1347369|gb|G25137.1|G25137 human STS EST48004.
         (556 letters)

Database: Non-redundant SwissProt sequences
           82,258 sequences; 29,652,561 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P54103|ZRF1_MOUSE  ZUOTIN RELATED FACTOR-1                      87  3e-17
sp|P34454|YMA9_CAEEL  HYPOTHETICAL 31.6 KD PROTEIN F54F2.9 I...    42  0.001
sp|Q61712|MTJ1_MOUSE  DNAJ PROTEIN HOMOLOG MTJ1                    37  0.033
sp|P53745|YN8X_YEAST  HYPOTHETICAL 68.1 KD PROTEIN IN BIO3-F...    29  7.4

Query: 1   DLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAK 141
           DLQLLIKAVNLFPAG NSRW+VIANYMNIHSSSGVKRTAKDVI + +
Sbjct: 458 DLQLLIKAVNLFPAGRNSRWDVIANYMNIHSSSGVKRTAKDVISEVR 504



Query: 34  FPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKE 213
           +PAGT +RWE +   +N        R+A+DVI  A  ++++   +++D  K      ++ 
Sbjct: 159 YPAGTPNRWEQMGRVLN--------RSAEDVIAMAGKMKQM---KQEDYTKLLMTTIQQS 207

Query: 214 HGVVPQADNATPSERFXGPYTDFTPXTTEXQKLXEQALNTYPVNTXERWXXIAVAVPGRX 393
             V  ++++                 +   QK  E AL  YP  T ERW  I+  +  + 
Sbjct: 208 VPVEEKSED---------------DWSQAEQKAFETALQKYPKGTDERWERISEEIGSKT 252

Query: 394 KE 399
           K+
Sbjct: 253 KK 254



Query: 292 TTEXQKLXEQALNTYPVNTXERWXXIAVAVPGRXKE 399
           T   QKL E AL  YP    +RW  IA  VP + KE
Sbjct: 496 TQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKE 531



Query: 1   DLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQ 150
           DL  L +++  FP GT  RW+ IA+ +         R+  DV  KAK L+
Sbjct: 332 DLSQLTRSMVKFPGGTPGRWDKIAHELG--------RSVTDVTTKAKELK 373



Query: 52  SRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEHGVVPQ 231
           +RW+   +Y        V R+ KDV   ++SL  LD +QK     +A       H +   
Sbjct: 75  NRWKSFISY--------VTRSRKDVKTVSRSLSNLDLYQKCSKEIRADQDISLLHSI--- 123

Query: 232 ADNATPSERFXGPYTDFTPXTTEXQKLXEQALNTYPVNT 348
                  E    PY +FT   +      EQ+ N +PV+T
Sbjct: 124 -------ETKLFPYINFTALNS------EQSHNFWPVHT 149




  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 18, 1999  8:26 PM
  Number of letters in database: 29,652,561
  Number of sequences in database:  82,258
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23174157
Number of Sequences: 82258
Number of extensions: 387821
Number of successful extensions: 980
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 973
Number of HSP's gapped (non-prelim): 7
length of query: 185
length of database: 29,652,561
effective HSP length: 49
effective length of query: 135
effective length of database: 25,621,919
effective search space: 3458959065
effective search space used: 3458959065
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 62 (28.6 bits)