/*****************************************************************************
#   Copyright (C) 1994-2008 by David Gordon.
#   All rights reserved.                           
#                                                                           
#   This software is part of a beta-test version of the Consed/Autofinish
#   package.  It should not be redistributed or
#   used for any commercial purpose, including commercially funded
#   sequencing, without written permission from the author and the
#   University of Washington.
#   
#   This software is provided ``AS IS'' and any express or implied
#   warranties, including, but not limited to, the implied warranties of
#   merchantability and fitness for a particular purpose, are disclaimed.
#   In no event shall the authors or the University of Washington be
#   liable for any direct, indirect, incidental, special, exemplary, or
#   consequential damages (including, but not limited to, procurement of
#   substitute goods or services; loss of use, data, or profits; or
#   business interruption) however caused and on any theory of liability,
#   whether in contract, strict liability, or tort (including negligence
#   or otherwise) arising in any way out of the use of this software, even
#   if advised of the possibility of such damage.
#
#   Building Consed from source is error prone and not simple which is
#   why I provide executables.  Due to time limitations I cannot
#   provide any assistance in building Consed.  Even if you do not
#   modify the source, you may introduce errors due to using a
#   different version of the compiler, a different version of motif,
#   different versions of other libraries than I used, etc.  For this
#   reason, if you discover Consed bugs, I can only offer help with
#   those bugs if you first reproduce those bugs with an executable
#   provided by me--not an executable you have built.
# 
#   Modifying Consed is also difficult.  Although Consed is modular,
#   some modules are used by many other modules.  Thus making a change
#   in one place can have unforeseen effects on many other features.
#   It may takes months for you to notice these other side-effects
#   which may not seen connected at all.  It is not feasable for me to
#   provide help with modifying Consed sources because of the
#   potentially huge amount of time involved.
#
#*****************************************************************************/
//
// ostream_overloads.cpp
//
// because of yet another bug in DEC C++, the ostream overloads
// cannot be inlined.  e.g.
//
//   foo.cxx:15: error: In this declaration, "operator <<" is declared 
//                      with both internal and external linkage.
//   Compilation terminated with errors. 
//
// Sooo, they're all collected here.
//
// chrisa 16-mar-95
//




#include <Xm/Xm.h>

#include "quality.h"
#include "ntide.h"
#include "basesegment.h"




//
// Motif XmStrings  - useful for debugging
//
ostream& operator << (ostream& os, XmString& xms) {

   // get string value of XmString from toolkit
   char* szTemp;
   XmStringGetLtoR(xms, XmSTRING_DEFAULT_CHARSET, &szTemp);

   // insert translated string into ostream
   os << szTemp;

   // free the memory allocated by the toolkit
   XtFree(szTemp);

   // pass it to the ostream and return
   return os;
}

//
// base segment object
//
ostream& operator << (ostream& os, const BaseSegment& bs) {
   os << "<BaseSegment Read=" << bs.pLocFrag_->soGetFragmentName() 
       << " StartInCons=" << bs.nStartInConsensus_
         << " EndInCons=" << bs.nEndInConsensus_  << '>'
           << endl;

   return os;
}


//
// base segment changes struct
//
ostream& operator << (ostream& os, const BaseSegChanges& bsc) {
   int n;

   os << "Inserted base segments:" << endl;
   for (n = 0; n < bsc.daInsertedBaseSegs_.length(); n++) {
      os << n << ": " << bsc.daInsertedBaseSegs_[n];
   }
   os << "Removed base segments:" << endl;
   for (n = 0; n < bsc.daRemovedBaseSegs_.length(); n++) {
      os << n << ": " << bsc.daRemovedBaseSegs_[n];
   }

   return os;
}