# Genetic Code Table
#
# Obtained from: http://www3.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi
#
#   Version 3.1 - 1995
#      Initial base data set from Andrzej Elzanowski (PIR/NCBI)
#      Addition of Alternative Yeast by J.Ostell at NCBI
#
# Differences from the Standard Code: 
# 
#            Code 12      Standard
# 
#  CUG       Ser          Leu
#        
# 
# Alternative Initiation Codons: 
# 
# CAG may be used in Candida albicans (Santos et al., 1993). 
# 
# Systematic Range: 
# 
# Endomycetales (yeasts): Candida albicans, Candida cylindracea, Candida
# melibiosica, Candida parapsilosis, and Candida rugosa (Ohama et al.,
# 1993). 
# 
# Comment: 
# 
# However, other yeast, including Saccharomyces cerevisiae, Candida azyma,
# Candida diversa, Candida magnoliae, Candida rugopelliculosa, Yarrowia
# lipolytica, and Zygoascus hellenicus, definitely use the standard
# (nuclear) code (Ohama et al., 1993). 


Genetic Code [12]
  
Alternative Yeast Nuclear

AAs  =   FFLLSSSSYY**CC*WLLLSPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG
Starts = -------------------M---------------M----------------------------
Base1  = TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
Base2  = TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
Base3  = TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG