/* @source nthseq application ** ** Get nth sequence in a file of sequences ** ** @author Copyright (C) Gary Williams (gwilliam@hgmp.mrc.ac.uk) ** 14 Sept 1999 - GWW - written ** @@ ** ** This program is free software; you can redistribute it and/or ** modify it under the terms of the GNU General Public License ** as published by the Free Software Foundation; either version 2 ** of the License, or (at your option) any later version. ** ** This program is distributed in the hope that it will be useful, ** but WITHOUT ANY WARRANTY; without even the implied warranty of ** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ** GNU General Public License for more details. ** ** You should have received a copy of the GNU General Public License ** along with this program; if not, write to the Free Software ** Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. ******************************************************************************/ #include "emboss.h" /* @prog nthseq *************************************************************** ** ** Writes only one sequence from a multiple set of sequences ** ******************************************************************************/ int main(int argc, char **argv) { AjPSeqall seqall; AjPSeqout seqout; AjPSeq seq = NULL; ajint n; ajint count; embInit("nthseq", argc, argv); seqall = ajAcdGetSeqall("sequence"); n = ajAcdGetInt("number"); seqout = ajAcdGetSeqout("outseq"); count = 0; while(ajSeqallNext(seqall, &seq)) if(++count == n) break; if(count != n) ajErr("No such sequence - only %d sequences were input.", count); else ajSeqoutWriteSeq(seqout, seq); ajSeqoutClose(seqout); ajSeqallDel(&seqall); ajSeqDel(&seq); ajSeqoutDel(&seqout); embExit(); return 0; }